| http://purl.uniprot.org/unirules/MF_02027#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:714254 up:source unirule:MF_02027 .
_:714255 up:source unirule:MF_02027 .
_:714256 up:source unirule:MF_02027 .
_:714257 up:source unirule:MF_02027 .
_:714258 up:source unirule:MF_02027 .
_:714259 up:source unirule:MF_02027 .
_:714260 up:source unirule:MF_02027 .
_:714261 up:source unirule:MF_02027 .
_:714262 up:source unirule:MF_02027 .
_:714263 up:source unirule:MF_02027 .
_:714264 up:source unirule:MF_02027 .
_:714265 up:source unirule:MF_02027 .
_:714266 up:source unirule:MF_02027 .
_:714267 up:source unirule:MF_02027 .
_:714268 up:source unirule:MF_02027 .
_:714269 up:source unirule:MF_02027 .
_:714270 up:source unirule:MF_02027 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation4 ,
?annotation5 ,
?annotation7 ,
?annotation8 ,
?annotation9 ;
up:classifiedWith GO:0009246 ,
GO:0016747 ,
keyword:12 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.3.1.210' ;
up:fullName 'dTDP-fucosamine acetyltransferase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'TDP-fucosamine acetyltransferase' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase' ;
rdf:type up:Structured_Name .
?gene3 skos:prefLabel 'wecD' .
?annotation4 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino-4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA).' .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity ;
up:enzymeClass .
?annotation7 a up:Pathway_Annotation ;
rdfs:comment 'Bacterial outer membrane biogenesis; enterobacterial common antigen biosynthesis.' .
?annotation8 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the WecD family.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
up:ligand ?ligand14 ;
rdf:type up:Binding_Site_Annotation .
?pfsb12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?ligand14 rdfs:subClassOf chebi:57288 .
?pfs17 up:annotation ?annotation18 .
?annotation18 faldo:begin ?pfsb19 ;
faldo:end ?pfse20 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor' .
?pfsb19 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?pfse20 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfs23 up:annotation ?annotation24 .
?annotation24 faldo:begin ?pfsb25 ;
faldo:end ?pfse26 ;
up:ligand ?ligand27 ;
rdf:type up:Binding_Site_Annotation .
?pfsb25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?pfse26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?ligand27 rdfs:subClassOf chebi:57288 .
?pfs30 up:annotation ?annotation31 .
?annotation31 faldo:begin ?pfsb32 ;
faldo:end ?pfse33 ;
up:ligand ?ligand34 ;
rdf:type up:Binding_Site_Annotation .
?pfsb32 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?pfse33 faldo:position ?thisPositionOn36 ;
rdf:type faldo:ExactPosition .
?ligand34 rdfs:subClassOf chebi:57288 .
_:714271 a rdf:Statement ;
up:attribution _:714254 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:714272 a rdf:Statement ;
up:attribution _:714255 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:714273 a rdf:Statement ;
up:attribution _:714256 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:714274 a rdf:Statement ;
up:attribution _:714257 ;
rdf:subject ?gene3 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene3 .
_:714275 a rdf:Statement ;
up:attribution _:714258 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:714276 a rdf:Statement ;
up:attribution _:714259 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:714277 a rdf:Statement ;
up:attribution _:714260 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:714278 a rdf:Statement ;
up:attribution _:714261 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:714279 a rdf:Statement ;
up:attribution _:714262 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:714280 a rdf:Statement ;
up:attribution _:714263 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:12 .
_:714281 a rdf:Statement ;
up:attribution _:714264 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:714282 a rdf:Statement ;
up:attribution _:714265 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016747 .
_:714283 a rdf:Statement ;
up:attribution _:714266 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009246 .
_:714284 a rdf:Statement ;
up:source unirule:MF_02027 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:714285 a rdf:Statement ;
up:attribution _:714267 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:714286 a rdf:Statement ;
up:source unirule:MF_02027 ;
rdf:subject ?pfs17 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:714287 a rdf:Statement ;
up:attribution _:714268 ;
rdf:subject ?pfs17 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:714288 a rdf:Statement ;
up:source unirule:MF_02027 ;
rdf:subject ?pfs23 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:714289 a rdf:Statement ;
up:attribution _:714269 ;
rdf:subject ?pfs23 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:714290 a rdf:Statement ;
up:source unirule:MF_02027 ;
rdf:subject ?pfs30 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
_:714291 a rdf:Statement ;
up:attribution _:714270 ;
rdf:subject ?pfs30 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02027
#Rule MF_02027 Created by:? on:2015-04-22 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02027 .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(URI(CONCAT(STR(?this), '#MF_02027a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch41 faldo:location ?templateMotifSequenceMatchRegionQ8FBQ342 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8FBQ344 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8FBQ3MF_0202737 .
?templateMotifSequenceMatchRegionQ8FBQ342 faldo:begin ?templateMotifSequenceMatchBeginQ8FBQ343 .
?templateMotifSequenceMatchBeginQ8FBQ343 faldo:position ?templateMotifSequenceMatchBeginPositionQ8FBQ338 ;
faldo:reference isoform:Q8FBQ3-1 .
?templateMotifSequenceProfileAlignmentOperationQ8FBQ344 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
?targetMotifMatch45 faldo:location ?targetMotifMatchRegionMatch46 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0202748 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8FBQ3MF_0202739 .
?targetMotifMatchRegionMatch46 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0202747 .
?targetMotifMatchRegionMatchBeginMF_0202747 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0202740 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0202748 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8FBQ3MF_0202737, 1, (STRLEN(?templateMotifCigarQ8FBQ3MF_0202737) - STRLEN(REPLACE(?templateMotifCigarQ8FBQ3MF_0202737, CONCAT('^(?:-*[^-]){', STR(((168 - ?templateMotifSequenceMatchBeginPositionQ8FBQ338) + 1)), '}'), '')))), '[a-z]', '')) AS ?step149) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202739, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202739) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202739, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202739, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202739) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202739, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step149), '}'), '')))), '[^-]', ''))) AS ?step250) .
BIND(((?step250 + ?targetMotifMatchRegionMatchBeginPositionMF_0202740) - 1) AS ?thisPositionOn15) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8FBQ3MF_0202737, 1, (STRLEN(?templateMotifCigarQ8FBQ3MF_0202737) - STRLEN(REPLACE(?templateMotifCigarQ8FBQ3MF_0202737, CONCAT('^(?:-*[^-]){', STR(((174 - ?templateMotifSequenceMatchBeginPositionQ8FBQ338) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202739, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202739) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202739, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202739, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202739) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202739, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) .
BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0202740) - 1) AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t53) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) .
FILTER ((BOUND(?thisPositionOn15) && BOUND(?thisPositionOn16))) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch58 faldo:location ?templateMotifSequenceMatchRegionQ8FBQ359 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8FBQ361 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8FBQ3MF_0202754 .
?templateMotifSequenceMatchRegionQ8FBQ359 faldo:begin ?templateMotifSequenceMatchBeginQ8FBQ360 .
?templateMotifSequenceMatchBeginQ8FBQ360 faldo:position ?templateMotifSequenceMatchBeginPositionQ8FBQ355 ;
faldo:reference isoform:Q8FBQ3-1 .
?templateMotifSequenceProfileAlignmentOperationQ8FBQ361 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
?targetMotifMatch62 faldo:location ?targetMotifMatchRegionMatch63 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0202765 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8FBQ3MF_0202756 .
?targetMotifMatchRegionMatch63 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0202764 .
?targetMotifMatchRegionMatchBeginMF_0202764 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0202757 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0202765 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8FBQ3MF_0202754, 1, (STRLEN(?templateMotifCigarQ8FBQ3MF_0202754) - STRLEN(REPLACE(?templateMotifCigarQ8FBQ3MF_0202754, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionQ8FBQ355) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202756, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202756) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202756, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202756, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202756) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202756, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) .
BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0202757) - 1) AS ?thisPositionOn21) .
BIND(?thisPositionOn21 AS ?thisPositionOn22) .
BIND(?this AS ?pfs1t68) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a18')) AS ?annotation18) .
BIND(?this AS ?pfs17) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch73 faldo:location ?templateMotifSequenceMatchRegionQ8FBQ374 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8FBQ376 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8FBQ3MF_0202769 .
?templateMotifSequenceMatchRegionQ8FBQ374 faldo:begin ?templateMotifSequenceMatchBeginQ8FBQ375 .
?templateMotifSequenceMatchBeginQ8FBQ375 faldo:position ?templateMotifSequenceMatchBeginPositionQ8FBQ370 ;
faldo:reference isoform:Q8FBQ3-1 .
?templateMotifSequenceProfileAlignmentOperationQ8FBQ376 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
?targetMotifMatch77 faldo:location ?targetMotifMatchRegionMatch78 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0202780 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8FBQ3MF_0202771 .
?targetMotifMatchRegionMatch78 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0202779 .
?targetMotifMatchRegionMatchBeginMF_0202779 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0202772 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0202780 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8FBQ3MF_0202769, 1, (STRLEN(?templateMotifCigarQ8FBQ3MF_0202769) - STRLEN(REPLACE(?templateMotifCigarQ8FBQ3MF_0202769, CONCAT('^(?:-*[^-]){', STR(((201 - ?templateMotifSequenceMatchBeginPositionQ8FBQ370) + 1)), '}'), '')))), '[a-z]', '')) AS ?step181) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202771, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202771) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202771, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202771, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202771) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202771, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), '')))), '[^-]', ''))) AS ?step282) .
BIND(((?step282 + ?targetMotifMatchRegionMatchBeginPositionMF_0202772) - 1) AS ?thisPositionOn28) .
BIND(?thisPositionOn28 AS ?thisPositionOn29) .
BIND(?this AS ?pfs1t83) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a24')) AS ?annotation24) .
BIND(?this AS ?pfs23) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch88 faldo:location ?templateMotifSequenceMatchRegionQ8FBQ389 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8FBQ391 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8FBQ3MF_0202784 .
?templateMotifSequenceMatchRegionQ8FBQ389 faldo:begin ?templateMotifSequenceMatchBeginQ8FBQ390 .
?templateMotifSequenceMatchBeginQ8FBQ390 faldo:position ?templateMotifSequenceMatchBeginPositionQ8FBQ385 ;
faldo:reference isoform:Q8FBQ3-1 .
?templateMotifSequenceProfileAlignmentOperationQ8FBQ391 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
?targetMotifMatch92 faldo:location ?targetMotifMatchRegionMatch93 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0202795 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8FBQ3MF_0202786 .
?targetMotifMatchRegionMatch93 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0202794 .
?targetMotifMatchRegionMatchBeginMF_0202794 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0202787 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0202795 edam:has_input signature:MF_02027 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8FBQ3MF_0202784, 1, (STRLEN(?templateMotifCigarQ8FBQ3MF_0202784) - STRLEN(REPLACE(?templateMotifCigarQ8FBQ3MF_0202784, CONCAT('^(?:-*[^-]){', STR(((207 - ?templateMotifSequenceMatchBeginPositionQ8FBQ385) + 1)), '}'), '')))), '[a-z]', '')) AS ?step196) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202786, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202786) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202786, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8FBQ3MF_0202786, 1, (STRLEN(?targetMotifMatchCigarQ8FBQ3MF_0202786) - STRLEN(REPLACE(?targetMotifMatchCigarQ8FBQ3MF_0202786, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), '')))), '[^-]', ''))) AS ?step297) .
BIND(((?step297 + ?targetMotifMatchRegionMatchBeginPositionMF_0202787) - 1) AS ?thisPositionOn35) .
BIND(?thisPositionOn35 AS ?thisPositionOn36) .
BIND(?this AS ?pfs1t98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb32) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse33) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn35, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_02027a31')) AS ?annotation31) .
BIND(?this AS ?pfs30) .
}
}
"xsd:string |
