| http://purl.uniprot.org/unirules/MF_01374#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:494540 up:source unirule:MF_01374 .
_:494541 up:source unirule:MF_01374 .
_:494542 up:source unirule:MF_01374 .
_:494543 up:source unirule:MF_01374 .
_:494544 up:source unirule:MF_01374 .
_:494545 up:source unirule:MF_01374 .
_:494546 up:source unirule:MF_01374 .
_:494547 up:source unirule:MF_01374 .
_:494548 up:source unirule:MF_01374 .
_:494549 up:source unirule:MF_01374 .
_:494550 up:source unirule:MF_01374 .
_:494551 up:source unirule:MF_01374 .
_:494552 up:source unirule:MF_01374 .
_:494553 up:source unirule:MF_01374 .
_:494554 up:source unirule:MF_01374 .
_:494555 up:source unirule:MF_01374 .
_:494556 up:source unirule:MF_01374 .
_:494557 up:source unirule:MF_01374 .
_:494558 up:source unirule:MF_01374 .
_:494559 up:source unirule:MF_01374 .
_:494560 up:source unirule:MF_01374 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation8 ,
?annotation9 ;
up:classifiedWith GO:0004416 ,
keyword:378 ,
keyword:479 ,
keyword:862 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.1.2.6' ;
up:fullName 'Hydroxyacylglutathione hydrolase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Glyoxalase II' ;
up:shortName 'Glx II' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'gloB' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 up:cofactor chebi:29105 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 2 Zn(2+) ions per subunit.' .
?annotation7 a up:Pathway_Annotation ;
rdfs:comment 'Secondary metabolite metabolism; methylglyoxal degradation; (R)-lactate from methylglyoxal: step 2/2.' .
?annotation8 a up:Subunit_Annotation ;
rdfs:comment 'Monomer.' .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.' .
?pfs10 up:annotation ?annotation11 ,
?annotation17 ,
?annotation23 ,
?annotation29 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
up:ligand ?ligand14 ;
rdf:type up:Binding_Site_Annotation .
?pfsb12 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?ligand14 rdfs:subClassOf chebi:29105 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
up:ligand ?ligand20 ;
rdf:type up:Binding_Site_Annotation .
?pfsb18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?ligand20 rdfs:subClassOf chebi:29105 .
?annotation23 faldo:begin ?pfsb24 ;
faldo:end ?pfse25 ;
up:ligand ?ligand26 ;
rdf:type up:Binding_Site_Annotation .
?pfsb24 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?pfse25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?ligand26 rdfs:subClassOf chebi:29105 .
?annotation29 faldo:begin ?pfsb30 ;
faldo:end ?pfse31 ;
up:ligand ?ligand32 ;
rdf:type up:Binding_Site_Annotation .
?pfsb30 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?pfse31 faldo:position ?thisPositionOn34 ;
rdf:type faldo:ExactPosition .
?ligand32 rdfs:subClassOf chebi:29105 .
?pfs35 up:annotation ?annotation36 ,
?annotation42 ,
?annotation48 ,
?annotation54 .
?annotation36 faldo:begin ?pfsb37 ;
faldo:end ?pfse38 ;
up:ligand ?ligand39 ;
rdf:type up:Binding_Site_Annotation .
?pfsb37 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?pfse38 faldo:position ?thisPositionOn41 ;
rdf:type faldo:ExactPosition .
?ligand39 rdfs:subClassOf chebi:29105 .
?annotation42 faldo:begin ?pfsb43 ;
faldo:end ?pfse44 ;
up:ligand ?ligand45 ;
rdf:type up:Binding_Site_Annotation .
?pfsb43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?pfse44 faldo:position ?thisPositionOn47 ;
rdf:type faldo:ExactPosition .
?ligand45 rdfs:subClassOf chebi:29105 .
?annotation48 faldo:begin ?pfsb49 ;
faldo:end ?pfse50 ;
up:ligand ?ligand51 ;
rdf:type up:Binding_Site_Annotation .
?pfsb49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?pfse50 faldo:position ?thisPositionOn53 ;
rdf:type faldo:ExactPosition .
?ligand51 rdfs:subClassOf chebi:29105 .
?annotation54 faldo:begin ?pfsb55 ;
faldo:end ?pfse56 ;
up:ligand ?ligand57 ;
rdf:type up:Binding_Site_Annotation .
?pfsb55 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?pfse56 faldo:position ?thisPositionOn59 ;
rdf:type faldo:ExactPosition .
?ligand57 rdfs:subClassOf chebi:29105 .
_:494561 a rdf:Statement ;
up:attribution _:494540 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:494562 a rdf:Statement ;
up:attribution _:494541 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:494563 a rdf:Statement ;
up:attribution _:494542 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:494564 a rdf:Statement ;
up:attribution _:494543 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:494565 a rdf:Statement ;
up:attribution _:494544 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:494566 a rdf:Statement ;
up:attribution _:494545 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:494567 a rdf:Statement ;
up:attribution _:494546 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:494568 a rdf:Statement ;
up:attribution _:494547 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:494569 a rdf:Statement ;
up:attribution _:494548 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:494570 a rdf:Statement ;
up:attribution _:494549 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:494571 a rdf:Statement ;
up:attribution _:494550 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:494572 a rdf:Statement ;
up:attribution _:494551 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:862 .
_:494573 a rdf:Statement ;
up:attribution _:494552 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004416 .
_:494574 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:494575 a rdf:Statement ;
up:attribution _:494553 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:494576 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:494577 a rdf:Statement ;
up:attribution _:494554 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:494578 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:494579 a rdf:Statement ;
up:attribution _:494555 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:494580 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:494581 a rdf:Statement ;
up:attribution _:494556 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:494582 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation36 .
_:494583 a rdf:Statement ;
up:attribution _:494557 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation36 .
_:494584 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:494585 a rdf:Statement ;
up:attribution _:494558 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:494586 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:494587 a rdf:Statement ;
up:attribution _:494559 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:494588 a rdf:Statement ;
up:source unirule:MF_01374 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation54 .
_:494589 a rdf:Statement ;
up:attribution _:494560 ;
rdf:subject ?pfs35 ;
rdf:predicate up:annotation ;
rdf:object ?annotation54 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01374
#Rule MF_01374 Created by:? on:2007-10-09 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01374 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01374a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01374a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch64 faldo:location ?templateMotifSequenceMatchRegionP0AC8465 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AC8467 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AC84MF_0137460 .
?templateMotifSequenceMatchRegionP0AC8465 faldo:begin ?templateMotifSequenceMatchBeginP0AC8466 .
?templateMotifSequenceMatchBeginP0AC8466 faldo:position ?templateMotifSequenceMatchBeginPositionP0AC8461 ;
faldo:reference isoform:P0AC84-1 .
?templateMotifSequenceProfileAlignmentOperationP0AC8467 edam:has_input signature:MF_01374 ;
rdf:type edam:operation_0300 .
?targetMotifMatch68 faldo:location ?targetMotifMatchRegionMatch69 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0137471 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AC84MF_0137462 .
?targetMotifMatchRegionMatch69 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0137470 .
?targetMotifMatchRegionMatchBeginMF_0137470 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0137463 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0137471 edam:has_input signature:MF_01374 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137460, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137460) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137460, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionP0AC8461) + 1)), '}'), '')))), '[a-z]', '')) AS ?step172) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), '')))), '[^-]', ''))) AS ?step273) .
BIND(((?step273 + ?targetMotifMatchRegionMatchBeginPositionMF_0137463) - 1) AS ?thisPositionOn15) .
BIND(?thisPositionOn15 AS ?thisPositionOn16) .
BIND(?this AS ?pfs1t74) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137460, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137460) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137460, CONCAT('^(?:-*[^-]){', STR(((55 - ?templateMotifSequenceMatchBeginPositionP0AC8461) + 1)), '}'), '')))), '[a-z]', '')) AS ?step175) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), '')))), '[^-]', ''))) AS ?step276) .
BIND(((?step276 + ?targetMotifMatchRegionMatchBeginPositionMF_0137463) - 1) AS ?thisPositionOn21) .
BIND(?thisPositionOn21 AS ?thisPositionOn22) .
BIND(?this AS ?pfs1t77) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137460, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137460) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137460, CONCAT('^(?:-*[^-]){', STR(((110 - ?templateMotifSequenceMatchBeginPositionP0AC8461) + 1)), '}'), '')))), '[a-z]', '')) AS ?step178) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step178), '}'), '')))), '[^-]', ''))) AS ?step279) .
BIND(((?step279 + ?targetMotifMatchRegionMatchBeginPositionMF_0137463) - 1) AS ?thisPositionOn27) .
BIND(?thisPositionOn27 AS ?thisPositionOn28) .
BIND(?this AS ?pfs1t80) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137460, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137460) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137460, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionP0AC8461) + 1)), '}'), '')))), '[a-z]', '')) AS ?step181) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137462, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137462) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step181), '}'), '')))), '[^-]', ''))) AS ?step282) .
BIND(((?step282 + ?targetMotifMatchRegionMatchBeginPositionMF_0137463) - 1) AS ?thisPositionOn33) .
BIND(?thisPositionOn33 AS ?thisPositionOn34) .
BIND(?this AS ?pfs1t83) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'D')) .
BIND(?this AS ?pfs10) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch88 faldo:location ?templateMotifSequenceMatchRegionP0AC8489 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0AC8491 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0AC84MF_0137484 .
?templateMotifSequenceMatchRegionP0AC8489 faldo:begin ?templateMotifSequenceMatchBeginP0AC8490 .
?templateMotifSequenceMatchBeginP0AC8490 faldo:position ?templateMotifSequenceMatchBeginPositionP0AC8485 ;
faldo:reference isoform:P0AC84-1 .
?templateMotifSequenceProfileAlignmentOperationP0AC8491 edam:has_input signature:MF_01374 ;
rdf:type edam:operation_0300 .
?targetMotifMatch92 faldo:location ?targetMotifMatchRegionMatch93 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0137495 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0AC84MF_0137486 .
?targetMotifMatchRegionMatch93 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0137494 .
?targetMotifMatchRegionMatchBeginMF_0137494 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0137487 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0137495 edam:has_input signature:MF_01374 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137484, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137484) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137484, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionP0AC8485) + 1)), '}'), '')))), '[a-z]', '')) AS ?step196) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step196), '}'), '')))), '[^-]', ''))) AS ?step297) .
BIND(((?step297 + ?targetMotifMatchRegionMatchBeginPositionMF_0137487) - 1) AS ?thisPositionOn40) .
BIND(?thisPositionOn40 AS ?thisPositionOn41) .
BIND(?this AS ?pfs2t98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb37) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse38) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'D')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137484, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137484) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137484, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionP0AC8485) + 1)), '}'), '')))), '[a-z]', '')) AS ?step199) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), '')))), '[^-]', ''))) AS ?step2100) .
BIND(((?step2100 + ?targetMotifMatchRegionMatchBeginPositionMF_0137487) - 1) AS ?thisPositionOn46) .
BIND(?thisPositionOn46 AS ?thisPositionOn47) .
BIND(?this AS ?pfs2t101) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn46, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137484, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137484) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137484, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionP0AC8485) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1102) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), '')))), '[^-]', ''))) AS ?step2103) .
BIND(((?step2103 + ?targetMotifMatchRegionMatchBeginPositionMF_0137487) - 1) AS ?thisPositionOn52) .
BIND(?thisPositionOn52 AS ?thisPositionOn53) .
BIND(?this AS ?pfs2t104) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1) = 'D')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0AC84MF_0137484, 1, (STRLEN(?templateMotifCigarP0AC84MF_0137484) - STRLEN(REPLACE(?templateMotifCigarP0AC84MF_0137484, CONCAT('^(?:-*[^-]){', STR(((165 - ?templateMotifSequenceMatchBeginPositionP0AC8485) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1105) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0AC84MF_0137486, 1, (STRLEN(?targetMotifMatchCigarP0AC84MF_0137486) - STRLEN(REPLACE(?targetMotifMatchCigarP0AC84MF_0137486, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), '')))), '[^-]', ''))) AS ?step2106) .
BIND(((?step2106 + ?targetMotifMatchRegionMatchBeginPositionMF_0137487) - 1) AS ?thisPositionOn58) .
BIND(?thisPositionOn58 AS ?thisPositionOn59) .
BIND(?this AS ?pfs2t107) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb55) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse56) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn58, 1) = 'H')) .
BIND(?this AS ?pfs35) .
}
}
"xsd:string |
