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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-141 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-165 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-109 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-108 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-107 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-106 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-105 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-129 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-104 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-128 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-103 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-126 |
| http://purl.uniprot.org/unirules/MF_01818#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01818#construct-template-102 |
| http://purl.uniprot.org/unirules/MF_01818#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01818#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01818#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01818#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01818#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01818#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:637605 up:source unirule:MF_01818 . _:637606 up:source unirule:MF_01818 . _:637607 up:source unirule:MF_01818 . _:637608 up:source unirule:MF_01818 . _:637609 up:source unirule:MF_01818 . _:637610 up:source unirule:MF_01818 . _:637611 up:source unirule:MF_01818 . _:637612 up:source unirule:MF_01818 . _:637613 up:source unirule:MF_01818 . _:637614 up:source unirule:MF_01818 . _:637615 up:source unirule:MF_01818 . _:637616 up:source unirule:MF_01818 . _:637617 up:source unirule:MF_01818 . _:637618 up:source unirule:MF_01818 . _:637619 up:source unirule:MF_01818 . _:637620 up:source unirule:MF_01818 . _:637621 up:source unirule:MF_01818 . _:637622 up:source unirule:MF_01818 . _:637623 up:source unirule:MF_01818 . _:637624 up:source unirule:MF_01818 . _:637625 up:source unirule:MF_01818 . _:637626 up:source unirule:MF_01818 . _:637627 up:source unirule:MF_01818 . _:637628 up:source unirule:MF_01818 . _:637629 up:source unirule:MF_01818 . _:637630 up:source unirule:MF_01818 . _:637631 up:source unirule:MF_01818 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0008033 , keyword:255 , keyword:378 , keyword:540 , keyword:819 . ?annotation0 a up:Subunit_Annotation ; rdfs:comment 'Homodimer.' . ?case1 up:classifiedWith GO:0008270 , keyword:479 , keyword:862 . ?case2 up:alternativeName ?name4 ; up:classifiedWith GO:0004519 , GO:0004527 , keyword:269 ; up:recommendedName ?name3 . ?name3 up:ecName '3.1.-.-' ; up:fullName 'Ribonuclease BN' ; up:shortName 'RNase BN' ; rdf:type up:Structured_Name . ?name4 up:fullName 'Ribonuclease Z homolog' ; up:shortName 'RNase Z homolog' ; rdf:type up:Structured_Name . ?case5 up:alternativeName ?name7 , ?name8 ; up:classifiedWith GO:0042781 ; up:recommendedName ?name6 . ?name6 up:ecName '3.1.26.11' ; up:fullName 'Ribonuclease Z' ; up:shortName 'RNase Z' ; rdf:type up:Structured_Name . ?name7 up:fullName 'tRNA 3 endonuclease' ; rdf:type up:Structured_Name . ?name8 up:fullName 'tRNase Z' ; rdf:type up:Structured_Name . ?pfs9 up:annotation ?annotation10 , ?annotation16 , ?annotation22 , ?annotation28 , ?annotation34 , ?annotation40 , ?annotation46 , ?annotation52 . ?annotation10 faldo:begin ?pfsb11 ; faldo:end ?pfse12 ; up:ligand ?ligand13 ; rdf:type up:Binding_Site_Annotation . ?pfsb11 faldo:position ?thisPositionOn14 ; rdf:type faldo:ExactPosition . ?pfse12 faldo:position ?thisPositionOn15 ; rdf:type faldo:ExactPosition . ?ligand13 rdfs:subClassOf chebi:29105 . ?annotation16 faldo:begin ?pfsb17 ; faldo:end ?pfse18 ; up:ligand ?ligand19 ; rdf:type up:Binding_Site_Annotation . ?pfsb17 faldo:position ?thisPositionOn20 ; rdf:type faldo:ExactPosition . ?pfse18 faldo:position ?thisPositionOn21 ; rdf:type faldo:ExactPosition . ?ligand19 rdfs:subClassOf chebi:29105 . ?annotation22 faldo:begin ?pfsb23 ; faldo:end ?pfse24 ; up:ligand ?ligand25 ; rdf:type up:Binding_Site_Annotation . ?pfsb23 faldo:position ?thisPositionOn26 ; rdf:type faldo:ExactPosition . ?pfse24 faldo:position ?thisPositionOn27 ; rdf:type faldo:ExactPosition . ?ligand25 rdfs:subClassOf chebi:29105 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf chebi:29105 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf chebi:29105 . ?annotation40 faldo:begin ?pfsb41 ; faldo:end ?pfse42 ; up:ligand ?ligand43 ; rdf:type up:Binding_Site_Annotation . ?pfsb41 faldo:position ?thisPositionOn44 ; rdf:type faldo:ExactPosition . ?pfse42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?ligand43 rdfs:subClassOf chebi:29105 . ?annotation46 faldo:begin ?pfsb47 ; faldo:end ?pfse48 ; up:ligand ?ligand49 ; rdf:type up:Binding_Site_Annotation . ?pfsb47 faldo:position ?thisPositionOn50 ; rdf:type faldo:ExactPosition . ?pfse48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?ligand49 rdfs:subClassOf chebi:29105 . ?annotation52 faldo:begin ?pfsb53 ; faldo:end ?pfse54 ; up:ligand ?ligand55 ; rdf:type up:Binding_Site_Annotation . ?pfsb53 faldo:position ?thisPositionOn56 ; rdf:type faldo:ExactPosition . ?pfse54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?ligand55 rdfs:subClassOf chebi:29105 . ?pfs58 up:annotation ?annotation59 . ?annotation59 faldo:begin ?pfsb60 ; faldo:end ?pfse61 ; rdf:type up:Active_Site_Annotation ; rdfs:comment 'Proton acceptor' . ?pfsb60 faldo:position ?thisPositionOn62 ; rdf:type faldo:ExactPosition . ?pfse61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . _:637632 a rdf:Statement ; up:attribution _:637605 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:637633 a rdf:Statement ; up:attribution _:637606 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:819 . _:637634 a rdf:Statement ; up:attribution _:637607 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:637635 a rdf:Statement ; up:attribution _:637608 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:540 . _:637636 a rdf:Statement ; up:attribution _:637609 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:255 . _:637637 a rdf:Statement ; up:attribution _:637610 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0008033 . _:637638 a rdf:Statement ; up:attribution _:637611 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:637639 a rdf:Statement ; up:attribution _:637612 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:637640 a rdf:Statement ; up:attribution _:637613 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object GO:0008270 . _:637641 a rdf:Statement ; up:attribution _:637614 ; rdf:subject ?case2 ; rdf:predicate up:recommendedName ; rdf:object ?name3 . _:637642 a rdf:Statement ; up:attribution _:637615 ; rdf:subject ?case2 ; rdf:predicate up:alternativeName ; rdf:object ?name4 . _:637643 a rdf:Statement ; up:attribution _:637616 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:269 . _:637644 a rdf:Statement ; up:attribution _:637617 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object GO:0004519 . _:637645 a rdf:Statement ; up:attribution _:637618 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object GO:0004527 . _:637646 a rdf:Statement ; up:attribution _:637619 ; rdf:subject ?case5 ; rdf:predicate up:recommendedName ; rdf:object ?name6 . _:637647 a rdf:Statement ; up:attribution _:637620 ; rdf:subject ?case5 ; rdf:predicate up:alternativeName ; rdf:object ?name7 . _:637648 a rdf:Statement ; up:attribution _:637621 ; rdf:subject ?case5 ; rdf:predicate up:alternativeName ; rdf:object ?name8 . _:637649 a rdf:Statement ; up:attribution _:637622 ; rdf:subject ?case5 ; rdf:predicate up:classifiedWith ; rdf:object GO:0042781 . _:637650 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:637651 a rdf:Statement ; up:attribution _:637623 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation10 . _:637652 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:637653 a rdf:Statement ; up:attribution _:637624 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation16 . _:637654 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:637655 a rdf:Statement ; up:attribution _:637625 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation22 . _:637656 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:637657 a rdf:Statement ; up:attribution _:637626 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:637658 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:637659 a rdf:Statement ; up:attribution _:637627 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:637660 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:637661 a rdf:Statement ; up:attribution _:637628 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation40 . _:637662 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:637663 a rdf:Statement ; up:attribution _:637629 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation46 . _:637664 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:637665 a rdf:Statement ; up:attribution _:637630 ; rdf:subject ?pfs9 ; rdf:predicate up:annotation ; rdf:object ?annotation52 . _:637666 a rdf:Statement ; up:source unirule:MF_01818 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . _:637667 a rdf:Statement ; up:attribution _:637631 ; rdf:subject ?pfs58 ; rdf:predicate up:annotation ; rdf:object ?annotation59 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01818 #Rule MF_01818 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01 VALUES ?supertaxon64 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01818 . ?thisOrganism rdfs:subClassOf+ ?supertaxon64 . BIND(URI(CONCAT(STR(?this), '#MF_01818a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch69 faldo:location ?templateMotifSequenceMatchRegionP5454870 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP5454872 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP54548MF_0181865 . ?templateMotifSequenceMatchRegionP5454870 faldo:begin ?templateMotifSequenceMatchBeginP5454871 . ?templateMotifSequenceMatchBeginP5454871 faldo:position ?templateMotifSequenceMatchBeginPositionP5454866 ; faldo:reference isoform:P54548-1 . ?templateMotifSequenceProfileAlignmentOperationP5454872 edam:has_input signature:MF_01818 ; rdf:type edam:operation_0300 . ?targetMotifMatch73 faldo:location ?targetMotifMatchRegionMatch74 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0181876 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP54548MF_0181867 . ?targetMotifMatchRegionMatch74 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0181875 . ?targetMotifMatchRegionMatchBeginMF_0181875 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0181868 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0181876 edam:has_input signature:MF_01818 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((63 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step177) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), '')))), '[^-]', ''))) AS ?step278) . BIND(((?step278 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn14) . BIND(?thisPositionOn14 AS ?thisPositionOn15) . BIND(?this AS ?pfs1t79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb11) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse12) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn14, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((65 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), '')))), '[^-]', ''))) AS ?step281) . BIND(((?step281 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn20) . BIND(?thisPositionOn20 AS ?thisPositionOn21) . BIND(?this AS ?pfs1t82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb17) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse18) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn20, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((67 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step183) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step183), '}'), '')))), '[^-]', ''))) AS ?step284) . BIND(((?step284 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn26) . BIND(?thisPositionOn26 AS ?thisPositionOn27) . BIND(?this AS ?pfs1t85) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((68 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step186) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step186), '}'), '')))), '[^-]', ''))) AS ?step287) . BIND(((?step287 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn32) . BIND(?thisPositionOn32 AS ?thisPositionOn33) . BIND(?this AS ?pfs1t88) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((140 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step189) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step189), '}'), '')))), '[^-]', ''))) AS ?step290) . BIND(((?step290 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn38) . BIND(?thisPositionOn38 AS ?thisPositionOn39) . BIND(?this AS ?pfs1t91) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1) = 'H')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((211 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step192) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step192), '}'), '')))), '[^-]', ''))) AS ?step293) . BIND(((?step293 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn44) . BIND(?thisPositionOn44 AS ?thisPositionOn45) . BIND(?this AS ?pfs1t94) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((211 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), '')))), '[^-]', ''))) AS ?step296) . BIND(((?step296 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn50) . BIND(?thisPositionOn50 AS ?thisPositionOn51) . BIND(?this AS ?pfs1t97) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb47) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse48) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn50, 1) = 'D')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_0181865, 1, (STRLEN(?templateMotifCigarP54548MF_0181865) - STRLEN(REPLACE(?templateMotifCigarP54548MF_0181865, CONCAT('^(?:-*[^-]){', STR(((269 - ?templateMotifSequenceMatchBeginPositionP5454866) + 1)), '}'), '')))), '[a-z]', '')) AS ?step198) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_0181867, 1, (STRLEN(?targetMotifMatchCigarP54548MF_0181867) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_0181867, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step198), '}'), '')))), '[^-]', ''))) AS ?step299) . BIND(((?step299 + ?targetMotifMatchRegionMatchBeginPositionMF_0181868) - 1) AS ?thisPositionOn56) . BIND(?thisPositionOn56 AS ?thisPositionOn57) . BIND(?this AS ?pfs1t100) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb53) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse54) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn56, 1) = 'H')) . BIND(?this AS ?pfs9) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch105 faldo:location ?templateMotifSequenceMatchRegionP54548106 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP54548108 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP54548MF_01818101 . ?templateMotifSequenceMatchRegionP54548106 faldo:begin ?templateMotifSequenceMatchBeginP54548107 . ?templateMotifSequenceMatchBeginP54548107 faldo:position ?templateMotifSequenceMatchBeginPositionP54548102 ; faldo:reference isoform:P54548-1 . ?templateMotifSequenceProfileAlignmentOperationP54548108 edam:has_input signature:MF_01818 ; rdf:type edam:operation_0300 . ?targetMotifMatch109 faldo:location ?targetMotifMatchRegionMatch110 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01818112 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP54548MF_01818103 . ?targetMotifMatchRegionMatch110 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01818111 . ?targetMotifMatchRegionMatchBeginMF_01818111 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01818104 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_01818112 edam:has_input signature:MF_01818 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP54548MF_01818101, 1, (STRLEN(?templateMotifCigarP54548MF_01818101) - STRLEN(REPLACE(?templateMotifCigarP54548MF_01818101, CONCAT('^(?:-*[^-]){', STR(((67 - ?templateMotifSequenceMatchBeginPositionP54548102) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1113) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP54548MF_01818103, 1, (STRLEN(?targetMotifMatchCigarP54548MF_01818103) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_01818103, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1113), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP54548MF_01818103, 1, (STRLEN(?targetMotifMatchCigarP54548MF_01818103) - STRLEN(REPLACE(?targetMotifMatchCigarP54548MF_01818103, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1113), '}'), '')))), '[^-]', ''))) AS ?step2114) . BIND(((?step2114 + ?targetMotifMatchRegionMatchBeginPositionMF_01818104) - 1) AS ?thisPositionOn62) . BIND(?thisPositionOn62 AS ?thisPositionOn63) . BIND(?this AS ?pfs2t115) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb60) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse61) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn62, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_01818a59')) AS ?annotation59) . BIND(?this AS ?pfs58) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag116) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag116, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:91347 . BIND(?this AS ?case2) . BIND(URI(CONCAT(STR(?this), '#MF_01818a3')) AS ?name3) . BIND(URI(CONCAT(STR(?this), '#MF_01818a4')) AS ?name4) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:91347 . })) . BIND(?this AS ?case5) . BIND(URI(CONCAT(STR(?this), '#MF_01818a6')) AS ?name6) . BIND(URI(CONCAT(STR(?this), '#MF_01818a7')) AS ?name7) . BIND(URI(CONCAT(STR(?this), '#MF_01818a8')) AS ?name8) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_01818 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01818#construct |