| http://purl.uniprot.org/unirules/MF_01662#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:606854 up:source unirule:MF_01662 .
_:606855 up:source unirule:MF_01662 .
_:606856 up:source unirule:MF_01662 .
_:606857 up:source unirule:MF_01662 .
_:606858 up:source unirule:MF_01662 .
_:606859 up:source unirule:MF_01662 .
_:606860 up:source unirule:MF_01662 .
_:606861 up:source unirule:MF_01662 .
_:606862 up:source unirule:MF_01662 .
_:606863 up:source unirule:MF_01662 .
_:606864 up:source unirule:MF_01662 .
_:606865 up:source unirule:MF_01662 .
_:606866 up:source unirule:MF_01662 .
_:606867 up:source unirule:MF_01662 .
_:606868 up:source unirule:MF_01662 .
_:606869 up:source unirule:MF_01662 .
_:606870 up:source unirule:MF_01662 .
_:606871 up:source unirule:MF_01662 .
_:606872 up:source unirule:MF_01662 .
_:606873 up:source unirule:MF_01662 .
_:606874 up:source unirule:MF_01662 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation4 ,
?annotation5 ,
?annotation7 ,
?annotation8 ,
?annotation9 ,
?annotation11 ;
up:classifiedWith GO:0005737 ,
GO:0016853 ,
GO:0042354 ,
keyword:119 ,
keyword:294 ,
keyword:413 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '5.1.3.29' ;
up:fullName 'L-fucose mutarotase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Fucose 1-epimerase' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'Type-2 mutarotase' ;
rdf:type up:Structured_Name .
?gene3 skos:prefLabel 'fucU' .
?annotation4 a up:Function_Annotation ;
rdfs:comment 'Involved in the anomeric conversion of L-fucose.' .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity ;
up:enzymeClass .
?annotation7 a up:Pathway_Annotation ;
rdfs:comment 'Carbohydrate metabolism; L-fucose metabolism.' .
?annotation8 a up:Subunit_Annotation ;
rdfs:comment 'Homodecamer.' .
?annotation9 a up:Subcellular_Location_Annotation .
?annotation9li10 up:cellularComponent .
?annotation11 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the RbsD / FucU family. FucU mutarotase subfamily.' .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation .
?pfsb14 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf ?molecule17 .
?molecule17 rdfs:label 'substrate' .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor' .
?pfsb22 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfs26 up:annotation ?annotation27 .
?annotation27 faldo:begin ?pfsb28 ;
faldo:end ?pfse29 ;
up:ligand ?ligand30 ;
rdf:type up:Binding_Site_Annotation .
?pfsb28 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse29 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?ligand30 rdfs:subClassOf ?molecule31 .
?molecule31 rdfs:label 'substrate' .
?pfs34 up:annotation ?annotation35 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
up:ligand ?ligand38 ;
rdf:type up:Binding_Site_Annotation .
?pfsb36 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn41 ;
rdf:type faldo:ExactPosition .
?ligand38 rdfs:subClassOf ?molecule39 .
?molecule39 rdfs:label 'substrate' .
_:606875 a rdf:Statement ;
up:attribution _:606854 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:606876 a rdf:Statement ;
up:attribution _:606855 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:606877 a rdf:Statement ;
up:attribution _:606856 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:606878 a rdf:Statement ;
up:attribution _:606857 ;
rdf:subject ?gene3 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene3 .
_:606879 a rdf:Statement ;
up:attribution _:606858 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:606880 a rdf:Statement ;
up:attribution _:606859 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:606881 a rdf:Statement ;
up:attribution _:606860 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:606882 a rdf:Statement ;
up:attribution _:606861 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:606883 a rdf:Statement ;
up:attribution _:606862 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:606884 a rdf:Statement ;
up:attribution _:606863 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:606885 a rdf:Statement ;
up:attribution _:606864 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:119 .
_:606886 a rdf:Statement ;
up:attribution _:606865 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:606887 a rdf:Statement ;
up:attribution _:606866 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:294 .
_:606888 a rdf:Statement ;
up:attribution _:606867 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:413 .
_:606889 a rdf:Statement ;
up:attribution _:606868 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016853 .
_:606890 a rdf:Statement ;
up:attribution _:606869 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042354 .
_:606891 a rdf:Statement ;
up:attribution _:606870 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:606892 a rdf:Statement ;
up:source unirule:MF_01662 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:606893 a rdf:Statement ;
up:attribution _:606871 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:606894 a rdf:Statement ;
up:source unirule:MF_01662 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:606895 a rdf:Statement ;
up:attribution _:606872 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:606896 a rdf:Statement ;
up:source unirule:MF_01662 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:606897 a rdf:Statement ;
up:attribution _:606873 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:606898 a rdf:Statement ;
up:source unirule:MF_01662 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:606899 a rdf:Statement ;
up:attribution _:606874 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01662
#Rule MF_01662 Created by:? on:2008-06-25 Modified by:Edouard de Castro on:2023-01-26
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01662 .
?thisOrganism rdfs:subClassOf+ taxon:1224 .
BIND(URI(CONCAT(STR(?this), '#MF_01662a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a9')) AS ?annotation9) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a11')) AS ?annotation11) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch46 faldo:location ?templateMotifSequenceMatchRegionP0AEN847 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEN849 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AEN8MF_0166242 .
?templateMotifSequenceMatchRegionP0AEN847 faldo:begin ?templateMotifSequenceMatchBeginP0AEN848 .
?templateMotifSequenceMatchBeginP0AEN848 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEN843 ;
faldo:reference isoform:P0AEN8-1 .
?templateMotifSequenceProfileAlignmentOperationP0AEN849 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
?targetMotifMatch50 faldo:location ?targetMotifMatchRegionMatch51 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0166253 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AEN8MF_0166244 .
?targetMotifMatchRegionMatch51 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0166252 .
?targetMotifMatchRegionMatchBeginMF_0166252 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0166245 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0166253 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEN8MF_0166242, 1, (STRLEN(?templateMotifCigarP0AEN8MF_0166242) - STRLEN(REPLACE(?templateMotifCigarP0AEN8MF_0166242, CONCAT('^(?:-*[^-]){', STR(((129 - ?templateMotifSequenceMatchBeginPositionP0AEN843) + 1)), '}'), '')))), '[a-z]', '')) AS ?step154) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166244, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166244) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166244, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166244) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step154), '}'), '')))), '[^-]', ''))) AS ?step255) .
BIND(((?step255 + ?targetMotifMatchRegionMatchBeginPositionMF_0166245) - 1) AS ?thisPositionOn18) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEN8MF_0166242, 1, (STRLEN(?templateMotifCigarP0AEN8MF_0166242) - STRLEN(REPLACE(?templateMotifCigarP0AEN8MF_0166242, CONCAT('^(?:-*[^-]){', STR(((131 - ?templateMotifSequenceMatchBeginPositionP0AEN843) + 1)), '}'), '')))), '[a-z]', '')) AS ?step156) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166244, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166244) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166244, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166244) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step156), '}'), '')))), '[^-]', ''))) AS ?step257) .
BIND(((?step257 + ?targetMotifMatchRegionMatchBeginPositionMF_0166245) - 1) AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t58) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse15) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)) = 'YGN')) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch63 faldo:location ?templateMotifSequenceMatchRegionP0AEN864 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEN866 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AEN8MF_0166259 .
?templateMotifSequenceMatchRegionP0AEN864 faldo:begin ?templateMotifSequenceMatchBeginP0AEN865 .
?templateMotifSequenceMatchBeginP0AEN865 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEN860 ;
faldo:reference isoform:P0AEN8-1 .
?templateMotifSequenceProfileAlignmentOperationP0AEN866 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
?targetMotifMatch67 faldo:location ?targetMotifMatchRegionMatch68 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0166270 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AEN8MF_0166261 .
?targetMotifMatchRegionMatch68 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0166269 .
?targetMotifMatchRegionMatchBeginMF_0166269 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0166262 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0166270 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEN8MF_0166259, 1, (STRLEN(?templateMotifCigarP0AEN8MF_0166259) - STRLEN(REPLACE(?templateMotifCigarP0AEN8MF_0166259, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP0AEN860) + 1)), '}'), '')))), '[a-z]', '')) AS ?step171) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166261, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166261) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step171), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166261, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166261) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166261, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step171), '}'), '')))), '[^-]', ''))) AS ?step272) .
BIND(((?step272 + ?targetMotifMatchRegionMatchBeginPositionMF_0166262) - 1) AS ?thisPositionOn24) .
BIND(?thisPositionOn24 AS ?thisPositionOn25) .
BIND(?this AS ?pfs1t73) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch78 faldo:location ?templateMotifSequenceMatchRegionP0AEN879 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEN881 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AEN8MF_0166274 .
?templateMotifSequenceMatchRegionP0AEN879 faldo:begin ?templateMotifSequenceMatchBeginP0AEN880 .
?templateMotifSequenceMatchBeginP0AEN880 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEN875 ;
faldo:reference isoform:P0AEN8-1 .
?templateMotifSequenceProfileAlignmentOperationP0AEN881 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
?targetMotifMatch82 faldo:location ?targetMotifMatchRegionMatch83 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0166285 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AEN8MF_0166276 .
?targetMotifMatchRegionMatch83 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0166284 .
?targetMotifMatchRegionMatchBeginMF_0166284 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0166277 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0166285 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEN8MF_0166274, 1, (STRLEN(?templateMotifCigarP0AEN8MF_0166274) - STRLEN(REPLACE(?templateMotifCigarP0AEN8MF_0166274, CONCAT('^(?:-*[^-]){', STR(((30 - ?templateMotifSequenceMatchBeginPositionP0AEN875) + 1)), '}'), '')))), '[a-z]', '')) AS ?step186) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166276, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166276) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166276, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166276) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166276, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), '')))), '[^-]', ''))) AS ?step287) .
BIND(((?step287 + ?targetMotifMatchRegionMatchBeginPositionMF_0166277) - 1) AS ?thisPositionOn32) .
BIND(?thisPositionOn32 AS ?thisPositionOn33) .
BIND(?this AS ?pfs1t88) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse29) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a27')) AS ?annotation27) .
BIND(?this AS ?pfs26) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch93 faldo:location ?templateMotifSequenceMatchRegionP0AEN894 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AEN896 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AEN8MF_0166289 .
?templateMotifSequenceMatchRegionP0AEN894 faldo:begin ?templateMotifSequenceMatchBeginP0AEN895 .
?templateMotifSequenceMatchBeginP0AEN895 faldo:position ?templateMotifSequenceMatchBeginPositionP0AEN890 ;
faldo:reference isoform:P0AEN8-1 .
?templateMotifSequenceProfileAlignmentOperationP0AEN896 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
?targetMotifMatch97 faldo:location ?targetMotifMatchRegionMatch98 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01662100 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AEN8MF_0166291 .
?targetMotifMatchRegionMatch98 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0166299 .
?targetMotifMatchRegionMatchBeginMF_0166299 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0166292 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01662100 edam:has_input signature:MF_01662 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AEN8MF_0166289, 1, (STRLEN(?templateMotifCigarP0AEN8MF_0166289) - STRLEN(REPLACE(?templateMotifCigarP0AEN8MF_0166289, CONCAT('^(?:-*[^-]){', STR(((107 - ?templateMotifSequenceMatchBeginPositionP0AEN890) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166291, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166291) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166291, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AEN8MF_0166291, 1, (STRLEN(?targetMotifMatchCigarP0AEN8MF_0166291) - STRLEN(REPLACE(?targetMotifMatchCigarP0AEN8MF_0166291, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) .
BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0166292) - 1) AS ?thisPositionOn40) .
BIND(?thisPositionOn40 AS ?thisPositionOn41) .
BIND(?this AS ?pfs1t103) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse37) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_01662a35')) AS ?annotation35) .
BIND(?this AS ?pfs34) .
}
}
"xsd:string |
