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http://purl.uniprot.org/unirules/MF_00383#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00383#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00383#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00383#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00383#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:151804 up:source unirule:MF_00383 . _:151805 up:source unirule:MF_00383 . _:151806 up:source unirule:MF_00383 . _:151807 up:source unirule:MF_00383 . _:151808 up:source unirule:MF_00383 . _:151809 up:source unirule:MF_00383 . _:151810 up:source unirule:MF_00383 . _:151811 up:source unirule:MF_00383 . _:151812 up:source unirule:MF_00383 . _:151813 up:source unirule:MF_00383 . _:151814 up:source unirule:MF_00383 . _:151815 up:source unirule:MF_00383 . _:151816 up:source unirule:MF_00383 . _:151817 up:source unirule:MF_00383 . _:151818 up:source unirule:MF_00383 . _:151819 up:source unirule:MF_00383 . _:151820 up:source unirule:MF_00383 . _:151821 up:source unirule:MF_00383 . _:151822 up:source unirule:MF_00383 . ?this up:annotation ?annotation2 , ?annotation3 ; up:classifiedWith GO:0003700 , GO:0006352 , GO:0006355 , keyword:677 , keyword:804 , keyword:805 ; up:recommendedName ?name0 . ?name0 up:fullName 'Transcription initiation factor IIB' ; up:shortName 'TFIIB' ; rdf:type up:Structured_Name . ?gene1 skos:prefLabel 'tfb' . ?annotation2 a up:Function_Annotation ; rdfs:comment 'Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the TFIIB family.' . ?case4 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 . ?pfs5 up:annotation ?annotation6 , ?annotation12 , ?annotation18 , ?annotation24 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:29105 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf chebi:29105 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; up:ligand ?ligand21 ; rdf:type up:Binding_Site_Annotation . ?pfsb19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?ligand21 rdfs:subClassOf chebi:29105 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; up:ligand ?ligand27 ; rdf:type up:Binding_Site_Annotation . ?pfsb25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?ligand27 rdfs:subClassOf chebi:29105 . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; rdf:type up:Repeat_Annotation ; rdfs:comment '1' . ?pfsb32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . ?pfs36 up:annotation ?annotation37 . ?annotation37 faldo:begin ?pfsb38 ; faldo:end ?pfse39 ; rdf:type up:Repeat_Annotation ; rdfs:comment '2' . ?pfsb38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse39 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . _:151823 a rdf:Statement ; up:attribution _:151804 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:151824 a rdf:Statement ; up:attribution _:151805 ; rdf:subject ?gene1 ; rdf:predicate up:encodedBy ; rdf:object ?gene1 . _:151825 a rdf:Statement ; up:attribution _:151806 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:151826 a rdf:Statement ; up:attribution _:151807 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:151827 a rdf:Statement ; up:attribution _:151808 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:151828 a rdf:Statement ; up:attribution _:151809 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:151829 a rdf:Statement ; up:attribution _:151810 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:677 . _:151830 a rdf:Statement ; up:attribution _:151811 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003700 . _:151831 a rdf:Statement ; up:attribution _:151812 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006355 . _:151832 a rdf:Statement ; up:attribution _:151813 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006352 . _:151833 a rdf:Statement ; up:attribution _:151814 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:151834 a rdf:Statement ; up:attribution _:151815 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:151835 a rdf:Statement ; up:attribution _:151816 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:151836 a rdf:Statement ; up:source unirule:MF_00383 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:151837 a rdf:Statement ; up:attribution _:151817 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:151838 a rdf:Statement ; up:source unirule:MF_00383 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:151839 a rdf:Statement ; up:attribution _:151818 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:151840 a rdf:Statement ; up:source unirule:MF_00383 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:151841 a rdf:Statement ; up:attribution _:151819 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:151842 a rdf:Statement ; up:source unirule:MF_00383 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:151843 a rdf:Statement ; up:attribution _:151820 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:151844 a rdf:Statement ; up:source unirule:MF_00383 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:151845 a rdf:Statement ; up:attribution _:151821 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:151846 a rdf:Statement ; up:source unirule:MF_00383 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . _:151847 a rdf:Statement ; up:attribution _:151822 ; rdf:subject ?pfs36 ; rdf:predicate up:annotation ; rdf:object ?annotation37 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00383 #Rule MF_00383 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00383 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_00383a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00383a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00383a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch46 faldo:location ?templateMotifSequenceMatchRegionP6199847 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6199849 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP61998MF_0038342 . ?templateMotifSequenceMatchRegionP6199847 faldo:begin ?templateMotifSequenceMatchBeginP6199848 . ?templateMotifSequenceMatchBeginP6199848 faldo:position ?templateMotifSequenceMatchBeginPositionP6199843 ; faldo:reference isoform:P61998-1 . ?templateMotifSequenceProfileAlignmentOperationP6199849 edam:has_input signature:MF_00383 ; rdf:type edam:operation_0300 . ?targetMotifMatch50 faldo:location ?targetMotifMatchRegionMatch51 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0038353 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP61998MF_0038344 . ?targetMotifMatchRegionMatch51 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0038352 . ?targetMotifMatchRegionMatchBeginMF_0038352 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0038345 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0038353 edam:has_input signature:MF_00383 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038342, 1, (STRLEN(?templateMotifCigarP61998MF_0038342) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038342, CONCAT('^(?:-*[^-]){', STR(((7 - ?templateMotifSequenceMatchBeginPositionP6199843) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) . BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0038345) - 1) AS ?thisPositionOn10) . BIND(?thisPositionOn10 AS ?thisPositionOn11) . BIND(?this AS ?pfs1t56) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn10, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038342, 1, (STRLEN(?templateMotifCigarP61998MF_0038342) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038342, CONCAT('^(?:-*[^-]){', STR(((10 - ?templateMotifSequenceMatchBeginPositionP6199843) + 1)), '}'), '')))), '[a-z]', '')) AS ?step157) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), '')))), '[^-]', ''))) AS ?step258) . BIND(((?step258 + ?targetMotifMatchRegionMatchBeginPositionMF_0038345) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t59) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038342, 1, (STRLEN(?templateMotifCigarP61998MF_0038342) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038342, CONCAT('^(?:-*[^-]){', STR(((26 - ?templateMotifSequenceMatchBeginPositionP6199843) + 1)), '}'), '')))), '[a-z]', '')) AS ?step160) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), '')))), '[^-]', ''))) AS ?step261) . BIND(((?step261 + ?targetMotifMatchRegionMatchBeginPositionMF_0038345) - 1) AS ?thisPositionOn22) . BIND(?thisPositionOn22 AS ?thisPositionOn23) . BIND(?this AS ?pfs1t62) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038342, 1, (STRLEN(?templateMotifCigarP61998MF_0038342) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038342, CONCAT('^(?:-*[^-]){', STR(((29 - ?templateMotifSequenceMatchBeginPositionP6199843) + 1)), '}'), '')))), '[a-z]', '')) AS ?step163) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step163), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038344, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038344) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step163), '}'), '')))), '[^-]', ''))) AS ?step264) . BIND(((?step264 + ?targetMotifMatchRegionMatchBeginPositionMF_0038345) - 1) AS ?thisPositionOn28) . BIND(?thisPositionOn28 AS ?thisPositionOn29) . BIND(?this AS ?pfs1t65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'C')) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch70 faldo:location ?templateMotifSequenceMatchRegionP6199871 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6199873 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP61998MF_0038366 . ?templateMotifSequenceMatchRegionP6199871 faldo:begin ?templateMotifSequenceMatchBeginP6199872 . ?templateMotifSequenceMatchBeginP6199872 faldo:position ?templateMotifSequenceMatchBeginPositionP6199867 ; faldo:reference isoform:P61998-1 . ?templateMotifSequenceProfileAlignmentOperationP6199873 edam:has_input signature:MF_00383 ; rdf:type edam:operation_0300 . ?targetMotifMatch74 faldo:location ?targetMotifMatchRegionMatch75 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0038377 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP61998MF_0038368 . ?targetMotifMatchRegionMatch75 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0038376 . ?targetMotifMatchRegionMatchBeginMF_0038376 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0038369 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0038377 edam:has_input signature:MF_00383 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038366, 1, (STRLEN(?templateMotifCigarP61998MF_0038366) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038366, CONCAT('^(?:-*[^-]){', STR(((114 - ?templateMotifSequenceMatchBeginPositionP6199867) + 1)), '}'), '')))), '[a-z]', '')) AS ?step178) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038368, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038368) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038368, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038368, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038368) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038368, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step178), '}'), '')))), '[^-]', ''))) AS ?step279) . BIND(((?step279 + ?targetMotifMatchRegionMatchBeginPositionMF_0038369) - 1) AS ?thisPositionOn34) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038366, 1, (STRLEN(?templateMotifCigarP61998MF_0038366) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038366, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP6199867) + 1)), '}'), '')))), '[a-z]', '')) AS ?step180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038368, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038368) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038368, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038368, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038368) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038368, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), '')))), '[^-]', ''))) AS ?step281) . BIND(((?step281 + ?targetMotifMatchRegionMatchBeginPositionMF_0038369) - 1) AS ?thisPositionOn35) . BIND(?this AS ?pfs2t82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) . FILTER ((BOUND(?thisPositionOn34) && BOUND(?thisPositionOn35))) . BIND(URI(CONCAT(STR(?this), '#MF_00383a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch87 faldo:location ?templateMotifSequenceMatchRegionP6199888 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6199890 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP61998MF_0038383 . ?templateMotifSequenceMatchRegionP6199888 faldo:begin ?templateMotifSequenceMatchBeginP6199889 . ?templateMotifSequenceMatchBeginP6199889 faldo:position ?templateMotifSequenceMatchBeginPositionP6199884 ; faldo:reference isoform:P61998-1 . ?templateMotifSequenceProfileAlignmentOperationP6199890 edam:has_input signature:MF_00383 ; rdf:type edam:operation_0300 . ?targetMotifMatch91 faldo:location ?targetMotifMatchRegionMatch92 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0038394 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP61998MF_0038385 . ?targetMotifMatchRegionMatch92 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0038393 . ?targetMotifMatchRegionMatchBeginMF_0038393 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0038386 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0038394 edam:has_input signature:MF_00383 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038383, 1, (STRLEN(?templateMotifCigarP61998MF_0038383) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038383, CONCAT('^(?:-*[^-]){', STR(((210 - ?templateMotifSequenceMatchBeginPositionP6199884) + 1)), '}'), '')))), '[a-z]', '')) AS ?step195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038385, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038385) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038385, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038385) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), '')))), '[^-]', ''))) AS ?step296) . BIND(((?step296 + ?targetMotifMatchRegionMatchBeginPositionMF_0038386) - 1) AS ?thisPositionOn40) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP61998MF_0038383, 1, (STRLEN(?templateMotifCigarP61998MF_0038383) - STRLEN(REPLACE(?templateMotifCigarP61998MF_0038383, CONCAT('^(?:-*[^-]){', STR(((291 - ?templateMotifSequenceMatchBeginPositionP6199884) + 1)), '}'), '')))), '[a-z]', '')) AS ?step197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP61998MF_0038385, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038385) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP61998MF_0038385, 1, (STRLEN(?targetMotifMatchCigarP61998MF_0038385) - STRLEN(REPLACE(?targetMotifMatchCigarP61998MF_0038385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), '')))), '[^-]', ''))) AS ?step298) . BIND(((?step298 + ?targetMotifMatchRegionMatchBeginPositionMF_0038386) - 1) AS ?thisPositionOn41) . BIND(?this AS ?pfs2t99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb38) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse39) . FILTER ((BOUND(?thisPositionOn40) && BOUND(?thisPositionOn41))) . BIND(URI(CONCAT(STR(?this), '#MF_00383a37')) AS ?annotation37) . BIND(?this AS ?pfs36) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag100) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag100, ?UNBOUND_VARIABLE) AS ?case4) . } "xsd:string
http://purl.uniprot.org/unirules/MF_00383http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00383#construct
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