| http://purl.uniprot.org/unirules/MF_01410#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:510458 up:source unirule:MF_01410 .
_:510459 up:source unirule:MF_01410 .
_:510460 up:source unirule:MF_01410 .
_:510461 up:source unirule:MF_01410 .
_:510462 up:source unirule:MF_01410 .
_:510463 up:source unirule:MF_01410 .
_:510464 up:source unirule:MF_01410 .
_:510465 up:source unirule:MF_01410 .
_:510466 up:source unirule:MF_01410 .
_:510467 up:source unirule:MF_01410 .
_:510468 up:source unirule:MF_01410 .
_:510469 up:source unirule:MF_01410 .
_:510470 up:source unirule:MF_01410 .
_:510471 up:source unirule:MF_01410 .
_:510472 up:source unirule:MF_01410 .
_:510473 up:source unirule:MF_01410 .
_:510474 up:source unirule:MF_01410 .
_:510475 up:source unirule:MF_01410 .
_:510476 up:source unirule:MF_01410 .
_:510477 up:source unirule:MF_01410 .
_:510478 up:source unirule:MF_01410 .
_:510479 up:source unirule:MF_01410 .
_:510480 up:source unirule:MF_01410 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation8 ,
?annotation10 ;
up:classifiedWith GO:0004347 ,
GO:0005737 ,
GO:0006094 ,
GO:0006096 ,
keyword:312 ,
keyword:324 ,
keyword:413 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '5.3.1.9' ;
up:fullName 'Glucose-6-phosphate isomerase' ;
up:shortName 'GPI' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Phosphoglucose isomerase' ;
up:shortName 'PGI' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'Phosphohexose isomerase' ;
up:shortName 'PHI' ;
rdf:type up:Structured_Name .
?gene3 skos:prefLabel 'pgiA' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Pathway_Annotation ;
rdfs:comment 'Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 2/4.' .
?annotation7 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation8 a up:Subcellular_Location_Annotation .
?annotation8li9 up:cellularComponent .
?annotation10 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the archaeal-type GPI family.' .
?case11 up:classifiedWith keyword:408 ,
keyword:479 .
?pfs12 up:annotation ?annotation13 ,
?annotation19 ,
?annotation25 ,
?annotation31 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation .
?pfsb14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf chebi:24875 .
?annotation19 faldo:begin ?pfsb20 ;
faldo:end ?pfse21 ;
up:ligand ?ligand22 ;
rdf:type up:Binding_Site_Annotation .
?pfsb20 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?pfse21 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?ligand22 rdfs:subClassOf chebi:24875 .
?annotation25 faldo:begin ?pfsb26 ;
faldo:end ?pfse27 ;
up:ligand ?ligand28 ;
rdf:type up:Binding_Site_Annotation .
?pfsb26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?pfse27 faldo:position ?thisPositionOn30 ;
rdf:type faldo:ExactPosition .
?ligand28 rdfs:subClassOf chebi:24875 .
?annotation31 faldo:begin ?pfsb32 ;
faldo:end ?pfse33 ;
up:ligand ?ligand34 ;
rdf:type up:Binding_Site_Annotation .
?pfsb32 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?pfse33 faldo:position ?thisPositionOn36 ;
rdf:type faldo:ExactPosition .
?ligand34 rdfs:subClassOf chebi:24875 .
_:510481 a rdf:Statement ;
up:attribution _:510458 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:510482 a rdf:Statement ;
up:attribution _:510459 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:510483 a rdf:Statement ;
up:attribution _:510460 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:510484 a rdf:Statement ;
up:attribution _:510461 ;
rdf:subject ?gene3 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene3 .
_:510485 a rdf:Statement ;
up:attribution _:510462 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:510486 a rdf:Statement ;
up:attribution _:510463 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:510487 a rdf:Statement ;
up:attribution _:510464 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:510488 a rdf:Statement ;
up:attribution _:510465 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:510489 a rdf:Statement ;
up:attribution _:510466 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:510490 a rdf:Statement ;
up:attribution _:510467 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:510491 a rdf:Statement ;
up:attribution _:510468 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:413 .
_:510492 a rdf:Statement ;
up:attribution _:510469 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:312 .
_:510493 a rdf:Statement ;
up:attribution _:510470 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:324 .
_:510494 a rdf:Statement ;
up:attribution _:510471 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004347 .
_:510495 a rdf:Statement ;
up:attribution _:510472 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006094 .
_:510496 a rdf:Statement ;
up:attribution _:510473 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006096 .
_:510497 a rdf:Statement ;
up:attribution _:510474 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:510498 a rdf:Statement ;
up:attribution _:510475 ;
rdf:subject ?case11 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:408 .
_:510499 a rdf:Statement ;
up:attribution _:510476 ;
rdf:subject ?case11 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:510500 a rdf:Statement ;
up:source unirule:MF_01410 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:510501 a rdf:Statement ;
up:attribution _:510477 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:510502 a rdf:Statement ;
up:source unirule:MF_01410 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:510503 a rdf:Statement ;
up:attribution _:510478 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:510504 a rdf:Statement ;
up:source unirule:MF_01410 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:510505 a rdf:Statement ;
up:attribution _:510479 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:510506 a rdf:Statement ;
up:source unirule:MF_01410 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
_:510507 a rdf:Statement ;
up:attribution _:510480 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01410
#Rule MF_01410 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19
VALUES ?supertaxon37 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01410 .
?thisOrganism rdfs:subClassOf+ ?supertaxon37 .
BIND(URI(CONCAT(STR(?this), '#MF_01410a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01410a10')) AS ?annotation10) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch42 faldo:location ?templateMotifSequenceMatchRegionP8414043 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP8414045 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP84140MF_0141038 .
?templateMotifSequenceMatchRegionP8414043 faldo:begin ?templateMotifSequenceMatchBeginP8414044 .
?templateMotifSequenceMatchBeginP8414044 faldo:position ?templateMotifSequenceMatchBeginPositionP8414039 ;
faldo:reference isoform:P84140-1 .
?templateMotifSequenceProfileAlignmentOperationP8414045 edam:has_input signature:MF_01410 ;
rdf:type edam:operation_0300 .
?targetMotifMatch46 faldo:location ?targetMotifMatchRegionMatch47 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0141049 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP84140MF_0141040 .
?targetMotifMatchRegionMatch47 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0141048 .
?targetMotifMatchRegionMatchBeginMF_0141048 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0141041 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0141049 edam:has_input signature:MF_01410 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP84140MF_0141038, 1, (STRLEN(?templateMotifCigarP84140MF_0141038) - STRLEN(REPLACE(?templateMotifCigarP84140MF_0141038, CONCAT('^(?:-*[^-]){', STR(((89 - ?templateMotifSequenceMatchBeginPositionP8414039) + 1)), '}'), '')))), '[a-z]', '')) AS ?step150) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step150), '}'), '')))), '[^-]', ''))) AS ?step251) .
BIND(((?step251 + ?targetMotifMatchRegionMatchBeginPositionMF_0141041) - 1) AS ?thisPositionOn17) .
BIND(?thisPositionOn17 AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t52) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP84140MF_0141038, 1, (STRLEN(?templateMotifCigarP84140MF_0141038) - STRLEN(REPLACE(?templateMotifCigarP84140MF_0141038, CONCAT('^(?:-*[^-]){', STR(((91 - ?templateMotifSequenceMatchBeginPositionP8414039) + 1)), '}'), '')))), '[a-z]', '')) AS ?step153) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), '')))), '[^-]', ''))) AS ?step254) .
BIND(((?step254 + ?targetMotifMatchRegionMatchBeginPositionMF_0141041) - 1) AS ?thisPositionOn23) .
BIND(?thisPositionOn23 AS ?thisPositionOn24) .
BIND(?this AS ?pfs1t55) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP84140MF_0141038, 1, (STRLEN(?templateMotifCigarP84140MF_0141038) - STRLEN(REPLACE(?templateMotifCigarP84140MF_0141038, CONCAT('^(?:-*[^-]){', STR(((98 - ?templateMotifSequenceMatchBeginPositionP8414039) + 1)), '}'), '')))), '[a-z]', '')) AS ?step156) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), '')))), '[^-]', ''))) AS ?step257) .
BIND(((?step257 + ?targetMotifMatchRegionMatchBeginPositionMF_0141041) - 1) AS ?thisPositionOn29) .
BIND(?thisPositionOn29 AS ?thisPositionOn30) .
BIND(?this AS ?pfs1t58) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'E')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP84140MF_0141038, 1, (STRLEN(?templateMotifCigarP84140MF_0141038) - STRLEN(REPLACE(?templateMotifCigarP84140MF_0141038, CONCAT('^(?:-*[^-]){', STR(((137 - ?templateMotifSequenceMatchBeginPositionP8414039) + 1)), '}'), '')))), '[a-z]', '')) AS ?step159) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP84140MF_0141040, 1, (STRLEN(?targetMotifMatchCigarP84140MF_0141040) - STRLEN(REPLACE(?targetMotifMatchCigarP84140MF_0141040, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step159), '}'), '')))), '[^-]', ''))) AS ?step260) .
BIND(((?step260 + ?targetMotifMatchRegionMatchBeginPositionMF_0141041) - 1) AS ?thisPositionOn35) .
BIND(?thisPositionOn35 AS ?thisPositionOn36) .
BIND(?this AS ?pfs1t61) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfsb32) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfse33) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn35, 1) = 'H')) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag62) .
}
BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag62, ?UNBOUND_VARIABLE) AS ?case11) .
}
"xsd:string |
