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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-97 |
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-73 |
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-98 |
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-94 |
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-70 |
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-95 |
| http://purl.uniprot.org/unirules/MF_03043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03043#construct-template-71 |
| http://purl.uniprot.org/unirules/MF_03043#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03043#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03043#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03043#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03043#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03043#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:799664 up:source unirule:MF_03043 . _:799665 up:source unirule:MF_03043 . _:799666 up:source unirule:MF_03043 . _:799667 up:source unirule:MF_03043 . _:799668 up:source unirule:MF_03043 . _:799669 up:source unirule:MF_03043 . _:799670 up:source unirule:MF_03043 . _:799671 up:source unirule:MF_03043 . _:799672 up:source unirule:MF_03043 . _:799673 up:source unirule:MF_03043 . _:799674 up:source unirule:MF_03043 . _:799675 up:source unirule:MF_03043 . _:799676 up:source unirule:MF_03043 . _:799677 up:source unirule:MF_03043 . _:799678 up:source unirule:MF_03043 . _:799679 up:source unirule:MF_03043 . _:799680 up:source unirule:MF_03043 . _:799681 up:source unirule:MF_03043 . _:799682 up:source unirule:MF_03043 . ?this up:alternativeName ?name1 ; up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0002099 , GO:0005737 , GO:0008479 , keyword:819 , keyword:963 ; up:recommendedName ?name0 . ?name0 up:fullName 'Queuine tRNA-ribosyltransferase accessory subunit 2' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Queuine tRNA-ribosyltransferase domain-containing protein 1' ; rdf:type up:Structured_Name . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Non-catalytic subunit of the queuine tRNA-ribosyltransferase (TGT) that catalyzes the base-exchange of a guanine (G) residue with queuine (Q) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the queuine tRNA-ribosyltransferase family. QTRT2 subfamily.' . ?case4 up:classifiedWith keyword:479 , keyword:862 . ?case5 up:classifiedWith GO:0005741 , keyword:1000 , keyword:472 , keyword:496 . ?pfs8 up:annotation ?annotation9 , ?annotation15 , ?annotation21 , ?annotation27 . ?annotation9 faldo:begin ?pfsb10 ; faldo:end ?pfse11 ; up:ligand ?ligand12 ; rdf:type up:Binding_Site_Annotation . ?pfsb10 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfse11 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?ligand12 rdfs:subClassOf chebi:29105 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; up:ligand ?ligand18 ; rdf:type up:Binding_Site_Annotation . ?pfsb16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?ligand18 rdfs:subClassOf chebi:29105 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; up:ligand ?ligand24 ; rdf:type up:Binding_Site_Annotation . ?pfsb22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?ligand24 rdfs:subClassOf chebi:29105 . ?annotation27 faldo:begin ?pfsb28 ; faldo:end ?pfse29 ; up:ligand ?ligand30 ; rdf:type up:Binding_Site_Annotation . ?pfsb28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?ligand30 rdfs:subClassOf chebi:29105 . _:799683 a rdf:Statement ; up:attribution _:799664 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:799684 a rdf:Statement ; up:attribution _:799665 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:799685 a rdf:Statement ; up:attribution _:799666 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:799686 a rdf:Statement ; up:attribution _:799667 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:799687 a rdf:Statement ; up:attribution _:799668 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:799688 a rdf:Statement ; up:attribution _:799669 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:799689 a rdf:Statement ; up:attribution _:799670 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:799690 a rdf:Statement ; up:attribution _:799671 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008479 . _:799691 a rdf:Statement ; up:attribution _:799672 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0002099 . _:799692 a rdf:Statement ; up:attribution _:799673 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:799693 a rdf:Statement ; up:attribution _:799674 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:799694 a rdf:Statement ; up:attribution _:799675 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:496 . _:799695 a rdf:Statement ; up:attribution _:799676 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1000 . _:799696 a rdf:Statement ; up:attribution _:799677 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:472 . _:799697 a rdf:Statement ; up:attribution _:799678 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005741 . _:799698 a rdf:Statement ; up:source unirule:MF_03043 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:799699 a rdf:Statement ; up:attribution _:799679 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:799700 a rdf:Statement ; up:source unirule:MF_03043 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:799701 a rdf:Statement ; up:attribution _:799680 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:799702 a rdf:Statement ; up:source unirule:MF_03043 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:799703 a rdf:Statement ; up:attribution _:799681 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:799704 a rdf:Statement ; up:source unirule:MF_03043 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . _:799705 a rdf:Statement ; up:attribution _:799682 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation27 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03043 #Rule MF_03043 Created by:? on:2009-08-11 Modified by:Catherine Rivoire on:2025-06-13 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03043 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03043a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_03043a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_03043a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_03043a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch37 faldo:location ?templateMotifSequenceMatchRegionB8ZXI138 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationB8ZXI140 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarB8ZXI1MF_0304333 . ?templateMotifSequenceMatchRegionB8ZXI138 faldo:begin ?templateMotifSequenceMatchBeginB8ZXI139 . ?templateMotifSequenceMatchBeginB8ZXI139 faldo:position ?templateMotifSequenceMatchBeginPositionB8ZXI134 ; faldo:reference isoform:B8ZXI1-1 . ?templateMotifSequenceProfileAlignmentOperationB8ZXI140 edam:has_input signature:MF_03043 ; rdf:type edam:operation_0300 . ?targetMotifMatch41 faldo:location ?targetMotifMatchRegionMatch42 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0304344 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarB8ZXI1MF_0304335 . ?targetMotifMatchRegionMatch42 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0304343 . ?targetMotifMatchRegionMatchBeginMF_0304343 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0304336 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0304344 edam:has_input signature:MF_03043 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarB8ZXI1MF_0304333, 1, (STRLEN(?templateMotifCigarB8ZXI1MF_0304333) - STRLEN(REPLACE(?templateMotifCigarB8ZXI1MF_0304333, CONCAT('^(?:-*[^-]){', STR(((351 - ?templateMotifSequenceMatchBeginPositionB8ZXI134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step145) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step145), '}'), '')))), '[^-]', ''))) AS ?step246) . BIND(((?step246 + ?targetMotifMatchRegionMatchBeginPositionMF_0304336) - 1) AS ?thisPositionOn13) . BIND(?thisPositionOn13 AS ?thisPositionOn14) . BIND(?this AS ?pfs1t47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfsb10) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfse11) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn13, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarB8ZXI1MF_0304333, 1, (STRLEN(?templateMotifCigarB8ZXI1MF_0304333) - STRLEN(REPLACE(?templateMotifCigarB8ZXI1MF_0304333, CONCAT('^(?:-*[^-]){', STR(((353 - ?templateMotifSequenceMatchBeginPositionB8ZXI134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0304336) - 1) AS ?thisPositionOn19) . BIND(?thisPositionOn19 AS ?thisPositionOn20) . BIND(?this AS ?pfs1t50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse17) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarB8ZXI1MF_0304333, 1, (STRLEN(?templateMotifCigarB8ZXI1MF_0304333) - STRLEN(REPLACE(?templateMotifCigarB8ZXI1MF_0304333, CONCAT('^(?:-*[^-]){', STR(((356 - ?templateMotifSequenceMatchBeginPositionB8ZXI134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0304336) - 1) AS ?thisPositionOn25) . BIND(?thisPositionOn25 AS ?thisPositionOn26) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarB8ZXI1MF_0304333, 1, (STRLEN(?templateMotifCigarB8ZXI1MF_0304333) - STRLEN(REPLACE(?templateMotifCigarB8ZXI1MF_0304333, CONCAT('^(?:-*[^-]){', STR(((382 - ?templateMotifSequenceMatchBeginPositionB8ZXI134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarB8ZXI1MF_0304335, 1, (STRLEN(?targetMotifMatchCigarB8ZXI1MF_0304335) - STRLEN(REPLACE(?targetMotifMatchCigarB8ZXI1MF_0304335, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) . BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0304336) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs1t56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'H')) . BIND(?this AS ?pfs8) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag57) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag57, ?UNBOUND_VARIABLE) AS ?case4) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:6237 . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:7742 . })) . BIND(?this AS ?case7) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_03043 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03043#construct |