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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-124 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-94 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-149 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-101 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-125 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-91 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-126 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-92 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_00033#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00033#construct-template-103 |
| http://purl.uniprot.org/unirules/MF_00033#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00033#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00033#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00033#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00033#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00033#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:13060 up:source unirule:MF_00033 .
_:13061 up:source unirule:MF_00033 .
_:13062 up:source unirule:MF_00033 .
_:13063 up:source unirule:MF_00033 .
_:13064 up:source unirule:MF_00033 .
_:13065 up:source unirule:MF_00033 .
_:13066 up:source unirule:MF_00033 .
_:13067 up:source unirule:MF_00033 .
_:13068 up:source unirule:MF_00033 .
_:13069 up:source unirule:MF_00033 .
_:13070 up:source unirule:MF_00033 .
_:13071 up:source unirule:MF_00033 .
_:13072 up:source unirule:MF_00033 .
_:13073 up:source unirule:MF_00033 .
_:13074 up:source unirule:MF_00033 .
_:13075 up:source unirule:MF_00033 .
_:13076 up:source unirule:MF_00033 .
_:13077 up:source unirule:MF_00033 .
_:13078 up:source unirule:MF_00033 .
_:13079 up:source unirule:MF_00033 .
_:13080 up:source unirule:MF_00033 .
_:13081 up:source unirule:MF_00033 .
_:13082 up:source unirule:MF_00033 .
_:13083 up:source unirule:MF_00033 .
_:13084 up:source unirule:MF_00033 .
_:13085 up:source unirule:MF_00033 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation5 ;
up:classifiedWith GO:0005886 ,
GO:0009252 ,
GO:0050511 ,
keyword:1003 ,
keyword:131 ,
keyword:132 ,
keyword:133 ,
keyword:328 ,
keyword:472 ,
keyword:573 ,
keyword:808 ,
keyword:961 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.4.1.227' ;
up:fullName 'UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'murG' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).' .
?annotation4 a up:Pathway_Annotation ;
rdfs:comment 'Cell wall biogenesis; peptidoglycan biosynthesis.' .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the glycosyltransferase 28 family. MurG subfamily.' .
?case6 up:classifiedWith keyword:997 .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
up:ligand ?ligand14 ;
rdf:type up:Binding_Site_Annotation .
?pfsb12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?ligand14 rdfs:subClassOf chebi:57705 .
?pfs17 up:annotation ?annotation18 .
?annotation18 faldo:begin ?pfsb19 ;
faldo:end ?pfse20 ;
up:ligand ?ligand21 ;
rdf:type up:Binding_Site_Annotation .
?pfsb19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfse20 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?ligand21 rdfs:subClassOf chebi:57705 .
?pfs24 up:annotation ?annotation25 .
?annotation25 faldo:begin ?pfsb26 ;
faldo:end ?pfse27 ;
up:ligand ?ligand28 ;
rdf:type up:Binding_Site_Annotation .
?pfsb26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?pfse27 faldo:position ?thisPositionOn30 ;
rdf:type faldo:ExactPosition .
?ligand28 rdfs:subClassOf chebi:57705 .
?pfs31 up:annotation ?annotation32 .
?annotation32 faldo:begin ?pfsb33 ;
faldo:end ?pfse34 ;
up:ligand ?ligand35 ;
rdf:type up:Binding_Site_Annotation .
?pfsb33 faldo:position ?thisPositionOn36 ;
rdf:type faldo:ExactPosition .
?pfse34 faldo:position ?thisPositionOn37 ;
rdf:type faldo:ExactPosition .
?ligand35 rdfs:subClassOf chebi:57705 .
?pfs38 up:annotation ?annotation39 .
?annotation39 faldo:begin ?pfsb40 ;
faldo:end ?pfse41 ;
up:ligand ?ligand42 ;
rdf:type up:Binding_Site_Annotation .
?pfsb40 faldo:position ?thisPositionOn43 ;
rdf:type faldo:ExactPosition .
?pfse41 faldo:position ?thisPositionOn44 ;
rdf:type faldo:ExactPosition .
?ligand42 rdfs:subClassOf chebi:57705 .
?pfs45 up:annotation ?annotation46 .
?annotation46 faldo:begin ?pfsb47 ;
faldo:end ?pfse48 ;
up:ligand ?ligand49 ;
rdf:type up:Binding_Site_Annotation .
?pfsb47 faldo:position ?thisPositionOn50 ;
rdf:type faldo:ExactPosition .
?pfse48 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?ligand49 rdfs:subClassOf chebi:57705 .
?pfs52 up:annotation ?annotation53 .
?annotation53 faldo:begin ?pfsb54 ;
faldo:end ?pfse55 ;
up:ligand ?ligand56 ;
rdf:type up:Binding_Site_Annotation .
?pfsb54 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?pfse55 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?ligand56 rdfs:subClassOf chebi:57705 .
_:13086 a rdf:Statement ;
up:attribution _:13060 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:13087 a rdf:Statement ;
up:attribution _:13061 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:13088 a rdf:Statement ;
up:attribution _:13062 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:13089 a rdf:Statement ;
up:attribution _:13063 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:13090 a rdf:Statement ;
up:attribution _:13064 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:13091 a rdf:Statement ;
up:attribution _:13065 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:13092 a rdf:Statement ;
up:attribution _:13066 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:131 .
_:13093 a rdf:Statement ;
up:attribution _:13067 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:132 .
_:13094 a rdf:Statement ;
up:attribution _:13068 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:13095 a rdf:Statement ;
up:attribution _:13069 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:133 .
_:13096 a rdf:Statement ;
up:attribution _:13070 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:961 .
_:13097 a rdf:Statement ;
up:attribution _:13071 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:328 .
_:13098 a rdf:Statement ;
up:attribution _:13072 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:13099 a rdf:Statement ;
up:attribution _:13073 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:573 .
_:13100 a rdf:Statement ;
up:attribution _:13074 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:13101 a rdf:Statement ;
up:attribution _:13075 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0050511 .
_:13102 a rdf:Statement ;
up:attribution _:13076 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009252 .
_:13103 a rdf:Statement ;
up:attribution _:13077 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:13104 a rdf:Statement ;
up:attribution _:13078 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:13105 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:13106 a rdf:Statement ;
up:attribution _:13079 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:13107 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs17 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:13108 a rdf:Statement ;
up:attribution _:13080 ;
rdf:subject ?pfs17 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:13109 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs24 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:13110 a rdf:Statement ;
up:attribution _:13081 ;
rdf:subject ?pfs24 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:13111 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs31 ;
rdf:predicate up:annotation ;
rdf:object ?annotation32 .
_:13112 a rdf:Statement ;
up:attribution _:13082 ;
rdf:subject ?pfs31 ;
rdf:predicate up:annotation ;
rdf:object ?annotation32 .
_:13113 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs38 ;
rdf:predicate up:annotation ;
rdf:object ?annotation39 .
_:13114 a rdf:Statement ;
up:attribution _:13083 ;
rdf:subject ?pfs38 ;
rdf:predicate up:annotation ;
rdf:object ?annotation39 .
_:13115 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs45 ;
rdf:predicate up:annotation ;
rdf:object ?annotation46 .
_:13116 a rdf:Statement ;
up:attribution _:13084 ;
rdf:subject ?pfs45 ;
rdf:predicate up:annotation ;
rdf:object ?annotation46 .
_:13117 a rdf:Statement ;
up:source unirule:MF_00033 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:13118 a rdf:Statement ;
up:attribution _:13085 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00033
#Rule MF_00033 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-09-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00033 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00033a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch63 faldo:location ?templateMotifSequenceMatchRegionQ9HW0164 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW0166 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_0003359 .
?templateMotifSequenceMatchRegionQ9HW0164 faldo:begin ?templateMotifSequenceMatchBeginQ9HW0165 .
?templateMotifSequenceMatchBeginQ9HW0165 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW0160 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW0166 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch67 faldo:location ?targetMotifMatchRegionMatch68 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0003370 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_0003361 .
?targetMotifMatchRegionMatch68 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0003369 .
?targetMotifMatchRegionMatchBeginMF_0003369 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0003362 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0003370 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_0003359, 1, (STRLEN(?templateMotifCigarQ9HW01MF_0003359) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_0003359, CONCAT('^(?:-*[^-]){', STR(((12 - ?templateMotifSequenceMatchBeginPositionQ9HW0160) + 1)), '}'), '')))), '[a-z]', '')) AS ?step171) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003361, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003361) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003361, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step171), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003361, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003361) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003361, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step171), '}'), '')))), '[^-]', ''))) AS ?step272) .
BIND(((?step272 + ?targetMotifMatchRegionMatchBeginPositionMF_0003362) - 1) AS ?thisPositionOn15) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_0003359, 1, (STRLEN(?templateMotifCigarQ9HW01MF_0003359) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_0003359, CONCAT('^(?:-*[^-]){', STR(((14 - ?templateMotifSequenceMatchBeginPositionQ9HW0160) + 1)), '}'), '')))), '[a-z]', '')) AS ?step173) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003361, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003361) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003361, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step173), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003361, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003361) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003361, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step173), '}'), '')))), '[^-]', ''))) AS ?step274) .
BIND(((?step274 + ?targetMotifMatchRegionMatchBeginPositionMF_0003362) - 1) AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t75) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) .
FILTER (REGEX('[TS][GA]G', SUBSTR(?thisSequenceValue, ?thisPositionOn15, (?thisPositionOn16 - ?thisPositionOn15)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch80 faldo:location ?templateMotifSequenceMatchRegionQ9HW0181 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW0183 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_0003376 .
?templateMotifSequenceMatchRegionQ9HW0181 faldo:begin ?templateMotifSequenceMatchBeginQ9HW0182 .
?templateMotifSequenceMatchBeginQ9HW0182 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW0177 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW0183 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch84 faldo:location ?targetMotifMatchRegionMatch85 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0003387 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_0003378 .
?targetMotifMatchRegionMatch85 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0003386 .
?targetMotifMatchRegionMatchBeginMF_0003386 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0003379 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0003387 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_0003376, 1, (STRLEN(?templateMotifCigarQ9HW01MF_0003376) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_0003376, CONCAT('^(?:-*[^-]){', STR(((262 - ?templateMotifSequenceMatchBeginPositionQ9HW0177) + 1)), '}'), '')))), '[a-z]', '')) AS ?step188) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003378, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003378) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step188), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003378, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003378) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step188), '}'), '')))), '[^-]', ''))) AS ?step289) .
BIND(((?step289 + ?targetMotifMatchRegionMatchBeginPositionMF_0003379) - 1) AS ?thisPositionOn22) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_0003376, 1, (STRLEN(?templateMotifCigarQ9HW01MF_0003376) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_0003376, CONCAT('^(?:-*[^-]){', STR(((267 - ?templateMotifSequenceMatchBeginPositionQ9HW0177) + 1)), '}'), '')))), '[a-z]', '')) AS ?step190) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003378, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003378) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step190), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003378, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003378) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step190), '}'), '')))), '[^-]', ''))) AS ?step291) .
BIND(((?step291 + ?targetMotifMatchRegionMatchBeginPositionMF_0003379) - 1) AS ?thisPositionOn23) .
BIND(?this AS ?pfs1t92) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) .
FILTER (REGEX('[AG]L[TS]V[ARNDCQEGHILKMFPSTWYVBZJUOX][ED]', SUBSTR(?thisSequenceValue, ?thisPositionOn22, (?thisPositionOn23 - ?thisPositionOn22)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a18')) AS ?annotation18) .
BIND(?this AS ?pfs17) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch97 faldo:location ?templateMotifSequenceMatchRegionQ9HW0198 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW01100 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_0003393 .
?templateMotifSequenceMatchRegionQ9HW0198 faldo:begin ?templateMotifSequenceMatchBeginQ9HW0199 .
?templateMotifSequenceMatchBeginQ9HW0199 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW0194 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW01100 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch101 faldo:location ?targetMotifMatchRegionMatch102 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00033104 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_0003395 .
?targetMotifMatchRegionMatch102 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00033103 .
?targetMotifMatchRegionMatchBeginMF_00033103 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0003396 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00033104 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_0003393, 1, (STRLEN(?templateMotifCigarQ9HW01MF_0003393) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_0003393, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionQ9HW0194) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1105) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003395, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003395) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003395, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_0003395, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_0003395) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_0003395, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), '')))), '[^-]', ''))) AS ?step2106) .
BIND(((?step2106 + ?targetMotifMatchRegionMatchBeginPositionMF_0003396) - 1) AS ?thisPositionOn29) .
BIND(?thisPositionOn29 AS ?thisPositionOn30) .
BIND(?this AS ?pfs1t107) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfsb26) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfse27) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn29, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a25')) AS ?annotation25) .
BIND(?this AS ?pfs24) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch112 faldo:location ?templateMotifSequenceMatchRegionQ9HW01113 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW01115 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_00033108 .
?templateMotifSequenceMatchRegionQ9HW01113 faldo:begin ?templateMotifSequenceMatchBeginQ9HW01114 .
?templateMotifSequenceMatchBeginQ9HW01114 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW01109 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW01115 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch116 faldo:location ?targetMotifMatchRegionMatch117 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00033119 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_00033110 .
?targetMotifMatchRegionMatch117 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00033118 .
?targetMotifMatchRegionMatchBeginMF_00033118 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00033111 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00033119 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_00033108, 1, (STRLEN(?templateMotifCigarQ9HW01MF_00033108) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_00033108, CONCAT('^(?:-*[^-]){', STR(((163 - ?templateMotifSequenceMatchBeginPositionQ9HW01109) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1120) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033110, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033110) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033110, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1120), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033110, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033110) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033110, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1120), '}'), '')))), '[^-]', ''))) AS ?step2121) .
BIND(((?step2121 + ?targetMotifMatchRegionMatchBeginPositionMF_00033111) - 1) AS ?thisPositionOn36) .
BIND(?thisPositionOn36 AS ?thisPositionOn37) .
BIND(?this AS ?pfs1t122) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a32')) AS ?annotation32) .
BIND(?this AS ?pfs31) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch127 faldo:location ?templateMotifSequenceMatchRegionQ9HW01128 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW01130 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_00033123 .
?templateMotifSequenceMatchRegionQ9HW01128 faldo:begin ?templateMotifSequenceMatchBeginQ9HW01129 .
?templateMotifSequenceMatchBeginQ9HW01129 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW01124 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW01130 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch131 faldo:location ?targetMotifMatchRegionMatch132 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00033134 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_00033125 .
?targetMotifMatchRegionMatch132 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00033133 .
?targetMotifMatchRegionMatchBeginMF_00033133 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00033126 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00033134 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_00033123, 1, (STRLEN(?templateMotifCigarQ9HW01MF_00033123) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_00033123, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionQ9HW01124) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1135) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033125, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033125) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033125, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033125) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), '')))), '[^-]', ''))) AS ?step2136) .
BIND(((?step2136 + ?targetMotifMatchRegionMatchBeginPositionMF_00033126) - 1) AS ?thisPositionOn43) .
BIND(?thisPositionOn43 AS ?thisPositionOn44) .
BIND(?this AS ?pfs1t137) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfsb40) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfse41) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn43, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a39')) AS ?annotation39) .
BIND(?this AS ?pfs38) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch142 faldo:location ?templateMotifSequenceMatchRegionQ9HW01143 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW01145 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_00033138 .
?templateMotifSequenceMatchRegionQ9HW01143 faldo:begin ?templateMotifSequenceMatchBeginQ9HW01144 .
?templateMotifSequenceMatchBeginQ9HW01144 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW01139 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW01145 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch146 faldo:location ?targetMotifMatchRegionMatch147 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00033149 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_00033140 .
?targetMotifMatchRegionMatch147 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00033148 .
?targetMotifMatchRegionMatchBeginMF_00033148 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00033141 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00033149 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_00033138, 1, (STRLEN(?templateMotifCigarQ9HW01MF_00033138) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_00033138, CONCAT('^(?:-*[^-]){', STR(((243 - ?templateMotifSequenceMatchBeginPositionQ9HW01139) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1150) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033140, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033140) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033140, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033140) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033140, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1150), '}'), '')))), '[^-]', ''))) AS ?step2151) .
BIND(((?step2151 + ?targetMotifMatchRegionMatchBeginPositionMF_00033141) - 1) AS ?thisPositionOn50) .
BIND(?thisPositionOn50 AS ?thisPositionOn51) .
BIND(?this AS ?pfs1t152) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb47) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse48) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn50, 1) = 'I')) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a46')) AS ?annotation46) .
BIND(?this AS ?pfs45) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch157 faldo:location ?templateMotifSequenceMatchRegionQ9HW01158 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9HW01160 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9HW01MF_00033153 .
?templateMotifSequenceMatchRegionQ9HW01158 faldo:begin ?templateMotifSequenceMatchBeginQ9HW01159 .
?templateMotifSequenceMatchBeginQ9HW01159 faldo:position ?templateMotifSequenceMatchBeginPositionQ9HW01154 ;
faldo:reference isoform:Q9HW01-1 .
?templateMotifSequenceProfileAlignmentOperationQ9HW01160 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
?targetMotifMatch161 faldo:location ?targetMotifMatchRegionMatch162 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00033164 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9HW01MF_00033155 .
?targetMotifMatchRegionMatch162 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00033163 .
?targetMotifMatchRegionMatchBeginMF_00033163 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00033156 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00033164 edam:has_input signature:MF_00033 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9HW01MF_00033153, 1, (STRLEN(?templateMotifCigarQ9HW01MF_00033153) - STRLEN(REPLACE(?templateMotifCigarQ9HW01MF_00033153, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionQ9HW01154) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1165) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033155, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033155) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033155, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9HW01MF_00033155, 1, (STRLEN(?targetMotifMatchCigarQ9HW01MF_00033155) - STRLEN(REPLACE(?targetMotifMatchCigarQ9HW01MF_00033155, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), '')))), '[^-]', ''))) AS ?step2166) .
BIND(((?step2166 + ?targetMotifMatchRegionMatchBeginPositionMF_00033156) - 1) AS ?thisPositionOn57) .
BIND(?thisPositionOn57 AS ?thisPositionOn58) .
BIND(?this AS ?pfs1t167) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'Q')) .
BIND(URI(CONCAT(STR(?this), '#MF_00033a53')) AS ?annotation53) .
BIND(?this AS ?pfs52) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome |
| http://purl.uniprot.org/unirules/MF_00033 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00033#construct |