| http://purl.uniprot.org/unirules/MF_01703#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:623363 up:source unirule:MF_01703 .
_:623364 up:source unirule:MF_01703 .
_:623365 up:source unirule:MF_01703 .
_:623366 up:source unirule:MF_01703 .
_:623367 up:source unirule:MF_01703 .
_:623368 up:source unirule:MF_01703 .
_:623369 up:source unirule:MF_01703 .
_:623370 up:source unirule:MF_01703 .
_:623371 up:source unirule:MF_01703 .
_:623372 up:source unirule:MF_01703 .
_:623373 up:source unirule:MF_01703 .
_:623374 up:source unirule:MF_01703 .
_:623375 up:source unirule:MF_01703 .
_:623376 up:source unirule:MF_01703 .
_:623377 up:source unirule:MF_01703 .
_:623378 up:source unirule:MF_01703 .
_:623379 up:source unirule:MF_01703 .
_:623380 up:source unirule:MF_01703 .
_:623381 up:source unirule:MF_01703 .
_:623382 up:source unirule:MF_01703 .
_:623383 up:source unirule:MF_01703 .
_:623384 up:source unirule:MF_01703 .
_:623385 up:source unirule:MF_01703 .
_:623386 up:source unirule:MF_01703 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation8 ;
up:classifiedWith GO:0006869 ,
GO:0034040 ,
keyword:1003 ,
keyword:1133 ,
keyword:1278 ,
keyword:445 ,
keyword:472 ,
keyword:547 ,
keyword:67 ,
keyword:812 ,
keyword:813 ;
up:recommendedName ?name0 .
?name0 up:ecName '7.5.2.6' ;
up:fullName 'ATP-dependent lipid A-core flippase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Lipid A export ATP-binding/permease protein MsbA' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'msbA' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Involved in lipopolysaccharide (LPS) biosynthesis. Translocates lipid A-core from the inner to the outer leaflet of the inner membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:enzymeClass .
?annotation6 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation7 a up:Domain_Annotation ;
rdfs:comment 'In MsbA the ATP-binding domain (NBD) and the transmembrane domain (TMD) are fused.' .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family.' .
?case9 up:classifiedWith GO:0005886 .
?case10 up:classifiedWith keyword:997 .
?sam12 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane13 faldo:begin ?transmembraneb14 ;
faldo:end ?transmembranee15 .
?transmembraneb14 faldo:position ?transmembranebp16 .
?transmembranee15 faldo:position ?transmembraneep17 .
?keyword18 up:range ?transmembrane13 .
?keyword19 up:range ?transmembrane13 .
?keyword20 up:range ?transmembrane13 .
_:623387 a rdf:Statement ;
up:attribution _:623363 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:623388 a rdf:Statement ;
up:attribution _:623364 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:623389 a rdf:Statement ;
up:attribution _:623365 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:623390 a rdf:Statement ;
up:attribution _:623366 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:623391 a rdf:Statement ;
up:attribution _:623367 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:623392 a rdf:Statement ;
up:attribution _:623368 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:623393 a rdf:Statement ;
up:attribution _:623369 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:623394 a rdf:Statement ;
up:attribution _:623370 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:623395 a rdf:Statement ;
up:attribution _:623371 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006869 .
_:623396 a rdf:Statement ;
up:attribution _:623372 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034040 .
_:623397 a rdf:Statement ;
up:attribution _:623373 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:623398 a rdf:Statement ;
up:attribution _:623374 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:623399 a rdf:Statement ;
up:attribution _:623375 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1278 .
_:623400 a rdf:Statement ;
up:attribution _:623376 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:445 .
_:623401 a rdf:Statement ;
up:attribution _:623377 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:623402 a rdf:Statement ;
up:attribution _:623378 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:623403 a rdf:Statement ;
up:attribution _:623379 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:623404 a rdf:Statement ;
up:attribution _:623380 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:623405 a rdf:Statement ;
up:attribution _:623381 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:813 .
_:623406 a rdf:Statement ;
up:attribution _:623382 ;
rdf:subject ?case9 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:623407 a rdf:Statement ;
up:attribution _:623383 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:623408 a rdf:Statement ;
up:attribution _:623384 ;
rdf:subject ?sam12 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:623409 a rdf:Statement ;
up:attribution _:623385 ;
rdf:subject ?sam12 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:623410 a rdf:Statement ;
up:attribution _:623386 ;
rdf:subject ?sam12 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01703
#Rule MF_01703 Created by:? on:2007-03-26 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso prosite:PS51239 .
?thisOrganism rdfs:subClassOf+ taxon:1224 .
BIND(URI(CONCAT(STR(?this), '#MF_01703a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a8')) AS ?annotation8) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(?this AS ?case9) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome .
} UNION {
?this up:proteome ?p21 .
?p21 skos:narrower .
}
BIND(?this AS ?case10) .
}
OPTIONAL {
?this a up:Protein .
{
FILTER (! (EXISTS {
{
?this up:proteome .
} UNION {
?this up:proteome ?p22 .
?p22 skos:narrower .
}
})) .
} UNION {
{
?this up:proteome .
} UNION {
?this up:proteome ?p23 .
?p23 skos:narrower .
}
}
BIND(?this AS ?case11) .
}
OPTIONAL {
?this up:annotation ?samtransmembrane24 ;
up:sequence ?thisSequence .
?samtransmembrane24 up:range ?samtransmembraner25 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner25 faldo:begin ?samtransmembraneb26 ;
faldo:end ?samtransmembranee27 .
?samtransmembraneb26 faldo:position ?samtransmembranebp28 ;
faldo:reference ?thisSequence .
?samtransmembranee27 faldo:position ?samtransmembraneep29 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam12) .
}
BIND(URI(CONCAT(STR(?this), '#MF_01703a18')) AS ?keyword18) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a19')) AS ?keyword19) .
BIND(URI(CONCAT(STR(?this), '#MF_01703a20')) AS ?keyword20) .
}
"xsd:string |
