| http://purl.uniprot.org/unirules/MF_00472#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:189575 up:source unirule:MF_00472 .
_:189576 up:source unirule:MF_00472 .
_:189577 up:source unirule:MF_00472 .
_:189578 up:source unirule:MF_00472 .
_:189579 up:source unirule:MF_00472 .
_:189580 up:source unirule:MF_00472 .
_:189581 up:source unirule:MF_00472 .
_:189582 up:source unirule:MF_00472 .
_:189583 up:source unirule:MF_00472 .
_:189584 up:source unirule:MF_00472 .
_:189585 up:source unirule:MF_00472 .
_:189586 up:source unirule:MF_00472 .
_:189587 up:source unirule:MF_00472 .
_:189588 up:source unirule:MF_00472 .
_:189589 up:source unirule:MF_00472 .
_:189590 up:source unirule:MF_00472 .
_:189591 up:source unirule:MF_00472 .
_:189592 up:source unirule:MF_00472 .
_:189593 up:source unirule:MF_00472 .
_:189594 up:source unirule:MF_00472 .
_:189595 up:source unirule:MF_00472 .
_:189596 up:source unirule:MF_00472 .
?this up:annotation ?annotation1 ,
?annotation2 ,
?annotation4 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0006744 ,
GO:0061542 ,
keyword:489 ,
keyword:808 ,
keyword:831 ,
keyword:949 .
?gene0 skos:prefLabel 'ubiG' .
?annotation1 a up:Function_Annotation ;
rdfs:comment 'O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway.' .
?annotation2 up:activity ?activity3 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity3 up:catalyticActivity ;
up:enzymeClass .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Cofactor biosynthesis; ubiquinone biosynthesis.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the methyltransferase superfamily. UbiG/COQ3 family.' .
?case8 up:alternativeName ?name10 ,
?name11 ;
up:recommendedName ?name9 .
?name9 up:fullName 'Ubiquinone biosynthesis O-methyltransferase' ;
rdf:type up:Structured_Name .
?name10 up:ecName '2.1.1.64' ;
up:fullName '3-demethylubiquinone-8 3-O-methyltransferase' ;
rdf:type up:Structured_Name .
?name11 up:ecName '2.1.1.222' ;
up:fullName '2-octaprenyl-6-hydroxyphenol methylase' ;
rdf:type up:Structured_Name .
?case12 up:alternativeName ?name14 ,
?name15 ;
up:recommendedName ?name13 .
?name13 up:fullName 'Ubiquinone biosynthesis O-methyltransferase' ;
rdf:type up:Structured_Name .
?name14 up:ecName '2.1.1.64' ;
up:fullName '3-demethylubiquinone 3-O-methyltransferase' ;
rdf:type up:Structured_Name .
?name15 up:ecName '2.1.1.222' ;
up:fullName '2-polyprenyl-6-hydroxyphenol methylase' ;
rdf:type up:Structured_Name .
?pfs16 up:annotation ?annotation17 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
up:ligand ?ligand20 ;
rdf:type up:Binding_Site_Annotation .
?pfsb18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?ligand20 rdfs:subClassOf chebi:59789 .
?pfs23 up:annotation ?annotation24 .
?annotation24 faldo:begin ?pfsb25 ;
faldo:end ?pfse26 ;
up:ligand ?ligand27 ;
rdf:type up:Binding_Site_Annotation .
?pfsb25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?pfse26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?ligand27 rdfs:subClassOf chebi:59789 .
?pfs30 up:annotation ?annotation31 .
?annotation31 faldo:begin ?pfsb32 ;
faldo:end ?pfse33 ;
up:ligand ?ligand34 ;
rdf:type up:Binding_Site_Annotation .
?pfsb32 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?pfse33 faldo:position ?thisPositionOn36 ;
rdf:type faldo:ExactPosition .
?ligand34 rdfs:subClassOf chebi:59789 .
?pfs37 up:annotation ?annotation38 .
?annotation38 faldo:begin ?pfsb39 ;
faldo:end ?pfse40 ;
up:ligand ?ligand41 ;
rdf:type up:Binding_Site_Annotation .
?pfsb39 faldo:position ?thisPositionOn42 ;
rdf:type faldo:ExactPosition .
?pfse40 faldo:position ?thisPositionOn43 ;
rdf:type faldo:ExactPosition .
?ligand41 rdfs:subClassOf chebi:59789 .
_:189597 a rdf:Statement ;
up:attribution _:189575 ;
rdf:subject ?gene0 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene0 .
_:189598 a rdf:Statement ;
up:attribution _:189576 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:189599 a rdf:Statement ;
up:attribution _:189577 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:189600 a rdf:Statement ;
up:attribution _:189578 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:189601 a rdf:Statement ;
up:attribution _:189579 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:189602 a rdf:Statement ;
up:attribution _:189580 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:189603 a rdf:Statement ;
up:attribution _:189581 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:831 .
_:189604 a rdf:Statement ;
up:attribution _:189582 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:189605 a rdf:Statement ;
up:attribution _:189583 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:489 .
_:189606 a rdf:Statement ;
up:attribution _:189584 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:949 .
_:189607 a rdf:Statement ;
up:attribution _:189585 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0061542 .
_:189608 a rdf:Statement ;
up:attribution _:189586 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006744 .
_:189609 a rdf:Statement ;
up:attribution _:189587 ;
rdf:subject ?case8 ;
rdf:predicate up:recommendedName ;
rdf:object ?name9 .
_:189610 a rdf:Statement ;
up:attribution _:189588 ;
rdf:subject ?case8 ;
rdf:predicate up:alternativeName ;
rdf:object ?name10 .
_:189611 a rdf:Statement ;
up:attribution _:189589 ;
rdf:subject ?case8 ;
rdf:predicate up:alternativeName ;
rdf:object ?name11 .
_:189612 a rdf:Statement ;
up:attribution _:189590 ;
rdf:subject ?case12 ;
rdf:predicate up:recommendedName ;
rdf:object ?name13 .
_:189613 a rdf:Statement ;
up:attribution _:189591 ;
rdf:subject ?case12 ;
rdf:predicate up:alternativeName ;
rdf:object ?name14 .
_:189614 a rdf:Statement ;
up:attribution _:189592 ;
rdf:subject ?case12 ;
rdf:predicate up:alternativeName ;
rdf:object ?name15 .
_:189615 a rdf:Statement ;
up:source unirule:MF_00472 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:189616 a rdf:Statement ;
up:attribution _:189593 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:189617 a rdf:Statement ;
up:source unirule:MF_00472 ;
rdf:subject ?pfs23 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:189618 a rdf:Statement ;
up:attribution _:189594 ;
rdf:subject ?pfs23 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:189619 a rdf:Statement ;
up:source unirule:MF_00472 ;
rdf:subject ?pfs30 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
_:189620 a rdf:Statement ;
up:attribution _:189595 ;
rdf:subject ?pfs30 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
_:189621 a rdf:Statement ;
up:source unirule:MF_00472 ;
rdf:subject ?pfs37 ;
rdf:predicate up:annotation ;
rdf:object ?annotation38 .
_:189622 a rdf:Statement ;
up:attribution _:189596 ;
rdf:subject ?pfs37 ;
rdf:predicate up:annotation ;
rdf:object ?annotation38 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00472
#Rule MF_00472 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-01-14
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00472 .
?thisOrganism rdfs:subClassOf+ taxon:1224 .
BIND(URI(CONCAT(STR(?this), '#MF_00472a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch48 faldo:location ?templateMotifSequenceMatchRegionP1799349 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1799351 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP17993MF_0047244 .
?templateMotifSequenceMatchRegionP1799349 faldo:begin ?templateMotifSequenceMatchBeginP1799350 .
?templateMotifSequenceMatchBeginP1799350 faldo:position ?templateMotifSequenceMatchBeginPositionP1799345 ;
faldo:reference isoform:P17993-1 .
?templateMotifSequenceProfileAlignmentOperationP1799351 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
?targetMotifMatch52 faldo:location ?targetMotifMatchRegionMatch53 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0047255 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP17993MF_0047246 .
?targetMotifMatchRegionMatch53 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0047254 .
?targetMotifMatchRegionMatchBeginMF_0047254 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0047247 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0047255 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP17993MF_0047244, 1, (STRLEN(?templateMotifCigarP17993MF_0047244) - STRLEN(REPLACE(?templateMotifCigarP17993MF_0047244, CONCAT('^(?:-*[^-]){', STR(((129 - ?templateMotifSequenceMatchBeginPositionP1799345) + 1)), '}'), '')))), '[a-z]', '')) AS ?step156) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP17993MF_0047246, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047246) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP17993MF_0047246, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047246) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047246, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), '')))), '[^-]', ''))) AS ?step257) .
BIND(((?step257 + ?targetMotifMatchRegionMatchBeginPositionMF_0047247) - 1) AS ?thisPositionOn21) .
BIND(?thisPositionOn21 AS ?thisPositionOn22) .
BIND(?this AS ?pfs1t58) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) .
FILTER (BOUND(?thisPositionOn21)) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a17')) AS ?annotation17) .
BIND(?this AS ?pfs16) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch63 faldo:location ?templateMotifSequenceMatchRegionP1799364 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1799366 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP17993MF_0047259 .
?templateMotifSequenceMatchRegionP1799364 faldo:begin ?templateMotifSequenceMatchBeginP1799365 .
?templateMotifSequenceMatchBeginP1799365 faldo:position ?templateMotifSequenceMatchBeginPositionP1799360 ;
faldo:reference isoform:P17993-1 .
?templateMotifSequenceProfileAlignmentOperationP1799366 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
?targetMotifMatch67 faldo:location ?targetMotifMatchRegionMatch68 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0047270 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP17993MF_0047261 .
?targetMotifMatchRegionMatch68 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0047269 .
?targetMotifMatchRegionMatchBeginMF_0047269 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0047262 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0047270 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP17993MF_0047259, 1, (STRLEN(?templateMotifCigarP17993MF_0047259) - STRLEN(REPLACE(?templateMotifCigarP17993MF_0047259, CONCAT('^(?:-*[^-]){', STR(((44 - ?templateMotifSequenceMatchBeginPositionP1799360) + 1)), '}'), '')))), '[a-z]', '')) AS ?step171) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP17993MF_0047261, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047261) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step171), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP17993MF_0047261, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047261) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step171), '}'), '')))), '[^-]', ''))) AS ?step272) .
BIND(((?step272 + ?targetMotifMatchRegionMatchBeginPositionMF_0047262) - 1) AS ?thisPositionOn28) .
BIND(?thisPositionOn28 AS ?thisPositionOn29) .
BIND(?this AS ?pfs1t73) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a24')) AS ?annotation24) .
BIND(?this AS ?pfs23) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch78 faldo:location ?templateMotifSequenceMatchRegionP1799379 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1799381 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP17993MF_0047274 .
?templateMotifSequenceMatchRegionP1799379 faldo:begin ?templateMotifSequenceMatchBeginP1799380 .
?templateMotifSequenceMatchBeginP1799380 faldo:position ?templateMotifSequenceMatchBeginPositionP1799375 ;
faldo:reference isoform:P17993-1 .
?templateMotifSequenceProfileAlignmentOperationP1799381 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
?targetMotifMatch82 faldo:location ?targetMotifMatchRegionMatch83 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0047285 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP17993MF_0047276 .
?targetMotifMatchRegionMatch83 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0047284 .
?targetMotifMatchRegionMatchBeginMF_0047284 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0047277 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0047285 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP17993MF_0047274, 1, (STRLEN(?templateMotifCigarP17993MF_0047274) - STRLEN(REPLACE(?templateMotifCigarP17993MF_0047274, CONCAT('^(?:-*[^-]){', STR(((64 - ?templateMotifSequenceMatchBeginPositionP1799375) + 1)), '}'), '')))), '[a-z]', '')) AS ?step186) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP17993MF_0047276, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047276) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP17993MF_0047276, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047276) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), '')))), '[^-]', ''))) AS ?step287) .
BIND(((?step287 + ?targetMotifMatchRegionMatchBeginPositionMF_0047277) - 1) AS ?thisPositionOn35) .
BIND(?thisPositionOn35 AS ?thisPositionOn36) .
BIND(?this AS ?pfs1t88) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb32) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse33) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn35, 1) = 'G')) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a31')) AS ?annotation31) .
BIND(?this AS ?pfs30) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch93 faldo:location ?templateMotifSequenceMatchRegionP1799394 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1799396 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP17993MF_0047289 .
?templateMotifSequenceMatchRegionP1799394 faldo:begin ?templateMotifSequenceMatchBeginP1799395 .
?templateMotifSequenceMatchBeginP1799395 faldo:position ?templateMotifSequenceMatchBeginPositionP1799390 ;
faldo:reference isoform:P17993-1 .
?templateMotifSequenceProfileAlignmentOperationP1799396 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
?targetMotifMatch97 faldo:location ?targetMotifMatchRegionMatch98 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00472100 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP17993MF_0047291 .
?targetMotifMatchRegionMatch98 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0047299 .
?targetMotifMatchRegionMatchBeginMF_0047299 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0047292 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00472100 edam:has_input signature:MF_00472 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP17993MF_0047289, 1, (STRLEN(?templateMotifCigarP17993MF_0047289) - STRLEN(REPLACE(?templateMotifCigarP17993MF_0047289, CONCAT('^(?:-*[^-]){', STR(((85 - ?templateMotifSequenceMatchBeginPositionP1799390) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP17993MF_0047291, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047291) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047291, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP17993MF_0047291, 1, (STRLEN(?targetMotifMatchCigarP17993MF_0047291) - STRLEN(REPLACE(?targetMotifMatchCigarP17993MF_0047291, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) .
BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0047292) - 1) AS ?thisPositionOn42) .
BIND(?thisPositionOn42 AS ?thisPositionOn43) .
BIND(?this AS ?pfs1t103) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb39) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse40) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a38')) AS ?annotation38) .
BIND(?this AS ?pfs37) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:561 .
BIND(?this AS ?case8) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a9')) AS ?name9) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a10')) AS ?name10) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a11')) AS ?name11) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:561 .
})) .
BIND(?this AS ?case12) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a13')) AS ?name13) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a14')) AS ?name14) .
BIND(URI(CONCAT(STR(?this), '#MF_00472a15')) AS ?name15) .
}
}
"xsd:string |
