| http://purl.uniprot.org/unirules/MF_03035#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:796900 up:source unirule:MF_03035 .
_:796901 up:source unirule:MF_03035 .
_:796902 up:source unirule:MF_03035 .
_:796903 up:source unirule:MF_03035 .
_:796904 up:source unirule:MF_03035 .
_:796905 up:source unirule:MF_03035 .
_:796906 up:source unirule:MF_03035 .
_:796907 up:source unirule:MF_03035 .
_:796908 up:source unirule:MF_03035 .
_:796909 up:source unirule:MF_03035 .
_:796910 up:source unirule:MF_03035 .
_:796911 up:source unirule:MF_03035 .
_:796912 up:source unirule:MF_03035 .
_:796913 up:source unirule:MF_03035 .
_:796914 up:source unirule:MF_03035 .
_:796915 up:source unirule:MF_03035 .
_:796916 up:source unirule:MF_03035 .
_:796917 up:source unirule:MF_03035 .
_:796918 up:source unirule:MF_03035 .
_:796919 up:source unirule:MF_03035 .
_:796920 up:source unirule:MF_03035 .
_:796921 up:source unirule:MF_03035 .
_:796922 up:source unirule:MF_03035 .
_:796923 up:source unirule:MF_03035 .
_:796924 up:source unirule:MF_03035 .
_:796925 up:source unirule:MF_03035 .
_:796926 up:source unirule:MF_03035 .
_:796927 up:source unirule:MF_03035 .
?this up:annotation ?annotation0 ,
?annotation2 ;
up:classifiedWith GO:0005524 ,
GO:0005634 ,
GO:0031124 ,
keyword:507 ,
keyword:539 .
?annotation0 a up:Subcellular_Location_Annotation .
?annotation0li1 up:cellularComponent .
?annotation2 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the Clp1 family. Clp1 subfamily.' .
?case3 up:classifiedWith keyword:547 ,
keyword:67 .
?case5 up:classifiedWith keyword:460 ,
keyword:464 ,
keyword:533 .
?case6 up:alternativeName ?name8 ,
?name9 ,
?name10 ;
up:classifiedWith GO:0000214 ,
GO:0006388 ,
GO:0046404 ,
GO:0051736 ,
GO:0070922 ,
keyword:418 ,
keyword:808 ,
keyword:819 ;
up:recommendedName ?name7 .
?name7 up:ecName '2.7.1.78' ;
up:fullName "Polyribonucleotide 5'-hydroxyl-kinase Clp1" ;
rdf:type up:Structured_Name .
?name8 up:fullName 'Polyadenylation factor Clp1' ;
rdf:type up:Structured_Name .
?name9 up:fullName 'Polynucleotide kinase Clp1' ;
rdf:type up:Structured_Name .
?name10 up:fullName 'Pre-mRNA cleavage complex II protein Clp1' ;
rdf:type up:Structured_Name .
?case13 up:classifiedWith GO:0005849 .
?pfs18 up:annotation ?annotation19 .
?annotation19 faldo:begin ?pfsb20 ;
faldo:end ?pfse21 ;
up:ligand ?ligand22 ;
rdf:type up:Binding_Site_Annotation .
?pfsb20 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?pfse21 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?ligand22 rdfs:subClassOf chebi:30616 .
?pfs25 up:annotation ?annotation26 .
?annotation26 faldo:begin ?pfsb27 ;
faldo:end ?pfse28 ;
up:ligand ?ligand29 ;
rdf:type up:Binding_Site_Annotation .
?pfsb27 faldo:position ?thisPositionOn30 ;
rdf:type faldo:ExactPosition .
?pfse28 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?ligand29 rdfs:subClassOf chebi:30616 .
?pfs32 up:annotation ?annotation33 .
?annotation33 faldo:begin ?pfsb34 ;
faldo:end ?pfse35 ;
up:ligand ?ligand36 ;
rdf:type up:Binding_Site_Annotation .
?pfsb34 faldo:position ?thisPositionOn37 ;
rdf:type faldo:ExactPosition .
?pfse35 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?ligand36 rdfs:subClassOf chebi:30616 .
_:796928 a rdf:Statement ;
up:attribution _:796900 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation0 .
_:796929 a rdf:Statement ;
up:attribution _:796901 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:796930 a rdf:Statement ;
up:attribution _:796902 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:507 .
_:796931 a rdf:Statement ;
up:attribution _:796903 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:539 .
_:796932 a rdf:Statement ;
up:attribution _:796904 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005524 .
_:796933 a rdf:Statement ;
up:attribution _:796905 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0031124 .
_:796934 a rdf:Statement ;
up:attribution _:796906 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005634 .
_:796935 a rdf:Statement ;
up:attribution _:796907 ;
rdf:subject ?case3 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:796936 a rdf:Statement ;
up:attribution _:796908 ;
rdf:subject ?case3 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:796937 a rdf:Statement ;
up:attribution _:796909 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:460 .
_:796938 a rdf:Statement ;
up:attribution _:796910 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:464 .
_:796939 a rdf:Statement ;
up:attribution _:796911 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:533 .
_:796940 a rdf:Statement ;
up:attribution _:796912 ;
rdf:subject ?case6 ;
rdf:predicate up:recommendedName ;
rdf:object ?name7 .
_:796941 a rdf:Statement ;
up:attribution _:796913 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name8 .
_:796942 a rdf:Statement ;
up:attribution _:796914 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name9 .
_:796943 a rdf:Statement ;
up:attribution _:796915 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name10 .
_:796944 a rdf:Statement ;
up:attribution _:796916 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:418 .
_:796945 a rdf:Statement ;
up:attribution _:796917 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:796946 a rdf:Statement ;
up:attribution _:796918 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:819 .
_:796947 a rdf:Statement ;
up:attribution _:796919 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0046404 .
_:796948 a rdf:Statement ;
up:attribution _:796920 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051736 .
_:796949 a rdf:Statement ;
up:attribution _:796921 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006388 .
_:796950 a rdf:Statement ;
up:attribution _:796922 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0070922 .
_:796951 a rdf:Statement ;
up:attribution _:796923 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0000214 .
_:796952 a rdf:Statement ;
up:attribution _:796924 ;
rdf:subject ?case13 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005849 .
_:796953 a rdf:Statement ;
up:source unirule:MF_03035 ;
rdf:subject ?pfs18 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:796954 a rdf:Statement ;
up:attribution _:796925 ;
rdf:subject ?pfs18 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:796955 a rdf:Statement ;
up:source unirule:MF_03035 ;
rdf:subject ?pfs25 ;
rdf:predicate up:annotation ;
rdf:object ?annotation26 .
_:796956 a rdf:Statement ;
up:attribution _:796926 ;
rdf:subject ?pfs25 ;
rdf:predicate up:annotation ;
rdf:object ?annotation26 .
_:796957 a rdf:Statement ;
up:source unirule:MF_03035 ;
rdf:subject ?pfs32 ;
rdf:predicate up:annotation ;
rdf:object ?annotation33 .
_:796958 a rdf:Statement ;
up:attribution _:796927 ;
rdf:subject ?pfs32 ;
rdf:predicate up:annotation ;
rdf:object ?annotation33 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03035
#Rule MF_03035 Created by:? on:2009-04-21 Modified by:Elisabeth Coudert on:2024-01-30
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03035 .
?thisOrganism rdfs:subClassOf+ taxon:2759 .
BIND(URI(CONCAT(STR(?this), '#MF_03035a0')) AS ?annotation0) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a2')) AS ?annotation2) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch43 faldo:location ?templateMotifSequenceMatchRegionQ0868544 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ0868546 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ08685MF_0303539 .
?templateMotifSequenceMatchRegionQ0868544 faldo:begin ?templateMotifSequenceMatchBeginQ0868545 .
?templateMotifSequenceMatchBeginQ0868545 faldo:position ?templateMotifSequenceMatchBeginPositionQ0868540 ;
faldo:reference isoform:Q08685-1 .
?templateMotifSequenceProfileAlignmentOperationQ0868546 edam:has_input signature:MF_03035 ;
rdf:type edam:operation_0300 .
?targetMotifMatch47 faldo:location ?targetMotifMatchRegionMatch48 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303550 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ08685MF_0303541 .
?targetMotifMatchRegionMatch48 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303549 .
?targetMotifMatchRegionMatchBeginMF_0303549 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303542 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0303550 edam:has_input signature:MF_03035 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagatp) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ08685MF_0303539, 1, (STRLEN(?templateMotifCigarQ08685MF_0303539) - STRLEN(REPLACE(?templateMotifCigarQ08685MF_0303539, CONCAT('^(?:-*[^-]){', STR(((133 - ?templateMotifSequenceMatchBeginPositionQ0868540) + 1)), '}'), '')))), '[a-z]', '')) AS ?step151) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ08685MF_0303541, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303541) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303541, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ08685MF_0303541, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303541) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303541, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step151), '}'), '')))), '[^-]', ''))) AS ?step252) .
BIND(((?step252 + ?targetMotifMatchRegionMatchBeginPositionMF_0303542) - 1) AS ?thisPositionOn23) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ08685MF_0303539, 1, (STRLEN(?templateMotifCigarQ08685MF_0303539) - STRLEN(REPLACE(?templateMotifCigarQ08685MF_0303539, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionQ0868540) + 1)), '}'), '')))), '[a-z]', '')) AS ?step153) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ08685MF_0303541, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303541) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303541, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ08685MF_0303541, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303541) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303541, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), '')))), '[^-]', ''))) AS ?step254) .
BIND(((?step254 + ?targetMotifMatchRegionMatchBeginPositionMF_0303542) - 1) AS ?thisPositionOn24) .
BIND(?this AS ?pfs1t55) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) .
FILTER (REGEX('[ARNDCQEGHILKMFPSTWYVBZJUOX][ARNDCQEGHILKMFPSTWYVBZJUOX]G[KR][ST][STA]', SUBSTR(?thisSequenceValue, ?thisPositionOn23, (?thisPositionOn24 - ?thisPositionOn23)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a19')) AS ?annotation19) .
BIND(?this AS ?pfs18) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch60 faldo:location ?templateMotifSequenceMatchRegionQ0868561 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ0868563 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ08685MF_0303556 .
?templateMotifSequenceMatchRegionQ0868561 faldo:begin ?templateMotifSequenceMatchBeginQ0868562 .
?templateMotifSequenceMatchBeginQ0868562 faldo:position ?templateMotifSequenceMatchBeginPositionQ0868557 ;
faldo:reference isoform:Q08685-1 .
?templateMotifSequenceProfileAlignmentOperationQ0868563 edam:has_input signature:MF_03035 ;
rdf:type edam:operation_0300 .
?targetMotifMatch64 faldo:location ?targetMotifMatchRegionMatch65 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303567 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ08685MF_0303558 .
?targetMotifMatchRegionMatch65 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303566 .
?targetMotifMatchRegionMatchBeginMF_0303566 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303559 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0303567 edam:has_input signature:MF_03035 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ08685MF_0303556, 1, (STRLEN(?templateMotifCigarQ08685MF_0303556) - STRLEN(REPLACE(?templateMotifCigarQ08685MF_0303556, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionQ0868557) + 1)), '}'), '')))), '[a-z]', '')) AS ?step168) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ08685MF_0303558, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303558) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303558, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step168), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ08685MF_0303558, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303558) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303558, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step168), '}'), '')))), '[^-]', ''))) AS ?step269) .
BIND(((?step269 + ?targetMotifMatchRegionMatchBeginPositionMF_0303559) - 1) AS ?thisPositionOn30) .
BIND(?thisPositionOn30 AS ?thisPositionOn31) .
BIND(?this AS ?pfs2t70) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) .
FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a26')) AS ?annotation26) .
BIND(?this AS ?pfs25) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch75 faldo:location ?templateMotifSequenceMatchRegionQ0868576 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ0868578 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ08685MF_0303571 .
?templateMotifSequenceMatchRegionQ0868576 faldo:begin ?templateMotifSequenceMatchBeginQ0868577 .
?templateMotifSequenceMatchBeginQ0868577 faldo:position ?templateMotifSequenceMatchBeginPositionQ0868572 ;
faldo:reference isoform:Q08685-1 .
?templateMotifSequenceProfileAlignmentOperationQ0868578 edam:has_input signature:MF_03035 ;
rdf:type edam:operation_0300 .
?targetMotifMatch79 faldo:location ?targetMotifMatchRegionMatch80 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0303582 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ08685MF_0303573 .
?targetMotifMatchRegionMatch80 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0303581 .
?targetMotifMatchRegionMatchBeginMF_0303581 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0303574 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0303582 edam:has_input signature:MF_03035 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ08685MF_0303571, 1, (STRLEN(?templateMotifCigarQ08685MF_0303571) - STRLEN(REPLACE(?templateMotifCigarQ08685MF_0303571, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionQ0868572) + 1)), '}'), '')))), '[a-z]', '')) AS ?step183) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ08685MF_0303573, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303573) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ08685MF_0303573, 1, (STRLEN(?targetMotifMatchCigarQ08685MF_0303573) - STRLEN(REPLACE(?targetMotifMatchCigarQ08685MF_0303573, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), '')))), '[^-]', ''))) AS ?step284) .
BIND(((?step284 + ?targetMotifMatchRegionMatchBeginPositionMF_0303574) - 1) AS ?thisPositionOn37) .
BIND(?thisPositionOn37 AS ?thisPositionOn38) .
BIND(?this AS ?pfs2t85) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) .
FILTER (REGEX('[KR]', SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a33')) AS ?annotation33) .
BIND(?this AS ?pfs32) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag86) .
}
BIND(IF(BOUND(?tagatp), ?caseWithTag86, ?UNBOUND_VARIABLE) AS ?case3) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:4751 .
BIND(?this AS ?case4) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:40674 .
BIND(?this AS ?case5) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(?this AS ?case6) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a7')) AS ?name7) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a8')) AS ?name8) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a9')) AS ?name9) .
BIND(URI(CONCAT(STR(?this), '#MF_03035a10')) AS ?name10) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:4930 .
BIND(?this AS ?case11) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:6237 .
BIND(?this AS ?case12) .
}
OPTIONAL {
?this a up:Protein .
VALUES ?supertaxon87 {taxon:7742 taxon:4751}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon87 .
BIND(?this AS ?case13) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:4751 .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:4930 .
})) .
BIND(?this AS ?case14) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:40674 .
})) .
BIND(?this AS ?case15) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
VALUES ?supertaxon88 {taxon:4930 taxon:7742}
?thisOrganism rdfs:subClassOf+ ?supertaxon88 .
})) .
BIND(?this AS ?case16) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
VALUES ?supertaxon89 {taxon:6237 taxon:4751 taxon:7742}
?thisOrganism rdfs:subClassOf+ ?supertaxon89 .
})) .
BIND(?this AS ?case17) .
}
}
"xsd:string |
