| http://purl.uniprot.org/unirules/MF_01082#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:376822 up:source unirule:MF_01082 .
_:376823 up:source unirule:MF_01082 .
_:376824 up:source unirule:MF_01082 .
_:376825 up:source unirule:MF_01082 .
_:376826 up:source unirule:MF_01082 .
_:376827 up:source unirule:MF_01082 .
_:376828 up:source unirule:MF_01082 .
_:376829 up:source unirule:MF_01082 .
_:376830 up:source unirule:MF_01082 .
_:376831 up:source unirule:MF_01082 .
_:376832 up:source unirule:MF_01082 .
_:376833 up:source unirule:MF_01082 .
_:376834 up:source unirule:MF_01082 .
_:376835 up:source unirule:MF_01082 .
_:376836 up:source unirule:MF_01082 .
_:376837 up:source unirule:MF_01082 .
_:376838 up:source unirule:MF_01082 .
_:376839 up:source unirule:MF_01082 .
_:376840 up:source unirule:MF_01082 .
?this up:annotation ?annotation1 ,
?annotation3 ;
up:classifiedWith GO:0009982 ,
GO:0031119 ,
keyword:413 ,
keyword:819 .
?gene0 skos:prefLabel 'truD' .
?annotation1 up:activity ?activity2 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity2 up:catalyticActivity ;
up:enzymeClass .
?annotation3 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the pseudouridine synthase TruD family.' .
?case4 up:alternativeName ?name6 ,
?name7 ,
?name8 ;
up:recommendedName ?name5 .
?name5 up:ecName '5.4.99.27' ;
up:fullName 'Probable tRNA pseudouridine synthase D' ;
rdf:type up:Structured_Name .
?name6 up:fullName 'tRNA pseudouridine(13) synthase' ;
rdf:type up:Structured_Name .
?name7 up:fullName 'tRNA pseudouridylate synthase D' ;
rdf:type up:Structured_Name .
?name8 up:fullName 'tRNA-uridine isomerase D' ;
rdf:type up:Structured_Name .
?case9 up:alternativeName ?name11 ,
?name12 ,
?name13 ;
up:recommendedName ?name10 .
?name10 up:ecName '5.4.99.27' ;
up:fullName 'tRNA pseudouridine synthase D' ;
rdf:type up:Structured_Name .
?name11 up:fullName 'tRNA pseudouridine(13) synthase' ;
rdf:type up:Structured_Name .
?name12 up:fullName 'tRNA pseudouridylate synthase D' ;
rdf:type up:Structured_Name .
?name13 up:fullName 'tRNA-uridine isomerase D' ;
rdf:type up:Structured_Name .
?pfs14 up:annotation ?annotation15 .
?annotation15 faldo:begin ?pfsb16 ;
faldo:end ?pfse17 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Nucleophile' .
?pfsb16 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse17 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf ?molecule25 .
?molecule25 rdfs:label 'substrate' .
?pfs28 up:annotation ?annotation29 .
?annotation29 faldo:begin ?pfsb30 ;
faldo:end ?pfse31 ;
up:ligand ?ligand32 ;
rdf:type up:Binding_Site_Annotation .
?pfsb30 faldo:position ?thisPositionOn34 ;
rdf:type faldo:ExactPosition .
?pfse31 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?ligand32 rdfs:subClassOf ?molecule33 .
?molecule33 rdfs:label 'substrate' .
?pfs36 up:annotation ?annotation37 .
?annotation37 faldo:begin ?pfsb38 ;
faldo:end ?pfse39 ;
up:ligand ?ligand40 ;
rdf:type up:Binding_Site_Annotation .
?pfsb38 faldo:position ?thisPositionOn42 ;
rdf:type faldo:ExactPosition .
?pfse39 faldo:position ?thisPositionOn43 ;
rdf:type faldo:ExactPosition .
?ligand40 rdfs:subClassOf ?molecule41 .
?molecule41 rdfs:label 'substrate' .
_:376841 a rdf:Statement ;
up:attribution _:376822 ;
rdf:subject ?gene0 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene0 .
_:376842 a rdf:Statement ;
up:attribution _:376823 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:376843 a rdf:Statement ;
up:attribution _:376824 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:376844 a rdf:Statement ;
up:attribution _:376825 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:413 .
_:376845 a rdf:Statement ;
up:attribution _:376826 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:819 .
_:376846 a rdf:Statement ;
up:attribution _:376827 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009982 .
_:376847 a rdf:Statement ;
up:attribution _:376828 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0031119 .
_:376848 a rdf:Statement ;
up:attribution _:376829 ;
rdf:subject ?case4 ;
rdf:predicate up:recommendedName ;
rdf:object ?name5 .
_:376849 a rdf:Statement ;
up:attribution _:376830 ;
rdf:subject ?case4 ;
rdf:predicate up:alternativeName ;
rdf:object ?name6 .
_:376850 a rdf:Statement ;
up:attribution _:376831 ;
rdf:subject ?case4 ;
rdf:predicate up:alternativeName ;
rdf:object ?name7 .
_:376851 a rdf:Statement ;
up:attribution _:376832 ;
rdf:subject ?case4 ;
rdf:predicate up:alternativeName ;
rdf:object ?name8 .
_:376852 a rdf:Statement ;
up:attribution _:376833 ;
rdf:subject ?case9 ;
rdf:predicate up:recommendedName ;
rdf:object ?name10 .
_:376853 a rdf:Statement ;
up:attribution _:376834 ;
rdf:subject ?case9 ;
rdf:predicate up:alternativeName ;
rdf:object ?name11 .
_:376854 a rdf:Statement ;
up:attribution _:376835 ;
rdf:subject ?case9 ;
rdf:predicate up:alternativeName ;
rdf:object ?name12 .
_:376855 a rdf:Statement ;
up:attribution _:376836 ;
rdf:subject ?case9 ;
rdf:predicate up:alternativeName ;
rdf:object ?name13 .
_:376856 a rdf:Statement ;
up:source unirule:MF_01082 ;
rdf:subject ?pfs14 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:376857 a rdf:Statement ;
up:attribution _:376837 ;
rdf:subject ?pfs14 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:376858 a rdf:Statement ;
up:source unirule:MF_01082 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:376859 a rdf:Statement ;
up:attribution _:376838 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:376860 a rdf:Statement ;
up:source unirule:MF_01082 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:376861 a rdf:Statement ;
up:attribution _:376839 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:376862 a rdf:Statement ;
up:source unirule:MF_01082 ;
rdf:subject ?pfs36 ;
rdf:predicate up:annotation ;
rdf:object ?annotation37 .
_:376863 a rdf:Statement ;
up:attribution _:376840 ;
rdf:subject ?pfs36 ;
rdf:predicate up:annotation ;
rdf:object ?annotation37 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01082
#Rule MF_01082 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
VALUES ?supertaxon44 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01082 .
?thisOrganism rdfs:subClassOf+ ?supertaxon44 .
BIND(URI(CONCAT(STR(?this), '#MF_01082a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a3')) AS ?annotation3) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch49 faldo:location ?templateMotifSequenceMatchRegionQ5726150 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5726152 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ57261MF_0108245 .
?templateMotifSequenceMatchRegionQ5726150 faldo:begin ?templateMotifSequenceMatchBeginQ5726151 .
?templateMotifSequenceMatchBeginQ5726151 faldo:position ?templateMotifSequenceMatchBeginPositionQ5726146 ;
faldo:reference isoform:Q57261-1 .
?templateMotifSequenceProfileAlignmentOperationQ5726152 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?targetMotifMatch53 faldo:location ?targetMotifMatchRegionMatch54 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0108256 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ57261MF_0108247 .
?targetMotifMatchRegionMatch54 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0108255 .
?targetMotifMatchRegionMatchBeginMF_0108255 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0108248 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0108256 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57261MF_0108245, 1, (STRLEN(?templateMotifCigarQ57261MF_0108245) - STRLEN(REPLACE(?templateMotifCigarQ57261MF_0108245, CONCAT('^(?:-*[^-]){', STR(((80 - ?templateMotifSequenceMatchBeginPositionQ5726146) + 1)), '}'), '')))), '[a-z]', '')) AS ?step157) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57261MF_0108247, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108247) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57261MF_0108247, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108247) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step157), '}'), '')))), '[^-]', ''))) AS ?step258) .
BIND(((?step258 + ?targetMotifMatchRegionMatchBeginPositionMF_0108248) - 1) AS ?thisPositionOn18) .
BIND(?thisPositionOn18 AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t59) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb16) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse17) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a15')) AS ?annotation15) .
BIND(?this AS ?pfs14) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch64 faldo:location ?templateMotifSequenceMatchRegionQ5726165 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5726167 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ57261MF_0108260 .
?templateMotifSequenceMatchRegionQ5726165 faldo:begin ?templateMotifSequenceMatchBeginQ5726166 .
?templateMotifSequenceMatchBeginQ5726166 faldo:position ?templateMotifSequenceMatchBeginPositionQ5726161 ;
faldo:reference isoform:Q57261-1 .
?templateMotifSequenceProfileAlignmentOperationQ5726167 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?targetMotifMatch68 faldo:location ?targetMotifMatchRegionMatch69 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0108271 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ57261MF_0108262 .
?targetMotifMatchRegionMatch69 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0108270 .
?targetMotifMatchRegionMatchBeginMF_0108270 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0108263 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0108271 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57261MF_0108260, 1, (STRLEN(?templateMotifCigarQ57261MF_0108260) - STRLEN(REPLACE(?templateMotifCigarQ57261MF_0108260, CONCAT('^(?:-*[^-]){', STR(((27 - ?templateMotifSequenceMatchBeginPositionQ5726161) + 1)), '}'), '')))), '[a-z]', '')) AS ?step172) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57261MF_0108262, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108262) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57261MF_0108262, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108262) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), '')))), '[^-]', ''))) AS ?step273) .
BIND(((?step273 + ?targetMotifMatchRegionMatchBeginPositionMF_0108263) - 1) AS ?thisPositionOn26) .
BIND(?thisPositionOn26 AS ?thisPositionOn27) .
BIND(?this AS ?pfs2t74) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'F')) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch79 faldo:location ?templateMotifSequenceMatchRegionQ5726180 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5726182 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ57261MF_0108275 .
?templateMotifSequenceMatchRegionQ5726180 faldo:begin ?templateMotifSequenceMatchBeginQ5726181 .
?templateMotifSequenceMatchBeginQ5726181 faldo:position ?templateMotifSequenceMatchBeginPositionQ5726176 ;
faldo:reference isoform:Q57261-1 .
?templateMotifSequenceProfileAlignmentOperationQ5726182 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?targetMotifMatch83 faldo:location ?targetMotifMatchRegionMatch84 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0108286 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ57261MF_0108277 .
?targetMotifMatchRegionMatch84 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0108285 .
?targetMotifMatchRegionMatchBeginMF_0108285 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0108278 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0108286 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57261MF_0108275, 1, (STRLEN(?templateMotifCigarQ57261MF_0108275) - STRLEN(REPLACE(?templateMotifCigarQ57261MF_0108275, CONCAT('^(?:-*[^-]){', STR(((129 - ?templateMotifSequenceMatchBeginPositionQ5726176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step187) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57261MF_0108277, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108277) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57261MF_0108277, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108277) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), '')))), '[^-]', ''))) AS ?step288) .
BIND(((?step288 + ?targetMotifMatchRegionMatchBeginPositionMF_0108278) - 1) AS ?thisPositionOn34) .
BIND(?thisPositionOn34 AS ?thisPositionOn35) .
BIND(?this AS ?pfs2t89) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse31) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn34, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a29')) AS ?annotation29) .
BIND(?this AS ?pfs28) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch94 faldo:location ?templateMotifSequenceMatchRegionQ5726195 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5726197 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ57261MF_0108290 .
?templateMotifSequenceMatchRegionQ5726195 faldo:begin ?templateMotifSequenceMatchBeginQ5726196 .
?templateMotifSequenceMatchBeginQ5726196 faldo:position ?templateMotifSequenceMatchBeginPositionQ5726191 ;
faldo:reference isoform:Q57261-1 .
?templateMotifSequenceProfileAlignmentOperationQ5726197 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?targetMotifMatch98 faldo:location ?targetMotifMatchRegionMatch99 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01082101 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ57261MF_0108292 .
?targetMotifMatchRegionMatch99 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01082100 .
?targetMotifMatchRegionMatchBeginMF_01082100 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0108293 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01082101 edam:has_input signature:MF_01082 ;
rdf:type edam:operation_0300 .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:91347 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57261MF_0108290, 1, (STRLEN(?templateMotifCigarQ57261MF_0108290) - STRLEN(REPLACE(?templateMotifCigarQ57261MF_0108290, CONCAT('^(?:-*[^-]){', STR(((329 - ?templateMotifSequenceMatchBeginPositionQ5726191) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1102) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57261MF_0108292, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108292) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57261MF_0108292, 1, (STRLEN(?targetMotifMatchCigarQ57261MF_0108292) - STRLEN(REPLACE(?targetMotifMatchCigarQ57261MF_0108292, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), '')))), '[^-]', ''))) AS ?step2103) .
BIND(((?step2103 + ?targetMotifMatchRegionMatchBeginPositionMF_0108293) - 1) AS ?thisPositionOn42) .
BIND(?thisPositionOn42 AS ?thisPositionOn43) .
BIND(?this AS ?pfs2t104) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb38) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse39) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'F')) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a37')) AS ?annotation37) .
BIND(?this AS ?pfs36) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(?this AS ?case4) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a5')) AS ?name5) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a6')) AS ?name6) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a7')) AS ?name7) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a8')) AS ?name8) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(?this AS ?case9) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a10')) AS ?name10) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a11')) AS ?name11) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a12')) AS ?name12) .
BIND(URI(CONCAT(STR(?this), '#MF_01082a13')) AS ?name13) .
}
}
"xsd:string |
