| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-105 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-129 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-84 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-126 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-83 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-103 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-82 |
| http://purl.uniprot.org/unirules/MF_03207#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03207#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_03207#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03207#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03207#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03207#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03207#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03207#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:880057 up:source unirule:MF_03207 .
_:880058 up:source unirule:MF_03207 .
_:880059 up:source unirule:MF_03207 .
_:880060 up:source unirule:MF_03207 .
_:880061 up:source unirule:MF_03207 .
_:880062 up:source unirule:MF_03207 .
_:880063 up:source unirule:MF_03207 .
_:880064 up:source unirule:MF_03207 .
_:880065 up:source unirule:MF_03207 .
_:880066 up:source unirule:MF_03207 .
_:880067 up:source unirule:MF_03207 .
_:880068 up:source unirule:MF_03207 .
_:880069 up:source unirule:MF_03207 .
_:880070 up:source unirule:MF_03207 .
_:880071 up:source unirule:MF_03207 .
_:880072 up:source unirule:MF_03207 .
_:880073 up:source unirule:MF_03207 .
_:880074 up:source unirule:MF_03207 .
_:880075 up:source unirule:MF_03207 .
_:880076 up:source unirule:MF_03207 .
_:880077 up:source unirule:MF_03207 .
_:880078 up:source unirule:MF_03207 .
_:880079 up:source unirule:MF_03207 .
_:880080 up:source unirule:MF_03207 .
_:880081 up:source unirule:MF_03207 .
_:880082 up:source unirule:MF_03207 .
_:880083 up:source unirule:MF_03207 .
_:880084 up:source unirule:MF_03207 .
_:880085 up:source unirule:MF_03207 .
_:880086 up:source unirule:MF_03207 .
_:880087 up:source unirule:MF_03207 .
?this up:alternativeName ?name1 ,
?name3 ,
?name4 ,
?name5 ;
up:annotation ?annotation7 ,
?annotation8 ,
?annotation10 ,
?annotation11 ,
?annotation13 ;
up:classifiedWith GO:0005789 ,
GO:0006636 ,
GO:0009922 ,
GO:0016020 ,
GO:0019367 ,
GO:0034625 ,
GO:0034626 ,
GO:0035338 ,
GO:0042761 ,
keyword:256 ,
keyword:275 ,
keyword:276 ,
keyword:443 ,
keyword:444 ,
keyword:472 ,
keyword:808 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.3.1.199' ;
up:fullName 'Elongation of very long chain fatty acids protein 7' ;
rdf:type up:Structured_Name .
?name1 up:fullName ?nameValue2 ;
rdf:type up:Structured_Name .
?name3 up:fullName 'ELOVL fatty acid elongase 7' ;
up:shortName 'ELOVL FA elongase 7' ;
rdf:type up:Structured_Name .
?name4 up:fullName 'Very long chain 3-ketoacyl-CoA synthase 7' ;
rdf:type up:Structured_Name .
?name5 up:fullName 'Very long chain 3-oxoacyl-CoA synthase 7' ;
rdf:type up:Structured_Name .
?gene6 skos:prefLabel 'ELOVL7' .
?annotation7 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme with higher activity toward C18 acyl-CoAs, especially C18:3(n-3) acyl-CoAs and C18:3(n-6)-CoAs. Also active toward C20:4-, C18:0-, C18:1-, C18:2- and C16:0-CoAs, and weakly toward C20:0-CoA. Little or no activity toward C22:0-, C24:0-, or C26:0-CoAs. May participate to the production of saturated and polyunsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators.' .
?annotation8 up:activity ?activity9 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity9 up:catalyticActivity ;
up:enzymeClass .
?annotation10 a up:Pathway_Annotation ;
rdfs:comment 'Lipid metabolism; fatty acid biosynthesis.' .
?annotation11 a up:Subcellular_Location_Annotation .
?annotation11li12 up:cellularComponent .
?annotation13 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ELO family. ELOVL7 subfamily.' .
?pfs15 up:annotation ?annotation16 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
rdf:type up:Motif_Annotation ;
rdfs:comment 'Di-lysine motif' .
?pfsb17 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?sam21 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane22 faldo:begin ?transmembraneb23 ;
faldo:end ?transmembranee24 .
?transmembraneb23 faldo:position ?transmembranebp25 .
?transmembranee24 faldo:position ?transmembraneep26 .
?keyword27 up:range ?transmembrane22 .
?keyword28 up:range ?transmembrane22 .
?keyword29 up:range ?transmembrane22 .
_:880088 a rdf:Statement ;
up:attribution _:880057 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:880089 a rdf:Statement ;
up:attribution _:880058 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:880090 a rdf:Statement ;
up:attribution _:880059 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name3 .
_:880091 a rdf:Statement ;
up:attribution _:880060 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name4 .
_:880092 a rdf:Statement ;
up:attribution _:880061 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name5 .
_:880093 a rdf:Statement ;
up:attribution _:880062 ;
rdf:subject ?gene6 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene6 .
_:880094 a rdf:Statement ;
up:attribution _:880063 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:880095 a rdf:Statement ;
up:attribution _:880064 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:880096 a rdf:Statement ;
up:attribution _:880065 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:880097 a rdf:Statement ;
up:attribution _:880066 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:880098 a rdf:Statement ;
up:attribution _:880067 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:880099 a rdf:Statement ;
up:attribution _:880068 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:256 .
_:880100 a rdf:Statement ;
up:attribution _:880069 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:275 .
_:880101 a rdf:Statement ;
up:attribution _:880070 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:276 .
_:880102 a rdf:Statement ;
up:attribution _:880071 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:444 .
_:880103 a rdf:Statement ;
up:attribution _:880072 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:443 .
_:880104 a rdf:Statement ;
up:attribution _:880073 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:880105 a rdf:Statement ;
up:attribution _:880074 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:880106 a rdf:Statement ;
up:attribution _:880075 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005789 .
_:880107 a rdf:Statement ;
up:attribution _:880076 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016020 .
_:880108 a rdf:Statement ;
up:attribution _:880077 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009922 .
_:880109 a rdf:Statement ;
up:attribution _:880078 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006636 .
_:880110 a rdf:Statement ;
up:attribution _:880079 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019367 .
_:880111 a rdf:Statement ;
up:attribution _:880080 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034625 .
_:880112 a rdf:Statement ;
up:attribution _:880081 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034626 .
_:880113 a rdf:Statement ;
up:attribution _:880082 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0035338 .
_:880114 a rdf:Statement ;
up:attribution _:880083 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042761 .
_:880115 a rdf:Statement ;
up:source unirule:MF_03207 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:880116 a rdf:Statement ;
up:attribution _:880084 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:880117 a rdf:Statement ;
up:attribution _:880085 ;
rdf:subject ?sam21 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:880118 a rdf:Statement ;
up:attribution _:880086 ;
rdf:subject ?sam21 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:880119 a rdf:Statement ;
up:attribution _:880087 ;
rdf:subject ?sam21 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03207
#Rule MF_03207 Created by:? on:2013-12-16 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03207 .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(URI(CONCAT(STR(?this), '#MF_03207a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a1')) AS ?name1) .
OPTIONAL {
?this up:encodedBy ?gene33 .
?gene33 up:locusName ?geneLocus31 .
}
OPTIONAL {
?this up:encodedBy ?gene33 .
?gene33 up:orfName ?geneOrf32 .
}
BIND(IF(BOUND(?geneLocus31), ?geneLocus31, ?geneOrf32) AS ?part30) .
BIND(CONCAT('3-keto acyl-CoA synthase ', ?part30) AS ?nameValue2) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a3')) AS ?name3) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a4')) AS ?name4) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a5')) AS ?name5) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a11')) AS ?annotation11) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a13')) AS ?annotation13) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch38 faldo:location ?templateMotifSequenceMatchRegionA1L3X039 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationA1L3X041 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarA1L3X0MF_0320734 .
?templateMotifSequenceMatchRegionA1L3X039 faldo:begin ?templateMotifSequenceMatchBeginA1L3X040 .
?templateMotifSequenceMatchBeginA1L3X040 faldo:position ?templateMotifSequenceMatchBeginPositionA1L3X035 ;
faldo:reference isoform:A1L3X0-1 .
?templateMotifSequenceProfileAlignmentOperationA1L3X041 edam:has_input signature:MF_03207 ;
rdf:type edam:operation_0300 .
?targetMotifMatch42 faldo:location ?targetMotifMatchRegionMatch43 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0320745 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarA1L3X0MF_0320736 .
?targetMotifMatchRegionMatch43 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0320744 .
?targetMotifMatchRegionMatchBeginMF_0320744 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0320737 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0320745 edam:has_input signature:MF_03207 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagERmotif) .
BIND((STRLEN(?thisSequenceValue) - 4) AS ?thisPositionOn19) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t46) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse18) .
FILTER (REGEX('K[ARNDCQEGHILKMFPSTWYVBZJUOX]K[ARNDCQEGHILKMFPSTWYVBZJUOX]{2)$', SUBSTR(?thisSequenceValue, ?thisPositionOn19, (?thisPositionOn20 - ?thisPositionOn19)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a16')) AS ?annotation16) .
BIND(?this AS ?pfs15) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag47) .
}
BIND(IF(BOUND(?tagERmotif), ?caseWithTag47, ?UNBOUND_VARIABLE) AS ?case14) .
OPTIONAL {
?this up:annotation ?samtransmembrane48 ;
up:sequence ?thisSequence .
?samtransmembrane48 up:range ?samtransmembraner49 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner49 faldo:begin ?samtransmembraneb50 ;
faldo:end ?samtransmembranee51 .
?samtransmembraneb50 faldo:position ?samtransmembranebp52 ;
faldo:reference ?thisSequence .
?samtransmembranee51 faldo:position ?samtransmembraneep53 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam21) .
}
BIND(URI(CONCAT(STR(?this), '#MF_03207a27')) AS ?keyword27) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a28')) AS ?keyword28) .
BIND(URI(CONCAT(STR(?this), '#MF_03207a29')) AS ?keyword29) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_03207 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03207#construct |
