| http://purl.uniprot.org/unirules/MF_00802#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:286612 up:source unirule:MF_00802 .
_:286613 up:source unirule:MF_00802 .
_:286614 up:source unirule:MF_00802 .
_:286615 up:ecName '2.7.7.89' ;
up:fullName 'Glutamine synthetase adenylyl-L-tyrosine phosphorylase' ;
rdf:type up:Structured_Name .
_:286616 up:fullName 'Adenylyl removase' ;
up:shortName 'AR' ,
'AT-N' ;
rdf:type up:Structured_Name .
_:286617 up:source unirule:MF_00802 .
_:286618 up:ecName '2.7.7.42' ;
up:fullName 'Glutamine synthetase adenylyl transferase' ;
rdf:type up:Structured_Name .
_:286619 up:fullName 'Adenylyl transferase' ;
up:shortName 'AT' ,
'AT-C' ;
rdf:type up:Structured_Name .
_:286620 up:source unirule:MF_00802 .
_:286621 up:source unirule:MF_00802 .
_:286622 up:source unirule:MF_00802 .
_:286623 up:source unirule:MF_00802 .
_:286624 up:source unirule:MF_00802 .
_:286625 up:source unirule:MF_00802 .
_:286626 up:source unirule:MF_00802 .
_:286627 up:source unirule:MF_00802 .
_:286628 up:source unirule:MF_00802 .
_:286629 up:source unirule:MF_00802 .
_:286630 up:source unirule:MF_00802 .
_:286631 up:source unirule:MF_00802 .
_:286632 up:source unirule:MF_00802 .
_:286633 up:source unirule:MF_00802 .
_:286634 up:source unirule:MF_00802 .
_:286635 up:source unirule:MF_00802 .
_:286636 up:source unirule:MF_00802 .
_:286637 up:source unirule:MF_00802 .
_:286638 up:source unirule:MF_00802 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation6 ,
?annotation7 ,
?annotation9 ,
?annotation11 ,
?annotation12 ;
up:classifiedWith GO:0000287 ,
GO:0000820 ,
GO:0005524 ,
GO:0008882 ,
keyword:460 ,
keyword:511 ,
keyword:547 ,
keyword:548 ,
keyword:67 ,
keyword:808 ;
up:domain ?namedpart3 ,
?namedpart4 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'ATP:glutamine synthetase adenylyltransferase' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'ATase' ;
rdf:type up:Structured_Name .
?namedpart3 up:alternativeName _:286616 ;
up:recommendedName _:286615 .
?namedpart4 up:alternativeName _:286619 ;
up:recommendedName _:286618 .
?gene5 skos:prefLabel 'glnE' .
?annotation6 a up:Function_Annotation ;
rdfs:comment 'Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell.' .
?annotation7 up:activity ?activity8 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity8 up:catalyticActivity ;
up:enzymeClass .
?annotation9 up:activity ?activity10 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity10 up:catalyticActivity ;
up:enzymeClass .
?annotation11 up:cofactor chebi:18420 ;
rdf:type up:Cofactor_Annotation .
?annotation12 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the GlnE family.' .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
rdf:type up:Region_Annotation ;
rdfs:comment 'Adenylyl removase' .
?pfsb15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfs19 up:annotation ?annotation20 .
?annotation20 faldo:begin ?pfsb21 ;
faldo:end ?pfse22 ;
rdf:type up:Region_Annotation ;
rdfs:comment 'Adenylyl transferase' .
?pfsb21 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?pfse22 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
_:286639 a rdf:Statement ;
up:attribution _:286612 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:286640 a rdf:Statement ;
up:attribution _:286613 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:286641 a rdf:Statement ;
up:attribution _:286614 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:286642 a rdf:Statement ;
up:attribution _:286617 ;
rdf:subject ?this ;
rdf:predicate up:domain ;
rdf:object ?namedpart3 .
_:286643 a rdf:Statement ;
up:attribution _:286620 ;
rdf:subject ?this ;
rdf:predicate up:domain ;
rdf:object ?namedpart4 .
_:286644 a rdf:Statement ;
up:attribution _:286621 ;
rdf:subject ?gene5 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene5 .
_:286645 a rdf:Statement ;
up:attribution _:286622 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:286646 a rdf:Statement ;
up:attribution _:286623 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:286647 a rdf:Statement ;
up:attribution _:286624 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:286648 a rdf:Statement ;
up:attribution _:286625 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:286649 a rdf:Statement ;
up:attribution _:286626 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:286650 a rdf:Statement ;
up:attribution _:286627 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:286651 a rdf:Statement ;
up:attribution _:286628 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:460 .
_:286652 a rdf:Statement ;
up:attribution _:286629 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:511 .
_:286653 a rdf:Statement ;
up:attribution _:286630 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:286654 a rdf:Statement ;
up:attribution _:286631 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:548 .
_:286655 a rdf:Statement ;
up:attribution _:286632 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:286656 a rdf:Statement ;
up:attribution _:286633 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0000287 .
_:286657 a rdf:Statement ;
up:attribution _:286634 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005524 .
_:286658 a rdf:Statement ;
up:attribution _:286635 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008882 .
_:286659 a rdf:Statement ;
up:attribution _:286636 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0000820 .
_:286660 a rdf:Statement ;
up:source unirule:MF_00802 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:286661 a rdf:Statement ;
up:attribution _:286637 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:286662 a rdf:Statement ;
up:source unirule:MF_00802 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
_:286663 a rdf:Statement ;
up:attribution _:286638 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00802
#Rule MF_00802 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-01-26
VALUES ?supertaxon25 {taxon:201174 taxon:1224}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00802 .
?thisOrganism rdfs:subClassOf+ ?supertaxon25 .
BIND(URI(CONCAT(STR(?this), '#MF_00802a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a3')) AS ?namedpart3) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a4')) AS ?namedpart4) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a9')) AS ?annotation9) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a11')) AS ?annotation11) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a12')) AS ?annotation12) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch30 faldo:location ?templateMotifSequenceMatchRegionP3087031 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3087033 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP30870MF_0080226 .
?templateMotifSequenceMatchRegionP3087031 faldo:begin ?templateMotifSequenceMatchBeginP3087032 .
?templateMotifSequenceMatchBeginP3087032 faldo:position ?templateMotifSequenceMatchBeginPositionP3087027 ;
faldo:reference isoform:P30870-1 .
?templateMotifSequenceProfileAlignmentOperationP3087033 edam:has_input signature:MF_00802 ;
rdf:type edam:operation_0300 .
?targetMotifMatch34 faldo:location ?targetMotifMatchRegionMatch35 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0080237 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP30870MF_0080228 .
?targetMotifMatchRegionMatch35 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0080236 .
?targetMotifMatchRegionMatchBeginMF_0080236 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0080229 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0080237 edam:has_input signature:MF_00802 ;
rdf:type edam:operation_0300 .
BIND(1 AS ?thisPositionOn17) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30870MF_0080226, 1, (STRLEN(?templateMotifCigarP30870MF_0080226) - STRLEN(REPLACE(?templateMotifCigarP30870MF_0080226, CONCAT('^(?:-*[^-]){', STR(((440 - ?templateMotifSequenceMatchBeginPositionP3087027) + 1)), '}'), '')))), '[a-z]', '')) AS ?step138) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30870MF_0080228, 1, (STRLEN(?targetMotifMatchCigarP30870MF_0080228) - STRLEN(REPLACE(?targetMotifMatchCigarP30870MF_0080228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30870MF_0080228, 1, (STRLEN(?targetMotifMatchCigarP30870MF_0080228) - STRLEN(REPLACE(?targetMotifMatchCigarP30870MF_0080228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), '')))), '[^-]', ''))) AS ?step239) .
BIND(((?step239 + ?targetMotifMatchRegionMatchBeginPositionMF_0080229) - 1) AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t40) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse16) .
FILTER ((BOUND(?thisPositionOn17) && BOUND(?thisPositionOn18))) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch45 faldo:location ?templateMotifSequenceMatchRegionP3087046 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3087048 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP30870MF_0080241 .
?templateMotifSequenceMatchRegionP3087046 faldo:begin ?templateMotifSequenceMatchBeginP3087047 .
?templateMotifSequenceMatchBeginP3087047 faldo:position ?templateMotifSequenceMatchBeginPositionP3087042 ;
faldo:reference isoform:P30870-1 .
?templateMotifSequenceProfileAlignmentOperationP3087048 edam:has_input signature:MF_00802 ;
rdf:type edam:operation_0300 .
?targetMotifMatch49 faldo:location ?targetMotifMatchRegionMatch50 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0080252 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP30870MF_0080243 .
?targetMotifMatchRegionMatch50 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0080251 .
?targetMotifMatchRegionMatchBeginMF_0080251 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0080244 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0080252 edam:has_input signature:MF_00802 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30870MF_0080241, 1, (STRLEN(?templateMotifCigarP30870MF_0080241) - STRLEN(REPLACE(?templateMotifCigarP30870MF_0080241, CONCAT('^(?:-*[^-]){', STR(((449 - ?templateMotifSequenceMatchBeginPositionP3087042) + 1)), '}'), '')))), '[a-z]', '')) AS ?step153) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30870MF_0080243, 1, (STRLEN(?targetMotifMatchCigarP30870MF_0080243) - STRLEN(REPLACE(?targetMotifMatchCigarP30870MF_0080243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30870MF_0080243, 1, (STRLEN(?targetMotifMatchCigarP30870MF_0080243) - STRLEN(REPLACE(?targetMotifMatchCigarP30870MF_0080243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), '')))), '[^-]', ''))) AS ?step254) .
BIND(((?step254 + ?targetMotifMatchRegionMatchBeginPositionMF_0080244) - 1) AS ?thisPositionOn23) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn24) .
BIND(?this AS ?pfs1t55) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb21) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse22) .
FILTER ((BOUND(?thisPositionOn23) && BOUND(?thisPositionOn24))) .
BIND(URI(CONCAT(STR(?this), '#MF_00802a20')) AS ?annotation20) .
BIND(?this AS ?pfs19) .
}
}
"xsd:string |
