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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-126 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-80 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-103 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-81 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-128 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-104 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-82 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-129 |
| http://purl.uniprot.org/unirules/MF_00556#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00556#construct-template-105 |
| http://purl.uniprot.org/unirules/MF_00556#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00556#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00556#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00556#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00556#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00556#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:216976 up:source unirule:MF_00556 . _:216977 up:source unirule:MF_00556 . _:216978 up:source unirule:MF_00556 . _:216979 up:source unirule:MF_00556 . _:216980 up:source unirule:MF_00556 . _:216981 up:source unirule:MF_00556 . _:216982 up:source unirule:MF_00556 . _:216983 up:source unirule:MF_00556 . _:216984 up:source unirule:MF_00556 . _:216985 up:source unirule:MF_00556 . _:216986 up:source unirule:MF_00556 . _:216987 up:source unirule:MF_00556 . _:216988 up:source unirule:MF_00556 . _:216989 up:source unirule:MF_00556 . _:216990 up:source unirule:MF_00556 . _:216991 up:source unirule:MF_00556 . _:216992 up:source unirule:MF_00556 . _:216993 up:source unirule:MF_00556 . _:216994 up:source unirule:MF_00556 . _:216995 up:source unirule:MF_00556 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation3 ; up:classifiedWith GO:0005344 , GO:0005506 , GO:0015671 , keyword:408 , keyword:479 , keyword:561 , keyword:813 ; up:recommendedName ?name0 . ?name0 up:fullName 'Bacteriohemerythrin' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen-binding site contains two iron atoms.' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Monomer.' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the hemerythrin family.' . ?pfs4 up:annotation ?annotation5 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; up:ligand ?ligand8 ; rdf:type up:Binding_Site_Annotation . ?pfsb6 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn10 ; rdf:type faldo:ExactPosition . ?ligand8 rdfs:subClassOf chebi:24875 . ?pfs11 up:annotation ?annotation12 . ?annotation12 faldo:begin ?pfsb13 ; faldo:end ?pfse14 ; up:ligand ?ligand15 ; rdf:type up:Binding_Site_Annotation . ?pfsb13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?pfse14 faldo:position ?thisPositionOn17 ; rdf:type faldo:ExactPosition . ?ligand15 rdfs:subClassOf chebi:24875 . ?pfs18 up:annotation ?annotation19 . ?annotation19 faldo:begin ?pfsb20 ; faldo:end ?pfse21 ; up:ligand ?ligand22 ; rdf:type up:Binding_Site_Annotation . ?pfsb20 faldo:position ?thisPositionOn23 ; rdf:type faldo:ExactPosition . ?pfse21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?ligand22 rdfs:subClassOf chebi:24875 . ?pfs25 up:annotation ?annotation26 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf chebi:24875 . ?pfs32 up:annotation ?annotation33 . ?annotation33 faldo:begin ?pfsb34 ; faldo:end ?pfse35 ; up:ligand ?ligand36 ; rdf:type up:Binding_Site_Annotation . ?pfsb34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?pfse35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?ligand36 rdfs:subClassOf chebi:24875 . ?pfs39 up:annotation ?annotation40 . ?annotation40 faldo:begin ?pfsb41 ; faldo:end ?pfse42 ; up:ligand ?ligand43 ; rdf:type up:Binding_Site_Annotation . ?pfsb41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?ligand43 rdfs:subClassOf chebi:24875 . ?pfs46 up:annotation ?annotation47 . ?annotation47 faldo:begin ?pfsb48 ; faldo:end ?pfse49 ; up:ligand ?ligand50 ; rdf:type up:Binding_Site_Annotation . ?pfsb48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?ligand50 rdfs:subClassOf chebi:24875 . ?pfs53 up:annotation ?annotation54 . ?annotation54 faldo:begin ?pfsb55 ; faldo:end ?pfse56 ; up:ligand ?ligand57 ; rdf:type up:Binding_Site_Annotation . ?pfsb55 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?pfse56 faldo:position ?thisPositionOn59 ; rdf:type faldo:ExactPosition . ?ligand57 rdfs:subClassOf chebi:24875 . ?pfs60 up:annotation ?annotation61 . ?annotation61 faldo:begin ?pfsb62 ; faldo:end ?pfse63 ; up:ligand ?ligand64 ; rdf:type up:Binding_Site_Annotation . ?pfsb62 faldo:position ?thisPositionOn65 ; rdf:type faldo:ExactPosition . ?pfse63 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?ligand64 rdfs:subClassOf chebi:24875 . _:216996 a rdf:Statement ; up:attribution _:216976 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:216997 a rdf:Statement ; up:attribution _:216977 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:216998 a rdf:Statement ; up:attribution _:216978 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:216999 a rdf:Statement ; up:attribution _:216979 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:217000 a rdf:Statement ; up:attribution _:216980 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:408 . _:217001 a rdf:Statement ; up:attribution _:216981 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:217002 a rdf:Statement ; up:attribution _:216982 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:561 . _:217003 a rdf:Statement ; up:attribution _:216983 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:217004 a rdf:Statement ; up:attribution _:216984 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005344 . _:217005 a rdf:Statement ; up:attribution _:216985 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005506 . _:217006 a rdf:Statement ; up:attribution _:216986 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0015671 . _:217007 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:217008 a rdf:Statement ; up:attribution _:216987 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:217009 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:217010 a rdf:Statement ; up:attribution _:216988 ; rdf:subject ?pfs11 ; rdf:predicate up:annotation ; rdf:object ?annotation12 . _:217011 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:217012 a rdf:Statement ; up:attribution _:216989 ; rdf:subject ?pfs18 ; rdf:predicate up:annotation ; rdf:object ?annotation19 . _:217013 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:217014 a rdf:Statement ; up:attribution _:216990 ; rdf:subject ?pfs25 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:217015 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:217016 a rdf:Statement ; up:attribution _:216991 ; rdf:subject ?pfs32 ; rdf:predicate up:annotation ; rdf:object ?annotation33 . _:217017 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:217018 a rdf:Statement ; up:attribution _:216992 ; rdf:subject ?pfs39 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:217019 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:217020 a rdf:Statement ; up:attribution _:216993 ; rdf:subject ?pfs46 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:217021 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:217022 a rdf:Statement ; up:attribution _:216994 ; rdf:subject ?pfs53 ; rdf:predicate up:annotation ; rdf:object ?annotation54 . _:217023 a rdf:Statement ; up:source unirule:MF_00556 ; rdf:subject ?pfs60 ; rdf:predicate up:annotation ; rdf:object ?annotation61 . _:217024 a rdf:Statement ; up:attribution _:216995 ; rdf:subject ?pfs60 ; rdf:predicate up:annotation ; rdf:object ?annotation61 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00556 #Rule MF_00556 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01 VALUES ?supertaxon67 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00556 . ?thisOrganism rdfs:subClassOf+ ?supertaxon67 . BIND(URI(CONCAT(STR(?this), '#MF_00556a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00556a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_00556a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_00556a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch72 faldo:location ?templateMotifSequenceMatchRegionQ5815773 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5815775 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_0055668 . ?templateMotifSequenceMatchRegionQ5815773 faldo:begin ?templateMotifSequenceMatchBeginQ5815774 . ?templateMotifSequenceMatchBeginQ5815774 faldo:position ?templateMotifSequenceMatchBeginPositionQ5815769 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ5815775 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch76 faldo:location ?targetMotifMatchRegionMatch77 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0055679 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_0055670 . ?targetMotifMatchRegionMatch77 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0055678 . ?targetMotifMatchRegionMatchBeginMF_0055678 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0055671 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0055679 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_0055668, 1, (STRLEN(?templateMotifCigarQ58157MF_0055668) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_0055668, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionQ5815769) + 1)), '}'), '')))), '[a-z]', '')) AS ?step180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_0055670, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_0055670) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_0055670, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_0055670, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_0055670) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_0055670, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), '')))), '[^-]', ''))) AS ?step281) . BIND(((?step281 + ?targetMotifMatchRegionMatchBeginPositionMF_0055671) - 1) AS ?thisPositionOn9) . BIND(?thisPositionOn9 AS ?thisPositionOn10) . BIND(?this AS ?pfs1t82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfse7) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn9, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a5')) AS ?annotation5) . BIND(?this AS ?pfs4) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch87 faldo:location ?templateMotifSequenceMatchRegionQ5815788 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5815790 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_0055683 . ?templateMotifSequenceMatchRegionQ5815788 faldo:begin ?templateMotifSequenceMatchBeginQ5815789 . ?templateMotifSequenceMatchBeginQ5815789 faldo:position ?templateMotifSequenceMatchBeginPositionQ5815784 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ5815790 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch91 faldo:location ?targetMotifMatchRegionMatch92 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0055694 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_0055685 . ?targetMotifMatchRegionMatch92 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0055693 . ?targetMotifMatchRegionMatchBeginMF_0055693 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0055686 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0055694 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_0055683, 1, (STRLEN(?templateMotifCigarQ58157MF_0055683) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_0055683, CONCAT('^(?:-*[^-]){', STR(((60 - ?templateMotifSequenceMatchBeginPositionQ5815784) + 1)), '}'), '')))), '[a-z]', '')) AS ?step195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_0055685, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_0055685) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_0055685, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_0055685, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_0055685) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_0055685, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), '')))), '[^-]', ''))) AS ?step296) . BIND(((?step296 + ?targetMotifMatchRegionMatchBeginPositionMF_0055686) - 1) AS ?thisPositionOn16) . BIND(?thisPositionOn16 AS ?thisPositionOn17) . BIND(?this AS ?pfs1t97) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a12')) AS ?annotation12) . BIND(?this AS ?pfs11) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch102 faldo:location ?templateMotifSequenceMatchRegionQ58157103 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157105 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_0055698 . ?templateMotifSequenceMatchRegionQ58157103 faldo:begin ?templateMotifSequenceMatchBeginQ58157104 . ?templateMotifSequenceMatchBeginQ58157104 faldo:position ?templateMotifSequenceMatchBeginPositionQ5815799 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157105 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch106 faldo:location ?targetMotifMatchRegionMatch107 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556109 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556100 . ?targetMotifMatchRegionMatch107 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556108 . ?targetMotifMatchRegionMatchBeginMF_00556108 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556101 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556109 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_0055698, 1, (STRLEN(?templateMotifCigarQ58157MF_0055698) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_0055698, CONCAT('^(?:-*[^-]){', STR(((64 - ?templateMotifSequenceMatchBeginPositionQ5815799) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1110) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556100, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556100) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556100, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1110), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556100, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556100) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556100, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1110), '}'), '')))), '[^-]', ''))) AS ?step2111) . BIND(((?step2111 + ?targetMotifMatchRegionMatchBeginPositionMF_00556101) - 1) AS ?thisPositionOn23) . BIND(?thisPositionOn23 AS ?thisPositionOn24) . BIND(?this AS ?pfs1t112) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfsb20) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfse21) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn23, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a19')) AS ?annotation19) . BIND(?this AS ?pfs18) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch117 faldo:location ?templateMotifSequenceMatchRegionQ58157118 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157120 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_00556113 . ?templateMotifSequenceMatchRegionQ58157118 faldo:begin ?templateMotifSequenceMatchBeginQ58157119 . ?templateMotifSequenceMatchBeginQ58157119 faldo:position ?templateMotifSequenceMatchBeginPositionQ58157114 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157120 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch121 faldo:location ?targetMotifMatchRegionMatch122 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556124 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556115 . ?targetMotifMatchRegionMatch122 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556123 . ?targetMotifMatchRegionMatchBeginMF_00556123 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556116 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556124 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_00556113, 1, (STRLEN(?templateMotifCigarQ58157MF_00556113) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_00556113, CONCAT('^(?:-*[^-]){', STR(((64 - ?templateMotifSequenceMatchBeginPositionQ58157114) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1125) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556115, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556115) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556115, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1125), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556115, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556115) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556115, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1125), '}'), '')))), '[^-]', ''))) AS ?step2126) . BIND(((?step2126 + ?targetMotifMatchRegionMatchBeginPositionMF_00556116) - 1) AS ?thisPositionOn30) . BIND(?thisPositionOn30 AS ?thisPositionOn31) . BIND(?this AS ?pfs1t127) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'E')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a26')) AS ?annotation26) . BIND(?this AS ?pfs25) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch132 faldo:location ?templateMotifSequenceMatchRegionQ58157133 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157135 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_00556128 . ?templateMotifSequenceMatchRegionQ58157133 faldo:begin ?templateMotifSequenceMatchBeginQ58157134 . ?templateMotifSequenceMatchBeginQ58157134 faldo:position ?templateMotifSequenceMatchBeginPositionQ58157129 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157135 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch136 faldo:location ?targetMotifMatchRegionMatch137 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556139 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556130 . ?targetMotifMatchRegionMatch137 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556138 . ?targetMotifMatchRegionMatchBeginMF_00556138 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556131 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556139 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_00556128, 1, (STRLEN(?templateMotifCigarQ58157MF_00556128) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_00556128, CONCAT('^(?:-*[^-]){', STR(((79 - ?templateMotifSequenceMatchBeginPositionQ58157129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1140) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556130, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556130) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556130, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556130) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), '')))), '[^-]', ''))) AS ?step2141) . BIND(((?step2141 + ?targetMotifMatchRegionMatchBeginPositionMF_00556131) - 1) AS ?thisPositionOn37) . BIND(?thisPositionOn37 AS ?thisPositionOn38) . BIND(?this AS ?pfs1t142) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a33')) AS ?annotation33) . BIND(?this AS ?pfs32) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch147 faldo:location ?templateMotifSequenceMatchRegionQ58157148 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157150 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_00556143 . ?templateMotifSequenceMatchRegionQ58157148 faldo:begin ?templateMotifSequenceMatchBeginQ58157149 . ?templateMotifSequenceMatchBeginQ58157149 faldo:position ?templateMotifSequenceMatchBeginPositionQ58157144 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157150 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch151 faldo:location ?targetMotifMatchRegionMatch152 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556154 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556145 . ?targetMotifMatchRegionMatch152 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556153 . ?targetMotifMatchRegionMatchBeginMF_00556153 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556146 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556154 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_00556143, 1, (STRLEN(?templateMotifCigarQ58157MF_00556143) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_00556143, CONCAT('^(?:-*[^-]){', STR(((83 - ?templateMotifSequenceMatchBeginPositionQ58157144) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1155) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556145, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556145) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556145, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1155), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556145, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556145) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556145, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1155), '}'), '')))), '[^-]', ''))) AS ?step2156) . BIND(((?step2156 + ?targetMotifMatchRegionMatchBeginPositionMF_00556146) - 1) AS ?thisPositionOn44) . BIND(?thisPositionOn44 AS ?thisPositionOn45) . BIND(?this AS ?pfs1t157) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a40')) AS ?annotation40) . BIND(?this AS ?pfs39) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch162 faldo:location ?templateMotifSequenceMatchRegionQ58157163 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157165 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_00556158 . ?templateMotifSequenceMatchRegionQ58157163 faldo:begin ?templateMotifSequenceMatchBeginQ58157164 . ?templateMotifSequenceMatchBeginQ58157164 faldo:position ?templateMotifSequenceMatchBeginPositionQ58157159 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157165 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch166 faldo:location ?targetMotifMatchRegionMatch167 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556169 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556160 . ?targetMotifMatchRegionMatch167 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556168 . ?targetMotifMatchRegionMatchBeginMF_00556168 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556161 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556169 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_00556158, 1, (STRLEN(?templateMotifCigarQ58157MF_00556158) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_00556158, CONCAT('^(?:-*[^-]){', STR(((120 - ?templateMotifSequenceMatchBeginPositionQ58157159) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1170) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556160, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556160) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1170), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556160, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556160) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556160, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1170), '}'), '')))), '[^-]', ''))) AS ?step2171) . BIND(((?step2171 + ?targetMotifMatchRegionMatchBeginPositionMF_00556161) - 1) AS ?thisPositionOn51) . BIND(?thisPositionOn51 AS ?thisPositionOn52) . BIND(?this AS ?pfs1t172) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a47')) AS ?annotation47) . BIND(?this AS ?pfs46) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch177 faldo:location ?templateMotifSequenceMatchRegionQ58157178 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157180 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_00556173 . ?templateMotifSequenceMatchRegionQ58157178 faldo:begin ?templateMotifSequenceMatchBeginQ58157179 . ?templateMotifSequenceMatchBeginQ58157179 faldo:position ?templateMotifSequenceMatchBeginPositionQ58157174 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157180 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch181 faldo:location ?targetMotifMatchRegionMatch182 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556184 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556175 . ?targetMotifMatchRegionMatch182 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556183 . ?targetMotifMatchRegionMatchBeginMF_00556183 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556176 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556184 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_00556173, 1, (STRLEN(?templateMotifCigarQ58157MF_00556173) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_00556173, CONCAT('^(?:-*[^-]){', STR(((125 - ?templateMotifSequenceMatchBeginPositionQ58157174) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1185) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556175, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556175) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556175, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556175, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556175) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556175, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1185), '}'), '')))), '[^-]', ''))) AS ?step2186) . BIND(((?step2186 + ?targetMotifMatchRegionMatchBeginPositionMF_00556176) - 1) AS ?thisPositionOn58) . BIND(?thisPositionOn58 AS ?thisPositionOn59) . BIND(?this AS ?pfs1t187) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb55) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse56) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn58, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a54')) AS ?annotation54) . BIND(?this AS ?pfs53) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch192 faldo:location ?templateMotifSequenceMatchRegionQ58157193 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ58157195 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58157MF_00556188 . ?templateMotifSequenceMatchRegionQ58157193 faldo:begin ?templateMotifSequenceMatchBeginQ58157194 . ?templateMotifSequenceMatchBeginQ58157194 faldo:position ?templateMotifSequenceMatchBeginPositionQ58157189 ; faldo:reference isoform:Q58157-1 . ?templateMotifSequenceProfileAlignmentOperationQ58157195 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . ?targetMotifMatch196 faldo:location ?targetMotifMatchRegionMatch197 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00556199 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58157MF_00556190 . ?targetMotifMatchRegionMatch197 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00556198 . ?targetMotifMatchRegionMatchBeginMF_00556198 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00556191 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00556199 edam:has_input signature:MF_00556 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58157MF_00556188, 1, (STRLEN(?templateMotifCigarQ58157MF_00556188) - STRLEN(REPLACE(?templateMotifCigarQ58157MF_00556188, CONCAT('^(?:-*[^-]){', STR(((125 - ?templateMotifSequenceMatchBeginPositionQ58157189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1200) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58157MF_00556190, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556190) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58157MF_00556190, 1, (STRLEN(?targetMotifMatchCigarQ58157MF_00556190) - STRLEN(REPLACE(?targetMotifMatchCigarQ58157MF_00556190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), '')))), '[^-]', ''))) AS ?step2201) . BIND(((?step2201 + ?targetMotifMatchRegionMatchBeginPositionMF_00556191) - 1) AS ?thisPositionOn65) . BIND(?thisPositionOn65 AS ?thisPositionOn66) . BIND(?this AS ?pfs1t202) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfsb62) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfse63) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn65, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_00556a61')) AS ?annotation61) . BIND(?this AS ?pfs60) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00556 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00556#construct |