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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-96 |
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-71 |
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-95 |
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-70 |
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-94 |
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-93 |
| http://purl.uniprot.org/unirules/MF_03056#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03056#construct-template-92 |
| http://purl.uniprot.org/unirules/MF_03056#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03056#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03056#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03056#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03056#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03056#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:806083 up:source unirule:MF_03056 . _:806084 up:source unirule:MF_03056 . _:806085 up:source unirule:MF_03056 . _:806086 up:source unirule:MF_03056 . _:806087 up:source unirule:MF_03056 . _:806088 up:source unirule:MF_03056 . _:806089 up:source unirule:MF_03056 . _:806090 up:source unirule:MF_03056 . _:806091 up:source unirule:MF_03056 . _:806092 up:source unirule:MF_03056 . _:806093 up:source unirule:MF_03056 . _:806094 up:source unirule:MF_03056 . _:806095 up:source unirule:MF_03056 . _:806096 up:source unirule:MF_03056 . _:806097 up:source unirule:MF_03056 . _:806098 up:source unirule:MF_03056 . _:806099 up:source unirule:MF_03056 . _:806100 up:source unirule:MF_03056 . _:806101 up:source unirule:MF_03056 . _:806102 up:source unirule:MF_03056 . _:806103 up:source unirule:MF_03056 . ?this up:annotation ?annotation0 , ?annotation1 ; up:classifiedWith GO:0005634 , GO:0106004 , keyword:539 , keyword:677 , keyword:819 , keyword:853 . ?annotation0 a up:Pathway_Annotation ; rdfs:comment 'tRNA modification; N(7)-methylguanine-tRNA biosynthesis.' . ?annotation1 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the WD repeat TRM82 family.' . ?case5 up:classifiedWith GO:0007283 , GO:0048477 , keyword:217 , keyword:221 , keyword:744 , keyword:896 . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 1' . ?pfsb13 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfs17 up:annotation ?annotation18 . ?annotation18 faldo:begin ?pfsb19 ; faldo:end ?pfse20 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 2' . ?pfsb19 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfs23 up:annotation ?annotation24 . ?annotation24 faldo:begin ?pfsb25 ; faldo:end ?pfse26 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 3' . ?pfsb25 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfs29 up:annotation ?annotation30 . ?annotation30 faldo:begin ?pfsb31 ; faldo:end ?pfse32 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 4' . ?pfsb31 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 5' . ?pfsb37 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfs41 up:annotation ?annotation42 . ?annotation42 faldo:begin ?pfsb43 ; faldo:end ?pfse44 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 6' . ?pfsb43 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse44 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?pfs47 up:annotation ?annotation48 . ?annotation48 faldo:begin ?pfsb49 ; faldo:end ?pfse50 ; rdf:type up:Repeat_Annotation ; rdfs:comment 'WD 7' . ?pfsb49 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse50 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . _:806104 a rdf:Statement ; up:attribution _:806083 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:806105 a rdf:Statement ; up:attribution _:806084 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:806106 a rdf:Statement ; up:attribution _:806085 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:539 . _:806107 a rdf:Statement ; up:attribution _:806086 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:677 . _:806108 a rdf:Statement ; up:attribution _:806087 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:806109 a rdf:Statement ; up:attribution _:806088 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:853 . _:806110 a rdf:Statement ; up:attribution _:806089 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005634 . _:806111 a rdf:Statement ; up:attribution _:806090 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0106004 . _:806112 a rdf:Statement ; up:attribution _:806091 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:217 . _:806113 a rdf:Statement ; up:attribution _:806092 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:221 . _:806114 a rdf:Statement ; up:attribution _:806093 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:896 . _:806115 a rdf:Statement ; up:attribution _:806094 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object keyword:744 . _:806116 a rdf:Statement ; up:attribution _:806095 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0007283 . _:806117 a rdf:Statement ; up:attribution _:806096 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0048477 . _:806118 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:806119 a rdf:Statement ; up:attribution _:806097 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:806120 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:806121 a rdf:Statement ; up:attribution _:806098 ; rdf:subject ?pfs17 ; rdf:predicate up:annotation ; rdf:object ?annotation18 . _:806122 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:806123 a rdf:Statement ; up:attribution _:806099 ; rdf:subject ?pfs23 ; rdf:predicate up:annotation ; rdf:object ?annotation24 . _:806124 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:806125 a rdf:Statement ; up:attribution _:806100 ; rdf:subject ?pfs29 ; rdf:predicate up:annotation ; rdf:object ?annotation30 . _:806126 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:806127 a rdf:Statement ; up:attribution _:806101 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:806128 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:806129 a rdf:Statement ; up:attribution _:806102 ; rdf:subject ?pfs41 ; rdf:predicate up:annotation ; rdf:object ?annotation42 . _:806130 a rdf:Statement ; up:source unirule:MF_03056 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . _:806131 a rdf:Statement ; up:attribution _:806103 ; rdf:subject ?pfs47 ; rdf:predicate up:annotation ; rdf:object ?annotation48 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03056 #Rule MF_03056 Created by:? on:2013-08-22 Modified by:ipedruzz on:2024-05-23 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03056 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03056a0')) AS ?annotation0) . BIND(URI(CONCAT(STR(?this), '#MF_03056a1')) AS ?annotation1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch57 faldo:location ?templateMotifSequenceMatchRegionQ0377458 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ0377460 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_0305653 . ?templateMotifSequenceMatchRegionQ0377458 faldo:begin ?templateMotifSequenceMatchBeginQ0377459 . ?templateMotifSequenceMatchBeginQ0377459 faldo:position ?templateMotifSequenceMatchBeginPositionQ0377454 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ0377460 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch61 faldo:location ?targetMotifMatchRegionMatch62 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0305664 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_0305655 . ?targetMotifMatchRegionMatch62 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0305663 . ?targetMotifMatchRegionMatchBeginMF_0305663 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0305656 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0305664 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_0305653, 1, (STRLEN(?templateMotifCigarQ03774MF_0305653) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_0305653, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionQ0377454) + 1)), '}'), '')))), '[a-z]', '')) AS ?step165) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_0305655, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305655) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305655, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_0305655, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305655) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305655, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step165), '}'), '')))), '[^-]', ''))) AS ?step266) . BIND(((?step266 + ?targetMotifMatchRegionMatchBeginPositionMF_0305656) - 1) AS ?thisPositionOn15) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_0305653, 1, (STRLEN(?templateMotifCigarQ03774MF_0305653) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_0305653, CONCAT('^(?:-*[^-]){', STR(((47 - ?templateMotifSequenceMatchBeginPositionQ0377454) + 1)), '}'), '')))), '[a-z]', '')) AS ?step167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_0305655, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305655) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305655, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_0305655, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305655) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305655, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step167), '}'), '')))), '[^-]', ''))) AS ?step268) . BIND(((?step268 + ?targetMotifMatchRegionMatchBeginPositionMF_0305656) - 1) AS ?thisPositionOn16) . BIND(?this AS ?pfs1t69) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse14) . FILTER ((BOUND(?thisPositionOn15) && BOUND(?thisPositionOn16))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch74 faldo:location ?templateMotifSequenceMatchRegionQ0377475 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ0377477 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_0305670 . ?templateMotifSequenceMatchRegionQ0377475 faldo:begin ?templateMotifSequenceMatchBeginQ0377476 . ?templateMotifSequenceMatchBeginQ0377476 faldo:position ?templateMotifSequenceMatchBeginPositionQ0377471 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ0377477 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch78 faldo:location ?targetMotifMatchRegionMatch79 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0305681 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_0305672 . ?targetMotifMatchRegionMatch79 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0305680 . ?targetMotifMatchRegionMatchBeginMF_0305680 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0305673 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0305681 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_0305670, 1, (STRLEN(?templateMotifCigarQ03774MF_0305670) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_0305670, CONCAT('^(?:-*[^-]){', STR(((48 - ?templateMotifSequenceMatchBeginPositionQ0377471) + 1)), '}'), '')))), '[a-z]', '')) AS ?step182) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_0305672, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305672) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305672, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_0305672, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305672) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305672, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step182), '}'), '')))), '[^-]', ''))) AS ?step283) . BIND(((?step283 + ?targetMotifMatchRegionMatchBeginPositionMF_0305673) - 1) AS ?thisPositionOn21) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_0305670, 1, (STRLEN(?templateMotifCigarQ03774MF_0305670) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_0305670, CONCAT('^(?:-*[^-]){', STR(((99 - ?templateMotifSequenceMatchBeginPositionQ0377471) + 1)), '}'), '')))), '[a-z]', '')) AS ?step184) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_0305672, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305672) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305672, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_0305672, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305672) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305672, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step184), '}'), '')))), '[^-]', ''))) AS ?step285) . BIND(((?step285 + ?targetMotifMatchRegionMatchBeginPositionMF_0305673) - 1) AS ?thisPositionOn22) . BIND(?this AS ?pfs1t86) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb19) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse20) . FILTER ((BOUND(?thisPositionOn21) && BOUND(?thisPositionOn22))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a18')) AS ?annotation18) . BIND(?this AS ?pfs17) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch91 faldo:location ?templateMotifSequenceMatchRegionQ0377492 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ0377494 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_0305687 . ?templateMotifSequenceMatchRegionQ0377492 faldo:begin ?templateMotifSequenceMatchBeginQ0377493 . ?templateMotifSequenceMatchBeginQ0377493 faldo:position ?templateMotifSequenceMatchBeginPositionQ0377488 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ0377494 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch95 faldo:location ?targetMotifMatchRegionMatch96 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0305698 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_0305689 . ?targetMotifMatchRegionMatch96 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0305697 . ?targetMotifMatchRegionMatchBeginMF_0305697 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0305690 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0305698 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_0305687, 1, (STRLEN(?templateMotifCigarQ03774MF_0305687) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_0305687, CONCAT('^(?:-*[^-]){', STR(((100 - ?templateMotifSequenceMatchBeginPositionQ0377488) + 1)), '}'), '')))), '[a-z]', '')) AS ?step199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_0305689, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305689) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305689, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_0305689, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305689) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305689, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), '')))), '[^-]', ''))) AS ?step2100) . BIND(((?step2100 + ?targetMotifMatchRegionMatchBeginPositionMF_0305690) - 1) AS ?thisPositionOn27) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_0305687, 1, (STRLEN(?templateMotifCigarQ03774MF_0305687) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_0305687, CONCAT('^(?:-*[^-]){', STR(((147 - ?templateMotifSequenceMatchBeginPositionQ0377488) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_0305689, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305689) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305689, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_0305689, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_0305689) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_0305689, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) . BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0305690) - 1) AS ?thisPositionOn28) . BIND(?this AS ?pfs1t103) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb25) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse26) . FILTER ((BOUND(?thisPositionOn27) && BOUND(?thisPositionOn28))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a24')) AS ?annotation24) . BIND(?this AS ?pfs23) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch108 faldo:location ?templateMotifSequenceMatchRegionQ03774109 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ03774111 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_03056104 . ?templateMotifSequenceMatchRegionQ03774109 faldo:begin ?templateMotifSequenceMatchBeginQ03774110 . ?templateMotifSequenceMatchBeginQ03774110 faldo:position ?templateMotifSequenceMatchBeginPositionQ03774105 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ03774111 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch112 faldo:location ?targetMotifMatchRegionMatch113 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03056115 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_03056106 . ?targetMotifMatchRegionMatch113 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03056114 . ?targetMotifMatchRegionMatchBeginMF_03056114 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03056107 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03056115 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056104, 1, (STRLEN(?templateMotifCigarQ03774MF_03056104) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056104, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionQ03774105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056106, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056106) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056106, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056106) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) . BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_03056107) - 1) AS ?thisPositionOn33) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056104, 1, (STRLEN(?templateMotifCigarQ03774MF_03056104) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056104, CONCAT('^(?:-*[^-]){', STR(((192 - ?templateMotifSequenceMatchBeginPositionQ03774105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1118) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056106, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056106) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056106, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056106) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), '')))), '[^-]', ''))) AS ?step2119) . BIND(((?step2119 + ?targetMotifMatchRegionMatchBeginPositionMF_03056107) - 1) AS ?thisPositionOn34) . BIND(?this AS ?pfs1t120) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb31) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse32) . FILTER ((BOUND(?thisPositionOn33) && BOUND(?thisPositionOn34))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a30')) AS ?annotation30) . BIND(?this AS ?pfs29) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch125 faldo:location ?templateMotifSequenceMatchRegionQ03774126 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ03774128 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_03056121 . ?templateMotifSequenceMatchRegionQ03774126 faldo:begin ?templateMotifSequenceMatchBeginQ03774127 . ?templateMotifSequenceMatchBeginQ03774127 faldo:position ?templateMotifSequenceMatchBeginPositionQ03774122 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ03774128 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch129 faldo:location ?targetMotifMatchRegionMatch130 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03056132 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_03056123 . ?targetMotifMatchRegionMatch130 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03056131 . ?targetMotifMatchRegionMatchBeginMF_03056131 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03056124 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03056132 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056121, 1, (STRLEN(?templateMotifCigarQ03774MF_03056121) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056121, CONCAT('^(?:-*[^-]){', STR(((193 - ?templateMotifSequenceMatchBeginPositionQ03774122) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1133) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056123, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056123) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056123, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056123) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), '')))), '[^-]', ''))) AS ?step2134) . BIND(((?step2134 + ?targetMotifMatchRegionMatchBeginPositionMF_03056124) - 1) AS ?thisPositionOn39) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056121, 1, (STRLEN(?templateMotifCigarQ03774MF_03056121) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056121, CONCAT('^(?:-*[^-]){', STR(((237 - ?templateMotifSequenceMatchBeginPositionQ03774122) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1135) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056123, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056123) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056123, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056123) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), '')))), '[^-]', ''))) AS ?step2136) . BIND(((?step2136 + ?targetMotifMatchRegionMatchBeginPositionMF_03056124) - 1) AS ?thisPositionOn40) . BIND(?this AS ?pfs1t137) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse38) . FILTER ((BOUND(?thisPositionOn39) && BOUND(?thisPositionOn40))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch142 faldo:location ?templateMotifSequenceMatchRegionQ03774143 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ03774145 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_03056138 . ?templateMotifSequenceMatchRegionQ03774143 faldo:begin ?templateMotifSequenceMatchBeginQ03774144 . ?templateMotifSequenceMatchBeginQ03774144 faldo:position ?templateMotifSequenceMatchBeginPositionQ03774139 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ03774145 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch146 faldo:location ?targetMotifMatchRegionMatch147 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03056149 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_03056140 . ?targetMotifMatchRegionMatch147 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03056148 . ?targetMotifMatchRegionMatchBeginMF_03056148 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03056141 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03056149 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056138, 1, (STRLEN(?templateMotifCigarQ03774MF_03056138) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056138, CONCAT('^(?:-*[^-]){', STR(((238 - ?templateMotifSequenceMatchBeginPositionQ03774139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1150) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056140, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056140) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056140, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056140) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), '')))), '[^-]', ''))) AS ?step2151) . BIND(((?step2151 + ?targetMotifMatchRegionMatchBeginPositionMF_03056141) - 1) AS ?thisPositionOn45) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056138, 1, (STRLEN(?templateMotifCigarQ03774MF_03056138) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056138, CONCAT('^(?:-*[^-]){', STR(((279 - ?templateMotifSequenceMatchBeginPositionQ03774139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056140, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056140) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056140, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056140) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) . BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_03056141) - 1) AS ?thisPositionOn46) . BIND(?this AS ?pfs1t154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb43) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse44) . FILTER ((BOUND(?thisPositionOn45) && BOUND(?thisPositionOn46))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a42')) AS ?annotation42) . BIND(?this AS ?pfs41) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch159 faldo:location ?templateMotifSequenceMatchRegionQ03774160 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ03774162 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ03774MF_03056155 . ?templateMotifSequenceMatchRegionQ03774160 faldo:begin ?templateMotifSequenceMatchBeginQ03774161 . ?templateMotifSequenceMatchBeginQ03774161 faldo:position ?templateMotifSequenceMatchBeginPositionQ03774156 ; faldo:reference isoform:Q03774-1 . ?templateMotifSequenceProfileAlignmentOperationQ03774162 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?targetMotifMatch163 faldo:location ?targetMotifMatchRegionMatch164 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03056166 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ03774MF_03056157 . ?targetMotifMatchRegionMatch164 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03056165 . ?targetMotifMatchRegionMatchBeginMF_03056165 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03056158 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03056166 edam:has_input signature:MF_03056 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056155, 1, (STRLEN(?templateMotifCigarQ03774MF_03056155) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056155, CONCAT('^(?:-*[^-]){', STR(((308 - ?templateMotifSequenceMatchBeginPositionQ03774156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056157, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056157) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056157, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056157) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), '')))), '[^-]', ''))) AS ?step2168) . BIND(((?step2168 + ?targetMotifMatchRegionMatchBeginPositionMF_03056158) - 1) AS ?thisPositionOn51) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ03774MF_03056155, 1, (STRLEN(?templateMotifCigarQ03774MF_03056155) - STRLEN(REPLACE(?templateMotifCigarQ03774MF_03056155, CONCAT('^(?:-*[^-]){', STR(((354 - ?templateMotifSequenceMatchBeginPositionQ03774156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1169) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ03774MF_03056157, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056157) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ03774MF_03056157, 1, (STRLEN(?targetMotifMatchCigarQ03774MF_03056157) - STRLEN(REPLACE(?targetMotifMatchCigarQ03774MF_03056157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), '')))), '[^-]', ''))) AS ?step2170) . BIND(((?step2170 + ?targetMotifMatchRegionMatchBeginPositionMF_03056158) - 1) AS ?thisPositionOn52) . BIND(?this AS ?pfs1t171) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb49) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse50) . FILTER ((BOUND(?thisPositionOn51) && BOUND(?thisPositionOn52))) . BIND(URI(CONCAT(STR(?this), '#MF_03056a48')) AS ?annotation48) . BIND(?this AS ?pfs47) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4751 . BIND(?this AS ?case2) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:50557 . BIND(?this AS ?case3) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(?this AS ?case4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7214 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:7214 . })) . BIND(?this AS ?case6) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon172 {taxon:7742 taxon:5782} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon172 . BIND(?this AS ?case7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon173 {taxon:4930 taxon:7214} ?thisOrganism rdfs:subClassOf+ ?supertaxon173 . })) . BIND(?this AS ?case8) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon174 {taxon:4751 taxon:7742 taxon:5782} ?thisOrganism rdfs:subClassOf+ ?supertaxon174 . })) . BIND(?this AS ?case9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon175 {taxon:7742 taxon:5782 taxon:50557 taxon:4751} ?thisOrganism rdfs:subClassOf+ ?supertaxon175 . })) . BIND(?this AS ?case10) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_03056 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03056#construct |