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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-36 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-13 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-33 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-34 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-58 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-10 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-35 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-140 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-141 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-134 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-132 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-138 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-136 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-135 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-133 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-139 |
| http://purl.uniprot.org/unirules/MF_01815#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01815#construct-template-137 |
| http://purl.uniprot.org/unirules/MF_01815#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01815#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01815#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01815#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01815#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01815#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:636300 up:source unirule:MF_01815 . _:636301 up:source unirule:MF_01815 . _:636302 up:source unirule:MF_01815 . _:636303 up:source unirule:MF_01815 . _:636304 up:source unirule:MF_01815 . _:636305 up:source unirule:MF_01815 . _:636306 up:source unirule:MF_01815 . _:636307 up:source unirule:MF_01815 . _:636308 up:source unirule:MF_01815 . _:636309 up:source unirule:MF_01815 . _:636310 up:source unirule:MF_01815 . _:636311 up:source unirule:MF_01815 . _:636312 up:source unirule:MF_01815 . _:636313 up:source unirule:MF_01815 . _:636314 up:source unirule:MF_01815 . _:636315 up:source unirule:MF_01815 . _:636316 up:source unirule:MF_01815 . _:636317 up:source unirule:MF_01815 . _:636318 up:source unirule:MF_01815 . _:636319 up:source unirule:MF_01815 . _:636320 up:source unirule:MF_01815 . _:636321 up:source unirule:MF_01815 . _:636322 up:source unirule:MF_01815 . _:636323 up:source unirule:MF_01815 . _:636324 up:source unirule:MF_01815 . _:636325 up:source unirule:MF_01815 . _:636326 up:source unirule:MF_01815 . ?this up:annotation ?annotation0 , ?annotation1 , ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0006633 , GO:0033818 , keyword:12 , keyword:275 , keyword:276 , keyword:443 , keyword:444 , keyword:511 , keyword:808 . ?annotation0 a up:Function_Annotation ; rdfs:comment 'Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids.' . ?annotation1 a up:Pathway_Annotation ; rdfs:comment 'Lipid metabolism; fatty acid biosynthesis.' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation3 a up:Domain_Annotation ; rdfs:comment 'The last Arg residue of the ACP-binding site is essential for the weak association between ACP/AcpP and FabH.' . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the thiolase-like superfamily. FabH family.' . ?case5 up:classifiedWith GO:0009507 . ?case6 up:classifiedWith GO:0005737 , keyword:963 . ?case7 up:alternativeName ?name9 , ?name10 ; up:recommendedName ?name8 . ?name8 up:ecName '2.3.1.301' ; up:fullName 'Mycobacterial beta-ketoacyl-[acyl-carrier-protein] synthase III' ; up:shortName 'Beta-ketoacyl-ACP synthase III' , 'KAS III' ; rdf:type up:Structured_Name . ?name9 up:fullName '3-oxoacyl-[acyl-carrier-protein] synthase 3' ; rdf:type up:Structured_Name . ?name10 up:fullName '3-oxoacyl-[acyl-carrier-protein] synthase III' ; rdf:type up:Structured_Name . ?case11 up:alternativeName ?name13 , ?name14 ; up:recommendedName ?name12 . ?name12 up:ecName '2.3.1.180' ; up:fullName 'Beta-ketoacyl-[acyl-carrier-protein] synthase III' ; up:shortName 'Beta-ketoacyl-ACP synthase III' , 'KAS III' ; rdf:type up:Structured_Name . ?name13 up:fullName '3-oxoacyl-[acyl-carrier-protein] synthase 3' ; rdf:type up:Structured_Name . ?name14 up:fullName '3-oxoacyl-[acyl-carrier-protein] synthase III' ; rdf:type up:Structured_Name . ?pfs15 up:annotation ?annotation16 . ?annotation16 faldo:begin ?pfsb17 ; faldo:end ?pfse18 ; rdf:type up:Active_Site_Annotation . ?pfsb17 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfse18 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfs21 up:annotation ?annotation22 . ?annotation22 faldo:begin ?pfsb23 ; faldo:end ?pfse24 ; rdf:type up:Active_Site_Annotation . ?pfsb23 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?pfse24 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfs27 up:annotation ?annotation28 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; rdf:type up:Active_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfs33 up:annotation ?annotation34 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; rdf:type up:Region_Annotation ; rdfs:comment 'ACP-binding' . ?pfsb35 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . _:636327 a rdf:Statement ; up:attribution _:636300 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:636328 a rdf:Statement ; up:attribution _:636301 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:636329 a rdf:Statement ; up:attribution _:636302 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:636330 a rdf:Statement ; up:attribution _:636303 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:636331 a rdf:Statement ; up:attribution _:636304 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:636332 a rdf:Statement ; up:attribution _:636305 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:12 . _:636333 a rdf:Statement ; up:attribution _:636306 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:275 . _:636334 a rdf:Statement ; up:attribution _:636307 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:276 . _:636335 a rdf:Statement ; up:attribution _:636308 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:444 . _:636336 a rdf:Statement ; up:attribution _:636309 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:443 . _:636337 a rdf:Statement ; up:attribution _:636310 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:511 . _:636338 a rdf:Statement ; up:attribution _:636311 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:636339 a rdf:Statement ; up:attribution _:636312 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0033818 . _:636340 a rdf:Statement ; up:attribution _:636313 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006633 . _:636341 a rdf:Statement ; up:attribution _:636314 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0009507 . _:636342 a rdf:Statement ; up:attribution _:636315 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:636343 a rdf:Statement ; up:attribution _:636316 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005737 . _:636344 a rdf:Statement ; up:attribution _:636317 ; rdf:subject ?case7 ; rdf:predicate up:recommendedName ; rdf:object ?name8 . _:636345 a rdf:Statement ; up:attribution _:636318 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:636346 a rdf:Statement ; up:attribution _:636319 ; rdf:subject ?case7 ; rdf:predicate up:alternativeName ; rdf:object ?name10 . _:636347 a rdf:Statement ; up:attribution _:636320 ; rdf:subject ?case11 ; rdf:predicate up:recommendedName ; rdf:object ?name12 . _:636348 a rdf:Statement ; up:attribution _:636321 ; rdf:subject ?case11 ; rdf:predicate up:alternativeName ; rdf:object ?name13 . _:636349 a rdf:Statement ; up:attribution _:636322 ; rdf:subject ?case11 ; rdf:predicate up:alternativeName ; rdf:object ?name14 . _:636350 a rdf:Statement ; up:source unirule:MF_01815 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:636351 a rdf:Statement ; up:attribution _:636323 ; rdf:subject ?pfs15 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:636352 a rdf:Statement ; up:source unirule:MF_01815 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:636353 a rdf:Statement ; up:attribution _:636324 ; rdf:subject ?pfs21 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:636354 a rdf:Statement ; up:source unirule:MF_01815 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:636355 a rdf:Statement ; up:attribution _:636325 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:636356 a rdf:Statement ; up:source unirule:MF_01815 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:636357 a rdf:Statement ; up:attribution _:636326 ; rdf:subject ?pfs33 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01815 #Rule MF_01815 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-08-25 { ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01815 . ?thisOrganism rdfs:subClassOf+ taxon:2 . } UNION { ?this rdfs:seeAlso signature:MF_01815 . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } UNION { ?this up:encodedIn up:Cyanelle . } UNION { ?this up:encodedIn up:Apicoplast . } UNION { ?this up:encodedIn up:Organellar_chromatophore . } UNION { ?this up:encodedIn up:Non-photosynthetic_plastid . } } BIND(URI(CONCAT(STR(?this), '#MF_01815a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_01815a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01815a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01815a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01815a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch43 faldo:location ?templateMotifSequenceMatchRegionP0A6R044 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6R046 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6R0MF_0181539 . ?templateMotifSequenceMatchRegionP0A6R044 faldo:begin ?templateMotifSequenceMatchBeginP0A6R045 . ?templateMotifSequenceMatchBeginP0A6R045 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6R040 ; faldo:reference isoform:P0A6R0-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6R046 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . ?targetMotifMatch47 faldo:location ?targetMotifMatchRegionMatch48 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181550 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6R0MF_0181541 . ?targetMotifMatchRegionMatch48 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181549 . ?targetMotifMatchRegionMatchBeginMF_0181549 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181542 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181550 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R0MF_0181539, 1, (STRLEN(?templateMotifCigarP0A6R0MF_0181539) - STRLEN(REPLACE(?templateMotifCigarP0A6R0MF_0181539, CONCAT('^(?:-*[^-]){', STR(((112 - ?templateMotifSequenceMatchBeginPositionP0A6R040) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181541, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181541) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181541, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181541, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181541) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181541, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) . BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0181542) - 1) AS ?thisPositionOn19) . BIND(?thisPositionOn19 AS ?thisPositionOn20) . BIND(?this AS ?pfs1t53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb17) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse18) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'C')) . BIND(URI(CONCAT(STR(?this), '#MF_01815a16')) AS ?annotation16) . BIND(?this AS ?pfs15) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch58 faldo:location ?templateMotifSequenceMatchRegionP0A6R059 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6R061 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6R0MF_0181554 . ?templateMotifSequenceMatchRegionP0A6R059 faldo:begin ?templateMotifSequenceMatchBeginP0A6R060 . ?templateMotifSequenceMatchBeginP0A6R060 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6R055 ; faldo:reference isoform:P0A6R0-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6R061 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . ?targetMotifMatch62 faldo:location ?targetMotifMatchRegionMatch63 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181565 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6R0MF_0181556 . ?targetMotifMatchRegionMatch63 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181564 . ?targetMotifMatchRegionMatchBeginMF_0181564 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181557 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181565 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R0MF_0181554, 1, (STRLEN(?templateMotifCigarP0A6R0MF_0181554) - STRLEN(REPLACE(?templateMotifCigarP0A6R0MF_0181554, CONCAT('^(?:-*[^-]){', STR(((244 - ?templateMotifSequenceMatchBeginPositionP0A6R055) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181556, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181556) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181556, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181556, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181556) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181556, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) . BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0181557) - 1) AS ?thisPositionOn25) . BIND(?thisPositionOn25 AS ?thisPositionOn26) . BIND(?this AS ?pfs1t68) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb23) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse24) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01815a22')) AS ?annotation22) . BIND(?this AS ?pfs21) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch73 faldo:location ?templateMotifSequenceMatchRegionP0A6R074 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6R076 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6R0MF_0181569 . ?templateMotifSequenceMatchRegionP0A6R074 faldo:begin ?templateMotifSequenceMatchBeginP0A6R075 . ?templateMotifSequenceMatchBeginP0A6R075 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6R070 ; faldo:reference isoform:P0A6R0-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6R076 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . ?targetMotifMatch77 faldo:location ?targetMotifMatchRegionMatch78 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181580 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6R0MF_0181571 . ?targetMotifMatchRegionMatch78 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181579 . ?targetMotifMatchRegionMatchBeginMF_0181579 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181572 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181580 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R0MF_0181569, 1, (STRLEN(?templateMotifCigarP0A6R0MF_0181569) - STRLEN(REPLACE(?templateMotifCigarP0A6R0MF_0181569, CONCAT('^(?:-*[^-]){', STR(((274 - ?templateMotifSequenceMatchBeginPositionP0A6R070) + 1)), '}'), '')))), '[a-z]', '')) AS ?step181) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181571, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181571) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181571, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181571, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181571) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181571, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), '')))), '[^-]', ''))) AS ?step282) . BIND(((?step282 + ?targetMotifMatchRegionMatchBeginPositionMF_0181572) - 1) AS ?thisPositionOn31) . BIND(?thisPositionOn31 AS ?thisPositionOn32) . BIND(?this AS ?pfs1t83) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01815a28')) AS ?annotation28) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch88 faldo:location ?templateMotifSequenceMatchRegionP0A6R089 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6R091 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A6R0MF_0181584 . ?templateMotifSequenceMatchRegionP0A6R089 faldo:begin ?templateMotifSequenceMatchBeginP0A6R090 . ?templateMotifSequenceMatchBeginP0A6R090 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6R085 ; faldo:reference isoform:P0A6R0-1 . ?templateMotifSequenceProfileAlignmentOperationP0A6R091 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . ?targetMotifMatch92 faldo:location ?targetMotifMatchRegionMatch93 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181595 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A6R0MF_0181586 . ?targetMotifMatchRegionMatch93 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181594 . ?targetMotifMatchRegionMatchBeginMF_0181594 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181587 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181595 edam:has_input signature:MF_01815 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R0MF_0181584, 1, (STRLEN(?templateMotifCigarP0A6R0MF_0181584) - STRLEN(REPLACE(?templateMotifCigarP0A6R0MF_0181584, CONCAT('^(?:-*[^-]){', STR(((245 - ?templateMotifSequenceMatchBeginPositionP0A6R085) + 1)), '}'), '')))), '[a-z]', '')) AS ?step196) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181586, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181586) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181586, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181586, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181586) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181586, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), '')))), '[^-]', ''))) AS ?step297) . BIND(((?step297 + ?targetMotifMatchRegionMatchBeginPositionMF_0181587) - 1) AS ?thisPositionOn37) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6R0MF_0181584, 1, (STRLEN(?templateMotifCigarP0A6R0MF_0181584) - STRLEN(REPLACE(?templateMotifCigarP0A6R0MF_0181584, CONCAT('^(?:-*[^-]){', STR(((249 - ?templateMotifSequenceMatchBeginPositionP0A6R085) + 1)), '}'), '')))), '[a-z]', '')) AS ?step198) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181586, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181586) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181586, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6R0MF_0181586, 1, (STRLEN(?targetMotifMatchCigarP0A6R0MF_0181586) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6R0MF_0181586, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), '')))), '[^-]', ''))) AS ?step299) . BIND(((?step299 + ?targetMotifMatchRegionMatchBeginPositionMF_0181587) - 1) AS ?thisPositionOn38) . BIND(?this AS ?pfs1t100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse36) . FILTER (REGEX('[QS][AP]N[ARNDCQEGHILKMFPSTWYVBZJUOX]R', SUBSTR(?thisSequenceValue, ?thisPositionOn37, (?thisPositionOn38 - ?thisPositionOn37)))) . BIND(URI(CONCAT(STR(?this), '#MF_01815a34')) AS ?annotation34) . BIND(?this AS ?pfs33) . } OPTIONAL { ?this a up:Protein . { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . FILTER (! (EXISTS { { ?this up:encodedIn up:Plastid . } UNION { ?this up:encodedIn up:Chloroplast . } })) . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:1763 . BIND(?this AS ?case7) . BIND(URI(CONCAT(STR(?this), '#MF_01815a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_01815a9')) AS ?name9) . BIND(URI(CONCAT(STR(?this), '#MF_01815a10')) AS ?name10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:1763 . })) . BIND(?this AS ?case11) . BIND(URI(CONCAT(STR(?this), '#MF_01815a12')) AS ?name12) . BIND(URI(CONCAT(STR(?this), '#MF_01815a13')) AS ?name13) . BIND(URI(CONCAT(STR(?this), '#MF_01815a14')) AS ?name14) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01815 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01815#construct |