| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-59 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-124 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-100 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-148 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-125 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-101 |
| http://purl.uniprot.org/unirules/MF_00422#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00422#construct-template-149 |
| http://purl.uniprot.org/unirules/MF_00422#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00422#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00422#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00422#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00422#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00422#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:166776 up:source unirule:MF_00422 .
_:166777 up:source unirule:MF_00422 .
_:166778 up:source unirule:MF_00422 .
_:166779 up:source unirule:MF_00422 .
_:166780 up:source unirule:MF_00422 .
_:166781 up:source unirule:MF_00422 .
_:166782 up:source unirule:MF_00422 .
_:166783 up:source unirule:MF_00422 .
_:166784 up:source unirule:MF_00422 .
_:166785 up:source unirule:MF_00422 .
_:166786 up:source unirule:MF_00422 .
_:166787 up:source unirule:MF_00422 .
_:166788 up:source unirule:MF_00422 .
_:166789 up:source unirule:MF_00422 .
_:166790 up:source unirule:MF_00422 .
_:166791 up:source unirule:MF_00422 .
_:166792 up:source unirule:MF_00422 .
_:166793 up:source unirule:MF_00422 .
_:166794 up:source unirule:MF_00422 .
_:166795 up:source unirule:MF_00422 .
_:166796 up:source unirule:MF_00422 .
_:166797 up:source unirule:MF_00422 .
_:166798 up:source unirule:MF_00422 .
_:166799 up:source unirule:MF_00422 .
_:166800 up:source unirule:MF_00422 .
_:166801 up:source unirule:MF_00422 .
_:166802 up:source unirule:MF_00422 .
_:166803 up:source unirule:MF_00422 .
_:166804 up:source unirule:MF_00422 .
_:166805 up:source unirule:MF_00422 .
_:166806 up:source unirule:MF_00422 .
_:166807 up:source unirule:MF_00422 .
_:166808 up:source unirule:MF_00422 .
_:166809 up:source unirule:MF_00422 .
_:166810 up:source unirule:MF_00422 .
_:166811 up:source unirule:MF_00422 .
_:166812 up:source unirule:MF_00422 .
_:166813 up:source unirule:MF_00422 .
_:166814 up:source unirule:MF_00422 .
?this up:annotation ?annotation1 ,
?annotation2 ;
up:classifiedWith GO:0005886 ,
GO:0006605 ,
GO:0008320 ,
GO:0009306 ,
GO:0065002 ,
keyword:1133 ,
keyword:472 ,
keyword:653 ,
keyword:811 ,
keyword:812 ,
keyword:813 .
?gene0 skos:prefLabel 'secE' .
?annotation1 a up:Function_Annotation ;
rdfs:comment 'Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.' .
?annotation2 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the SecE/SEC61-gamma family.' .
?case4 up:classifiedWith GO:0043952 .
?case5 up:classifiedWith keyword:1003 ,
keyword:997 .
?case6 up:classifiedWith GO:0042651 ,
keyword:1003 ,
keyword:793 ,
keyword:997 .
?case7 up:classifiedWith keyword:1003 ,
keyword:997 .
?case8 up:classifiedWith keyword:1003 .
?sam9 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane10 faldo:begin ?transmembraneb11 ;
faldo:end ?transmembranee12 .
?transmembraneb11 faldo:position ?transmembranebp13 .
?transmembranee12 faldo:position ?transmembraneep14 .
?keyword15 up:range ?transmembrane10 .
?keyword16 up:range ?transmembrane10 .
?keyword17 up:range ?transmembrane10 .
?sam18 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane19 faldo:begin ?transmembraneb20 ;
faldo:end ?transmembranee21 .
?transmembraneb20 faldo:position ?transmembranebp22 .
?transmembranee21 faldo:position ?transmembraneep23 .
?keyword24 up:range ?transmembrane19 .
?keyword25 up:range ?transmembrane19 .
?keyword26 up:range ?transmembrane19 .
?sam27 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane28 faldo:begin ?transmembraneb29 ;
faldo:end ?transmembranee30 .
?transmembraneb29 faldo:position ?transmembranebp31 .
?transmembranee30 faldo:position ?transmembraneep32 .
?keyword33 up:range ?transmembrane28 .
?keyword34 up:range ?transmembrane28 .
?keyword35 up:range ?transmembrane28 .
?sam36 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane37 faldo:begin ?transmembraneb38 ;
faldo:end ?transmembranee39 .
?transmembraneb38 faldo:position ?transmembranebp40 .
?transmembranee39 faldo:position ?transmembraneep41 .
?keyword42 up:range ?transmembrane37 .
?keyword43 up:range ?transmembrane37 .
?keyword44 up:range ?transmembrane37 .
?sam45 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane46 faldo:begin ?transmembraneb47 ;
faldo:end ?transmembranee48 .
?transmembraneb47 faldo:position ?transmembranebp49 .
?transmembranee48 faldo:position ?transmembraneep50 .
?keyword51 up:range ?transmembrane46 .
?keyword52 up:range ?transmembrane46 .
?keyword53 up:range ?transmembrane46 .
_:166815 a rdf:Statement ;
up:attribution _:166776 ;
rdf:subject ?gene0 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene0 .
_:166816 a rdf:Statement ;
up:attribution _:166777 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:166817 a rdf:Statement ;
up:attribution _:166778 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:166818 a rdf:Statement ;
up:attribution _:166779 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:166819 a rdf:Statement ;
up:attribution _:166780 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:653 .
_:166820 a rdf:Statement ;
up:attribution _:166781 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:811 .
_:166821 a rdf:Statement ;
up:attribution _:166782 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:166822 a rdf:Statement ;
up:attribution _:166783 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:166823 a rdf:Statement ;
up:attribution _:166784 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:813 .
_:166824 a rdf:Statement ;
up:attribution _:166785 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008320 .
_:166825 a rdf:Statement ;
up:attribution _:166786 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0009306 .
_:166826 a rdf:Statement ;
up:attribution _:166787 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0065002 .
_:166827 a rdf:Statement ;
up:attribution _:166788 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006605 .
_:166828 a rdf:Statement ;
up:attribution _:166789 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:166829 a rdf:Statement ;
up:attribution _:166790 ;
rdf:subject ?case4 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0043952 .
_:166830 a rdf:Statement ;
up:attribution _:166791 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:166831 a rdf:Statement ;
up:attribution _:166792 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:166832 a rdf:Statement ;
up:attribution _:166793 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:166833 a rdf:Statement ;
up:attribution _:166794 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:166834 a rdf:Statement ;
up:attribution _:166795 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:793 .
_:166835 a rdf:Statement ;
up:attribution _:166796 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042651 .
_:166836 a rdf:Statement ;
up:attribution _:166797 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:166837 a rdf:Statement ;
up:attribution _:166798 ;
rdf:subject ?case7 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:166838 a rdf:Statement ;
up:attribution _:166799 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:166839 a rdf:Statement ;
up:attribution _:166800 ;
rdf:subject ?sam9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:166840 a rdf:Statement ;
up:attribution _:166801 ;
rdf:subject ?sam9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:166841 a rdf:Statement ;
up:attribution _:166802 ;
rdf:subject ?sam9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:166842 a rdf:Statement ;
up:attribution _:166803 ;
rdf:subject ?sam18 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:166843 a rdf:Statement ;
up:attribution _:166804 ;
rdf:subject ?sam18 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:166844 a rdf:Statement ;
up:attribution _:166805 ;
rdf:subject ?sam18 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:166845 a rdf:Statement ;
up:attribution _:166806 ;
rdf:subject ?sam27 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:166846 a rdf:Statement ;
up:attribution _:166807 ;
rdf:subject ?sam27 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:166847 a rdf:Statement ;
up:attribution _:166808 ;
rdf:subject ?sam27 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:166848 a rdf:Statement ;
up:attribution _:166809 ;
rdf:subject ?sam36 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:166849 a rdf:Statement ;
up:attribution _:166810 ;
rdf:subject ?sam36 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:166850 a rdf:Statement ;
up:attribution _:166811 ;
rdf:subject ?sam36 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:166851 a rdf:Statement ;
up:attribution _:166812 ;
rdf:subject ?sam45 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:166852 a rdf:Statement ;
up:attribution _:166813 ;
rdf:subject ?sam45 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:166853 a rdf:Statement ;
up:attribution _:166814 ;
rdf:subject ?sam45 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00422
#Rule MF_00422 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
VALUES ?supertaxon54 {taxon:2157 taxon:2}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00422 .
?thisOrganism rdfs:subClassOf+ ?supertaxon54 .
BIND(URI(CONCAT(STR(?this), '#MF_00422a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a2')) AS ?annotation2) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(?this AS ?case3) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(?this AS ?case4) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:33071 .
BIND(?this AS ?case5) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:1117 .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:33071 .
})) .
BIND(?this AS ?case6) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
{
?this up:proteome .
} UNION {
?this up:proteome ?p55 .
?p55 skos:narrower .
}
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:1117 .
})) .
BIND(?this AS ?case7) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
{
?this up:proteome .
} UNION {
?this up:proteome ?p56 .
?p56 skos:narrower .
}
})) .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:1117 .
})) .
} UNION {
?this up:organism ?thisOrganism .
{
?this up:proteome .
} UNION {
?this up:proteome ?p57 .
?p57 skos:narrower .
}
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:1117 .
})) .
}
BIND(?this AS ?case8) .
}
OPTIONAL {
?this up:annotation ?samtransmembrane58 ;
up:sequence ?thisSequence .
?samtransmembrane58 up:range ?samtransmembraner59 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner59 faldo:begin ?samtransmembraneb60 ;
faldo:end ?samtransmembranee61 .
?samtransmembraneb60 faldo:position ?samtransmembranebp62 ;
faldo:reference ?thisSequence .
?samtransmembranee61 faldo:position ?samtransmembraneep63 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam9) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00422a15')) AS ?keyword15) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a16')) AS ?keyword16) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a17')) AS ?keyword17) .
OPTIONAL {
?this up:annotation ?samtransmembrane64 ;
up:sequence ?thisSequence .
?samtransmembrane64 up:range ?samtransmembraner65 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner65 faldo:begin ?samtransmembraneb66 ;
faldo:end ?samtransmembranee67 .
?samtransmembraneb66 faldo:position ?samtransmembranebp68 ;
faldo:reference ?thisSequence .
?samtransmembranee67 faldo:position ?samtransmembraneep69 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam18) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00422a24')) AS ?keyword24) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a25')) AS ?keyword25) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a26')) AS ?keyword26) .
OPTIONAL {
?this up:annotation ?samtransmembrane70 ;
up:sequence ?thisSequence .
?samtransmembrane70 up:range ?samtransmembraner71 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner71 faldo:begin ?samtransmembraneb72 ;
faldo:end ?samtransmembranee73 .
?samtransmembraneb72 faldo:position ?samtransmembranebp74 ;
faldo:reference ?thisSequence .
?samtransmembranee73 faldo:position ?samtransmembraneep75 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam27) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00422a33')) AS ?keyword33) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a34')) AS ?keyword34) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a35')) AS ?keyword35) .
OPTIONAL {
?this up:annotation ?samtransmembrane76 ;
up:sequence ?thisSequence .
?samtransmembrane76 up:range ?samtransmembraner77 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner77 faldo:begin ?samtransmembraneb78 ;
faldo:end ?samtransmembranee79 .
?samtransmembraneb78 faldo:position ?samtransmembranebp80 ;
faldo:reference ?thisSequence .
?samtransmembranee79 faldo:position ?samtransmembraneep81 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam36) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00422a42')) AS ?keyword42) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a43')) AS ?keyword43) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a44')) AS ?keyword44) .
OPTIONAL {
?this up:annotation ?samtransmembrane82 ;
up:sequence ?thisSequence .
?samtransmembrane82 up:range ?samtransmembraner83 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner83 faldo:begin ?samtransmembraneb84 ;
faldo:end ?samtransmembranee85 .
?samtransmembraneb84 faldo:position ?samtransmembranebp86 ;
faldo:reference ?thisSequence .
?samtransmembranee85 faldo:position ?samtransmembraneep87 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam45) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00422a51')) AS ?keyword51) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a52')) AS ?keyword52) .
BIND(URI(CONCAT(STR(?this), '#MF_00422a53')) AS ?keyword53) .
}
"xsd:string |
| http://purl.uniprot.org/unirules/MF_00422 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00422#construct |
