| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-90 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-112 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-91 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-92 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-93 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-94 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-95 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-96 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-97 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-119 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-98 |
| http://purl.uniprot.org/unirules/MF_03206#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03206#construct-template-99 |
| http://purl.uniprot.org/unirules/MF_03206#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03206#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03206#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03206#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03206#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03206#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:879479 up:source unirule:MF_03206 .
_:879480 up:source unirule:MF_03206 .
_:879481 up:source unirule:MF_03206 .
_:879482 up:source unirule:MF_03206 .
_:879483 up:source unirule:MF_03206 .
_:879484 up:source unirule:MF_03206 .
_:879485 up:source unirule:MF_03206 .
_:879486 up:source unirule:MF_03206 .
_:879487 up:source unirule:MF_03206 .
_:879488 up:source unirule:MF_03206 .
_:879489 up:source unirule:MF_03206 .
_:879490 up:source unirule:MF_03206 .
_:879491 up:source unirule:MF_03206 .
_:879492 up:source unirule:MF_03206 .
_:879493 up:source unirule:MF_03206 .
_:879494 up:source unirule:MF_03206 .
_:879495 up:source unirule:MF_03206 .
_:879496 up:source unirule:MF_03206 .
_:879497 up:source unirule:MF_03206 .
_:879498 up:source unirule:MF_03206 .
_:879499 up:source unirule:MF_03206 .
_:879500 up:source unirule:MF_03206 .
_:879501 up:source unirule:MF_03206 .
_:879502 up:source unirule:MF_03206 .
_:879503 up:source unirule:MF_03206 .
_:879504 up:source unirule:MF_03206 .
_:879505 up:source unirule:MF_03206 .
_:879506 up:source unirule:MF_03206 .
_:879507 up:source unirule:MF_03206 .
_:879508 up:source unirule:MF_03206 .
_:879509 up:source unirule:MF_03206 .
?this up:alternativeName ?name1 ,
?name3 ,
?name4 ,
?name5 ;
up:annotation ?annotation7 ,
?annotation8 ,
?annotation10 ,
?annotation11 ,
?annotation13 ,
?annotation14 ;
up:classifiedWith GO:0005789 ,
GO:0006636 ,
GO:0009922 ,
GO:0016020 ,
GO:0019367 ,
GO:0034625 ,
GO:0035338 ,
keyword:256 ,
keyword:275 ,
keyword:276 ,
keyword:325 ,
keyword:443 ,
keyword:444 ,
keyword:472 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.3.1.199' ;
up:fullName 'Elongation of very long chain fatty acids protein 6' ;
rdf:type up:Structured_Name .
?name1 up:fullName ?nameValue2 ;
rdf:type up:Structured_Name .
?name3 up:fullName 'ELOVL fatty acid elongase 6' ;
up:shortName 'ELOVL FA elongase 6' ;
rdf:type up:Structured_Name .
?name4 up:fullName 'Very long chain 3-ketoacyl-CoA synthase 6' ;
rdf:type up:Structured_Name .
?name5 up:fullName 'Very long chain 3-oxoacyl-CoA synthase 6' ;
rdf:type up:Structured_Name .
?gene6 skos:prefLabel 'ELOVL6' .
?annotation7 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that elongates fatty acids with 12, 14 and 16 carbons with higher activity toward C16:0 acyl-CoAs. Catalyzes the synthesis of unsaturated C16 long chain fatty acids and, to a lesser extent, C18:0 and those with low desaturation degree. May participate to the production of saturated and monounsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators.' .
?annotation8 up:activity ?activity9 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity9 up:catalyticActivity ;
up:enzymeClass .
?annotation10 a up:Pathway_Annotation ;
rdfs:comment 'Lipid metabolism; fatty acid biosynthesis.' .
?annotation11 a up:Subcellular_Location_Annotation .
?annotation11li12 up:cellularComponent .
?annotation13 a up:PTM_Annotation ;
rdfs:comment 'N-Glycosylated.' .
?annotation14 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ELO family. ELOVL6 subfamily.' .
?pfs16 up:annotation ?annotation17 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
rdf:type up:Motif_Annotation ;
rdfs:comment 'Di-lysine motif' .
?pfsb18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?sam22 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane23 faldo:begin ?transmembraneb24 ;
faldo:end ?transmembranee25 .
?transmembraneb24 faldo:position ?transmembranebp26 .
?transmembranee25 faldo:position ?transmembraneep27 .
?keyword28 up:range ?transmembrane23 .
?keyword29 up:range ?transmembrane23 .
?keyword30 up:range ?transmembrane23 .
_:879510 a rdf:Statement ;
up:attribution _:879479 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:879511 a rdf:Statement ;
up:attribution _:879480 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:879512 a rdf:Statement ;
up:attribution _:879481 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name3 .
_:879513 a rdf:Statement ;
up:attribution _:879482 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name4 .
_:879514 a rdf:Statement ;
up:attribution _:879483 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name5 .
_:879515 a rdf:Statement ;
up:attribution _:879484 ;
rdf:subject ?gene6 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene6 .
_:879516 a rdf:Statement ;
up:attribution _:879485 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:879517 a rdf:Statement ;
up:attribution _:879486 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:879518 a rdf:Statement ;
up:attribution _:879487 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:879519 a rdf:Statement ;
up:attribution _:879488 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:879520 a rdf:Statement ;
up:attribution _:879489 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:879521 a rdf:Statement ;
up:attribution _:879490 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:879522 a rdf:Statement ;
up:attribution _:879491 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:256 .
_:879523 a rdf:Statement ;
up:attribution _:879492 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:275 .
_:879524 a rdf:Statement ;
up:attribution _:879493 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:276 .
_:879525 a rdf:Statement ;
up:attribution _:879494 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:325 .
_:879526 a rdf:Statement ;
up:attribution _:879495 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:444 .
_:879527 a rdf:Statement ;
up:attribution _:879496 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:443 .
_:879528 a rdf:Statement ;
up:attribution _:879497 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:879529 a rdf:Statement ;
up:attribution _:879498 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:879530 a rdf:Statement ;
up:attribution _:879499 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005789 .
_:879531 a rdf:Statement ;
up:attribution _:879500 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016020 .
_:879532 a rdf:Statement ;
up:attribution _:879501 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009922 .
_:879533 a rdf:Statement ;
up:attribution _:879502 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006636 .
_:879534 a rdf:Statement ;
up:attribution _:879503 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019367 .
_:879535 a rdf:Statement ;
up:attribution _:879504 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034625 .
_:879536 a rdf:Statement ;
up:attribution _:879505 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0035338 .
_:879537 a rdf:Statement ;
up:source unirule:MF_03206 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:879538 a rdf:Statement ;
up:attribution _:879506 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:879539 a rdf:Statement ;
up:attribution _:879507 ;
rdf:subject ?sam22 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:879540 a rdf:Statement ;
up:attribution _:879508 ;
rdf:subject ?sam22 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:879541 a rdf:Statement ;
up:attribution _:879509 ;
rdf:subject ?sam22 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03206
#Rule MF_03206 Created by:? on:2013-12-16 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03206 .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(URI(CONCAT(STR(?this), '#MF_03206a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a1')) AS ?name1) .
OPTIONAL {
?this up:encodedBy ?gene34 .
?gene34 up:locusName ?geneLocus32 .
}
OPTIONAL {
?this up:encodedBy ?gene34 .
?gene34 up:orfName ?geneOrf33 .
}
BIND(IF(BOUND(?geneLocus32), ?geneLocus32, ?geneOrf33) AS ?part31) .
BIND(CONCAT('3-keto acyl-CoA synthase ', ?part31) AS ?nameValue2) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a3')) AS ?name3) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a4')) AS ?name4) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a5')) AS ?name5) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a11')) AS ?annotation11) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a13')) AS ?annotation13) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a14')) AS ?annotation14) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch39 faldo:location ?templateMotifSequenceMatchRegionQ9H5J440 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9H5J442 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9H5J4MF_0320635 .
?templateMotifSequenceMatchRegionQ9H5J440 faldo:begin ?templateMotifSequenceMatchBeginQ9H5J441 .
?templateMotifSequenceMatchBeginQ9H5J441 faldo:position ?templateMotifSequenceMatchBeginPositionQ9H5J436 ;
faldo:reference isoform:Q9H5J4-1 .
?templateMotifSequenceProfileAlignmentOperationQ9H5J442 edam:has_input signature:MF_03206 ;
rdf:type edam:operation_0300 .
?targetMotifMatch43 faldo:location ?targetMotifMatchRegionMatch44 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0320646 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9H5J4MF_0320637 .
?targetMotifMatchRegionMatch44 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0320645 .
?targetMotifMatchRegionMatchBeginMF_0320645 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0320638 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0320646 edam:has_input signature:MF_03206 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagERmotif) .
BIND((STRLEN(?thisSequenceValue) - 3) AS ?thisPositionOn20) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) .
FILTER (REGEX('K[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)K$', SUBSTR(?thisSequenceValue, ?thisPositionOn20, (?thisPositionOn21 - ?thisPositionOn20)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a17')) AS ?annotation17) .
BIND(?this AS ?pfs16) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag48) .
}
BIND(IF(BOUND(?tagERmotif), ?caseWithTag48, ?UNBOUND_VARIABLE) AS ?case15) .
OPTIONAL {
?this up:annotation ?samtransmembrane49 ;
up:sequence ?thisSequence .
?samtransmembrane49 up:range ?samtransmembraner50 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner50 faldo:begin ?samtransmembraneb51 ;
faldo:end ?samtransmembranee52 .
?samtransmembraneb51 faldo:position ?samtransmembranebp53 ;
faldo:reference ?thisSequence .
?samtransmembranee52 faldo:position ?samtransmembraneep54 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam22) .
}
BIND(URI(CONCAT(STR(?this), '#MF_03206a28')) AS ?keyword28) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a29')) AS ?keyword29) .
BIND(URI(CONCAT(STR(?this), '#MF_03206a30')) AS ?keyword30) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_03206 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03206#construct |
