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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-178 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-154 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-179 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-155 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-156 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-157 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-158 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-159 |
| http://purl.uniprot.org/unirules/MF_00157#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00157#construct-template-149 |
| http://purl.uniprot.org/unirules/MF_00157#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00157#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00157#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00157#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00157#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00157#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:62474 up:source unirule:MF_00157 . _:62475 up:source unirule:MF_00157 . _:62476 up:source unirule:MF_00157 . _:62477 up:source unirule:MF_00157 . _:62478 up:source unirule:MF_00157 . _:62479 up:source unirule:MF_00157 . _:62480 up:source unirule:MF_00157 . _:62481 up:source unirule:MF_00157 . _:62482 up:source unirule:MF_00157 . _:62483 up:source unirule:MF_00157 . _:62484 up:source unirule:MF_00157 . _:62485 up:source unirule:MF_00157 . _:62486 up:source unirule:MF_00157 . _:62487 up:source unirule:MF_00157 . _:62488 up:source unirule:MF_00157 . _:62489 up:source unirule:MF_00157 . _:62490 up:source unirule:MF_00157 . _:62491 up:source unirule:MF_00157 . _:62492 up:source unirule:MF_00157 . _:62493 up:source unirule:MF_00157 . _:62494 up:source unirule:MF_00157 . _:62495 up:source unirule:MF_00157 . _:62496 up:source unirule:MF_00157 . _:62497 up:source unirule:MF_00157 . _:62498 up:source unirule:MF_00157 . ?this up:alternativeName ?name1 ; up:annotation ?annotation3 , ?annotation4 , ?annotation5 ; up:classifiedWith GO:0006396 , GO:0016896 , keyword:269 , keyword:378 , keyword:540 , keyword:819 ; up:recommendedName ?name0 . ?name0 up:ecName '3.1.13.-' ; up:fullName 'Ribonuclease T' ; rdf:type up:Structured_Name . ?name1 up:fullName 'Exoribonuclease T' ; up:shortName 'RNase T' ; rdf:type up:Structured_Name . ?gene2 skos:prefLabel 'rnt' . ?annotation3 a up:Function_Annotation ; rdfs:comment "Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis." . ?annotation4 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?annotation5 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the RNase T family.' . ?case6 up:classifiedWith GO:0000287 , keyword:460 , keyword:479 . ?pfs7 up:annotation ?annotation8 , ?annotation14 , ?annotation20 , ?annotation26 , ?annotation32 . ?annotation8 faldo:begin ?pfsb9 ; faldo:end ?pfse10 ; up:ligand ?ligand11 ; rdf:type up:Binding_Site_Annotation . ?pfsb9 faldo:position ?thisPositionOn12 ; rdf:type faldo:ExactPosition . ?pfse10 faldo:position ?thisPositionOn13 ; rdf:type faldo:ExactPosition . ?ligand11 rdfs:subClassOf chebi:18420 . ?annotation14 faldo:begin ?pfsb15 ; faldo:end ?pfse16 ; up:ligand ?ligand17 ; rdf:type up:Binding_Site_Annotation . ?pfsb15 faldo:position ?thisPositionOn18 ; rdf:type faldo:ExactPosition . ?pfse16 faldo:position ?thisPositionOn19 ; rdf:type faldo:ExactPosition . ?ligand17 rdfs:subClassOf chebi:18420 . ?annotation20 faldo:begin ?pfsb21 ; faldo:end ?pfse22 ; up:ligand ?ligand23 ; rdf:type up:Binding_Site_Annotation . ?pfsb21 faldo:position ?thisPositionOn24 ; rdf:type faldo:ExactPosition . ?pfse22 faldo:position ?thisPositionOn25 ; rdf:type faldo:ExactPosition . ?ligand23 rdfs:subClassOf chebi:18420 . ?annotation26 faldo:begin ?pfsb27 ; faldo:end ?pfse28 ; up:ligand ?ligand29 ; rdf:type up:Binding_Site_Annotation . ?pfsb27 faldo:position ?thisPositionOn30 ; rdf:type faldo:ExactPosition . ?pfse28 faldo:position ?thisPositionOn31 ; rdf:type faldo:ExactPosition . ?ligand29 rdfs:subClassOf chebi:18420 . ?annotation32 faldo:begin ?pfsb33 ; faldo:end ?pfse34 ; up:ligand ?ligand35 ; rdf:type up:Binding_Site_Annotation . ?pfsb33 faldo:position ?thisPositionOn36 ; rdf:type faldo:ExactPosition . ?pfse34 faldo:position ?thisPositionOn37 ; rdf:type faldo:ExactPosition . ?ligand35 rdfs:subClassOf chebi:18420 . ?pfs38 up:annotation ?annotation39 . ?annotation39 faldo:begin ?pfsb40 ; faldo:end ?pfse41 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton donor/acceptor' . ?pfsb40 faldo:position ?thisPositionOn42 ; rdf:type faldo:ExactPosition . ?pfse41 faldo:position ?thisPositionOn43 ; rdf:type faldo:ExactPosition . ?pfs44 up:annotation ?annotation45 . ?annotation45 faldo:begin ?pfsb46 ; faldo:end ?pfse47 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for substrate binding and specificity' . ?pfsb46 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?pfse47 faldo:position ?thisPositionOn49 ; rdf:type faldo:ExactPosition . ?pfs50 up:annotation ?annotation51 . ?annotation51 faldo:begin ?pfsb52 ; faldo:end ?pfse53 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for substrate binding and specificity' . ?pfsb52 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse53 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for substrate binding and specificity' . ?pfsb58 faldo:position ?thisPositionOn60 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfs62 up:annotation ?annotation63 . ?annotation63 faldo:begin ?pfsb64 ; faldo:end ?pfse65 ; rdf:type up:Site_Annotation ; rdfs:comment 'Important for substrate binding and specificity' . ?pfsb64 faldo:position ?thisPositionOn66 ; rdf:type faldo:ExactPosition . ?pfse65 faldo:position ?thisPositionOn67 ; rdf:type faldo:ExactPosition . _:62499 a rdf:Statement ; up:attribution _:62474 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:62500 a rdf:Statement ; up:attribution _:62475 ; rdf:subject ?this ; rdf:predicate up:alternativeName ; rdf:object ?name1 . _:62501 a rdf:Statement ; up:attribution _:62476 ; rdf:subject ?gene2 ; rdf:predicate up:encodedBy ; rdf:object ?gene2 . _:62502 a rdf:Statement ; up:attribution _:62477 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:62503 a rdf:Statement ; up:attribution _:62478 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:62504 a rdf:Statement ; up:attribution _:62479 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:62505 a rdf:Statement ; up:attribution _:62480 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:269 . _:62506 a rdf:Statement ; up:attribution _:62481 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:62507 a rdf:Statement ; up:attribution _:62482 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:540 . _:62508 a rdf:Statement ; up:attribution _:62483 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:62509 a rdf:Statement ; up:attribution _:62484 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0016896 . _:62510 a rdf:Statement ; up:attribution _:62485 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0006396 . _:62511 a rdf:Statement ; up:attribution _:62486 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:460 . _:62512 a rdf:Statement ; up:attribution _:62487 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:62513 a rdf:Statement ; up:attribution _:62488 ; rdf:subject ?case6 ; rdf:predicate up:classifiedWith ; rdf:object GO:0000287 . _:62514 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:62515 a rdf:Statement ; up:attribution _:62489 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation8 . _:62516 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:62517 a rdf:Statement ; up:attribution _:62490 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation14 . _:62518 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:62519 a rdf:Statement ; up:attribution _:62491 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation20 . _:62520 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:62521 a rdf:Statement ; up:attribution _:62492 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation26 . _:62522 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:62523 a rdf:Statement ; up:attribution _:62493 ; rdf:subject ?pfs7 ; rdf:predicate up:annotation ; rdf:object ?annotation32 . _:62524 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:62525 a rdf:Statement ; up:attribution _:62494 ; rdf:subject ?pfs38 ; rdf:predicate up:annotation ; rdf:object ?annotation39 . _:62526 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:62527 a rdf:Statement ; up:attribution _:62495 ; rdf:subject ?pfs44 ; rdf:predicate up:annotation ; rdf:object ?annotation45 . _:62528 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:62529 a rdf:Statement ; up:attribution _:62496 ; rdf:subject ?pfs50 ; rdf:predicate up:annotation ; rdf:object ?annotation51 . _:62530 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:62531 a rdf:Statement ; up:attribution _:62497 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:62532 a rdf:Statement ; up:source unirule:MF_00157 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . _:62533 a rdf:Statement ; up:attribution _:62498 ; rdf:subject ?pfs62 ; rdf:predicate up:annotation ; rdf:object ?annotation63 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00157 #Rule MF_00157 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00157 . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(URI(CONCAT(STR(?this), '#MF_00157a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_00157a1')) AS ?name1) . BIND(URI(CONCAT(STR(?this), '#MF_00157a3')) AS ?annotation3) . BIND(URI(CONCAT(STR(?this), '#MF_00157a4')) AS ?annotation4) . BIND(URI(CONCAT(STR(?this), '#MF_00157a5')) AS ?annotation5) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch72 faldo:location ?templateMotifSequenceMatchRegionP3001473 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3001475 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP30014MF_0015768 . ?templateMotifSequenceMatchRegionP3001473 faldo:begin ?templateMotifSequenceMatchBeginP3001474 . ?templateMotifSequenceMatchBeginP3001474 faldo:position ?templateMotifSequenceMatchBeginPositionP3001469 ; faldo:reference isoform:P30014-1 . ?templateMotifSequenceProfileAlignmentOperationP3001475 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . ?targetMotifMatch76 faldo:location ?targetMotifMatchRegionMatch77 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0015779 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP30014MF_0015770 . ?targetMotifMatchRegionMatch77 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0015778 . ?targetMotifMatchRegionMatchBeginMF_0015778 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0015771 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0015779 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_0015768, 1, (STRLEN(?templateMotifCigarP30014MF_0015768) - STRLEN(REPLACE(?templateMotifCigarP30014MF_0015768, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP3001469) + 1)), '}'), '')))), '[a-z]', '')) AS ?step180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), '')))), '[^-]', ''))) AS ?step281) . BIND(((?step281 + ?targetMotifMatchRegionMatchBeginPositionMF_0015771) - 1) AS ?thisPositionOn12) . BIND(?thisPositionOn12 AS ?thisPositionOn13) . BIND(?this AS ?pfs1t82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfsb9) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn13))) AS ?pfse10) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn12, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_0015768, 1, (STRLEN(?templateMotifCigarP30014MF_0015768) - STRLEN(REPLACE(?templateMotifCigarP30014MF_0015768, CONCAT('^(?:-*[^-]){', STR(((23 - ?templateMotifSequenceMatchBeginPositionP3001469) + 1)), '}'), '')))), '[a-z]', '')) AS ?step183) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), '')))), '[^-]', ''))) AS ?step284) . BIND(((?step284 + ?targetMotifMatchRegionMatchBeginPositionMF_0015771) - 1) AS ?thisPositionOn18) . BIND(?thisPositionOn18 AS ?thisPositionOn19) . BIND(?this AS ?pfs1t85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_0015768, 1, (STRLEN(?templateMotifCigarP30014MF_0015768) - STRLEN(REPLACE(?templateMotifCigarP30014MF_0015768, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionP3001469) + 1)), '}'), '')))), '[a-z]', '')) AS ?step186) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), '')))), '[^-]', ''))) AS ?step287) . BIND(((?step287 + ?targetMotifMatchRegionMatchBeginPositionMF_0015771) - 1) AS ?thisPositionOn24) . BIND(?thisPositionOn24 AS ?thisPositionOn25) . BIND(?this AS ?pfs1t88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'E')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_0015768, 1, (STRLEN(?templateMotifCigarP30014MF_0015768) - STRLEN(REPLACE(?templateMotifCigarP30014MF_0015768, CONCAT('^(?:-*[^-]){', STR(((181 - ?templateMotifSequenceMatchBeginPositionP3001469) + 1)), '}'), '')))), '[a-z]', '')) AS ?step189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), '')))), '[^-]', ''))) AS ?step290) . BIND(((?step290 + ?targetMotifMatchRegionMatchBeginPositionMF_0015771) - 1) AS ?thisPositionOn30) . BIND(?thisPositionOn30 AS ?thisPositionOn31) . BIND(?this AS ?pfs1t91) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb27) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse28) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_0015768, 1, (STRLEN(?templateMotifCigarP30014MF_0015768) - STRLEN(REPLACE(?templateMotifCigarP30014MF_0015768, CONCAT('^(?:-*[^-]){', STR(((186 - ?templateMotifSequenceMatchBeginPositionP3001469) + 1)), '}'), '')))), '[a-z]', '')) AS ?step192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_0015770, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015770) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015770, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), '')))), '[^-]', ''))) AS ?step293) . BIND(((?step293 + ?targetMotifMatchRegionMatchBeginPositionMF_0015771) - 1) AS ?thisPositionOn36) . BIND(?thisPositionOn36 AS ?thisPositionOn37) . BIND(?this AS ?pfs1t94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb33) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse34) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'D')) . BIND(?this AS ?pfs7) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch99 faldo:location ?templateMotifSequenceMatchRegionP30014100 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP30014102 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP30014MF_0015795 . ?templateMotifSequenceMatchRegionP30014100 faldo:begin ?templateMotifSequenceMatchBeginP30014101 . ?templateMotifSequenceMatchBeginP30014101 faldo:position ?templateMotifSequenceMatchBeginPositionP3001496 ; faldo:reference isoform:P30014-1 . ?templateMotifSequenceProfileAlignmentOperationP30014102 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . ?targetMotifMatch103 faldo:location ?targetMotifMatchRegionMatch104 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00157106 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP30014MF_0015797 . ?targetMotifMatchRegionMatch104 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00157105 . ?targetMotifMatchRegionMatchBeginMF_00157105 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0015798 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00157106 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_0015795, 1, (STRLEN(?templateMotifCigarP30014MF_0015795) - STRLEN(REPLACE(?templateMotifCigarP30014MF_0015795, CONCAT('^(?:-*[^-]){', STR(((181 - ?templateMotifSequenceMatchBeginPositionP3001496) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_0015797, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015797) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015797, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_0015797, 1, (STRLEN(?targetMotifMatchCigarP30014MF_0015797) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_0015797, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0015798) - 1) AS ?thisPositionOn42) . BIND(?thisPositionOn42 AS ?thisPositionOn43) . BIND(?this AS ?pfs2t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb40) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse41) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_00157a39')) AS ?annotation39) . BIND(?this AS ?pfs38) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionP30014115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP30014117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP30014MF_00157110 . ?templateMotifSequenceMatchRegionP30014115 faldo:begin ?templateMotifSequenceMatchBeginP30014116 . ?templateMotifSequenceMatchBeginP30014116 faldo:position ?templateMotifSequenceMatchBeginPositionP30014111 ; faldo:reference isoform:P30014-1 . ?templateMotifSequenceProfileAlignmentOperationP30014117 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00157121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP30014MF_00157112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00157120 . ?targetMotifMatchRegionMatchBeginMF_00157120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00157113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00157121 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_00157110, 1, (STRLEN(?templateMotifCigarP30014MF_00157110) - STRLEN(REPLACE(?templateMotifCigarP30014MF_00157110, CONCAT('^(?:-*[^-]){', STR(((29 - ?templateMotifSequenceMatchBeginPositionP30014111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_00157112, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157112) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_00157112, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157112) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_00157113) - 1) AS ?thisPositionOn48) . BIND(?thisPositionOn48 AS ?thisPositionOn49) . BIND(?this AS ?pfs2t124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfsb46) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfse47) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn48, 1) = 'F')) . BIND(URI(CONCAT(STR(?this), '#MF_00157a45')) AS ?annotation45) . BIND(?this AS ?pfs44) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionP30014130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP30014132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP30014MF_00157125 . ?templateMotifSequenceMatchRegionP30014130 faldo:begin ?templateMotifSequenceMatchBeginP30014131 . ?templateMotifSequenceMatchBeginP30014131 faldo:position ?templateMotifSequenceMatchBeginPositionP30014126 ; faldo:reference isoform:P30014-1 . ?templateMotifSequenceProfileAlignmentOperationP30014132 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00157136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP30014MF_00157127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00157135 . ?targetMotifMatchRegionMatchBeginMF_00157135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00157128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00157136 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_00157125, 1, (STRLEN(?templateMotifCigarP30014MF_00157125) - STRLEN(REPLACE(?templateMotifCigarP30014MF_00157125, CONCAT('^(?:-*[^-]){', STR(((77 - ?templateMotifSequenceMatchBeginPositionP30014126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_00157127, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157127) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_00157127, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157127) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_00157128) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs2t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb52) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse53) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'F')) . BIND(URI(CONCAT(STR(?this), '#MF_00157a51')) AS ?annotation51) . BIND(?this AS ?pfs50) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch144 faldo:location ?templateMotifSequenceMatchRegionP30014145 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP30014147 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP30014MF_00157140 . ?templateMotifSequenceMatchRegionP30014145 faldo:begin ?templateMotifSequenceMatchBeginP30014146 . ?templateMotifSequenceMatchBeginP30014146 faldo:position ?templateMotifSequenceMatchBeginPositionP30014141 ; faldo:reference isoform:P30014-1 . ?templateMotifSequenceProfileAlignmentOperationP30014147 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . ?targetMotifMatch148 faldo:location ?targetMotifMatchRegionMatch149 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00157151 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP30014MF_00157142 . ?targetMotifMatchRegionMatch149 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00157150 . ?targetMotifMatchRegionMatchBeginMF_00157150 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00157143 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00157151 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_00157140, 1, (STRLEN(?templateMotifCigarP30014MF_00157140) - STRLEN(REPLACE(?templateMotifCigarP30014MF_00157140, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionP30014141) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_00157142, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157142) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_00157142, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157142) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) . BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_00157143) - 1) AS ?thisPositionOn60) . BIND(?thisPositionOn60 AS ?thisPositionOn61) . BIND(?this AS ?pfs2t154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse59) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'F')) . BIND(URI(CONCAT(STR(?this), '#MF_00157a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch159 faldo:location ?templateMotifSequenceMatchRegionP30014160 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP30014162 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP30014MF_00157155 . ?templateMotifSequenceMatchRegionP30014160 faldo:begin ?templateMotifSequenceMatchBeginP30014161 . ?templateMotifSequenceMatchBeginP30014161 faldo:position ?templateMotifSequenceMatchBeginPositionP30014156 ; faldo:reference isoform:P30014-1 . ?templateMotifSequenceProfileAlignmentOperationP30014162 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . ?targetMotifMatch163 faldo:location ?targetMotifMatchRegionMatch164 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00157166 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP30014MF_00157157 . ?targetMotifMatchRegionMatch164 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00157165 . ?targetMotifMatchRegionMatchBeginMF_00157165 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00157158 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00157166 edam:has_input signature:MF_00157 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP30014MF_00157155, 1, (STRLEN(?templateMotifCigarP30014MF_00157155) - STRLEN(REPLACE(?templateMotifCigarP30014MF_00157155, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionP30014156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP30014MF_00157157, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157157) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP30014MF_00157157, 1, (STRLEN(?targetMotifMatchCigarP30014MF_00157157) - STRLEN(REPLACE(?targetMotifMatchCigarP30014MF_00157157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), '')))), '[^-]', ''))) AS ?step2168) . BIND(((?step2168 + ?targetMotifMatchRegionMatchBeginPositionMF_00157158) - 1) AS ?thisPositionOn66) . BIND(?thisPositionOn66 AS ?thisPositionOn67) . BIND(?this AS ?pfs2t169) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb64) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse65) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn66, 1) = 'F')) . BIND(URI(CONCAT(STR(?this), '#MF_00157a63')) AS ?annotation63) . BIND(?this AS ?pfs62) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag170) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag170, ?UNBOUND_VARIABLE) AS ?case6) . } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00157 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00157#construct |