| http://purl.uniprot.org/unirules/MF_01921#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:671543 up:source unirule:MF_01921 .
_:671544 up:source unirule:MF_01921 .
_:671545 up:source unirule:MF_01921 .
_:671546 up:source unirule:MF_01921 .
_:671547 up:source unirule:MF_01921 .
_:671548 up:source unirule:MF_01921 .
_:671549 up:source unirule:MF_01921 .
_:671550 up:source unirule:MF_01921 .
_:671551 up:source unirule:MF_01921 .
_:671552 up:source unirule:MF_01921 .
_:671553 up:source unirule:MF_01921 .
_:671554 up:source unirule:MF_01921 .
_:671555 up:source unirule:MF_01921 .
_:671556 up:source unirule:MF_01921 .
_:671557 up:source unirule:MF_01921 .
_:671558 up:source unirule:MF_01921 .
_:671559 up:source unirule:MF_01921 .
_:671560 up:source unirule:MF_01921 .
_:671561 up:source unirule:MF_01921 .
_:671562 up:source unirule:MF_01921 .
_:671563 up:source unirule:MF_01921 .
_:671564 up:source unirule:MF_01921 .
_:671565 up:source unirule:MF_01921 .
_:671566 up:source unirule:MF_01921 .
_:671567 up:source unirule:MF_01921 .
_:671568 up:source unirule:MF_01921 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation9 ;
up:classifiedWith GO:0005737 ,
GO:0008033 ,
GO:0016833 ,
keyword:456 ,
keyword:819 ,
keyword:949 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '4.1.3.44' ;
up:fullName 'S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'tRNA wyosine derivatives biosynthesis protein Taw1' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'taw1' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe).' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 a up:Subunit_Annotation ;
rdfs:comment 'Monomer.' .
?annotation7 a up:Subcellular_Location_Annotation .
?annotation7li8 up:cellularComponent .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the TYW1 family.' .
?case10 up:classifiedWith GO:0051539 ,
keyword:408 ,
keyword:411 ,
keyword:479 ,
keyword:4 .
?pfs11 up:annotation ?annotation12 ,
?annotation18 ,
?annotation24 ,
?annotation30 ,
?annotation36 ,
?annotation42 .
?annotation12 faldo:begin ?pfsb13 ;
faldo:end ?pfse14 ;
up:ligand ?ligand15 ;
rdf:type up:Binding_Site_Annotation .
?pfsb13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?pfse14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?ligand15 rdfs:subClassOf chebi:49883 .
?annotation18 faldo:begin ?pfsb19 ;
faldo:end ?pfse20 ;
up:ligand ?ligand21 ;
rdf:type up:Binding_Site_Annotation .
?pfsb19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfse20 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?ligand21 rdfs:subClassOf chebi:49883 .
?annotation24 faldo:begin ?pfsb25 ;
faldo:end ?pfse26 ;
up:ligand ?ligand27 ;
rdf:type up:Binding_Site_Annotation .
?pfsb25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?pfse26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?ligand27 rdfs:subClassOf chebi:49883 .
?annotation30 faldo:begin ?pfsb31 ;
faldo:end ?pfse32 ;
up:ligand ?ligand33 ;
rdf:type up:Binding_Site_Annotation .
?pfsb31 faldo:position ?thisPositionOn34 ;
rdf:type faldo:ExactPosition .
?pfse32 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?ligand33 rdfs:subClassOf chebi:49883 .
?annotation36 faldo:begin ?pfsb37 ;
faldo:end ?pfse38 ;
up:ligand ?ligand39 ;
rdf:type up:Binding_Site_Annotation .
?pfsb37 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?pfse38 faldo:position ?thisPositionOn41 ;
rdf:type faldo:ExactPosition .
?ligand39 rdfs:subClassOf chebi:49883 .
?annotation42 faldo:begin ?pfsb43 ;
faldo:end ?pfse44 ;
up:ligand ?ligand45 ;
rdf:type up:Binding_Site_Annotation .
?pfsb43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?pfse44 faldo:position ?thisPositionOn47 ;
rdf:type faldo:ExactPosition .
?ligand45 rdfs:subClassOf chebi:49883 .
_:671569 a rdf:Statement ;
up:attribution _:671543 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:671570 a rdf:Statement ;
up:attribution _:671544 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:671571 a rdf:Statement ;
up:attribution _:671545 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:671572 a rdf:Statement ;
up:attribution _:671546 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:671573 a rdf:Statement ;
up:attribution _:671547 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:671574 a rdf:Statement ;
up:attribution _:671548 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:671575 a rdf:Statement ;
up:attribution _:671549 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:671576 a rdf:Statement ;
up:attribution _:671550 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:671577 a rdf:Statement ;
up:attribution _:671551 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:671578 a rdf:Statement ;
up:attribution _:671552 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:456 .
_:671579 a rdf:Statement ;
up:attribution _:671553 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:949 .
_:671580 a rdf:Statement ;
up:attribution _:671554 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:819 .
_:671581 a rdf:Statement ;
up:attribution _:671555 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016833 .
_:671582 a rdf:Statement ;
up:attribution _:671556 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008033 .
_:671583 a rdf:Statement ;
up:attribution _:671557 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:671584 a rdf:Statement ;
up:attribution _:671558 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:4 .
_:671585 a rdf:Statement ;
up:attribution _:671559 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:408 .
_:671586 a rdf:Statement ;
up:attribution _:671560 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:411 .
_:671587 a rdf:Statement ;
up:attribution _:671561 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:671588 a rdf:Statement ;
up:attribution _:671562 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051539 .
_:671589 a rdf:Statement ;
up:source unirule:MF_01921 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:671590 a rdf:Statement ;
up:attribution _:671563 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:671591 a rdf:Statement ;
up:source unirule:MF_01921 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:671592 a rdf:Statement ;
up:attribution _:671564 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:671593 a rdf:Statement ;
up:source unirule:MF_01921 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:671594 a rdf:Statement ;
up:attribution _:671565 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:671595 a rdf:Statement ;
up:source unirule:MF_01921 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation30 .
_:671596 a rdf:Statement ;
up:attribution _:671566 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation30 .
_:671597 a rdf:Statement ;
up:source unirule:MF_01921 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation36 .
_:671598 a rdf:Statement ;
up:attribution _:671567 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation36 .
_:671599 a rdf:Statement ;
up:source unirule:MF_01921 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:671600 a rdf:Statement ;
up:attribution _:671568 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01921
#Rule MF_01921 Created by:? on:2014-05-13 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01921 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(URI(CONCAT(STR(?this), '#MF_01921a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01921a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01921a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01921a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_01921a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01921a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01921a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch52 faldo:location ?templateMotifSequenceMatchRegionQ5770553 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5770555 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ57705MF_0192148 .
?templateMotifSequenceMatchRegionQ5770553 faldo:begin ?templateMotifSequenceMatchBeginQ5770554 .
?templateMotifSequenceMatchBeginQ5770554 faldo:position ?templateMotifSequenceMatchBeginPositionQ5770549 ;
faldo:reference isoform:Q57705-1 .
?templateMotifSequenceProfileAlignmentOperationQ5770555 edam:has_input signature:MF_01921 ;
rdf:type edam:operation_0300 .
?targetMotifMatch56 faldo:location ?targetMotifMatchRegionMatch57 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0192159 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ57705MF_0192150 .
?targetMotifMatchRegionMatch57 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0192158 .
?targetMotifMatchRegionMatchBeginMF_0192158 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0192151 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0192159 edam:has_input signature:MF_01921 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57705MF_0192148, 1, (STRLEN(?templateMotifCigarQ57705MF_0192148) - STRLEN(REPLACE(?templateMotifCigarQ57705MF_0192148, CONCAT('^(?:-*[^-]){', STR(((26 - ?templateMotifSequenceMatchBeginPositionQ5770549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step160) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step160), '}'), '')))), '[^-]', ''))) AS ?step261) .
BIND(((?step261 + ?targetMotifMatchRegionMatchBeginPositionMF_0192151) - 1) AS ?thisPositionOn16) .
BIND(?thisPositionOn16 AS ?thisPositionOn17) .
BIND(?this AS ?pfs1t62) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57705MF_0192148, 1, (STRLEN(?templateMotifCigarQ57705MF_0192148) - STRLEN(REPLACE(?templateMotifCigarQ57705MF_0192148, CONCAT('^(?:-*[^-]){', STR(((39 - ?templateMotifSequenceMatchBeginPositionQ5770549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step163) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step163), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step163), '}'), '')))), '[^-]', ''))) AS ?step264) .
BIND(((?step264 + ?targetMotifMatchRegionMatchBeginPositionMF_0192151) - 1) AS ?thisPositionOn22) .
BIND(?thisPositionOn22 AS ?thisPositionOn23) .
BIND(?this AS ?pfs1t65) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57705MF_0192148, 1, (STRLEN(?templateMotifCigarQ57705MF_0192148) - STRLEN(REPLACE(?templateMotifCigarQ57705MF_0192148, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionQ5770549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step166) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step166), '}'), '')))), '[^-]', ''))) AS ?step267) .
BIND(((?step267 + ?targetMotifMatchRegionMatchBeginPositionMF_0192151) - 1) AS ?thisPositionOn28) .
BIND(?thisPositionOn28 AS ?thisPositionOn29) .
BIND(?this AS ?pfs1t68) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57705MF_0192148, 1, (STRLEN(?templateMotifCigarQ57705MF_0192148) - STRLEN(REPLACE(?templateMotifCigarQ57705MF_0192148, CONCAT('^(?:-*[^-]){', STR(((62 - ?templateMotifSequenceMatchBeginPositionQ5770549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step169) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step169), '}'), '')))), '[^-]', ''))) AS ?step270) .
BIND(((?step270 + ?targetMotifMatchRegionMatchBeginPositionMF_0192151) - 1) AS ?thisPositionOn34) .
BIND(?thisPositionOn34 AS ?thisPositionOn35) .
BIND(?this AS ?pfs1t71) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb31) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse32) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn34, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57705MF_0192148, 1, (STRLEN(?templateMotifCigarQ57705MF_0192148) - STRLEN(REPLACE(?templateMotifCigarQ57705MF_0192148, CONCAT('^(?:-*[^-]){', STR(((66 - ?templateMotifSequenceMatchBeginPositionQ5770549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step172) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step172), '}'), '')))), '[^-]', ''))) AS ?step273) .
BIND(((?step273 + ?targetMotifMatchRegionMatchBeginPositionMF_0192151) - 1) AS ?thisPositionOn40) .
BIND(?thisPositionOn40 AS ?thisPositionOn41) .
BIND(?this AS ?pfs1t74) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb37) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse38) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ57705MF_0192148, 1, (STRLEN(?templateMotifCigarQ57705MF_0192148) - STRLEN(REPLACE(?templateMotifCigarQ57705MF_0192148, CONCAT('^(?:-*[^-]){', STR(((69 - ?templateMotifSequenceMatchBeginPositionQ5770549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step175) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ57705MF_0192150, 1, (STRLEN(?targetMotifMatchCigarQ57705MF_0192150) - STRLEN(REPLACE(?targetMotifMatchCigarQ57705MF_0192150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step175), '}'), '')))), '[^-]', ''))) AS ?step276) .
BIND(((?step276 + ?targetMotifMatchRegionMatchBeginPositionMF_0192151) - 1) AS ?thisPositionOn46) .
BIND(?thisPositionOn46 AS ?thisPositionOn47) .
BIND(?this AS ?pfs1t77) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn46, 1) = 'C')) .
BIND(?this AS ?pfs11) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag78) .
}
BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag78, ?UNBOUND_VARIABLE) AS ?case10) .
}
"xsd:string |
