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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-61 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-85 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-140 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-141 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-120 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-123 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-37 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-122 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-38 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-121 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-125 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-101 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-124 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-100 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-103 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_04088#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_04088#construct-template-126 |
| http://purl.uniprot.org/unirules/MF_04088#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_04088#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_04088#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_04088#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_04088#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_04088#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:944739 up:source unirule:MF_04088 . _:944740 up:source unirule:MF_04088 . _:944741 up:source unirule:MF_04088 . _:944742 up:source unirule:MF_04088 . _:944743 up:source unirule:MF_04088 . _:944744 up:source unirule:MF_04088 . _:944745 up:source unirule:MF_04088 . _:944746 up:source unirule:MF_04088 . _:944747 up:source unirule:MF_04088 . _:944748 up:source unirule:MF_04088 . _:944749 up:source unirule:MF_04088 . _:944750 up:source unirule:MF_04088 . _:944751 up:source unirule:MF_04088 . _:944752 up:source unirule:MF_04088 . _:944753 up:source unirule:MF_04088 . _:944754 up:source unirule:MF_04088 . _:944755 up:source unirule:MF_04088 . _:944756 up:source unirule:MF_04088 . _:944757 up:source unirule:MF_04088 . _:944758 up:source unirule:MF_04088 . _:944759 up:source unirule:MF_04088 . _:944760 up:source unirule:MF_04088 . _:944761 up:source unirule:MF_04088 . _:944762 up:source unirule:MF_04088 . _:944763 up:source unirule:MF_04088 . _:944764 up:source unirule:MF_04088 . _:944765 up:source unirule:MF_04088 . _:944766 up:source unirule:MF_04088 . _:944767 up:source unirule:MF_04088 . ?this up:alternativeName ?name1 , ?name2 ; up:annotation ?annotation3 ; up:classifiedWith GO:0003723 , GO:0030430 , GO:0039548 , GO:0039557 , GO:0044163 , GO:0046872 , keyword:1035 , keyword:1037 , keyword:1090 , keyword:1092 , keyword:1093 , keyword:1113 , keyword:479 , keyword:694 , keyword:899 , keyword:922 , keyword:945 ; up:recommendedName ?name0 . ?name0 up:fullName 'Non-structural protein 1' ; up:shortName 'NSP1' ; rdf:type up:Structured_Name . ?name1 up:fullName 'NCVP2' ; rdf:type up:Structured_Name . ?name2 up:fullName 'Non-structural RNA-binding protein 53' ; up:shortName 'NS53' ; rdf:type up:Structured_Name . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the rotavirus NSP1 family.' . ?case4 up:classifiedWith GO:0085034 , keyword:1100 , keyword:597 . ?pfs6 up:annotation ?annotation7 . ?annotation7 faldo:begin ?pfsb8 ; faldo:end ?pfse9 ; rdf:type up:Motif_Annotation ; rdfs:comment 'IKBKB-like degron (ILD) motif' . ?pfsb8 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?pfse9 faldo:position ?thisPositionOn11 ; rdf:type faldo:ExactPosition . ?pfs12 up:annotation ?annotation13 . ?annotation13 faldo:begin ?pfsb14 ; faldo:end ?pfse15 ; rdf:type up:Region_Annotation ; rdfs:comment 'Zinc-binding domain' . ?pfsb14 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse15 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; rdf:type up:Region_Annotation ; rdfs:comment 'Interaction with host IRF3' . ?pfsb20 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfs24 up:annotation ?annotation25 . ?annotation25 faldo:begin ?pfsb26 ; faldo:end ?pfse27 ; rdf:type up:Region_Annotation ; rdfs:comment 'RNA-binding' . ?pfsb26 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?pfse27 faldo:position ?thisPositionOn29 ; rdf:type faldo:ExactPosition . ?pfs30 up:annotation ?annotation31 . ?annotation31 faldo:begin ?pfsb32 ; faldo:end ?pfse33 ; rdf:type up:Region_Annotation ; rdfs:comment 'Important for cytoskeleton localization' . ?pfsb32 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?pfse33 faldo:position ?thisPositionOn35 ; rdf:type faldo:ExactPosition . _:944768 a rdf:Statement ; up:attribution _:944739 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:944769 a rdf:Statement ; up:attribution _:944740 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:944770 a rdf:Statement ; up:attribution _:944741 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name2 . _:944771 a rdf:Statement ; up:attribution _:944742 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:944772 a rdf:Statement ; up:attribution _:944743 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1035 . _:944773 a rdf:Statement ; up:attribution _:944744 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1037 . _:944774 a rdf:Statement ; up:attribution _:944745 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:945 . _:944775 a rdf:Statement ; up:attribution _:944746 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1090 . _:944776 a rdf:Statement ; up:attribution _:944747 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1092 . _:944777 a rdf:Statement ; up:attribution _:944748 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1093 . _:944778 a rdf:Statement ; up:attribution _:944749 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:1113 . _:944779 a rdf:Statement ; up:attribution _:944750 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:922 . _:944780 a rdf:Statement ; up:attribution _:944751 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:944781 a rdf:Statement ; up:attribution _:944752 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:944782 a rdf:Statement ; up:attribution _:944753 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:899 . _:944783 a rdf:Statement ; up:attribution _:944754 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0030430 . _:944784 a rdf:Statement ; up:attribution _:944755 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0044163 . _:944785 a rdf:Statement ; up:attribution _:944756 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0046872 . _:944786 a rdf:Statement ; up:attribution _:944757 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0003723 . _:944787 a rdf:Statement ; up:attribution _:944758 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0039548 . _:944788 a rdf:Statement ; up:attribution _:944759 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0039557 . _:944789 a rdf:Statement ; up:attribution _:944760 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:597 . _:944790 a rdf:Statement ; up:attribution _:944761 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object keyword:1100 . _:944791 a rdf:Statement ; up:attribution _:944762 ; rdf:subject ?case4 ; rdf:predicate up:classifiedWith ; rdf:object GO:0085034 . _:944792 a rdf:Statement ; up:source unirule:MF_04088 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:944793 a rdf:Statement ; up:attribution _:944763 ; rdf:subject ?pfs6 ; rdf:predicate up:annotation ; rdf:object ?annotation7 . _:944794 a rdf:Statement ; up:source unirule:MF_04088 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:944795 a rdf:Statement ; up:attribution _:944764 ; rdf:subject ?pfs12 ; rdf:predicate up:annotation ; rdf:object ?annotation13 . _:944796 a rdf:Statement ; up:source unirule:MF_04088 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:944797 a rdf:Statement ; up:attribution _:944765 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:944798 a rdf:Statement ; up:source unirule:MF_04088 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:944799 a rdf:Statement ; up:attribution _:944766 ; rdf:subject ?pfs24 ; rdf:predicate up:annotation ; rdf:object ?annotation25 . _:944800 a rdf:Statement ; up:source unirule:MF_04088 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . _:944801 a rdf:Statement ; up:attribution _:944767 ; rdf:subject ?pfs30 ; rdf:predicate up:annotation ; rdf:object ?annotation31 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04088 #Rule MF_04088 Created by:? on:2018-02-08 Modified by:Catherine Rivoire on:2024-03-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04088 . ?thisOrganism rdfs:subClassOf+ taxon:10912 . BIND(URI(CONCAT(STR(?this), '#MF_04088a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04088a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_04088a2')) AS ?name2) . BIND(URI(CONCAT(STR(?this), '#MF_04088a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch40 faldo:location ?templateMotifSequenceMatchRegionQ8494041 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8494043 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ84940MF_0408836 . ?templateMotifSequenceMatchRegionQ8494041 faldo:begin ?templateMotifSequenceMatchBeginQ8494042 . ?templateMotifSequenceMatchBeginQ8494042 faldo:position ?templateMotifSequenceMatchBeginPositionQ8494037 ; faldo:reference isoform:Q84940-1 . ?templateMotifSequenceProfileAlignmentOperationQ8494043 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . ?targetMotifMatch44 faldo:location ?targetMotifMatchRegionMatch45 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0408847 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ84940MF_0408838 . ?targetMotifMatchRegionMatch45 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0408846 . ?targetMotifMatchRegionMatchBeginMF_0408846 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0408839 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0408847 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagILD) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ84940MF_0408836, 1, (STRLEN(?templateMotifCigarQ84940MF_0408836) - STRLEN(REPLACE(?templateMotifCigarQ84940MF_0408836, CONCAT('^(?:-*[^-]){', STR(((479 - ?templateMotifSequenceMatchBeginPositionQ8494037) + 1)), '}'), '')))), '[a-z]', '')) AS ?step148) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ84940MF_0408838, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408838) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408838, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ84940MF_0408838, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408838) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408838, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step148), '}'), '')))), '[^-]', ''))) AS ?step249) . BIND(((?step249 + ?targetMotifMatchRegionMatchBeginPositionMF_0408839) - 1) AS ?thisPositionOn10) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ84940MF_0408836, 1, (STRLEN(?templateMotifCigarQ84940MF_0408836) - STRLEN(REPLACE(?templateMotifCigarQ84940MF_0408836, CONCAT('^(?:-*[^-]){', STR(((483 - ?templateMotifSequenceMatchBeginPositionQ8494037) + 1)), '}'), '')))), '[a-z]', '')) AS ?step150) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ84940MF_0408838, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408838) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408838, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ84940MF_0408838, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408838) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408838, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step150), '}'), '')))), '[^-]', ''))) AS ?step251) . BIND(((?step251 + ?targetMotifMatchRegionMatchBeginPositionMF_0408839) - 1) AS ?thisPositionOn11) . BIND(?this AS ?pfs1t52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) . FILTER (REGEX('DSG[ARNDCQEGHILKMFPSTWYVBZJUOX]S', SUBSTR(?thisSequenceValue, ?thisPositionOn10, (?thisPositionOn11 - ?thisPositionOn10)))) . BIND(URI(CONCAT(STR(?this), '#MF_04088a7')) AS ?annotation7) . BIND(?this AS ?pfs6) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch57 faldo:location ?templateMotifSequenceMatchRegionQ8494058 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8494060 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ84940MF_0408853 . ?templateMotifSequenceMatchRegionQ8494058 faldo:begin ?templateMotifSequenceMatchBeginQ8494059 . ?templateMotifSequenceMatchBeginQ8494059 faldo:position ?templateMotifSequenceMatchBeginPositionQ8494054 ; faldo:reference isoform:Q84940-1 . ?templateMotifSequenceProfileAlignmentOperationQ8494060 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . ?targetMotifMatch61 faldo:location ?targetMotifMatchRegionMatch62 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0408864 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ84940MF_0408855 . ?targetMotifMatchRegionMatch62 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0408863 . ?targetMotifMatchRegionMatchBeginMF_0408863 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0408856 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0408864 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ84940MF_0408853, 1, (STRLEN(?templateMotifCigarQ84940MF_0408853) - STRLEN(REPLACE(?templateMotifCigarQ84940MF_0408853, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionQ8494054) + 1)), '}'), '')))), '[a-z]', '')) AS ?step165) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ84940MF_0408855, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408855) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408855, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ84940MF_0408855, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408855) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408855, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step165), '}'), '')))), '[^-]', ''))) AS ?step266) . BIND(((?step266 + ?targetMotifMatchRegionMatchBeginPositionMF_0408856) - 1) AS ?thisPositionOn16) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ84940MF_0408853, 1, (STRLEN(?templateMotifCigarQ84940MF_0408853) - STRLEN(REPLACE(?templateMotifCigarQ84940MF_0408853, CONCAT('^(?:-*[^-]){', STR(((79 - ?templateMotifSequenceMatchBeginPositionQ8494054) + 1)), '}'), '')))), '[a-z]', '')) AS ?step167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ84940MF_0408855, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408855) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408855, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ84940MF_0408855, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408855) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408855, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step167), '}'), '')))), '[^-]', ''))) AS ?step268) . BIND(((?step268 + ?targetMotifMatchRegionMatchBeginPositionMF_0408856) - 1) AS ?thisPositionOn17) . BIND(?this AS ?pfs2t69) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) . FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) . BIND(URI(CONCAT(STR(?this), '#MF_04088a13')) AS ?annotation13) . BIND(?this AS ?pfs12) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch74 faldo:location ?templateMotifSequenceMatchRegionQ8494075 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8494077 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ84940MF_0408870 . ?templateMotifSequenceMatchRegionQ8494075 faldo:begin ?templateMotifSequenceMatchBeginQ8494076 . ?templateMotifSequenceMatchBeginQ8494076 faldo:position ?templateMotifSequenceMatchBeginPositionQ8494071 ; faldo:reference isoform:Q84940-1 . ?templateMotifSequenceProfileAlignmentOperationQ8494077 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . ?targetMotifMatch78 faldo:location ?targetMotifMatchRegionMatch79 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0408881 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ84940MF_0408872 . ?targetMotifMatchRegionMatch79 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0408880 . ?targetMotifMatchRegionMatchBeginMF_0408880 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0408873 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0408881 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ84940MF_0408870, 1, (STRLEN(?templateMotifCigarQ84940MF_0408870) - STRLEN(REPLACE(?templateMotifCigarQ84940MF_0408870, CONCAT('^(?:-*[^-]){', STR(((317 - ?templateMotifSequenceMatchBeginPositionQ8494071) + 1)), '}'), '')))), '[a-z]', '')) AS ?step182) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ84940MF_0408872, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408872) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408872, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ84940MF_0408872, 1, (STRLEN(?targetMotifMatchCigarQ84940MF_0408872) - STRLEN(REPLACE(?targetMotifMatchCigarQ84940MF_0408872, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step182), '}'), '')))), '[^-]', ''))) AS ?step283) . BIND(((?step283 + ?targetMotifMatchRegionMatchBeginPositionMF_0408873) - 1) AS ?thisPositionOn22) . BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn23) . BIND(?this AS ?pfs2t84) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) . FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) . BIND(URI(CONCAT(STR(?this), '#MF_04088a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch89 faldo:location ?templateMotifSequenceMatchRegionQ99FX590 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ99FX592 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ99FX5MF_0408885 . ?templateMotifSequenceMatchRegionQ99FX590 faldo:begin ?templateMotifSequenceMatchBeginQ99FX591 . ?templateMotifSequenceMatchBeginQ99FX591 faldo:position ?templateMotifSequenceMatchBeginPositionQ99FX586 ; faldo:reference isoform:Q99FX5-1 . ?templateMotifSequenceProfileAlignmentOperationQ99FX592 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . ?targetMotifMatch93 faldo:location ?targetMotifMatchRegionMatch94 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0408896 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ99FX5MF_0408887 . ?targetMotifMatchRegionMatch94 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0408895 . ?targetMotifMatchRegionMatchBeginMF_0408895 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0408888 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0408896 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ99FX5MF_0408885, 1, (STRLEN(?templateMotifCigarQ99FX5MF_0408885) - STRLEN(REPLACE(?templateMotifCigarQ99FX5MF_0408885, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionQ99FX586) + 1)), '}'), '')))), '[a-z]', '')) AS ?step197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ99FX5MF_0408887, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_0408887) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_0408887, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ99FX5MF_0408887, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_0408887) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_0408887, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), '')))), '[^-]', ''))) AS ?step298) . BIND(((?step298 + ?targetMotifMatchRegionMatchBeginPositionMF_0408888) - 1) AS ?thisPositionOn28) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ99FX5MF_0408885, 1, (STRLEN(?templateMotifCigarQ99FX5MF_0408885) - STRLEN(REPLACE(?templateMotifCigarQ99FX5MF_0408885, CONCAT('^(?:-*[^-]){', STR(((81 - ?templateMotifSequenceMatchBeginPositionQ99FX586) + 1)), '}'), '')))), '[a-z]', '')) AS ?step199) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ99FX5MF_0408887, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_0408887) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_0408887, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ99FX5MF_0408887, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_0408887) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_0408887, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), '')))), '[^-]', ''))) AS ?step2100) . BIND(((?step2100 + ?targetMotifMatchRegionMatchBeginPositionMF_0408888) - 1) AS ?thisPositionOn29) . BIND(?this AS ?pfs3t101) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) . FILTER ((BOUND(?thisPositionOn28) && BOUND(?thisPositionOn29))) . BIND(URI(CONCAT(STR(?this), '#MF_04088a25')) AS ?annotation25) . BIND(?this AS ?pfs24) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch106 faldo:location ?templateMotifSequenceMatchRegionQ99FX5107 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ99FX5109 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ99FX5MF_04088102 . ?templateMotifSequenceMatchRegionQ99FX5107 faldo:begin ?templateMotifSequenceMatchBeginQ99FX5108 . ?templateMotifSequenceMatchBeginQ99FX5108 faldo:position ?templateMotifSequenceMatchBeginPositionQ99FX5103 ; faldo:reference isoform:Q99FX5-1 . ?templateMotifSequenceProfileAlignmentOperationQ99FX5109 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . ?targetMotifMatch110 faldo:location ?targetMotifMatchRegionMatch111 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_04088113 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ99FX5MF_04088104 . ?targetMotifMatchRegionMatch111 faldo:begin ?targetMotifMatchRegionMatchBeginMF_04088112 . ?targetMotifMatchRegionMatchBeginMF_04088112 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_04088105 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_04088113 edam:has_input signature:MF_04088 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ99FX5MF_04088102, 1, (STRLEN(?templateMotifCigarQ99FX5MF_04088102) - STRLEN(REPLACE(?templateMotifCigarQ99FX5MF_04088102, CONCAT('^(?:-*[^-]){', STR(((82 - ?templateMotifSequenceMatchBeginPositionQ99FX5103) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1114) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ99FX5MF_04088104, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_04088104) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_04088104, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1114), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ99FX5MF_04088104, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_04088104) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_04088104, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1114), '}'), '')))), '[^-]', ''))) AS ?step2115) . BIND(((?step2115 + ?targetMotifMatchRegionMatchBeginPositionMF_04088105) - 1) AS ?thisPositionOn34) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ99FX5MF_04088102, 1, (STRLEN(?templateMotifCigarQ99FX5MF_04088102) - STRLEN(REPLACE(?templateMotifCigarQ99FX5MF_04088102, CONCAT('^(?:-*[^-]){', STR(((177 - ?templateMotifSequenceMatchBeginPositionQ99FX5103) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ99FX5MF_04088104, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_04088104) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_04088104, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ99FX5MF_04088104, 1, (STRLEN(?targetMotifMatchCigarQ99FX5MF_04088104) - STRLEN(REPLACE(?targetMotifMatchCigarQ99FX5MF_04088104, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) . BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_04088105) - 1) AS ?thisPositionOn35) . BIND(?this AS ?pfs3t118) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) . FILTER ((BOUND(?thisPositionOn34) && BOUND(?thisPositionOn35))) . BIND(URI(CONCAT(STR(?this), '#MF_04088a31')) AS ?annotation31) . BIND(?this AS ?pfs30) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag119) . } BIND(IF(BOUND(?tagILD), ?caseWithTag119, ?UNBOUND_VARIABLE) AS ?case4) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag120) . } BIND(IF(BOUND(?tagILD), ?caseWithTag120, ?UNBOUND_VARIABLE) AS ?case5) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_04088 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_04088#construct |