| http://purl.uniprot.org/unirules/MF_02069#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:732396 up:source unirule:MF_02069 .
_:732397 up:source unirule:MF_02069 .
_:732398 up:source unirule:MF_02069 .
_:732399 up:source unirule:MF_02069 .
_:732400 up:source unirule:MF_02069 .
_:732401 up:source unirule:MF_02069 .
_:732402 up:source unirule:MF_02069 .
_:732403 up:source unirule:MF_02069 .
_:732404 up:source unirule:MF_02069 .
_:732405 up:source unirule:MF_02069 .
_:732406 up:source unirule:MF_02069 .
_:732407 up:source unirule:MF_02069 .
_:732408 up:source unirule:MF_02069 .
_:732409 up:source unirule:MF_02069 .
_:732410 up:source unirule:MF_02069 .
_:732411 up:source unirule:MF_02069 .
_:732412 up:source unirule:MF_02069 .
_:732413 up:source unirule:MF_02069 .
_:732414 up:source unirule:MF_02069 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation6 ;
up:classifiedWith GO:0008270 ,
GO:0050256 ,
keyword:479 ,
keyword:521 ,
keyword:560 ,
keyword:862 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.1.1.405' ;
up:fullName 'Ribulose-5-phosphate reductase' ;
up:shortName 'Ribulose-5-P reductase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Ribitol-5-phosphate dehydrogenase' ;
rdf:type up:Structured_Name .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the NADPH dependent reduction of D-ribulose 5-phosphate to D-ribitol 5-phosphate.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:cofactor chebi:29105 ;
rdf:type up:Cofactor_Annotation .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the zinc-containing alcohol dehydrogenase family.' .
?case7 up:classifiedWith GO:1902012 ,
keyword:777 ,
keyword:961 .
?pfs8 up:annotation ?annotation9 ,
?annotation15 ,
?annotation21 ,
?annotation27 .
?annotation9 faldo:begin ?pfsb10 ;
faldo:end ?pfse11 ;
up:ligand ?ligand12 ;
rdf:type up:Binding_Site_Annotation .
?pfsb10 faldo:position ?thisPositionOn13 ;
rdf:type faldo:ExactPosition .
?pfse11 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?ligand12 rdfs:subClassOf chebi:29105 .
?annotation15 faldo:begin ?pfsb16 ;
faldo:end ?pfse17 ;
up:ligand ?ligand18 ;
rdf:type up:Binding_Site_Annotation .
?pfsb16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?ligand18 rdfs:subClassOf chebi:29105 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf chebi:29105 .
?annotation27 faldo:begin ?pfsb28 ;
faldo:end ?pfse29 ;
up:ligand ?ligand30 ;
rdf:type up:Binding_Site_Annotation .
?pfsb28 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfse29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?ligand30 rdfs:subClassOf chebi:29105 .
_:732415 a rdf:Statement ;
up:attribution _:732396 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:732416 a rdf:Statement ;
up:attribution _:732397 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:732417 a rdf:Statement ;
up:attribution _:732398 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:732418 a rdf:Statement ;
up:attribution _:732399 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:732419 a rdf:Statement ;
up:attribution _:732400 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:732420 a rdf:Statement ;
up:attribution _:732401 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:732421 a rdf:Statement ;
up:attribution _:732402 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:732422 a rdf:Statement ;
up:attribution _:732403 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:521 .
_:732423 a rdf:Statement ;
up:attribution _:732404 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:732424 a rdf:Statement ;
up:attribution _:732405 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:862 .
_:732425 a rdf:Statement ;
up:attribution _:732406 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0050256 .
_:732426 a rdf:Statement ;
up:attribution _:732407 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008270 .
_:732427 a rdf:Statement ;
up:attribution _:732408 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:961 .
_:732428 a rdf:Statement ;
up:attribution _:732409 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:777 .
_:732429 a rdf:Statement ;
up:attribution _:732410 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:1902012 .
_:732430 a rdf:Statement ;
up:source unirule:MF_02069 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:732431 a rdf:Statement ;
up:attribution _:732411 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:732432 a rdf:Statement ;
up:source unirule:MF_02069 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:732433 a rdf:Statement ;
up:attribution _:732412 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:732434 a rdf:Statement ;
up:source unirule:MF_02069 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:732435 a rdf:Statement ;
up:attribution _:732413 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:732436 a rdf:Statement ;
up:source unirule:MF_02069 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:732437 a rdf:Statement ;
up:attribution _:732414 ;
rdf:subject ?pfs8 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02069
#Rule MF_02069 Created by:? on:2016-07-14 Modified by:Catherine Rivoire on:2025-06-12
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02069 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_02069a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02069a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_02069a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_02069a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_02069a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_02069a6')) AS ?annotation6) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionQ8DPI338 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8DPI340 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8DPI3MF_0206933 .
?templateMotifSequenceMatchRegionQ8DPI338 faldo:begin ?templateMotifSequenceMatchBeginQ8DPI339 .
?templateMotifSequenceMatchBeginQ8DPI339 faldo:position ?templateMotifSequenceMatchBeginPositionQ8DPI334 ;
faldo:reference isoform:Q8DPI3-1 .
?templateMotifSequenceProfileAlignmentOperationQ8DPI340 edam:has_input signature:MF_02069 ;
rdf:type edam:operation_0300 .
?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0206944 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8DPI3MF_0206935 .
?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0206943 .
?targetMotifMatchRegionMatchBeginMF_0206943 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0206936 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0206944 edam:has_input signature:MF_02069 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8DPI3MF_0206933, 1, (STRLEN(?templateMotifCigarQ8DPI3MF_0206933) - STRLEN(REPLACE(?templateMotifCigarQ8DPI3MF_0206933, CONCAT('^(?:-*[^-]){', STR(((45 - ?templateMotifSequenceMatchBeginPositionQ8DPI334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) .
BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0206936) - 1) AS ?thisPositionOn13) .
BIND(?thisPositionOn13 AS ?thisPositionOn14) .
BIND(?this AS ?pfs1t47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8DPI3MF_0206933, 1, (STRLEN(?templateMotifCigarQ8DPI3MF_0206933) - STRLEN(REPLACE(?templateMotifCigarQ8DPI3MF_0206933, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionQ8DPI334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) .
BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0206936) - 1) AS ?thisPositionOn19) .
BIND(?thisPositionOn19 AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t50) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8DPI3MF_0206933, 1, (STRLEN(?templateMotifCigarQ8DPI3MF_0206933) - STRLEN(REPLACE(?templateMotifCigarQ8DPI3MF_0206933, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionQ8DPI334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) .
BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0206936) - 1) AS ?thisPositionOn25) .
BIND(?thisPositionOn25 AS ?thisPositionOn26) .
BIND(?this AS ?pfs1t53) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'E')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8DPI3MF_0206933, 1, (STRLEN(?templateMotifCigarQ8DPI3MF_0206933) - STRLEN(REPLACE(?templateMotifCigarQ8DPI3MF_0206933, CONCAT('^(?:-*[^-]){', STR(((151 - ?templateMotifSequenceMatchBeginPositionQ8DPI334) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8DPI3MF_0206935, 1, (STRLEN(?targetMotifMatchCigarQ8DPI3MF_0206935) - STRLEN(REPLACE(?targetMotifMatchCigarQ8DPI3MF_0206935, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) .
BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0206936) - 1) AS ?thisPositionOn31) .
BIND(?thisPositionOn31 AS ?thisPositionOn32) .
BIND(?this AS ?pfs1t56) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'E')) .
BIND(?this AS ?pfs8) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:91061 .
BIND(?this AS ?case7) .
}
}
"xsd:string |
