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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-101 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-125 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-100 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-124 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-107 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-106 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-105 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-129 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-104 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-128 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-89 |
| http://purl.uniprot.org/unirules/MF_04062#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04062#construct-template-88 |
| http://purl.uniprot.org/unirules/MF_04062#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_04062#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_04062#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_04062#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_04062#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_04062#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:921144 up:source unirule:MF_04062 . _:921145 up:source unirule:MF_04062 . _:921146 up:source unirule:MF_04062 . _:921147 up:source unirule:MF_04062 . _:921148 up:source unirule:MF_04062 . _:921149 up:source unirule:MF_04062 . _:921150 up:source unirule:MF_04062 . _:921151 up:source unirule:MF_04062 . _:921152 up:source unirule:MF_04062 . _:921153 up:source unirule:MF_04062 . _:921154 up:source unirule:MF_04062 . _:921155 up:source unirule:MF_04062 . _:921156 up:source unirule:MF_04062 . _:921157 up:source unirule:MF_04062 . _:921158 up:source unirule:MF_04062 . _:921159 up:source unirule:MF_04062 . _:921160 up:source unirule:MF_04062 . _:921161 up:source unirule:MF_04062 . _:921162 up:source unirule:MF_04062 . _:921163 up:source unirule:MF_04062 . _:921164 up:source unirule:MF_04062 . _:921165 up:source unirule:MF_04062 . _:921166 up:source unirule:MF_04062 . _:921167 up:source unirule:MF_04062 . _:921168 up:source unirule:MF_04062 . _:921169 up:source unirule:MF_04062 . _:921170 up:source unirule:MF_04062 . _:921171 up:source unirule:MF_04062 . _:921172 up:source unirule:MF_04062 . _:921173 up:source unirule:MF_04062 . _:921174 up:source unirule:MF_04062 . _:921175 up:source unirule:MF_04062 . _:921176 up:source unirule:MF_04062 . _:921177 up:source unirule:MF_04062 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 ; up:classifiedWith GO:0003723 , GO:0003968 , GO:0006351 , GO:0006370 , GO:0019083 , GO:0039523 , GO:0042025 , GO:0044423 , GO:0075526 , keyword:1048 , keyword:1104 , keyword:1157 , keyword:1190 , keyword:1191 , keyword:1195 , keyword:1262 , keyword:506 , keyword:507 , keyword:945 , keyword:946 ; up:recommendedName ?name0 . ?name0 up:fullName 'Polymerase basic protein 2' ; rdf:type up:Structured_Name . ?name1 up:fullName 'RNA-directed RNA polymerase subunit P3' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'PB2' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the influenza viruses PB2 family.' . ?case4 up:classifiedWith GO:0033650 , GO:0039545 , keyword:1045 , keyword:1090 , keyword:1097 , keyword:1113 , keyword:899 . ?pfs8 up:annotation ?annotation9 . ?annotation9 faldo:begin ?pfsb10 ; faldo:end ?pfse11 ; rdf:type up:Site_Annotation ; rdfs:comment 'Mammalian adaptation' . ?pfsb10 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?pfse11 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?pfs14 up:annotation ?annotation15 . ?annotation15 faldo:begin ?pfsb16 ; faldo:end ?pfse17 ; rdf:type up:Motif_Annotation ; rdfs:comment 'Nuclear localization signal' . ?pfsb16 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse17 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?pfs20 up:annotation ?annotation21 . ?annotation21 faldo:begin ?pfsb22 ; faldo:end ?pfse23 ; rdf:type up:Site_Annotation ; rdfs:comment 'Avian adaptation' . ?pfsb22 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse23 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . _:921178 a rdf:Statement ; up:attribution _:921144 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:921179 a rdf:Statement ; up:attribution _:921145 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:921180 a rdf:Statement ; up:attribution _:921146 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:921181 a rdf:Statement ; up:attribution _:921147 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:921182 a rdf:Statement ; up:attribution _:921148 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1157 . _:921183 a rdf:Statement ; up:attribution _:921149 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1262 . _:921184 a rdf:Statement ; up:attribution _:921150 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1191 . _:921185 a rdf:Statement ; up:attribution _:921151 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1190 . _:921186 a rdf:Statement ; up:attribution _:921152 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1048 . _:921187 a rdf:Statement ; up:attribution _:921153 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:945 . _:921188 a rdf:Statement ; up:attribution _:921154 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1104 . _:921189 a rdf:Statement ; up:attribution _:921155 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:506 . _:921190 a rdf:Statement ; up:attribution _:921156 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:507 . _:921191 a rdf:Statement ; up:attribution _:921157 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1195 . _:921192 a rdf:Statement ; up:attribution _:921158 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:946 . _:921193 a rdf:Statement ; up:attribution _:921159 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0042025 . _:921194 a rdf:Statement ; up:attribution _:921160 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0044423 . _:921195 a rdf:Statement ; up:attribution _:921161 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003723 . _:921196 a rdf:Statement ; up:attribution _:921162 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003968 . _:921197 a rdf:Statement ; up:attribution _:921163 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006370 . _:921198 a rdf:Statement ; up:attribution _:921164 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0075526 . _:921199 a rdf:Statement ; up:attribution _:921165 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0039523 . _:921200 a rdf:Statement ; up:attribution _:921166 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006351 . _:921201 a rdf:Statement ; up:attribution _:921167 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0019083 . _:921202 a rdf:Statement ; up:attribution _:921168 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1090 . _:921203 a rdf:Statement ; up:attribution _:921169 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1097 . _:921204 a rdf:Statement ; up:attribution _:921170 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1113 . _:921205 a rdf:Statement ; up:attribution _:921171 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:899 . _:921206 a rdf:Statement ; up:attribution _:921172 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1045 . _:921207 a rdf:Statement ; up:attribution _:921173 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0039545 . _:921208 a rdf:Statement ; up:attribution _:921174 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0033650 . _:921209 a rdf:Statement ; up:source unirule:MF_04062 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:921210 a rdf:Statement ; up:attribution _:921175 ; rdf:subject ?pfs8 ; rdf:predicate up:annotation ; rdf:object ?annotation9 . _:921211 a rdf:Statement ; up:source unirule:MF_04062 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:921212 a rdf:Statement ; up:attribution _:921176 ; rdf:subject ?pfs14 ; rdf:predicate up:annotation ; rdf:object ?annotation15 . _:921213 a rdf:Statement ; up:source unirule:MF_04062 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . _:921214 a rdf:Statement ; up:attribution _:921177 ; rdf:subject ?pfs20 ; rdf:predicate up:annotation ; rdf:object ?annotation21 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04062 #Rule MF_04062 Created by:? on:2017-03-24 Modified by:Catherine Rivoire on:2025-03-21 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04062 . ?thisOrganism rdfs:subClassOf+ taxon:11308 . BIND(URI(CONCAT(STR(?this), '#MF_04062a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04062a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_04062a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch30 faldo:location ?templateMotifSequenceMatchRegionP0342831 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0342833 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03428MF_0406226 . ?templateMotifSequenceMatchRegionP0342831 faldo:begin ?templateMotifSequenceMatchBeginP0342832 . ?templateMotifSequenceMatchBeginP0342832 faldo:position ?templateMotifSequenceMatchBeginPositionP0342827 ; faldo:reference isoform:P03428-1 . ?templateMotifSequenceProfileAlignmentOperationP0342833 edam:has_input signature:MF_04062 ; rdf:type edam:operation_0300 . ?targetMotifMatch34 faldo:location ?targetMotifMatchRegionMatch35 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0406237 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03428MF_0406228 . ?targetMotifMatchRegionMatch35 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0406236 . ?targetMotifMatchRegionMatchBeginMF_0406236 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0406229 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0406237 edam:has_input signature:MF_04062 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagHostd) . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197911 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03428MF_0406226, 1, (STRLEN(?templateMotifCigarP03428MF_0406226) - STRLEN(REPLACE(?templateMotifCigarP03428MF_0406226, CONCAT('^(?:-*[^-]){', STR(((627 - ?templateMotifSequenceMatchBeginPositionP0342827) + 1)), '}'), '')))), '[a-z]', '')) AS ?step138) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03428MF_0406228, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406228) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03428MF_0406228, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406228) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step138), '}'), '')))), '[^-]', ''))) AS ?step239) . BIND(((?step239 + ?targetMotifMatchRegionMatchBeginPositionMF_0406229) - 1) AS ?thisPositionOn12) . BIND(?thisPositionOn12 AS ?thisPositionOn13) . BIND(?this AS ?pfs1t40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb10) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse11) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'K')) . BIND(URI(CONCAT(STR(?this), '#MF_04062a9')) AS ?annotation9) . BIND(?this AS ?pfs8) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch45 faldo:location ?templateMotifSequenceMatchRegionP0342846 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0342848 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03428MF_0406241 . ?templateMotifSequenceMatchRegionP0342846 faldo:begin ?templateMotifSequenceMatchBeginP0342847 . ?templateMotifSequenceMatchBeginP0342847 faldo:position ?templateMotifSequenceMatchBeginPositionP0342842 ; faldo:reference isoform:P03428-1 . ?templateMotifSequenceProfileAlignmentOperationP0342848 edam:has_input signature:MF_04062 ; rdf:type edam:operation_0300 . ?targetMotifMatch49 faldo:location ?targetMotifMatchRegionMatch50 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0406252 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03428MF_0406243 . ?targetMotifMatchRegionMatch50 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0406251 . ?targetMotifMatchRegionMatchBeginMF_0406251 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0406244 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0406252 edam:has_input signature:MF_04062 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03428MF_0406241, 1, (STRLEN(?templateMotifCigarP03428MF_0406241) - STRLEN(REPLACE(?templateMotifCigarP03428MF_0406241, CONCAT('^(?:-*[^-]){', STR(((736 - ?templateMotifSequenceMatchBeginPositionP0342842) + 1)), '}'), '')))), '[a-z]', '')) AS ?step153) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03428MF_0406243, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406243) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03428MF_0406243, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406243) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step153), '}'), '')))), '[^-]', ''))) AS ?step254) . BIND(((?step254 + ?targetMotifMatchRegionMatchBeginPositionMF_0406244) - 1) AS ?thisPositionOn18) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03428MF_0406241, 1, (STRLEN(?templateMotifCigarP03428MF_0406241) - STRLEN(REPLACE(?templateMotifCigarP03428MF_0406241, CONCAT('^(?:-*[^-]){', STR(((739 - ?templateMotifSequenceMatchBeginPositionP0342842) + 1)), '}'), '')))), '[a-z]', '')) AS ?step155) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03428MF_0406243, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406243) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step155), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03428MF_0406243, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406243) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406243, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step155), '}'), '')))), '[^-]', ''))) AS ?step256) . BIND(((?step256 + ?targetMotifMatchRegionMatchBeginPositionMF_0406244) - 1) AS ?thisPositionOn19) . BIND(?this AS ?pfs2t57) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb16) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse17) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)) = 'KRKR')) . BIND(URI(CONCAT(STR(?this), '#MF_04062a15')) AS ?annotation15) . BIND(?this AS ?pfs14) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch62 faldo:location ?templateMotifSequenceMatchRegionP0342863 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0342865 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP03428MF_0406258 . ?templateMotifSequenceMatchRegionP0342863 faldo:begin ?templateMotifSequenceMatchBeginP0342864 . ?templateMotifSequenceMatchBeginP0342864 faldo:position ?templateMotifSequenceMatchBeginPositionP0342859 ; faldo:reference isoform:P03428-1 . ?templateMotifSequenceProfileAlignmentOperationP0342865 edam:has_input signature:MF_04062 ; rdf:type edam:operation_0300 . ?targetMotifMatch66 faldo:location ?targetMotifMatchRegionMatch67 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0406269 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP03428MF_0406260 . ?targetMotifMatchRegionMatch67 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0406268 . ?targetMotifMatchRegionMatchBeginMF_0406268 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0406261 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0406269 edam:has_input signature:MF_04062 ; rdf:type edam:operation_0300 . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197911 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP03428MF_0406258, 1, (STRLEN(?templateMotifCigarP03428MF_0406258) - STRLEN(REPLACE(?templateMotifCigarP03428MF_0406258, CONCAT('^(?:-*[^-]){', STR(((627 - ?templateMotifSequenceMatchBeginPositionP0342859) + 1)), '}'), '')))), '[a-z]', '')) AS ?step170) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP03428MF_0406260, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406260) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406260, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step170), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP03428MF_0406260, 1, (STRLEN(?targetMotifMatchCigarP03428MF_0406260) - STRLEN(REPLACE(?targetMotifMatchCigarP03428MF_0406260, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step170), '}'), '')))), '[^-]', ''))) AS ?step271) . BIND(((?step271 + ?targetMotifMatchRegionMatchBeginPositionMF_0406261) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs3t72) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_04062a21')) AS ?annotation21) . BIND(?this AS ?pfs20) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag73) . } BIND(IF(BOUND(?tagHostd), ?caseWithTag73, ?UNBOUND_VARIABLE) AS ?case4) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:197911 . })) . BIND(?this AS ?case5) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197911 . BIND(?this AS ?caseWithTag74) . } BIND(IF(BOUND(?tagHostd), ?caseWithTag74, ?UNBOUND_VARIABLE) AS ?case6) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:197911 . BIND(?this AS ?caseWithTag75) . } BIND(IF(BOUND(?tagHostd), ?caseWithTag75, ?UNBOUND_VARIABLE) AS ?case7) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_04062 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_04062#construct |