| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-84 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-117 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-66 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-134 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-89 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-65 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-111 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-135 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-110 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-64 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-112 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-136 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-137 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-87 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-63 |
| http://purl.uniprot.org/unirules/MF_03203#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03203#construct-template-113 |
| http://purl.uniprot.org/unirules/MF_03203#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03203#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03203#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03203#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03203#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03203#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:877777 up:source unirule:MF_03203 .
_:877778 up:source unirule:MF_03203 .
_:877779 up:source unirule:MF_03203 .
_:877780 up:source unirule:MF_03203 .
_:877781 up:source unirule:MF_03203 .
_:877782 up:source unirule:MF_03203 .
_:877783 up:source unirule:MF_03203 .
_:877784 up:source unirule:MF_03203 .
_:877785 up:source unirule:MF_03203 .
_:877786 up:source unirule:MF_03203 .
_:877787 up:source unirule:MF_03203 .
_:877788 up:source unirule:MF_03203 .
_:877789 up:source unirule:MF_03203 .
_:877790 up:source unirule:MF_03203 .
_:877791 up:source unirule:MF_03203 .
_:877792 up:source unirule:MF_03203 .
_:877793 up:source unirule:MF_03203 .
_:877794 up:source unirule:MF_03203 .
_:877795 up:source unirule:MF_03203 .
_:877796 up:source unirule:MF_03203 .
_:877797 up:source unirule:MF_03203 .
_:877798 up:source unirule:MF_03203 .
_:877799 up:source unirule:MF_03203 .
_:877800 up:source unirule:MF_03203 .
_:877801 up:source unirule:MF_03203 .
_:877802 up:source unirule:MF_03203 .
_:877803 up:source unirule:MF_03203 .
_:877804 up:source unirule:MF_03203 .
_:877805 up:source unirule:MF_03203 .
_:877806 up:source unirule:MF_03203 .
_:877807 up:source unirule:MF_03203 .
_:877808 up:source unirule:MF_03203 .
_:877809 up:source unirule:MF_03203 .
?this up:alternativeName ?name1 ,
?name3 ,
?name4 ,
?name5 ;
up:annotation ?annotation7 ,
?annotation8 ,
?annotation10 ,
?annotation11 ,
?annotation13 ,
?annotation14 ;
up:classifiedWith GO:0005789 ,
GO:0006636 ,
GO:0009922 ,
GO:0016020 ,
GO:0019367 ,
GO:0034625 ,
GO:0034626 ,
GO:0035338 ,
GO:0042761 ,
keyword:256 ,
keyword:275 ,
keyword:276 ,
keyword:325 ,
keyword:443 ,
keyword:444 ,
keyword:472 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.3.1.199' ;
up:fullName 'Elongation of very long chain fatty acids protein 3' ;
rdf:type up:Structured_Name .
?name1 up:fullName ?nameValue2 ;
rdf:type up:Structured_Name .
?name3 up:fullName 'ELOVL fatty acid elongase 3' ;
up:shortName 'ELOVL FA elongase 3' ;
rdf:type up:Structured_Name .
?name4 up:fullName 'Very long chain 3-ketoacyl-CoA synthase 3' ;
rdf:type up:Structured_Name .
?name5 up:fullName 'Very long chain 3-oxoacyl-CoA synthase 3' ;
rdf:type up:Structured_Name .
?gene6 skos:prefLabel 'ELOVL3' .
?annotation7 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme with higher activity toward C18 acyl-CoAs, especially C18:0 acyl-CoAs. May participate to the production of saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators.' .
?annotation8 up:activity ?activity9 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity9 up:catalyticActivity ;
up:enzymeClass .
?annotation10 a up:Pathway_Annotation ;
rdfs:comment 'Lipid metabolism; polyunsaturated fatty acid biosynthesis.' .
?annotation11 a up:Subcellular_Location_Annotation .
?annotation11li12 up:cellularComponent .
?annotation13 a up:PTM_Annotation ;
rdfs:comment 'N-Glycosylated.' .
?annotation14 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ELO family. ELOVL3 subfamily.' .
?pfs16 up:annotation ?annotation17 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
rdf:type up:Motif_Annotation ;
rdfs:comment 'Di-lysine motif' .
?pfsb18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?sam22 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane23 faldo:begin ?transmembraneb24 ;
faldo:end ?transmembranee25 .
?transmembraneb24 faldo:position ?transmembranebp26 .
?transmembranee25 faldo:position ?transmembraneep27 .
?keyword28 up:range ?transmembrane23 .
?keyword29 up:range ?transmembrane23 .
?keyword30 up:range ?transmembrane23 .
_:877810 a rdf:Statement ;
up:attribution _:877777 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:877811 a rdf:Statement ;
up:attribution _:877778 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:877812 a rdf:Statement ;
up:attribution _:877779 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name3 .
_:877813 a rdf:Statement ;
up:attribution _:877780 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name4 .
_:877814 a rdf:Statement ;
up:attribution _:877781 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name5 .
_:877815 a rdf:Statement ;
up:attribution _:877782 ;
rdf:subject ?gene6 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene6 .
_:877816 a rdf:Statement ;
up:attribution _:877783 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:877817 a rdf:Statement ;
up:attribution _:877784 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:877818 a rdf:Statement ;
up:attribution _:877785 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:877819 a rdf:Statement ;
up:attribution _:877786 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:877820 a rdf:Statement ;
up:attribution _:877787 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:877821 a rdf:Statement ;
up:attribution _:877788 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:877822 a rdf:Statement ;
up:attribution _:877789 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:256 .
_:877823 a rdf:Statement ;
up:attribution _:877790 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:275 .
_:877824 a rdf:Statement ;
up:attribution _:877791 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:276 .
_:877825 a rdf:Statement ;
up:attribution _:877792 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:325 .
_:877826 a rdf:Statement ;
up:attribution _:877793 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:444 .
_:877827 a rdf:Statement ;
up:attribution _:877794 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:443 .
_:877828 a rdf:Statement ;
up:attribution _:877795 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:877829 a rdf:Statement ;
up:attribution _:877796 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:877830 a rdf:Statement ;
up:attribution _:877797 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005789 .
_:877831 a rdf:Statement ;
up:attribution _:877798 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016020 .
_:877832 a rdf:Statement ;
up:attribution _:877799 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009922 .
_:877833 a rdf:Statement ;
up:attribution _:877800 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006636 .
_:877834 a rdf:Statement ;
up:attribution _:877801 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019367 .
_:877835 a rdf:Statement ;
up:attribution _:877802 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034625 .
_:877836 a rdf:Statement ;
up:attribution _:877803 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034626 .
_:877837 a rdf:Statement ;
up:attribution _:877804 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0035338 .
_:877838 a rdf:Statement ;
up:attribution _:877805 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042761 .
_:877839 a rdf:Statement ;
up:source unirule:MF_03203 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:877840 a rdf:Statement ;
up:attribution _:877806 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:877841 a rdf:Statement ;
up:attribution _:877807 ;
rdf:subject ?sam22 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:877842 a rdf:Statement ;
up:attribution _:877808 ;
rdf:subject ?sam22 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:877843 a rdf:Statement ;
up:attribution _:877809 ;
rdf:subject ?sam22 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03203
#Rule MF_03203 Created by:? on:2013-12-16 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03203 .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(URI(CONCAT(STR(?this), '#MF_03203a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a1')) AS ?name1) .
OPTIONAL {
?this up:encodedBy ?gene34 .
?gene34 up:locusName ?geneLocus32 .
}
OPTIONAL {
?this up:encodedBy ?gene34 .
?gene34 up:orfName ?geneOrf33 .
}
BIND(IF(BOUND(?geneLocus32), ?geneLocus32, ?geneOrf33) AS ?part31) .
BIND(CONCAT('3-keto acyl-CoA synthase ', ?part31) AS ?nameValue2) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a3')) AS ?name3) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a4')) AS ?name4) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a5')) AS ?name5) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a11')) AS ?annotation11) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a13')) AS ?annotation13) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a14')) AS ?annotation14) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionQ9HB0340 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HB0342 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HB03MF_0320335 .
?templateMotifSequenceMatchRegionQ9HB0340 faldo:begin ?templateMotifSequenceMatchBeginQ9HB0341 .
?templateMotifSequenceMatchBeginQ9HB0341 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HB0336 ;
faldo:reference isoform:Q9HB03-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HB0342 edam:has_input signature:MF_03203 ;
rdf:type edam:operation_0300 .
?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0320346 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HB03MF_0320337 .
?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0320345 .
?targetMotifMatchRegionMatchBeginMF_0320345 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0320338 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0320346 edam:has_input signature:MF_03203 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagERmotif) .
BIND((STRLEN(?thisSequenceValue) - 4) AS ?thisPositionOn20) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) .
FILTER (REGEX('K[ARNDCQEGHILKMFPSTWYVBZJUOX]K[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)$', SUBSTR(?thisSequenceValue, ?thisPositionOn20, (?thisPositionOn21 - ?thisPositionOn20)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a17')) AS ?annotation17) .
BIND(?this AS ?pfs16) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag48) .
}
BIND(IF(BOUND(?tagERmotif), ?caseWithTag48, ?UNBOUND_VARIABLE) AS ?case15) .
OPTIONAL {
?this up:annotation ?samtransmembrane49 ;
up:sequence ?thisSequence .
?samtransmembrane49 up:range ?samtransmembraner50 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner50 faldo:begin ?samtransmembraneb51 ;
faldo:end ?samtransmembranee52 .
?samtransmembraneb51 faldo:position ?samtransmembranebp53 ;
faldo:reference ?thisSequence .
?samtransmembranee52 faldo:position ?samtransmembraneep54 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam22) .
}
BIND(URI(CONCAT(STR(?this), '#MF_03203a28')) AS ?keyword28) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a29')) AS ?keyword29) .
BIND(URI(CONCAT(STR(?this), '#MF_03203a30')) AS ?keyword30) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_03203 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03203#construct |
