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http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-121
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-66
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-83
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-130
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-123
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-108
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-126
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-124
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-102
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-104
http://purl.uniprot.org/unirules/MF_03071#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_03071#construct-template-109
http://purl.uniprot.org/unirules/MF_03071#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_03071#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_03071#construct-where-list-0
http://purl.uniprot.org/unirules/MF_03071#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_03071#construct-template-list-0
http://purl.uniprot.org/unirules/MF_03071#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:813411 up:source unirule:MF_03071 . _:813412 up:source unirule:MF_03071 . _:813413 up:source unirule:MF_03071 . _:813414 up:source unirule:MF_03071 . _:813415 up:source unirule:MF_03071 . _:813416 up:source unirule:MF_03071 . _:813417 up:source unirule:MF_03071 . _:813418 up:source unirule:MF_03071 . _:813419 up:source unirule:MF_03071 . _:813420 up:source unirule:MF_03071 . _:813421 up:source unirule:MF_03071 . _:813422 up:source unirule:MF_03071 . _:813423 up:source unirule:MF_03071 . _:813424 up:source unirule:MF_03071 . _:813425 up:source unirule:MF_03071 . _:813426 up:source unirule:MF_03071 . _:813427 up:source unirule:MF_03071 . _:813428 up:source unirule:MF_03071 . _:813429 up:source unirule:MF_03071 . _:813430 up:source unirule:MF_03071 . _:813431 up:source unirule:MF_03071 . _:813432 up:source unirule:MF_03071 . _:813433 up:source unirule:MF_03071 . _:813434 up:source unirule:MF_03071 . _:813435 up:source unirule:MF_03071 . _:813436 up:source unirule:MF_03071 . _:813437 up:source unirule:MF_03071 . _:813438 up:source unirule:MF_03071 . _:813439 up:source unirule:MF_03071 . _:813440 up:source unirule:MF_03071 . _:813441 up:source unirule:MF_03071 . _:813442 up:source unirule:MF_03071 . _:813443 up:source unirule:MF_03071 . _:813444 up:source unirule:MF_03071 . _:813445 up:source unirule:MF_03071 . _:813446 up:source unirule:MF_03071 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 ; up:classifiedWith GO:0002039 , GO:0003677 , GO:0003678 , GO:0005524 , GO:0005634 , GO:0006338 , GO:0008013 , GO:0008094 , GO:0016887 , GO:0030178 , GO:0042393 , GO:0043066 , GO:0045892 , GO:0045893 , GO:0071339 , keyword:10 , keyword:156 , keyword:238 , keyword:347 , keyword:378 , keyword:539 , keyword:547 , keyword:677 , keyword:678 , keyword:67 , keyword:804 , keyword:805 , keyword:879 ; up:recommendedName ?name0 . ?name0 up:ecName '3.6.4.-' ; up:fullName 'Chromodomain-helicase-DNA-binding protein 8' ; up:shortName 'CHD-8' ; rdf:type up:Structured_Name . ?name1 up:fullName 'ATP-dependent helicase CHD8' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'CHD8' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the SNF2/RAD54 helicase family. CHD8 subfamily.' . ?case4 up:classifiedWith keyword:1017 , keyword:832 . ?pfs7 up:annotation ?annotation8 . ?annotation8 faldo:begin ?pfsb9 ; faldo:end ?pfse10 ; rdf:type up:Cross-link_Annotation ; rdfs:comment 'Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO)' . ?pfsb9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfse10 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?pfs13 up:annotation ?annotation14 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; rdf:type up:Region_Annotation ; rdfs:comment 'Interaction with FAM124B' . ?pfsb15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . _:813447 a rdf:Statement ; up:attribution _:813411 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:813448 a rdf:Statement ; up:attribution _:813412 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:813449 a rdf:Statement ; up:attribution _:813413 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:813450 a rdf:Statement ; up:attribution _:813414 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:813451 a rdf:Statement ; up:attribution _:813415 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:10 . _:813452 a rdf:Statement ; up:attribution _:813416 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:813453 a rdf:Statement ; up:attribution _:813417 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:156 . _:813454 a rdf:Statement ; up:attribution _:813418 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:813455 a rdf:Statement ; up:attribution _:813419 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:347 . _:813456 a rdf:Statement ; up:attribution _:813420 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:813457 a rdf:Statement ; up:attribution _:813421 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:813458 a rdf:Statement ; up:attribution _:813422 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:539 . _:813459 a rdf:Statement ; up:attribution _:813423 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:677 . _:813460 a rdf:Statement ; up:attribution _:813424 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:678 . _:813461 a rdf:Statement ; up:attribution _:813425 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:804 . _:813462 a rdf:Statement ; up:attribution _:813426 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:805 . _:813463 a rdf:Statement ; up:attribution _:813427 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:879 . _:813464 a rdf:Statement ; up:attribution _:813428 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005634 . _:813465 a rdf:Statement ; up:attribution _:813429 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0071339 . _:813466 a rdf:Statement ; up:attribution _:813430 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:813467 a rdf:Statement ; up:attribution _:813431 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003677 . _:813468 a rdf:Statement ; up:attribution _:813432 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003678 . _:813469 a rdf:Statement ; up:attribution _:813433 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008094 . _:813470 a rdf:Statement ; up:attribution _:813434 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0002039 . _:813471 a rdf:Statement ; up:attribution _:813435 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042393 . _:813472 a rdf:Statement ; up:attribution _:813436 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008013 . _:813473 a rdf:Statement ; up:attribution _:813437 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006338 . _:813474 a rdf:Statement ; up:attribution _:813438 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016887 . _:813475 a rdf:Statement ; up:attribution _:813439 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045893 . _:813476 a rdf:Statement ; up:attribution _:813440 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045892 . _:813477 a rdf:Statement ; up:attribution _:813441 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0030178 . _:813478 a rdf:Statement ; up:attribution _:813442 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0043066 . _:813479 a rdf:Statement ; up:attribution _:813443 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1017 . _:813480 a rdf:Statement ; up:attribution _:813444 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:832 . _:813481 a rdf:Statement ; up:source unirule:MF_03071 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:813482 a rdf:Statement ; up:attribution _:813445 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:813483 a rdf:Statement ; up:source unirule:MF_03071 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:813484 a rdf:Statement ; up:attribution _:813446 ; rdf:subject ?pfs13 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03071 #Rule MF_03071 Created by:? on:2016-08-03 Modified by:Andrea Auchincloss on:2025-03-18 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03071 . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(URI(CONCAT(STR(?this), '#MF_03071a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_03071a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_03071a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch23 faldo:location ?templateMotifSequenceMatchRegionQ9JIX524 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9JIX526 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9JIX5MF_0307119 . ?templateMotifSequenceMatchRegionQ9JIX524 faldo:begin ?templateMotifSequenceMatchBeginQ9JIX525 . ?templateMotifSequenceMatchBeginQ9JIX525 faldo:position ?templateMotifSequenceMatchBeginPositionQ9JIX520 ; faldo:reference isoform:Q9JIX5-1 . ?templateMotifSequenceProfileAlignmentOperationQ9JIX526 edam:has_input signature:MF_03071 ; rdf:type edam:operation_0300 . ?targetMotifMatch27 faldo:location ?targetMotifMatchRegionMatch28 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0307130 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9JIX5MF_0307121 . ?targetMotifMatchRegionMatch28 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0307129 . ?targetMotifMatchRegionMatchBeginMF_0307129 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0307122 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0307130 edam:has_input signature:MF_03071 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagsumo) . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9JIX5MF_0307119, 1, (STRLEN(?templateMotifCigarQ9JIX5MF_0307119) - STRLEN(REPLACE(?templateMotifCigarQ9JIX5MF_0307119, CONCAT('^(?:-*[^-]){', STR(((609 - ?templateMotifSequenceMatchBeginPositionQ9JIX520) + 1)), '}'), '')))), '[a-z]', '')) AS ?step131) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9JIX5MF_0307121, 1, (STRLEN(?targetMotifMatchCigarQ9JIX5MF_0307121) - STRLEN(REPLACE(?targetMotifMatchCigarQ9JIX5MF_0307121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9JIX5MF_0307121, 1, (STRLEN(?targetMotifMatchCigarQ9JIX5MF_0307121) - STRLEN(REPLACE(?targetMotifMatchCigarQ9JIX5MF_0307121, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step131), '}'), '')))), '[^-]', ''))) AS ?step232) . BIND(((?step232 + ?targetMotifMatchRegionMatchBeginPositionMF_0307122) - 1) AS ?thisPositionOn11) . BIND(?thisPositionOn11 AS ?thisPositionOn12) . BIND(?this AS ?pfs1t33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb9) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse10) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_03071a8')) AS ?annotation8) . BIND(?this AS ?pfs7) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch38 faldo:location ?templateMotifSequenceMatchRegionQ9HCK839 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HCK841 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ9HCK8MF_0307134 . ?templateMotifSequenceMatchRegionQ9HCK839 faldo:begin ?templateMotifSequenceMatchBeginQ9HCK840 . ?templateMotifSequenceMatchBeginQ9HCK840 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HCK835 ; faldo:reference isoform:Q9HCK8-1 . ?templateMotifSequenceProfileAlignmentOperationQ9HCK841 edam:has_input signature:MF_03071 ; rdf:type edam:operation_0300 . ?targetMotifMatch42 faldo:location ?targetMotifMatchRegionMatch43 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0307145 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ9HCK8MF_0307136 . ?targetMotifMatchRegionMatch43 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0307144 . ?targetMotifMatchRegionMatchBeginMF_0307144 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0307137 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0307145 edam:has_input signature:MF_03071 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HCK8MF_0307134, 1, (STRLEN(?templateMotifCigarQ9HCK8MF_0307134) - STRLEN(REPLACE(?templateMotifCigarQ9HCK8MF_0307134, CONCAT('^(?:-*[^-]){', STR(((1789 - ?templateMotifSequenceMatchBeginPositionQ9HCK835) + 1)), '}'), '')))), '[a-z]', '')) AS ?step146) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HCK8MF_0307136, 1, (STRLEN(?targetMotifMatchCigarQ9HCK8MF_0307136) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HCK8MF_0307136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step146), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HCK8MF_0307136, 1, (STRLEN(?targetMotifMatchCigarQ9HCK8MF_0307136) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HCK8MF_0307136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step146), '}'), '')))), '[^-]', ''))) AS ?step247) . BIND(((?step247 + ?targetMotifMatchRegionMatchBeginPositionMF_0307137) - 1) AS ?thisPositionOn17) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HCK8MF_0307134, 1, (STRLEN(?templateMotifCigarQ9HCK8MF_0307134) - STRLEN(REPLACE(?templateMotifCigarQ9HCK8MF_0307134, CONCAT('^(?:-*[^-]){', STR(((2302 - ?templateMotifSequenceMatchBeginPositionQ9HCK835) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HCK8MF_0307136, 1, (STRLEN(?targetMotifMatchCigarQ9HCK8MF_0307136) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HCK8MF_0307136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HCK8MF_0307136, 1, (STRLEN(?targetMotifMatchCigarQ9HCK8MF_0307136) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HCK8MF_0307136, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0307137) - 1) AS ?thisPositionOn18) . BIND(?this AS ?pfs2t50) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse16) . FILTER ((BOUND(?thisPositionOn17) && BOUND(?thisPositionOn18))) . BIND(URI(CONCAT(STR(?this), '#MF_03071a14')) AS ?annotation14) . BIND(?this AS ?pfs13) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag51) . } BIND(IF(BOUND(?tagsumo), ?caseWithTag51, ?UNBOUND_VARIABLE) AS ?case4) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:40674 . })) . BIND(?this AS ?case6) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_03071http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_03071#construct
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