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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-175 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-180 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-181 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-117 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-118 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-115 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-139 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-116 |
| http://purl.uniprot.org/unirules/MF_00290#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00290#construct-template-119 |
| http://purl.uniprot.org/unirules/MF_00290#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00290#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00290#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00290#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00290#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00290#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:118584 up:source unirule:MF_00290 . _:118585 up:source unirule:MF_00290 . _:118586 up:source unirule:MF_00290 . _:118587 up:source unirule:MF_00290 . _:118588 up:source unirule:MF_00290 . _:118589 up:source unirule:MF_00290 . _:118590 up:source unirule:MF_00290 . _:118591 up:source unirule:MF_00290 . _:118592 up:source unirule:MF_00290 . _:118593 up:source unirule:MF_00290 . _:118594 up:source unirule:MF_00290 . _:118595 up:source unirule:MF_00290 . _:118596 up:source unirule:MF_00290 . _:118597 up:source unirule:MF_00290 . _:118598 up:source unirule:MF_00290 . _:118599 up:source unirule:MF_00290 . _:118600 up:source unirule:MF_00290 . _:118601 up:source unirule:MF_00290 . _:118602 up:source unirule:MF_00290 . _:118603 up:source unirule:MF_00290 . _:118604 up:source unirule:MF_00290 . _:118605 up:source unirule:MF_00290 . _:118606 up:source unirule:MF_00290 . _:118607 up:source unirule:MF_00290 . _:118608 up:source unirule:MF_00290 . _:118609 up:source unirule:MF_00290 . ?this up:annotation ?annotation1 ; up:classifiedWith GO:0030488 , GO:0160104 , keyword:489 , keyword:694 , keyword:808 , keyword:819 , keyword:820 , keyword:949 . ?gene0 skos:prefLabel 'trm1' . ?annotation1 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.' . ?case2 up:classifiedWith keyword:479 , keyword:862 . ?case3 up:alternativeName ?name5 , ?name6 , ?name7 ; up:recommendedName ?name4 . ?name4 up:ecName '2.1.1.216' ; up:fullName 'tRNA (guanine(26)-N(2))-dimethyltransferase' ; rdf:type up:Structured_Name . ?name5 up:fullName 'tRNA 2,2-dimethylguanosine-26 methyltransferase' ; rdf:type up:Structured_Name . ?name6 up:fullName 'tRNA(guanine-26,N(2)-N(2)) methyltransferase' ; rdf:type up:Structured_Name . ?name7 up:fullName 'tRNA(m(2,2)G26)dimethyltransferase' ; rdf:type up:Structured_Name . ?case8 up:recommendedName ?name9 . ?name9 up:ecName '2.1.1.215' ; up:fullName 'tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase' ; rdf:type up:Structured_Name . ?pfs10 up:annotation ?annotation11 , ?annotation17 , ?annotation23 , ?annotation29 . ?annotation11 faldo:begin ?pfsb12 ; faldo:end ?pfse13 ; up:ligand ?ligand14 ; rdf:type up:Binding_Site_Annotation . ?pfsb12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?pfse13 faldo:position ?thisPositionOn16 ; rdf:type faldo:ExactPosition . ?ligand14 rdfs:subClassOf chebi:29105 . ?annotation17 faldo:begin ?pfsb18 ; faldo:end ?pfse19 ; up:ligand ?ligand20 ; rdf:type up:Binding_Site_Annotation . ?pfsb18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?pfse19 faldo:position ?thisPositionOn22 ; rdf:type faldo:ExactPosition . ?ligand20 rdfs:subClassOf chebi:29105 . ?annotation23 faldo:begin ?pfsb24 ; faldo:end ?pfse25 ; up:ligand ?ligand26 ; rdf:type up:Binding_Site_Annotation . ?pfsb24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?pfse25 faldo:position ?thisPositionOn28 ; rdf:type faldo:ExactPosition . ?ligand26 rdfs:subClassOf chebi:29105 . ?annotation29 faldo:begin ?pfsb30 ; faldo:end ?pfse31 ; up:ligand ?ligand32 ; rdf:type up:Binding_Site_Annotation . ?pfsb30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?pfse31 faldo:position ?thisPositionOn34 ; rdf:type faldo:ExactPosition . ?ligand32 rdfs:subClassOf chebi:29105 . ?pfs35 up:annotation ?annotation36 . ?annotation36 faldo:begin ?pfsb37 ; faldo:end ?pfse38 ; up:ligand ?ligand39 ; rdf:type up:Binding_Site_Annotation . ?pfsb37 faldo:position ?thisPositionOn40 ; rdf:type faldo:ExactPosition . ?pfse38 faldo:position ?thisPositionOn41 ; rdf:type faldo:ExactPosition . ?ligand39 rdfs:subClassOf chebi:59789 . ?pfs42 up:annotation ?annotation43 . ?annotation43 faldo:begin ?pfsb44 ; faldo:end ?pfse45 ; up:ligand ?ligand46 ; rdf:type up:Binding_Site_Annotation . ?pfsb44 faldo:position ?thisPositionOn47 ; rdf:type faldo:ExactPosition . ?pfse45 faldo:position ?thisPositionOn48 ; rdf:type faldo:ExactPosition . ?ligand46 rdfs:subClassOf chebi:59789 . ?pfs49 up:annotation ?annotation50 . ?annotation50 faldo:begin ?pfsb51 ; faldo:end ?pfse52 ; up:ligand ?ligand53 ; rdf:type up:Binding_Site_Annotation . ?pfsb51 faldo:position ?thisPositionOn54 ; rdf:type faldo:ExactPosition . ?pfse52 faldo:position ?thisPositionOn55 ; rdf:type faldo:ExactPosition . ?ligand53 rdfs:subClassOf chebi:59789 . ?pfs56 up:annotation ?annotation57 . ?annotation57 faldo:begin ?pfsb58 ; faldo:end ?pfse59 ; up:ligand ?ligand60 ; rdf:type up:Binding_Site_Annotation . ?pfsb58 faldo:position ?thisPositionOn61 ; rdf:type faldo:ExactPosition . ?pfse59 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?ligand60 rdfs:subClassOf chebi:59789 . ?pfs63 up:annotation ?annotation64 . ?annotation64 faldo:begin ?pfsb65 ; faldo:end ?pfse66 ; up:ligand ?ligand67 ; rdf:type up:Binding_Site_Annotation . ?pfsb65 faldo:position ?thisPositionOn68 ; rdf:type faldo:ExactPosition . ?pfse66 faldo:position ?thisPositionOn69 ; rdf:type faldo:ExactPosition . ?ligand67 rdfs:subClassOf chebi:59789 . _:118610 a rdf:Statement ; up:attribution _:118584 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:118611 a rdf:Statement ; up:attribution _:118585 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:118612 a rdf:Statement ; up:attribution _:118586 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:489 . _:118613 a rdf:Statement ; up:attribution _:118587 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:694 . _:118614 a rdf:Statement ; up:attribution _:118588 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:949 . _:118615 a rdf:Statement ; up:attribution _:118589 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:808 . _:118616 a rdf:Statement ; up:attribution _:118590 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:118617 a rdf:Statement ; up:attribution _:118591 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:820 . _:118618 a rdf:Statement ; up:attribution _:118592 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0160104 . _:118619 a rdf:Statement ; up:attribution _:118593 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0030488 . _:118620 a rdf:Statement ; up:attribution _:118594 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:118621 a rdf:Statement ; up:attribution _:118595 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:118622 a rdf:Statement ; up:attribution _:118596 ; rdf:subject ?case3 ; rdf:predicate up:recommendedName ; rdf:object ?name4 . _:118623 a rdf:Statement ; up:attribution _:118597 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name5 . _:118624 a rdf:Statement ; up:attribution _:118598 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name6 . _:118625 a rdf:Statement ; up:attribution _:118599 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name7 . _:118626 a rdf:Statement ; up:attribution _:118600 ; rdf:subject ?case8 ; rdf:predicate up:recommendedName ; rdf:object ?name9 . _:118627 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:118628 a rdf:Statement ; up:attribution _:118601 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation11 . _:118629 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:118630 a rdf:Statement ; up:attribution _:118602 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation17 . _:118631 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:118632 a rdf:Statement ; up:attribution _:118603 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation23 . _:118633 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:118634 a rdf:Statement ; up:attribution _:118604 ; rdf:subject ?pfs10 ; rdf:predicate up:annotation ; rdf:object ?annotation29 . _:118635 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:118636 a rdf:Statement ; up:attribution _:118605 ; rdf:subject ?pfs35 ; rdf:predicate up:annotation ; rdf:object ?annotation36 . _:118637 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:118638 a rdf:Statement ; up:attribution _:118606 ; rdf:subject ?pfs42 ; rdf:predicate up:annotation ; rdf:object ?annotation43 . _:118639 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:118640 a rdf:Statement ; up:attribution _:118607 ; rdf:subject ?pfs49 ; rdf:predicate up:annotation ; rdf:object ?annotation50 . _:118641 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:118642 a rdf:Statement ; up:attribution _:118608 ; rdf:subject ?pfs56 ; rdf:predicate up:annotation ; rdf:object ?annotation57 . _:118643 a rdf:Statement ; up:source unirule:MF_00290 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . _:118644 a rdf:Statement ; up:attribution _:118609 ; rdf:subject ?pfs63 ; rdf:predicate up:annotation ; rdf:object ?annotation64 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00290 #Rule MF_00290 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-02-11 VALUES ?supertaxon70 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00290 . ?thisOrganism rdfs:subClassOf+ ?supertaxon70 . BIND(URI(CONCAT(STR(?this), '#MF_00290a1')) AS ?annotation1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch75 faldo:location ?templateMotifSequenceMatchRegionO6701076 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO6701078 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO67010MF_0029071 . ?templateMotifSequenceMatchRegionO6701076 faldo:begin ?templateMotifSequenceMatchBeginO6701077 . ?templateMotifSequenceMatchBeginO6701077 faldo:position ?templateMotifSequenceMatchBeginPositionO6701072 ; faldo:reference isoform:O67010-1 . ?templateMotifSequenceProfileAlignmentOperationO6701078 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . ?targetMotifMatch79 faldo:location ?targetMotifMatchRegionMatch80 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0029082 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO67010MF_0029073 . ?targetMotifMatchRegionMatch80 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0029081 . ?targetMotifMatchRegionMatchBeginMF_0029081 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0029074 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0029082 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_0029071, 1, (STRLEN(?templateMotifCigarO67010MF_0029071) - STRLEN(REPLACE(?templateMotifCigarO67010MF_0029071, CONCAT('^(?:-*[^-]){', STR(((247 - ?templateMotifSequenceMatchBeginPositionO6701072) + 1)), '}'), '')))), '[a-z]', '')) AS ?step183) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), '')))), '[^-]', ''))) AS ?step284) . BIND(((?step284 + ?targetMotifMatchRegionMatchBeginPositionMF_0029074) - 1) AS ?thisPositionOn15) . BIND(?thisPositionOn15 AS ?thisPositionOn16) . BIND(?this AS ?pfs1t85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfsb12) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfse13) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn15, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_0029071, 1, (STRLEN(?templateMotifCigarO67010MF_0029071) - STRLEN(REPLACE(?templateMotifCigarO67010MF_0029071, CONCAT('^(?:-*[^-]){', STR(((250 - ?templateMotifSequenceMatchBeginPositionO6701072) + 1)), '}'), '')))), '[a-z]', '')) AS ?step186) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), '')))), '[^-]', ''))) AS ?step287) . BIND(((?step287 + ?targetMotifMatchRegionMatchBeginPositionMF_0029074) - 1) AS ?thisPositionOn21) . BIND(?thisPositionOn21 AS ?thisPositionOn22) . BIND(?this AS ?pfs1t88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfsb18) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfse19) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn21, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_0029071, 1, (STRLEN(?templateMotifCigarO67010MF_0029071) - STRLEN(REPLACE(?templateMotifCigarO67010MF_0029071, CONCAT('^(?:-*[^-]){', STR(((266 - ?templateMotifSequenceMatchBeginPositionO6701072) + 1)), '}'), '')))), '[a-z]', '')) AS ?step189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), '')))), '[^-]', ''))) AS ?step290) . BIND(((?step290 + ?targetMotifMatchRegionMatchBeginPositionMF_0029074) - 1) AS ?thisPositionOn27) . BIND(?thisPositionOn27 AS ?thisPositionOn28) . BIND(?this AS ?pfs1t91) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfsb24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfse25) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn27, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_0029071, 1, (STRLEN(?templateMotifCigarO67010MF_0029071) - STRLEN(REPLACE(?templateMotifCigarO67010MF_0029071, CONCAT('^(?:-*[^-]){', STR(((269 - ?templateMotifSequenceMatchBeginPositionO6701072) + 1)), '}'), '')))), '[a-z]', '')) AS ?step192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_0029073, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029073) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029073, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), '')))), '[^-]', ''))) AS ?step293) . BIND(((?step293 + ?targetMotifMatchRegionMatchBeginPositionMF_0029074) - 1) AS ?thisPositionOn33) . BIND(?thisPositionOn33 AS ?thisPositionOn34) . BIND(?this AS ?pfs1t94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfsb30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfse31) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn33, 1) = 'C')) . BIND(?this AS ?pfs10) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch99 faldo:location ?templateMotifSequenceMatchRegionO67010100 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO67010102 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO67010MF_0029095 . ?templateMotifSequenceMatchRegionO67010100 faldo:begin ?templateMotifSequenceMatchBeginO67010101 . ?templateMotifSequenceMatchBeginO67010101 faldo:position ?templateMotifSequenceMatchBeginPositionO6701096 ; faldo:reference isoform:O67010-1 . ?templateMotifSequenceProfileAlignmentOperationO67010102 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . ?targetMotifMatch103 faldo:location ?targetMotifMatchRegionMatch104 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00290106 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO67010MF_0029097 . ?targetMotifMatchRegionMatch104 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00290105 . ?targetMotifMatchRegionMatchBeginMF_00290105 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0029098 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00290106 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_0029095, 1, (STRLEN(?templateMotifCigarO67010MF_0029095) - STRLEN(REPLACE(?templateMotifCigarO67010MF_0029095, CONCAT('^(?:-*[^-]){', STR(((36 - ?templateMotifSequenceMatchBeginPositionO6701096) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1107) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_0029097, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029097) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029097, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_0029097, 1, (STRLEN(?targetMotifMatchCigarO67010MF_0029097) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_0029097, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1107), '}'), '')))), '[^-]', ''))) AS ?step2108) . BIND(((?step2108 + ?targetMotifMatchRegionMatchBeginPositionMF_0029098) - 1) AS ?thisPositionOn40) . BIND(?thisPositionOn40 AS ?thisPositionOn41) . BIND(?this AS ?pfs2t109) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb37) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse38) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00290a36')) AS ?annotation36) . BIND(?this AS ?pfs35) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionO67010115 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO67010117 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO67010MF_00290110 . ?templateMotifSequenceMatchRegionO67010115 faldo:begin ?templateMotifSequenceMatchBeginO67010116 . ?templateMotifSequenceMatchBeginO67010116 faldo:position ?templateMotifSequenceMatchBeginPositionO67010111 ; faldo:reference isoform:O67010-1 . ?templateMotifSequenceProfileAlignmentOperationO67010117 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . ?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00290121 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO67010MF_00290112 . ?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00290120 . ?targetMotifMatchRegionMatchBeginMF_00290120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00290113 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00290121 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_00290110, 1, (STRLEN(?templateMotifCigarO67010MF_00290110) - STRLEN(REPLACE(?templateMotifCigarO67010MF_00290110, CONCAT('^(?:-*[^-]){', STR(((66 - ?templateMotifSequenceMatchBeginPositionO67010111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_00290112, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290112) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_00290112, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290112) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) . BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_00290113) - 1) AS ?thisPositionOn47) . BIND(?thisPositionOn47 AS ?thisPositionOn48) . BIND(?this AS ?pfs2t124) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb44) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse45) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'R')) . BIND(URI(CONCAT(STR(?this), '#MF_00290a43')) AS ?annotation43) . BIND(?this AS ?pfs42) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch129 faldo:location ?templateMotifSequenceMatchRegionO67010130 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO67010132 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO67010MF_00290125 . ?templateMotifSequenceMatchRegionO67010130 faldo:begin ?templateMotifSequenceMatchBeginO67010131 . ?templateMotifSequenceMatchBeginO67010131 faldo:position ?templateMotifSequenceMatchBeginPositionO67010126 ; faldo:reference isoform:O67010-1 . ?templateMotifSequenceProfileAlignmentOperationO67010132 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . ?targetMotifMatch133 faldo:location ?targetMotifMatchRegionMatch134 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00290136 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO67010MF_00290127 . ?targetMotifMatchRegionMatch134 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00290135 . ?targetMotifMatchRegionMatchBeginMF_00290135 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00290128 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00290136 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_00290125, 1, (STRLEN(?templateMotifCigarO67010MF_00290125) - STRLEN(REPLACE(?templateMotifCigarO67010MF_00290125, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionO67010126) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_00290127, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290127) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_00290127, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290127) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290127, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) . BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_00290128) - 1) AS ?thisPositionOn54) . BIND(?thisPositionOn54 AS ?thisPositionOn55) . BIND(?this AS ?pfs2t139) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) . FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00290a50')) AS ?annotation50) . BIND(?this AS ?pfs49) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch144 faldo:location ?templateMotifSequenceMatchRegionO67010145 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO67010147 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO67010MF_00290140 . ?templateMotifSequenceMatchRegionO67010145 faldo:begin ?templateMotifSequenceMatchBeginO67010146 . ?templateMotifSequenceMatchBeginO67010146 faldo:position ?templateMotifSequenceMatchBeginPositionO67010141 ; faldo:reference isoform:O67010-1 . ?templateMotifSequenceProfileAlignmentOperationO67010147 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . ?targetMotifMatch148 faldo:location ?targetMotifMatchRegionMatch149 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00290151 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO67010MF_00290142 . ?targetMotifMatchRegionMatch149 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00290150 . ?targetMotifMatchRegionMatchBeginMF_00290150 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00290143 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00290151 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_00290140, 1, (STRLEN(?templateMotifCigarO67010MF_00290140) - STRLEN(REPLACE(?templateMotifCigarO67010MF_00290140, CONCAT('^(?:-*[^-]){', STR(((113 - ?templateMotifSequenceMatchBeginPositionO67010141) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_00290142, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290142) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_00290142, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290142) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) . BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_00290143) - 1) AS ?thisPositionOn61) . BIND(?thisPositionOn61 AS ?thisPositionOn62) . BIND(?this AS ?pfs2t154) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) . FILTER (REGEX('[ED]', SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1))) . BIND(URI(CONCAT(STR(?this), '#MF_00290a57')) AS ?annotation57) . BIND(?this AS ?pfs56) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch159 faldo:location ?templateMotifSequenceMatchRegionO67010160 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationO67010162 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarO67010MF_00290155 . ?templateMotifSequenceMatchRegionO67010160 faldo:begin ?templateMotifSequenceMatchBeginO67010161 . ?templateMotifSequenceMatchBeginO67010161 faldo:position ?templateMotifSequenceMatchBeginPositionO67010156 ; faldo:reference isoform:O67010-1 . ?templateMotifSequenceProfileAlignmentOperationO67010162 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . ?targetMotifMatch163 faldo:location ?targetMotifMatchRegionMatch164 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00290166 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarO67010MF_00290157 . ?targetMotifMatchRegionMatch164 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00290165 . ?targetMotifMatchRegionMatchBeginMF_00290165 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00290158 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_00290166 edam:has_input signature:MF_00290 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarO67010MF_00290155, 1, (STRLEN(?templateMotifCigarO67010MF_00290155) - STRLEN(REPLACE(?templateMotifCigarO67010MF_00290155, CONCAT('^(?:-*[^-]){', STR(((114 - ?templateMotifSequenceMatchBeginPositionO67010156) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1167) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarO67010MF_00290157, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290157) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarO67010MF_00290157, 1, (STRLEN(?targetMotifMatchCigarO67010MF_00290157) - STRLEN(REPLACE(?targetMotifMatchCigarO67010MF_00290157, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1167), '}'), '')))), '[^-]', ''))) AS ?step2168) . BIND(((?step2168 + ?targetMotifMatchRegionMatchBeginPositionMF_00290158) - 1) AS ?thisPositionOn68) . BIND(?thisPositionOn68 AS ?thisPositionOn69) . BIND(?this AS ?pfs2t169) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'A')) . BIND(URI(CONCAT(STR(?this), '#MF_00290a64')) AS ?annotation64) . BIND(?this AS ?pfs63) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag170) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag170, ?UNBOUND_VARIABLE) AS ?case2) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(?this AS ?case3) . BIND(URI(CONCAT(STR(?this), '#MF_00290a4')) AS ?name4) . BIND(URI(CONCAT(STR(?this), '#MF_00290a5')) AS ?name5) . BIND(URI(CONCAT(STR(?this), '#MF_00290a6')) AS ?name6) . BIND(URI(CONCAT(STR(?this), '#MF_00290a7')) AS ?name7) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:2 . BIND(?this AS ?case8) . BIND(URI(CONCAT(STR(?this), '#MF_00290a9')) AS ?name9) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_00290 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00290#construct |