| http://purl.uniprot.org/unirules/MF_01164#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:406282 up:source unirule:MF_01164 .
_:406283 up:source unirule:MF_01164 .
_:406284 up:source unirule:MF_01164 .
_:406285 up:source unirule:MF_01164 .
_:406286 up:source unirule:MF_01164 .
_:406287 up:source unirule:MF_01164 .
_:406288 up:source unirule:MF_01164 .
_:406289 up:source unirule:MF_01164 .
_:406290 up:source unirule:MF_01164 .
_:406291 up:source unirule:MF_01164 .
_:406292 up:source unirule:MF_01164 .
_:406293 up:source unirule:MF_01164 .
_:406294 up:source unirule:MF_01164 .
_:406295 up:source unirule:MF_01164 .
_:406296 up:source unirule:MF_01164 .
_:406297 up:source unirule:MF_01164 .
_:406298 up:source unirule:MF_01164 .
_:406299 up:source unirule:MF_01164 .
_:406300 up:source unirule:MF_01164 .
_:406301 up:source unirule:MF_01164 .
_:406302 up:source unirule:MF_01164 .
_:406303 up:source unirule:MF_01164 .
_:406304 up:source unirule:MF_01164 .
_:406305 up:source unirule:MF_01164 .
_:406306 up:source unirule:MF_01164 .
_:406307 up:source unirule:MF_01164 .
_:406308 up:source unirule:MF_01164 .
_:406309 up:source unirule:MF_01164 .
_:406310 up:source unirule:MF_01164 .
_:406311 up:source unirule:MF_01164 .
_:406312 up:source unirule:MF_01164 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation8 ;
up:classifiedWith GO:0005886 ,
GO:0009103 ,
GO:0009245 ,
GO:0016780 ,
GO:0036108 ,
keyword:1003 ,
keyword:1133 ,
keyword:328 ,
keyword:441 ,
keyword:443 ,
keyword:444 ,
keyword:448 ,
keyword:46 ,
keyword:472 ,
keyword:808 ,
keyword:812 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.4.2.53' ;
up:fullName 'Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Undecaprenyl-phosphate Ara4FN transferase' ;
up:shortName 'Ara4FN transferase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'arnC' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Glycolipid biosynthesis; 4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate biosynthesis; 4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate from UDP-4-deoxy-4-formamido-beta-L-arabinose and undecaprenyl phosphate: step 1/2.' .
?annotation7 a up:Pathway_Annotation ;
rdfs:comment 'Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis.' .
?annotation8 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the glycosyltransferase 2 family.' .
?case9 up:classifiedWith keyword:997 .
?sam11 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane12 faldo:begin ?transmembraneb13 ;
faldo:end ?transmembranee14 .
?transmembraneb13 faldo:position ?transmembranebp15 .
?transmembranee14 faldo:position ?transmembraneep16 .
?keyword17 up:range ?transmembrane12 .
?keyword18 up:range ?transmembrane12 .
?keyword19 up:range ?transmembrane12 .
?sam20 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane21 faldo:begin ?transmembraneb22 ;
faldo:end ?transmembranee23 .
?transmembraneb22 faldo:position ?transmembranebp24 .
?transmembranee23 faldo:position ?transmembraneep25 .
?keyword26 up:range ?transmembrane21 .
?keyword27 up:range ?transmembrane21 .
?keyword28 up:range ?transmembrane21 .
_:406313 a rdf:Statement ;
up:attribution _:406282 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:406314 a rdf:Statement ;
up:attribution _:406283 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:406315 a rdf:Statement ;
up:attribution _:406284 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:406316 a rdf:Statement ;
up:attribution _:406285 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:406317 a rdf:Statement ;
up:attribution _:406286 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:406318 a rdf:Statement ;
up:attribution _:406287 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:406319 a rdf:Statement ;
up:attribution _:406288 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:406320 a rdf:Statement ;
up:attribution _:406289 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:406321 a rdf:Statement ;
up:attribution _:406290 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:46 .
_:406322 a rdf:Statement ;
up:attribution _:406291 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:406323 a rdf:Statement ;
up:attribution _:406292 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:328 .
_:406324 a rdf:Statement ;
up:attribution _:406293 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:441 .
_:406325 a rdf:Statement ;
up:attribution _:406294 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:444 .
_:406326 a rdf:Statement ;
up:attribution _:406295 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:443 .
_:406327 a rdf:Statement ;
up:attribution _:406296 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:448 .
_:406328 a rdf:Statement ;
up:attribution _:406297 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:406329 a rdf:Statement ;
up:attribution _:406298 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:406330 a rdf:Statement ;
up:attribution _:406299 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:406331 a rdf:Statement ;
up:attribution _:406300 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:406332 a rdf:Statement ;
up:attribution _:406301 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016780 .
_:406333 a rdf:Statement ;
up:attribution _:406302 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009245 .
_:406334 a rdf:Statement ;
up:attribution _:406303 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009103 .
_:406335 a rdf:Statement ;
up:attribution _:406304 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0036108 .
_:406336 a rdf:Statement ;
up:attribution _:406305 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:406337 a rdf:Statement ;
up:attribution _:406306 ;
rdf:subject ?case9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:406338 a rdf:Statement ;
up:attribution _:406307 ;
rdf:subject ?sam11 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:406339 a rdf:Statement ;
up:attribution _:406308 ;
rdf:subject ?sam11 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:406340 a rdf:Statement ;
up:attribution _:406309 ;
rdf:subject ?sam11 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:406341 a rdf:Statement ;
up:attribution _:406310 ;
rdf:subject ?sam20 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:406342 a rdf:Statement ;
up:attribution _:406311 ;
rdf:subject ?sam20 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:406343 a rdf:Statement ;
up:attribution _:406312 ;
rdf:subject ?sam20 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01164
#Rule MF_01164 Created by:? on:2005-05-27 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01164 .
?thisOrganism rdfs:subClassOf+ taxon:1236 .
BIND(URI(CONCAT(STR(?this), '#MF_01164a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a8')) AS ?annotation8) .
OPTIONAL {
?this a up:Protein .
{
?this up:proteome .
} UNION {
?this up:proteome ?p29 .
?p29 skos:narrower .
}
BIND(?this AS ?case9) .
}
OPTIONAL {
?this a up:Protein .
{
FILTER (! (EXISTS {
{
?this up:proteome .
} UNION {
?this up:proteome ?p30 .
?p30 skos:narrower .
}
})) .
} UNION {
{
?this up:proteome .
} UNION {
?this up:proteome ?p31 .
?p31 skos:narrower .
}
}
BIND(?this AS ?case10) .
}
OPTIONAL {
?this up:annotation ?samtransmembrane32 ;
up:sequence ?thisSequence .
?samtransmembrane32 up:range ?samtransmembraner33 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner33 faldo:begin ?samtransmembraneb34 ;
faldo:end ?samtransmembranee35 .
?samtransmembraneb34 faldo:position ?samtransmembranebp36 ;
faldo:reference ?thisSequence .
?samtransmembranee35 faldo:position ?samtransmembraneep37 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam11) .
}
BIND(URI(CONCAT(STR(?this), '#MF_01164a17')) AS ?keyword17) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a18')) AS ?keyword18) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a19')) AS ?keyword19) .
OPTIONAL {
?this up:annotation ?samtransmembrane38 ;
up:sequence ?thisSequence .
?samtransmembrane38 up:range ?samtransmembraner39 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner39 faldo:begin ?samtransmembraneb40 ;
faldo:end ?samtransmembranee41 .
?samtransmembraneb40 faldo:position ?samtransmembranebp42 ;
faldo:reference ?thisSequence .
?samtransmembranee41 faldo:position ?samtransmembraneep43 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam20) .
}
BIND(URI(CONCAT(STR(?this), '#MF_01164a26')) AS ?keyword26) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a27')) AS ?keyword27) .
BIND(URI(CONCAT(STR(?this), '#MF_01164a28')) AS ?keyword28) .
}
"xsd:string |
