| http://purl.uniprot.org/unirules/MF_00838#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:297709 up:source unirule:MF_00838 .
_:297710 up:source unirule:MF_00838 .
_:297711 up:source unirule:MF_00838 .
_:297712 up:source unirule:MF_00838 .
_:297713 up:source unirule:MF_00838 .
_:297714 up:source unirule:MF_00838 .
_:297715 up:source unirule:MF_00838 .
_:297716 up:source unirule:MF_00838 .
_:297717 up:source unirule:MF_00838 .
_:297718 up:source unirule:MF_00838 .
_:297719 up:source unirule:MF_00838 .
_:297720 up:source unirule:MF_00838 .
_:297721 up:source unirule:MF_00838 .
_:297722 up:source unirule:MF_00838 .
_:297723 up:source unirule:MF_00838 .
_:297724 up:source unirule:MF_00838 .
_:297725 up:source unirule:MF_00838 .
_:297726 up:source unirule:MF_00838 .
_:297727 up:source unirule:MF_00838 .
_:297728 up:source unirule:MF_00838 .
_:297729 up:source unirule:MF_00838 .
_:297730 up:source unirule:MF_00838 .
_:297731 up:source unirule:MF_00838 .
_:297732 up:source unirule:MF_00838 .
_:297733 up:source unirule:MF_00838 .
_:297734 up:source unirule:MF_00838 .
_:297735 up:source unirule:MF_00838 .
_:297736 up:source unirule:MF_00838 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0004016 ,
GO:0005524 ,
GO:0016779 ,
keyword:1003 ,
keyword:1133 ,
keyword:472 ,
keyword:547 ,
keyword:548 ,
keyword:67 ,
keyword:808 ,
keyword:812 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.7.7.85' ;
up:fullName 'Diadenylate cyclase' ;
up:shortName 'DAC' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Cyclic-di-AMP synthase' ;
up:shortName 'c-di-AMP synthase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'dacB' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Subunit_Annotation ;
rdfs:comment 'Probably oligomerizes.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the adenylate cyclase family. DacB/CdaS subfamily.' .
?case8 up:classifiedWith keyword:997 .
?sam9 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane10 faldo:begin ?transmembraneb11 ;
faldo:end ?transmembranee12 .
?transmembraneb11 faldo:position ?transmembranebp13 .
?transmembranee12 faldo:position ?transmembraneep14 .
?keyword15 up:range ?transmembrane10 .
?keyword16 up:range ?transmembrane10 .
?keyword17 up:range ?transmembrane10 .
?sam18 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane19 faldo:begin ?transmembraneb20 ;
faldo:end ?transmembranee21 .
?transmembraneb20 faldo:position ?transmembranebp22 .
?transmembranee21 faldo:position ?transmembraneep23 .
?keyword24 up:range ?transmembrane19 .
?keyword25 up:range ?transmembrane19 .
?keyword26 up:range ?transmembrane19 .
?sam27 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane28 faldo:begin ?transmembraneb29 ;
faldo:end ?transmembranee30 .
?transmembraneb29 faldo:position ?transmembranebp31 .
?transmembranee30 faldo:position ?transmembraneep32 .
?keyword33 up:range ?transmembrane28 .
?keyword34 up:range ?transmembrane28 .
?keyword35 up:range ?transmembrane28 .
_:297737 a rdf:Statement ;
up:attribution _:297709 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:297738 a rdf:Statement ;
up:attribution _:297710 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:297739 a rdf:Statement ;
up:attribution _:297711 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:297740 a rdf:Statement ;
up:attribution _:297712 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:297741 a rdf:Statement ;
up:attribution _:297713 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:297742 a rdf:Statement ;
up:attribution _:297714 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:297743 a rdf:Statement ;
up:attribution _:297715 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:297744 a rdf:Statement ;
up:attribution _:297716 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:297745 a rdf:Statement ;
up:attribution _:297717 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:297746 a rdf:Statement ;
up:attribution _:297718 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:297747 a rdf:Statement ;
up:attribution _:297719 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:297748 a rdf:Statement ;
up:attribution _:297720 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:548 .
_:297749 a rdf:Statement ;
up:attribution _:297721 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:297750 a rdf:Statement ;
up:attribution _:297722 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:297751 a rdf:Statement ;
up:attribution _:297723 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:297752 a rdf:Statement ;
up:attribution _:297724 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004016 .
_:297753 a rdf:Statement ;
up:attribution _:297725 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005524 .
_:297754 a rdf:Statement ;
up:attribution _:297726 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016779 .
_:297755 a rdf:Statement ;
up:attribution _:297727 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:297756 a rdf:Statement ;
up:attribution _:297728 ;
rdf:subject ?sam9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:297757 a rdf:Statement ;
up:attribution _:297729 ;
rdf:subject ?sam9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:297758 a rdf:Statement ;
up:attribution _:297730 ;
rdf:subject ?sam9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:297759 a rdf:Statement ;
up:attribution _:297731 ;
rdf:subject ?sam18 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:297760 a rdf:Statement ;
up:attribution _:297732 ;
rdf:subject ?sam18 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:297761 a rdf:Statement ;
up:attribution _:297733 ;
rdf:subject ?sam18 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:297762 a rdf:Statement ;
up:attribution _:297734 ;
rdf:subject ?sam27 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:297763 a rdf:Statement ;
up:attribution _:297735 ;
rdf:subject ?sam27 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:297764 a rdf:Statement ;
up:attribution _:297736 ;
rdf:subject ?sam27 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00838
#Rule MF_00838 Created by:? on:2016-03-17 Modified by:Catherine Rivoire on:2024-03-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00838 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00838a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a7')) AS ?annotation7) .
OPTIONAL {
?this a up:Protein .
{
?this up:proteome .
} UNION {
?this up:proteome ?p36 .
?p36 skos:narrower .
}
BIND(?this AS ?case8) .
}
OPTIONAL {
?this up:annotation ?samtransmembrane37 ;
up:sequence ?thisSequence .
?samtransmembrane37 up:range ?samtransmembraner38 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner38 faldo:begin ?samtransmembraneb39 ;
faldo:end ?samtransmembranee40 .
?samtransmembraneb39 faldo:position ?samtransmembranebp41 ;
faldo:reference ?thisSequence .
?samtransmembranee40 faldo:position ?samtransmembraneep42 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam9) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00838a15')) AS ?keyword15) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a16')) AS ?keyword16) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a17')) AS ?keyword17) .
OPTIONAL {
?this up:annotation ?samtransmembrane43 ;
up:sequence ?thisSequence .
?samtransmembrane43 up:range ?samtransmembraner44 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner44 faldo:begin ?samtransmembraneb45 ;
faldo:end ?samtransmembranee46 .
?samtransmembraneb45 faldo:position ?samtransmembranebp47 ;
faldo:reference ?thisSequence .
?samtransmembranee46 faldo:position ?samtransmembraneep48 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam18) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00838a24')) AS ?keyword24) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a25')) AS ?keyword25) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a26')) AS ?keyword26) .
OPTIONAL {
?this up:annotation ?samtransmembrane49 ;
up:sequence ?thisSequence .
?samtransmembrane49 up:range ?samtransmembraner50 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner50 faldo:begin ?samtransmembraneb51 ;
faldo:end ?samtransmembranee52 .
?samtransmembraneb51 faldo:position ?samtransmembranebp53 ;
faldo:reference ?thisSequence .
?samtransmembranee52 faldo:position ?samtransmembraneep54 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam27) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00838a33')) AS ?keyword33) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a34')) AS ?keyword34) .
BIND(URI(CONCAT(STR(?this), '#MF_00838a35')) AS ?keyword35) .
}
"xsd:string |
