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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-73 |
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-104 |
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-92 |
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-97 |
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-99 |
| http://purl.uniprot.org/unirules/MF_03034#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03034#construct-template-90 |
| http://purl.uniprot.org/unirules/MF_03034#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03034#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03034#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03034#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03034#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03034#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:796296 up:source unirule:MF_03034 . _:796297 up:source unirule:MF_03034 . _:796298 up:source unirule:MF_03034 . _:796299 up:source unirule:MF_03034 . _:796300 up:source unirule:MF_03034 . _:796301 up:source unirule:MF_03034 . _:796302 up:source unirule:MF_03034 . _:796303 up:source unirule:MF_03034 . _:796304 up:source unirule:MF_03034 . _:796305 up:source unirule:MF_03034 . _:796306 up:source unirule:MF_03034 . _:796307 up:source unirule:MF_03034 . _:796308 up:source unirule:MF_03034 . _:796309 up:source unirule:MF_03034 . _:796310 up:source unirule:MF_03034 . _:796311 up:source unirule:MF_03034 . _:796312 up:source unirule:MF_03034 . _:796313 up:source unirule:MF_03034 . _:796314 up:source unirule:MF_03034 . _:796315 up:source unirule:MF_03034 . _:796316 up:source unirule:MF_03034 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0016442 , GO:0030422 , GO:0031054 , GO:0035197 , GO:0035198 , GO:0042803 , GO:0070922 , GO:0098795 , keyword:694 , keyword:810 , keyword:943 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:fullName 'RISC-loading complex subunit TARBP2' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'TARBP2' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from double-stranded RNA (dsRNA) by DICER1.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the TARBP2 family.' . ?case4 up:classifiedWith keyword:539 . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; rdf:type up:Region_Annotation ; rdfs:comment 'Sufficient for interaction with PRKRA' . ?pfsb8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Region_Annotation ; rdfs:comment 'Sufficient for interaction with PRKRA' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; rdf:type up:Region_Annotation ; rdfs:comment 'Sufficient for interaction with DICER1' . ?pfsb20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; rdf:type up:Region_Annotation ; rdfs:comment 'Sufficient for interaction with PRKRA' . ?pfsb26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . _:796317 a rdf:Statement ; up:attribution _:796296 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:796318 a rdf:Statement ; up:attribution _:796297 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:796319 a rdf:Statement ; up:attribution _:796298 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:796320 a rdf:Statement ; up:attribution _:796299 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:796321 a rdf:Statement ; up:attribution _:796300 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:796322 a rdf:Statement ; up:attribution _:796301 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:796323 a rdf:Statement ; up:attribution _:796302 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:943 . _:796324 a rdf:Statement ; up:attribution _:796303 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:810 . _:796325 a rdf:Statement ; up:attribution _:796304 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0035197 . _:796326 a rdf:Statement ; up:attribution _:796305 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0035198 . _:796327 a rdf:Statement ; up:attribution _:796306 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042803 . _:796328 a rdf:Statement ; up:attribution _:796307 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0030422 . _:796329 a rdf:Statement ; up:attribution _:796308 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0098795 . _:796330 a rdf:Statement ; up:attribution _:796309 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0031054 . _:796331 a rdf:Statement ; up:attribution _:796310 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0070922 . _:796332 a rdf:Statement ; up:attribution _:796311 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016442 . _:796333 a rdf:Statement ; up:attribution _:796312 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:539 . _:796334 a rdf:Statement ; up:source unirule:MF_03034 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:796335 a rdf:Statement ; up:attribution _:796313 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:796336 a rdf:Statement ; up:source unirule:MF_03034 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:796337 a rdf:Statement ; up:attribution _:796314 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:796338 a rdf:Statement ; up:source unirule:MF_03034 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:796339 a rdf:Statement ; up:attribution _:796315 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:796340 a rdf:Statement ; up:source unirule:MF_03034 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:796341 a rdf:Statement ; up:attribution _:796316 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03034 #Rule MF_03034 Created by:? on:2009-04-15 Modified by:Catherine Rivoire on:2022-05-03 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03034 . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(URI(CONCAT(STR(?this), '#MF_03034a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_03034a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_03034a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch34 faldo:location ?templateMotifSequenceMatchRegionQ1563335 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ1563337 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ15633MF_0303430 . ?templateMotifSequenceMatchRegionQ1563335 faldo:begin ?templateMotifSequenceMatchBeginQ1563336 . ?templateMotifSequenceMatchBeginQ1563336 faldo:position ?templateMotifSequenceMatchBeginPositionQ1563331 ; faldo:reference isoform:Q15633-1 . ?templateMotifSequenceProfileAlignmentOperationQ1563337 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?targetMotifMatch38 faldo:location ?targetMotifMatchRegionMatch39 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303441 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ15633MF_0303432 . ?targetMotifMatchRegionMatch39 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303440 . ?targetMotifMatchRegionMatchBeginMF_0303440 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303433 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0303441 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303430, 1, (STRLEN(?templateMotifCigarQ15633MF_0303430) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303430, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionQ1563331) + 1)), '}'), '')))), '[a-z]', '')) AS ?step142) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303432, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303432) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303432, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303432, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303432) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303432, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step142), '}'), '')))), '[^-]', ''))) AS ?step243) . BIND(((?step243 + ?targetMotifMatchRegionMatchBeginPositionMF_0303433) - 1) AS ?thisPositionOn10) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303430, 1, (STRLEN(?templateMotifCigarQ15633MF_0303430) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303430, CONCAT('^(?:-*[^-]){', STR(((105 - ?templateMotifSequenceMatchBeginPositionQ1563331) + 1)), '}'), '')))), '[a-z]', '')) AS ?step144) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303432, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303432) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303432, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step144), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303432, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303432) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303432, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step144), '}'), '')))), '[^-]', ''))) AS ?step245) . BIND(((?step245 + ?targetMotifMatchRegionMatchBeginPositionMF_0303433) - 1) AS ?thisPositionOn11) . BIND(?this AS ?pfs1t46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) . FILTER ((BOUND(?thisPositionOn10) && BOUND(?thisPositionOn11))) . BIND(URI(CONCAT(STR(?this), '#MF_03034a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch51 faldo:location ?templateMotifSequenceMatchRegionQ1563352 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ1563354 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ15633MF_0303447 . ?templateMotifSequenceMatchRegionQ1563352 faldo:begin ?templateMotifSequenceMatchBeginQ1563353 . ?templateMotifSequenceMatchBeginQ1563353 faldo:position ?templateMotifSequenceMatchBeginPositionQ1563348 ; faldo:reference isoform:Q15633-1 . ?templateMotifSequenceProfileAlignmentOperationQ1563354 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?targetMotifMatch55 faldo:location ?targetMotifMatchRegionMatch56 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303458 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ15633MF_0303449 . ?targetMotifMatchRegionMatch56 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303457 . ?targetMotifMatchRegionMatchBeginMF_0303457 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303450 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0303458 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303447, 1, (STRLEN(?templateMotifCigarQ15633MF_0303447) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303447, CONCAT('^(?:-*[^-]){', STR(((152 - ?templateMotifSequenceMatchBeginPositionQ1563348) + 1)), '}'), '')))), '[a-z]', '')) AS ?step159) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303449, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303449) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303449, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303449) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step159), '}'), '')))), '[^-]', ''))) AS ?step260) . BIND(((?step260 + ?targetMotifMatchRegionMatchBeginPositionMF_0303450) - 1) AS ?thisPositionOn16) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303447, 1, (STRLEN(?templateMotifCigarQ15633MF_0303447) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303447, CONCAT('^(?:-*[^-]){', STR(((234 - ?templateMotifSequenceMatchBeginPositionQ1563348) + 1)), '}'), '')))), '[a-z]', '')) AS ?step161) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303449, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303449) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step161), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303449, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303449) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step161), '}'), '')))), '[^-]', ''))) AS ?step262) . BIND(((?step262 + ?targetMotifMatchRegionMatchBeginPositionMF_0303450) - 1) AS ?thisPositionOn17) . BIND(?this AS ?pfs1t63) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) . BIND(URI(CONCAT(STR(?this), '#MF_03034a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch68 faldo:location ?templateMotifSequenceMatchRegionQ1563369 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ1563371 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ15633MF_0303464 . ?templateMotifSequenceMatchRegionQ1563369 faldo:begin ?templateMotifSequenceMatchBeginQ1563370 . ?templateMotifSequenceMatchBeginQ1563370 faldo:position ?templateMotifSequenceMatchBeginPositionQ1563365 ; faldo:reference isoform:Q15633-1 . ?templateMotifSequenceProfileAlignmentOperationQ1563371 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?targetMotifMatch72 faldo:location ?targetMotifMatchRegionMatch73 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303475 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ15633MF_0303466 . ?targetMotifMatchRegionMatch73 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303474 . ?targetMotifMatchRegionMatchBeginMF_0303474 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303467 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0303475 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303464, 1, (STRLEN(?templateMotifCigarQ15633MF_0303464) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303464, CONCAT('^(?:-*[^-]){', STR(((228 - ?templateMotifSequenceMatchBeginPositionQ1563365) + 1)), '}'), '')))), '[a-z]', '')) AS ?step176) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303466, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303466) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303466, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303466, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303466) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303466, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step176), '}'), '')))), '[^-]', ''))) AS ?step277) . BIND(((?step277 + ?targetMotifMatchRegionMatchBeginPositionMF_0303467) - 1) AS ?thisPositionOn22) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303464, 1, (STRLEN(?templateMotifCigarQ15633MF_0303464) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303464, CONCAT('^(?:-*[^-]){', STR(((366 - ?templateMotifSequenceMatchBeginPositionQ1563365) + 1)), '}'), '')))), '[a-z]', '')) AS ?step178) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303466, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303466) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303466, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303466, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303466) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303466, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step178), '}'), '')))), '[^-]', ''))) AS ?step279) . BIND(((?step279 + ?targetMotifMatchRegionMatchBeginPositionMF_0303467) - 1) AS ?thisPositionOn23) . BIND(?this AS ?pfs1t80) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) . FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) . BIND(URI(CONCAT(STR(?this), '#MF_03034a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch85 faldo:location ?templateMotifSequenceMatchRegionQ1563386 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ1563388 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ15633MF_0303481 . ?templateMotifSequenceMatchRegionQ1563386 faldo:begin ?templateMotifSequenceMatchBeginQ1563387 . ?templateMotifSequenceMatchBeginQ1563387 faldo:position ?templateMotifSequenceMatchBeginPositionQ1563382 ; faldo:reference isoform:Q15633-1 . ?templateMotifSequenceProfileAlignmentOperationQ1563388 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?targetMotifMatch89 faldo:location ?targetMotifMatchRegionMatch90 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303492 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ15633MF_0303483 . ?targetMotifMatchRegionMatch90 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303491 . ?targetMotifMatchRegionMatchBeginMF_0303491 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303484 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0303492 edam:has_input signature:MF_03034 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303481, 1, (STRLEN(?templateMotifCigarQ15633MF_0303481) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303481, CONCAT('^(?:-*[^-]){', STR(((287 - ?templateMotifSequenceMatchBeginPositionQ1563382) + 1)), '}'), '')))), '[a-z]', '')) AS ?step193) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303483, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303483) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step193), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303483, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303483) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step193), '}'), '')))), '[^-]', ''))) AS ?step294) . BIND(((?step294 + ?targetMotifMatchRegionMatchBeginPositionMF_0303484) - 1) AS ?thisPositionOn28) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ15633MF_0303481, 1, (STRLEN(?templateMotifCigarQ15633MF_0303481) - STRLEN(REPLACE(?templateMotifCigarQ15633MF_0303481, CONCAT('^(?:-*[^-]){', STR(((366 - ?templateMotifSequenceMatchBeginPositionQ1563382) + 1)), '}'), '')))), '[a-z]', '')) AS ?step195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ15633MF_0303483, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303483) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ15633MF_0303483, 1, (STRLEN(?targetMotifMatchCigarQ15633MF_0303483) - STRLEN(REPLACE(?targetMotifMatchCigarQ15633MF_0303483, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), '')))), '[^-]', ''))) AS ?step296) . BIND(((?step296 + ?targetMotifMatchRegionMatchBeginPositionMF_0303484) - 1) AS ?thisPositionOn29) . BIND(?this AS ?pfs1t97) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) . FILTER ((BOUND(?thisPositionOn28) && BOUND(?thisPositionOn29))) . BIND(URI(CONCAT(STR(?this), '#MF_03034a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?case5) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_03034 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03034#construct |