Results
Your Query
◀
◀
| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-98 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-74 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-50 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-119 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-91 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-92 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-93 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-94 |
| http://purl.uniprot.org/unirules/MF_01985#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01985#construct-template-70 |
| http://purl.uniprot.org/unirules/MF_01985#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01985#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01985#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01985#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01985#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01985#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:700453 up:source unirule:MF_01985 . _:700454 up:source unirule:MF_01985 . _:700455 up:source unirule:MF_01985 . _:700456 up:source unirule:MF_01985 . _:700457 up:source unirule:MF_01985 . _:700458 up:source unirule:MF_01985 . _:700459 up:source unirule:MF_01985 . _:700460 up:source unirule:MF_01985 . _:700461 up:source unirule:MF_01985 . _:700462 up:source unirule:MF_01985 . _:700463 up:source unirule:MF_01985 . _:700464 up:source unirule:MF_01985 . _:700465 up:source unirule:MF_01985 . _:700466 up:source unirule:MF_01985 . _:700467 up:source unirule:MF_01985 . _:700468 up:source unirule:MF_01985 . _:700469 up:source unirule:MF_01985 . _:700470 up:source unirule:MF_01985 . _:700471 up:source unirule:MF_01985 . _:700472 up:source unirule:MF_01985 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation3 , ?annotation4 ; up:classifiedWith GO:0016831 , keyword:210 , keyword:216 , keyword:285 , keyword:288 , keyword:456 , keyword:464 , keyword:479 , keyword:58 ; up:recommendedName ?name0 . ?name0 up:ecName '4.1.1.-' ; up:fullName 'Phenolic acid decarboxylase' ; up:shortName 'PAD' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives.' . ?annotation2 up:cofactor chebi:87746 ; rdf:type up:Cofactor_Annotation ; rdfs:comment 'Binds 1 prenylated FMN per subunit.' . ?annotation3 up:cofactor chebi:29035 ; rdf:type up:Cofactor_Annotation . ?annotation4 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the UbiD family. YclC subfamily.' . ?pfs5 up:annotation ?annotation6 . ?annotation6 faldo:begin ?pfsb7 ; faldo:end ?pfse8 ; up:ligand ?ligand9 ; rdf:type up:Binding_Site_Annotation . ?pfsb7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse8 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?ligand9 rdfs:subClassOf chebi:87746 . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; up:ligand ?ligand16 ; rdf:type up:Binding_Site_Annotation . ?pfsb14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?ligand16 rdfs:subClassOf chebi:87746 . ?pfs19 up:annotation ?annotation20 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor' . ?pfsb21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfs25 up:annotation ?annotation26 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf chebi:29035 . ?pfs32 up:annotation ?annotation33 . ?annotation33 faldo:begin ?pfsb34 ; faldo:end ?pfse35 ; up:ligand ?ligand36 ; rdf:type up:Binding_Site_Annotation . ?pfsb34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?ligand36 rdfs:subClassOf chebi:29035 . ?pfs39 up:annotation ?annotation40 . ?annotation40 faldo:begin ?pfsb41 ; faldo:end ?pfse42 ; up:ligand ?ligand43 ; rdf:type up:Binding_Site_Annotation . ?pfsb41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?ligand43 rdfs:subClassOf chebi:29035 . _:700473 a rdf:Statement ; up:attribution _:700453 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:700474 a rdf:Statement ; up:attribution _:700454 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:700475 a rdf:Statement ; up:attribution _:700455 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:700476 a rdf:Statement ; up:attribution _:700456 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:700477 a rdf:Statement ; up:attribution _:700457 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:700478 a rdf:Statement ; up:attribution _:700458 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:58 . _:700479 a rdf:Statement ; up:attribution _:700459 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:210 . _:700480 a rdf:Statement ; up:attribution _:700460 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:216 . _:700481 a rdf:Statement ; up:attribution _:700461 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:456 . _:700482 a rdf:Statement ; up:attribution _:700462 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:464 . _:700483 a rdf:Statement ; up:attribution _:700463 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:700484 a rdf:Statement ; up:attribution _:700464 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:285 . _:700485 a rdf:Statement ; up:attribution _:700465 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:288 . _:700486 a rdf:Statement ; up:attribution _:700466 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016831 . _:700487 a rdf:Statement ; up:source unirule:MF_01985 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:700488 a rdf:Statement ; up:attribution _:700467 ; rdf:subject ?pfs5 ; rdf:predicate up:annotation ; rdf:object ?annotation6 . _:700489 a rdf:Statement ; up:source unirule:MF_01985 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:700490 a rdf:Statement ; up:attribution _:700468 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:700491 a rdf:Statement ; up:source unirule:MF_01985 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:700492 a rdf:Statement ; up:attribution _:700469 ; rdf:subject ?pfs19 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:700493 a rdf:Statement ; up:source unirule:MF_01985 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:700494 a rdf:Statement ; up:attribution _:700470 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:700495 a rdf:Statement ; up:source unirule:MF_01985 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:700496 a rdf:Statement ; up:attribution _:700471 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:700497 a rdf:Statement ; up:source unirule:MF_01985 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:700498 a rdf:Statement ; up:attribution _:700472 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01985 #Rule MF_01985 Created by:? on:2015-09-01 Modified by:Elisabeth Coudert on:2024-09-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01985 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_01985a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_01985a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_01985a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_01985a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_01985a4')) AS ?annotation4) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch50 faldo:location ?templateMotifSequenceMatchRegionP9440551 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9440553 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP94405MF_0198546 . ?templateMotifSequenceMatchRegionP9440551 faldo:begin ?templateMotifSequenceMatchBeginP9440552 . ?templateMotifSequenceMatchBeginP9440552 faldo:position ?templateMotifSequenceMatchBeginPositionP9440547 ; faldo:reference isoform:P94405-1 . ?templateMotifSequenceProfileAlignmentOperationP9440553 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . ?targetMotifMatch54 faldo:location ?targetMotifMatchRegionMatch55 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0198557 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP94405MF_0198548 . ?targetMotifMatchRegionMatch55 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0198556 . ?targetMotifMatchRegionMatchBeginMF_0198556 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0198549 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0198557 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_0198546, 1, (STRLEN(?templateMotifCigarP94405MF_0198546) - STRLEN(REPLACE(?templateMotifCigarP94405MF_0198546, CONCAT('^(?:-*[^-]){', STR(((160 - ?templateMotifSequenceMatchBeginPositionP9440547) + 1)), '}'), '')))), '[a-z]', '')) AS ?step158) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_0198548, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198548) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198548, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_0198548, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198548) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198548, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step158), '}'), '')))), '[^-]', ''))) AS ?step259) . BIND(((?step259 + ?targetMotifMatchRegionMatchBeginPositionMF_0198549) - 1) AS ?thisPositionOn10) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_0198546, 1, (STRLEN(?templateMotifCigarP94405MF_0198546) - STRLEN(REPLACE(?templateMotifCigarP94405MF_0198546, CONCAT('^(?:-*[^-]){', STR(((165 - ?templateMotifSequenceMatchBeginPositionP9440547) + 1)), '}'), '')))), '[a-z]', '')) AS ?step160) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_0198548, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198548) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198548, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_0198548, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198548) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198548, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), '')))), '[^-]', ''))) AS ?step261) . BIND(((?step261 + ?targetMotifMatchRegionMatchBeginPositionMF_0198549) - 1) AS ?thisPositionOn11) . BIND(?this AS ?pfs1t62) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb7) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse8) . FILTER (REGEX('[SN]VG[ARNDCQEGHILKMFPSTWYVBZJUOX]YR', SUBSTR(?thisSequenceValue, ?thisPositionOn10, (?thisPositionOn11 - ?thisPositionOn10)))) . BIND(URI(CONCAT(STR(?this), '#MF_01985a6')) AS ?annotation6) . BIND(?this AS ?pfs5) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch67 faldo:location ?templateMotifSequenceMatchRegionP9440568 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9440570 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP94405MF_0198563 . ?templateMotifSequenceMatchRegionP9440568 faldo:begin ?templateMotifSequenceMatchBeginP9440569 . ?templateMotifSequenceMatchBeginP9440569 faldo:position ?templateMotifSequenceMatchBeginPositionP9440564 ; faldo:reference isoform:P94405-1 . ?templateMotifSequenceProfileAlignmentOperationP9440570 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . ?targetMotifMatch71 faldo:location ?targetMotifMatchRegionMatch72 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0198574 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP94405MF_0198565 . ?targetMotifMatchRegionMatch72 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0198573 . ?targetMotifMatchRegionMatchBeginMF_0198573 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0198566 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0198574 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_0198563, 1, (STRLEN(?templateMotifCigarP94405MF_0198563) - STRLEN(REPLACE(?templateMotifCigarP94405MF_0198563, CONCAT('^(?:-*[^-]){', STR(((181 - ?templateMotifSequenceMatchBeginPositionP9440564) + 1)), '}'), '')))), '[a-z]', '')) AS ?step175) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_0198565, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198565) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198565, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_0198565, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198565) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198565, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), '')))), '[^-]', ''))) AS ?step276) . BIND(((?step276 + ?targetMotifMatchRegionMatchBeginPositionMF_0198566) - 1) AS ?thisPositionOn17) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_0198563, 1, (STRLEN(?templateMotifCigarP94405MF_0198563) - STRLEN(REPLACE(?templateMotifCigarP94405MF_0198563, CONCAT('^(?:-*[^-]){', STR(((182 - ?templateMotifSequenceMatchBeginPositionP9440564) + 1)), '}'), '')))), '[a-z]', '')) AS ?step177) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_0198565, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198565) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198565, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_0198565, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198565) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198565, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), '')))), '[^-]', ''))) AS ?step278) . BIND(((?step278 + ?targetMotifMatchRegionMatchBeginPositionMF_0198566) - 1) AS ?thisPositionOn18) . BIND(?this AS ?pfs1t79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) . FILTER (REGEX('[QMF]H', SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)))) . BIND(URI(CONCAT(STR(?this), '#MF_01985a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch84 faldo:location ?templateMotifSequenceMatchRegionP9440585 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP9440587 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP94405MF_0198580 . ?templateMotifSequenceMatchRegionP9440585 faldo:begin ?templateMotifSequenceMatchBeginP9440586 . ?templateMotifSequenceMatchBeginP9440586 faldo:position ?templateMotifSequenceMatchBeginPositionP9440581 ; faldo:reference isoform:P94405-1 . ?templateMotifSequenceProfileAlignmentOperationP9440587 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . ?targetMotifMatch88 faldo:location ?targetMotifMatchRegionMatch89 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0198591 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP94405MF_0198582 . ?targetMotifMatchRegionMatch89 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0198590 . ?targetMotifMatchRegionMatchBeginMF_0198590 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0198583 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0198591 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_0198580, 1, (STRLEN(?templateMotifCigarP94405MF_0198580) - STRLEN(REPLACE(?templateMotifCigarP94405MF_0198580, CONCAT('^(?:-*[^-]){', STR(((273 - ?templateMotifSequenceMatchBeginPositionP9440581) + 1)), '}'), '')))), '[a-z]', '')) AS ?step192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_0198582, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198582) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198582, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_0198582, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198582) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198582, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), '')))), '[^-]', ''))) AS ?step293) . BIND(((?step293 + ?targetMotifMatchRegionMatchBeginPositionMF_0198583) - 1) AS ?thisPositionOn23) . BIND(?thisPositionOn23 AS ?thisPositionOn24) . BIND(?this AS ?pfs1t94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01985a20')) AS ?annotation20) . BIND(?this AS ?pfs19) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch99 faldo:location ?templateMotifSequenceMatchRegionP94405100 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP94405102 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP94405MF_0198595 . ?templateMotifSequenceMatchRegionP94405100 faldo:begin ?templateMotifSequenceMatchBeginP94405101 . ?templateMotifSequenceMatchBeginP94405101 faldo:position ?templateMotifSequenceMatchBeginPositionP9440596 ; faldo:reference isoform:P94405-1 . ?templateMotifSequenceProfileAlignmentOperationP94405102 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . ?targetMotifMatch103 faldo:location ?targetMotifMatchRegionMatch104 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01985106 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP94405MF_0198597 . ?targetMotifMatchRegionMatch104 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01985105 . ?targetMotifMatchRegionMatchBeginMF_01985105 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0198598 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01985106 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_0198595, 1, (STRLEN(?templateMotifCigarP94405MF_0198595) - STRLEN(REPLACE(?templateMotifCigarP94405MF_0198595, CONCAT('^(?:-*[^-]){', STR(((160 - ?templateMotifSequenceMatchBeginPositionP9440596) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_0198597, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198597) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198597, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_0198597, 1, (STRLEN(?targetMotifMatchCigarP94405MF_0198597) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_0198597, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0198598) - 1) AS ?thisPositionOn30) . BIND(?thisPositionOn30 AS ?thisPositionOn31) . BIND(?this AS ?pfs1t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'N')) . BIND(URI(CONCAT(STR(?this), '#MF_01985a26')) AS ?annotation26) . BIND(?this AS ?pfs25) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionP94405115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP94405117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP94405MF_01985110 . ?templateMotifSequenceMatchRegionP94405115 faldo:begin ?templateMotifSequenceMatchBeginP94405116 . ?templateMotifSequenceMatchBeginP94405116 faldo:position ?templateMotifSequenceMatchBeginPositionP94405111 ; faldo:reference isoform:P94405-1 . ?templateMotifSequenceProfileAlignmentOperationP94405117 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01985121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP94405MF_01985112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01985120 . ?targetMotifMatchRegionMatchBeginMF_01985120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01985113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01985121 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_01985110, 1, (STRLEN(?templateMotifCigarP94405MF_01985110) - STRLEN(REPLACE(?templateMotifCigarP94405MF_01985110, CONCAT('^(?:-*[^-]){', STR(((182 - ?templateMotifSequenceMatchBeginPositionP94405111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_01985112, 1, (STRLEN(?targetMotifMatchCigarP94405MF_01985112) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_01985112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_01985112, 1, (STRLEN(?targetMotifMatchCigarP94405MF_01985112) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_01985112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_01985113) - 1) AS ?thisPositionOn37) . BIND(?thisPositionOn37 AS ?thisPositionOn38) . BIND(?this AS ?pfs1t124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_01985a33')) AS ?annotation33) . BIND(?this AS ?pfs32) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionP94405130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP94405132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP94405MF_01985125 . ?templateMotifSequenceMatchRegionP94405130 faldo:begin ?templateMotifSequenceMatchBeginP94405131 . ?templateMotifSequenceMatchBeginP94405131 faldo:position ?templateMotifSequenceMatchBeginPositionP94405126 ; faldo:reference isoform:P94405-1 . ?templateMotifSequenceProfileAlignmentOperationP94405132 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01985136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP94405MF_01985127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01985135 . ?targetMotifMatchRegionMatchBeginMF_01985135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01985128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01985136 edam:has_input signature:MF_01985 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP94405MF_01985125, 1, (STRLEN(?templateMotifCigarP94405MF_01985125) - STRLEN(REPLACE(?templateMotifCigarP94405MF_01985125, CONCAT('^(?:-*[^-]){', STR(((224 - ?templateMotifSequenceMatchBeginPositionP94405126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP94405MF_01985127, 1, (STRLEN(?targetMotifMatchCigarP94405MF_01985127) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_01985127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP94405MF_01985127, 1, (STRLEN(?targetMotifMatchCigarP94405MF_01985127) - STRLEN(REPLACE(?targetMotifMatchCigarP94405MF_01985127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_01985128) - 1) AS ?thisPositionOn44) . BIND(?thisPositionOn44 AS ?thisPositionOn45) . BIND(?this AS ?pfs1t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_01985a40')) AS ?annotation40) . BIND(?this AS ?pfs39) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01985 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01985#construct |