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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-11 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-17 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-44 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-29 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-87 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_01813#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01813#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_01813#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01813#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01813#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01813#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01813#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01813#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:635476 up:source unirule:MF_01813 . _:635477 up:source unirule:MF_01813 . _:635478 up:source unirule:MF_01813 . _:635479 up:source unirule:MF_01813 . _:635480 up:source unirule:MF_01813 . _:635481 up:source unirule:MF_01813 . _:635482 up:source unirule:MF_01813 . _:635483 up:source unirule:MF_01813 . _:635484 up:source unirule:MF_01813 . _:635485 up:source unirule:MF_01813 . _:635486 up:source unirule:MF_01813 . _:635487 up:source unirule:MF_01813 . _:635488 up:source unirule:MF_01813 . _:635489 up:source unirule:MF_01813 . _:635490 up:source unirule:MF_01813 . _:635491 up:source unirule:MF_01813 . _:635492 up:source unirule:MF_01813 . _:635493 up:source unirule:MF_01813 . _:635494 up:source unirule:MF_01813 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0009234 , GO:0043770 , keyword:474 , keyword:489 , keyword:808 , keyword:949 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.' . ?case1 up:alternativeName ?name3 , ?name4 ; up:classifiedWith GO:0006744 , GO:0008425 , GO:0009060 , keyword:831 ; up:recommendedName ?name2 . ?name2 up:ecName '2.1.1.163' , '2.1.1.201' ; up:fullName 'Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE' ; rdf:type up:Structured_Name . ?name3 up:fullName '2-methoxy-6-polyprenyl-1,4-benzoquinol methylase' ; rdf:type up:Structured_Name . ?name4 up:fullName 'Demethylmenaquinone methyltransferase' ; rdf:type up:Structured_Name . ?case5 up:recommendedName ?name6 . ?name6 up:ecName '2.1.1.163' ; up:fullName 'Demethylmenaquinone methyltransferase' ; rdf:type up:Structured_Name . ?pfs7 up:annotation ?annotation8 . ?annotation8 faldo:begin ?pfsb9 ; faldo:end ?pfse10 ; up:ligand ?ligand11 ; rdf:type up:Binding_Site_Annotation . ?pfsb9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?pfse10 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?ligand11 rdfs:subClassOf chebi:59789 . ?pfs14 up:annotation ?annotation15 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; up:ligand ?ligand18 ; rdf:type up:Binding_Site_Annotation . ?pfsb16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?ligand18 rdfs:subClassOf chebi:59789 . ?pfs21 up:annotation ?annotation22 . ?annotation22 faldo:begin ?pfsb23 ; faldo:end ?pfse24 ; up:ligand ?ligand25 ; rdf:type up:Binding_Site_Annotation . ?pfsb23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfse24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?ligand25 rdfs:subClassOf chebi:59789 . ?pfs28 up:annotation ?annotation29 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; up:ligand ?ligand32 ; rdf:type up:Binding_Site_Annotation . ?pfsb30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand32 rdfs:subClassOf chebi:59789 . _:635495 a rdf:Statement ; up:attribution _:635476 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:635496 a rdf:Statement ; up:attribution _:635477 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:474 . _:635497 a rdf:Statement ; up:attribution _:635478 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:949 . _:635498 a rdf:Statement ; up:attribution _:635479 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:635499 a rdf:Statement ; up:attribution _:635480 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:489 . _:635500 a rdf:Statement ; up:attribution _:635481 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043770 . _:635501 a rdf:Statement ; up:attribution _:635482 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0009234 . _:635502 a rdf:Statement ; up:attribution _:635483 ; rdf:subject ?case1 ; rdf:predicate up:recommendedName ; rdf:object ?name2 . _:635503 a rdf:Statement ; up:attribution _:635484 ; rdf:subject ?case1 ; rdf:predicate up:alternativeName ; rdf:object ?name3 . _:635504 a rdf:Statement ; up:attribution _:635485 ; rdf:subject ?case1 ; rdf:predicate up:alternativeName ; rdf:object ?name4 . _:635505 a rdf:Statement ; up:attribution _:635486 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:831 . _:635506 a rdf:Statement ; up:attribution _:635487 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008425 . _:635507 a rdf:Statement ; up:attribution _:635488 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0006744 . _:635508 a rdf:Statement ; up:attribution _:635489 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009060 . _:635509 a rdf:Statement ; up:attribution _:635490 ; rdf:subject ?case5 ; rdf:predicate up:recommendedName ; rdf:object ?name6 . _:635510 a rdf:Statement ; up:source unirule:MF_01813 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:635511 a rdf:Statement ; up:attribution _:635491 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:635512 a rdf:Statement ; up:source unirule:MF_01813 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:635513 a rdf:Statement ; up:attribution _:635492 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:635514 a rdf:Statement ; up:source unirule:MF_01813 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:635515 a rdf:Statement ; up:attribution _:635493 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:635516 a rdf:Statement ; up:source unirule:MF_01813 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:635517 a rdf:Statement ; up:attribution _:635494 ; rdf:subject ?pfs28 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01813 #Rule MF_01813 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-01-14 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_01982 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_01982 . })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33090 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_01982 . })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2 . FILTER (! (EXISTS { VALUES ?supertaxon35 {taxon:33090 taxon:1117} ?thisOrganism rdfs:subClassOf+ ?supertaxon35 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_01982 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_01982 . })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:33090 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . FILTER (! (EXISTS { ?this rdfs:seeAlso signature:MF_01982 . })) . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1117 . })) . } UNION { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01813 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . FILTER (! (EXISTS { VALUES ?supertaxon36 {taxon:33090 taxon:1117} ?thisOrganism rdfs:subClassOf+ ?supertaxon36 . })) . } BIND(URI(CONCAT(STR(?this), '#MF_01813a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch41 faldo:location ?templateMotifSequenceMatchRegionP4901742 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP4901744 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP49017MF_0181337 . ?templateMotifSequenceMatchRegionP4901742 faldo:begin ?templateMotifSequenceMatchBeginP4901743 . ?templateMotifSequenceMatchBeginP4901743 faldo:position ?templateMotifSequenceMatchBeginPositionP4901738 ; faldo:reference isoform:P49017-1 . ?templateMotifSequenceProfileAlignmentOperationP4901744 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . ?targetMotifMatch45 faldo:location ?targetMotifMatchRegionMatch46 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181348 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP49017MF_0181339 . ?targetMotifMatchRegionMatch46 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181347 . ?targetMotifMatchRegionMatchBeginMF_0181347 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181340 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181348 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP49017MF_0181337, 1, (STRLEN(?templateMotifCigarP49017MF_0181337) - STRLEN(REPLACE(?templateMotifCigarP49017MF_0181337, CONCAT('^(?:-*[^-]){', STR(((179 - ?templateMotifSequenceMatchBeginPositionP4901738) + 1)), '}'), '')))), '[a-z]', '')) AS ?step149) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP49017MF_0181339, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181339) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181339, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP49017MF_0181339, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181339) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181339, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), '')))), '[^-]', ''))) AS ?step250) . BIND(((?step250 + ?targetMotifMatchRegionMatchBeginPositionMF_0181340) - 1) AS ?thisPositionOn12) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP49017MF_0181337, 1, (STRLEN(?templateMotifCigarP49017MF_0181337) - STRLEN(REPLACE(?templateMotifCigarP49017MF_0181337, CONCAT('^(?:-*[^-]){', STR(((180 - ?templateMotifSequenceMatchBeginPositionP4901738) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP49017MF_0181339, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181339) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181339, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP49017MF_0181339, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181339) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181339, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0181340) - 1) AS ?thisPositionOn13) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb9) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse10) . FILTER (REGEX('[ND][ARNDCQEGHILKMFPSTWYVBZJUOX]', SUBSTR(?thisSequenceValue, ?thisPositionOn12, (?thisPositionOn13 - ?thisPositionOn12)))) . BIND(URI(CONCAT(STR(?this), '#MF_01813a8')) AS ?annotation8) . BIND(?this AS ?pfs7) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch58 faldo:location ?templateMotifSequenceMatchRegionP4901759 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP4901761 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP49017MF_0181354 . ?templateMotifSequenceMatchRegionP4901759 faldo:begin ?templateMotifSequenceMatchBeginP4901760 . ?templateMotifSequenceMatchBeginP4901760 faldo:position ?templateMotifSequenceMatchBeginPositionP4901755 ; faldo:reference isoform:P49017-1 . ?templateMotifSequenceProfileAlignmentOperationP4901761 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . ?targetMotifMatch62 faldo:location ?targetMotifMatchRegionMatch63 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181365 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP49017MF_0181356 . ?targetMotifMatchRegionMatch63 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181364 . ?targetMotifMatchRegionMatchBeginMF_0181364 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181357 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181365 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP49017MF_0181354, 1, (STRLEN(?templateMotifCigarP49017MF_0181354) - STRLEN(REPLACE(?templateMotifCigarP49017MF_0181354, CONCAT('^(?:-*[^-]){', STR(((122 - ?templateMotifSequenceMatchBeginPositionP4901755) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP49017MF_0181356, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181356) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181356, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP49017MF_0181356, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181356) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181356, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) . BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0181357) - 1) AS ?thisPositionOn19) . BIND(?thisPositionOn19 AS ?thisPositionOn20) . BIND(?this AS ?pfs1t68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) . FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_01813a15')) AS ?annotation15) . BIND(?this AS ?pfs14) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch73 faldo:location ?templateMotifSequenceMatchRegionP4901774 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP4901776 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP49017MF_0181369 . ?templateMotifSequenceMatchRegionP4901774 faldo:begin ?templateMotifSequenceMatchBeginP4901775 . ?templateMotifSequenceMatchBeginP4901775 faldo:position ?templateMotifSequenceMatchBeginPositionP4901770 ; faldo:reference isoform:P49017-1 . ?templateMotifSequenceProfileAlignmentOperationP4901776 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . ?targetMotifMatch77 faldo:location ?targetMotifMatchRegionMatch78 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181380 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP49017MF_0181371 . ?targetMotifMatchRegionMatch78 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181379 . ?targetMotifMatchRegionMatchBeginMF_0181379 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181372 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181380 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP49017MF_0181369, 1, (STRLEN(?templateMotifCigarP49017MF_0181369) - STRLEN(REPLACE(?templateMotifCigarP49017MF_0181369, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionP4901770) + 1)), '}'), '')))), '[a-z]', '')) AS ?step181) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP49017MF_0181371, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181371) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181371, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP49017MF_0181371, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181371) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181371, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), '')))), '[^-]', ''))) AS ?step282) . BIND(((?step282 + ?targetMotifMatchRegionMatchBeginPositionMF_0181372) - 1) AS ?thisPositionOn26) . BIND(?thisPositionOn26 AS ?thisPositionOn27) . BIND(?this AS ?pfs1t83) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01813a22')) AS ?annotation22) . BIND(?this AS ?pfs21) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch88 faldo:location ?templateMotifSequenceMatchRegionP4901789 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP4901791 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP49017MF_0181384 . ?templateMotifSequenceMatchRegionP4901789 faldo:begin ?templateMotifSequenceMatchBeginP4901790 . ?templateMotifSequenceMatchBeginP4901790 faldo:position ?templateMotifSequenceMatchBeginPositionP4901785 ; faldo:reference isoform:P49017-1 . ?templateMotifSequenceProfileAlignmentOperationP4901791 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . ?targetMotifMatch92 faldo:location ?targetMotifMatchRegionMatch93 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181395 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP49017MF_0181386 . ?targetMotifMatchRegionMatch93 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181394 . ?targetMotifMatchRegionMatchBeginMF_0181394 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181387 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181395 edam:has_input signature:MF_01813 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP49017MF_0181384, 1, (STRLEN(?templateMotifCigarP49017MF_0181384) - STRLEN(REPLACE(?templateMotifCigarP49017MF_0181384, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP4901785) + 1)), '}'), '')))), '[a-z]', '')) AS ?step196) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP49017MF_0181386, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181386) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181386, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP49017MF_0181386, 1, (STRLEN(?targetMotifMatchCigarP49017MF_0181386) - STRLEN(REPLACE(?targetMotifMatchCigarP49017MF_0181386, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), '')))), '[^-]', ''))) AS ?step297) . BIND(((?step297 + ?targetMotifMatchRegionMatchBeginPositionMF_0181387) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t98) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'S')) . BIND(URI(CONCAT(STR(?this), '#MF_01813a29')) AS ?annotation29) . BIND(?this AS ?pfs28) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1224 . BIND(?this AS ?case1) . BIND(URI(CONCAT(STR(?this), '#MF_01813a2')) AS ?name2) . BIND(URI(CONCAT(STR(?this), '#MF_01813a3')) AS ?name3) . BIND(URI(CONCAT(STR(?this), '#MF_01813a4')) AS ?name4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1224 . })) . BIND(?this AS ?case5) . BIND(URI(CONCAT(STR(?this), '#MF_01813a6')) AS ?name6) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01813 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01813#construct |