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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-144 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-117 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-118 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-165 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-142 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-185 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-148 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-163 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-149 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-168 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-161 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-164 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-166 |
| http://purl.uniprot.org/unirules/MF_03112#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_03112#construct-template-170 |
| http://purl.uniprot.org/unirules/MF_03112#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_03112#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_03112#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_03112#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_03112#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_03112#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT { _:820015 up:source unirule:MF_03112 . _:820016 up:source unirule:MF_03112 . _:820017 up:source unirule:MF_03112 . _:820018 up:source unirule:MF_03112 . _:820019 up:source unirule:MF_03112 . _:820020 up:source unirule:MF_03112 . _:820021 up:source unirule:MF_03112 . _:820022 up:source unirule:MF_03112 . _:820023 up:source unirule:MF_03112 . _:820024 up:source unirule:MF_03112 . _:820025 up:source unirule:MF_03112 . _:820026 up:source unirule:MF_03112 . _:820027 up:source unirule:MF_03112 . _:820028 up:source unirule:MF_03112 . _:820029 up:source unirule:MF_03112 . _:820030 up:source unirule:MF_03112 . _:820031 up:source unirule:MF_03112 . _:820032 up:source unirule:MF_03112 . _:820033 up:source unirule:MF_03112 . _:820034 up:source unirule:MF_03112 . _:820035 up:source unirule:MF_03112 . _:820036 up:source unirule:MF_03112 . _:820037 up:source unirule:MF_03112 . _:820038 up:source unirule:MF_03112 . _:820039 up:source unirule:MF_03112 . _:820040 up:source unirule:MF_03112 . _:820041 up:source unirule:MF_03112 . _:820042 up:source unirule:MF_03112 . _:820043 up:source unirule:MF_03112 . _:820044 up:source unirule:MF_03112 . _:820045 up:source unirule:MF_03112 . _:820046 up:source unirule:MF_03112 . _:820047 up:source unirule:MF_03112 . _:820048 up:source unirule:MF_03112 . ?this up:annotation ?annotation0 ; up:classifiedWith GO:0005524 , GO:0045048 , keyword:256 , keyword:378 , keyword:813 , keyword:963 . ?annotation0 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the arsA ATPase family.' . ?case1 up:classifiedWith keyword:479 , keyword:862 . ?case2 up:classifiedWith keyword:547 , keyword:67 . ?case3 up:alternativeName ?name6 , ?name7 , ?name8 , ?name9 ; up:recommendedName ?name4 . ?name4 up:ecName '3.6.-.-' ; up:fullName ?nameValue5 ; rdf:type up:Structured_Name . ?name6 up:fullName 'Arsenical pump-driving ATPase' ; rdf:type up:Structured_Name . ?name7 up:fullName 'Arsenite-stimulated ATPase' ; rdf:type up:Structured_Name . ?name8 up:fullName 'Golgi to ER traffic protein 3' ; rdf:type up:Structured_Name . ?name9 up:fullName 'Guided entry of tail-anchored proteins 3' ; rdf:type up:Structured_Name . ?case10 up:classifiedWith keyword:539 . ?case12 up:classifiedWith GO:0043529 , keyword:333 , keyword:59 , keyword:931 . ?case15 up:classifiedWith GO:0005783 . ?case18 up:alternativeName ?name21 , ?name22 ; up:recommendedName ?name19 . ?name19 up:ecName '3.6.-.-' ; up:fullName ?nameValue20 ; rdf:type up:Structured_Name . ?name21 up:fullName 'Arsenical pump-driving ATPase' ; rdf:type up:Structured_Name . ?name22 up:fullName 'Arsenite-stimulated ATPase' ; rdf:type up:Structured_Name . ?case23 up:alternativeName ?name25 , ?name26 ; up:recommendedName ?name24 . ?name24 up:ecName '3.6.-.-' ; up:fullName 'ATPase ASNA1 homolog' ; rdf:type up:Structured_Name . ?name25 up:fullName 'Arsenical pump-driving ATPase homolog' ; rdf:type up:Structured_Name . ?name26 up:fullName 'Arsenite-stimulated ATPase' ; rdf:type up:Structured_Name . ?pfs27 up:annotation ?annotation28 , ?annotation34 . ?annotation28 faldo:begin ?pfsb29 ; faldo:end ?pfse30 ; up:ligand ?ligand31 ; rdf:type up:Binding_Site_Annotation . ?pfsb29 faldo:position ?thisPositionOn32 ; rdf:type faldo:ExactPosition . ?pfse30 faldo:position ?thisPositionOn33 ; rdf:type faldo:ExactPosition . ?ligand31 rdfs:subClassOf chebi:29105 . ?annotation34 faldo:begin ?pfsb35 ; faldo:end ?pfse36 ; up:ligand ?ligand37 ; rdf:type up:Binding_Site_Annotation . ?pfsb35 faldo:position ?thisPositionOn38 ; rdf:type faldo:ExactPosition . ?pfse36 faldo:position ?thisPositionOn39 ; rdf:type faldo:ExactPosition . ?ligand37 rdfs:subClassOf chebi:29105 . ?pfs40 up:annotation ?annotation41 , ?annotation47 , ?annotation53 . ?annotation41 faldo:begin ?pfsb42 ; faldo:end ?pfse43 ; up:ligand ?ligand44 ; rdf:type up:Binding_Site_Annotation . ?pfsb42 faldo:position ?thisPositionOn45 ; rdf:type faldo:ExactPosition . ?pfse43 faldo:position ?thisPositionOn46 ; rdf:type faldo:ExactPosition . ?ligand44 rdfs:subClassOf chebi:30616 . ?annotation47 faldo:begin ?pfsb48 ; faldo:end ?pfse49 ; up:ligand ?ligand50 ; rdf:type up:Binding_Site_Annotation . ?pfsb48 faldo:position ?thisPositionOn51 ; rdf:type faldo:ExactPosition . ?pfse49 faldo:position ?thisPositionOn52 ; rdf:type faldo:ExactPosition . ?ligand50 rdfs:subClassOf chebi:30616 . ?annotation53 faldo:begin ?pfsb54 ; faldo:end ?pfse55 ; up:ligand ?ligand56 ; rdf:type up:Binding_Site_Annotation . ?pfsb54 faldo:position ?thisPositionOn57 ; rdf:type faldo:ExactPosition . ?pfse55 faldo:position ?thisPositionOn58 ; rdf:type faldo:ExactPosition . ?ligand56 rdfs:subClassOf chebi:30616 . ?pfs59 up:annotation ?annotation60 . ?annotation60 faldo:begin ?pfsb61 ; faldo:end ?pfse62 ; rdf:type up:Active_Site_Annotation . ?pfsb61 faldo:position ?thisPositionOn63 ; rdf:type faldo:ExactPosition . ?pfse62 faldo:position ?thisPositionOn64 ; rdf:type faldo:ExactPosition . _:820049 a rdf:Statement ; up:attribution _:820015 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation0 . _:820050 a rdf:Statement ; up:attribution _:820016 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:963 . _:820051 a rdf:Statement ; up:attribution _:820017 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:256 . _:820052 a rdf:Statement ; up:attribution _:820018 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:378 . _:820053 a rdf:Statement ; up:attribution _:820019 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:813 . _:820054 a rdf:Statement ; up:attribution _:820020 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0045048 . _:820055 a rdf:Statement ; up:attribution _:820021 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:820056 a rdf:Statement ; up:attribution _:820022 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:479 . _:820057 a rdf:Statement ; up:attribution _:820023 ; rdf:subject ?case1 ; rdf:predicate up:classifiedWith ; rdf:object keyword:862 . _:820058 a rdf:Statement ; up:attribution _:820024 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:820059 a rdf:Statement ; up:attribution _:820025 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:820060 a rdf:Statement ; up:attribution _:820026 ; rdf:subject ?case3 ; rdf:predicate up:recommendedName ; rdf:object ?name4 . _:820061 a rdf:Statement ; up:attribution _:820027 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name6 . _:820062 a rdf:Statement ; up:attribution _:820028 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name7 . _:820063 a rdf:Statement ; up:attribution _:820029 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name8 . _:820064 a rdf:Statement ; up:attribution _:820030 ; rdf:subject ?case3 ; rdf:predicate up:alternativeName ; rdf:object ?name9 . _:820065 a rdf:Statement ; up:attribution _:820031 ; rdf:subject ?case10 ; rdf:predicate up:classifiedWith ; rdf:object keyword:539 . _:820066 a rdf:Statement ; up:attribution _:820032 ; rdf:subject ?case12 ; rdf:predicate up:classifiedWith ; rdf:object keyword:59 . _:820067 a rdf:Statement ; up:attribution _:820033 ; rdf:subject ?case12 ; rdf:predicate up:classifiedWith ; rdf:object keyword:931 . _:820068 a rdf:Statement ; up:attribution _:820034 ; rdf:subject ?case12 ; rdf:predicate up:classifiedWith ; rdf:object keyword:333 . _:820069 a rdf:Statement ; up:attribution _:820035 ; rdf:subject ?case12 ; rdf:predicate up:classifiedWith ; rdf:object GO:0043529 . _:820070 a rdf:Statement ; up:attribution _:820036 ; rdf:subject ?case15 ; rdf:predicate up:classifiedWith ; rdf:object GO:0005783 . _:820071 a rdf:Statement ; up:attribution _:820037 ; rdf:subject ?case18 ; rdf:predicate up:recommendedName ; rdf:object ?name19 . _:820072 a rdf:Statement ; up:attribution _:820038 ; rdf:subject ?case18 ; rdf:predicate up:alternativeName ; rdf:object ?name21 . _:820073 a rdf:Statement ; up:attribution _:820039 ; rdf:subject ?case18 ; rdf:predicate up:alternativeName ; rdf:object ?name22 . _:820074 a rdf:Statement ; up:attribution _:820040 ; rdf:subject ?case23 ; rdf:predicate up:recommendedName ; rdf:object ?name24 . _:820075 a rdf:Statement ; up:attribution _:820041 ; rdf:subject ?case23 ; rdf:predicate up:alternativeName ; rdf:object ?name25 . _:820076 a rdf:Statement ; up:attribution _:820042 ; rdf:subject ?case23 ; rdf:predicate up:alternativeName ; rdf:object ?name26 . _:820077 a rdf:Statement ; up:source unirule:MF_03112 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:820078 a rdf:Statement ; up:attribution _:820043 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation28 . _:820079 a rdf:Statement ; up:source unirule:MF_03112 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:820080 a rdf:Statement ; up:attribution _:820044 ; rdf:subject ?pfs27 ; rdf:predicate up:annotation ; rdf:object ?annotation34 . _:820081 a rdf:Statement ; up:source unirule:MF_03112 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:820082 a rdf:Statement ; up:attribution _:820045 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation41 . _:820083 a rdf:Statement ; up:source unirule:MF_03112 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:820084 a rdf:Statement ; up:attribution _:820046 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation47 . _:820085 a rdf:Statement ; up:source unirule:MF_03112 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:820086 a rdf:Statement ; up:attribution _:820047 ; rdf:subject ?pfs40 ; rdf:predicate up:annotation ; rdf:object ?annotation53 . _:820087 a rdf:Statement ; up:source unirule:MF_03112 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . _:820088 a rdf:Statement ; up:attribution _:820048 ; rdf:subject ?pfs59 ; rdf:predicate up:annotation ; rdf:object ?annotation60 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_03112 #Rule MF_03112 Created by:? on:2012-10-26 Modified by:Edouard de Castro on:2023-06-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_03112 . ?thisOrganism rdfs:subClassOf+ taxon:2759 . BIND(URI(CONCAT(STR(?this), '#MF_03112a0')) AS ?annotation0) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch69 faldo:location ?templateMotifSequenceMatchRegionQ1215470 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ1215472 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ12154MF_0311265 . ?templateMotifSequenceMatchRegionQ1215470 faldo:begin ?templateMotifSequenceMatchBeginQ1215471 . ?templateMotifSequenceMatchBeginQ1215471 faldo:position ?templateMotifSequenceMatchBeginPositionQ1215466 ; faldo:reference isoform:Q12154-1 . ?templateMotifSequenceProfileAlignmentOperationQ1215472 edam:has_input signature:MF_03112 ; rdf:type edam:operation_0300 . ?targetMotifMatch73 faldo:location ?targetMotifMatchRegionMatch74 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0311276 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ12154MF_0311267 . ?targetMotifMatchRegionMatch74 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0311275 . ?targetMotifMatchRegionMatchBeginMF_0311275 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0311268 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0311276 edam:has_input signature:MF_03112 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_2) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_0311265, 1, (STRLEN(?templateMotifCigarQ12154MF_0311265) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_0311265, CONCAT('^(?:-*[^-]){', STR(((285 - ?templateMotifSequenceMatchBeginPositionQ1215466) + 1)), '}'), '')))), '[a-z]', '')) AS ?step177) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_0311267, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311267) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_0311267, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311267) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step177), '}'), '')))), '[^-]', ''))) AS ?step278) . BIND(((?step278 + ?targetMotifMatchRegionMatchBeginPositionMF_0311268) - 1) AS ?thisPositionOn32) . BIND(?thisPositionOn32 AS ?thisPositionOn33) . BIND(?this AS ?pfs1t79) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'C')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_0311265, 1, (STRLEN(?templateMotifCigarQ12154MF_0311265) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_0311265, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionQ1215466) + 1)), '}'), '')))), '[a-z]', '')) AS ?step180) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_0311267, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311267) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_0311267, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311267) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step180), '}'), '')))), '[^-]', ''))) AS ?step281) . BIND(((?step281 + ?targetMotifMatchRegionMatchBeginPositionMF_0311268) - 1) AS ?thisPositionOn38) . BIND(?thisPositionOn38 AS ?thisPositionOn39) . BIND(?this AS ?pfs1t82) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1) = 'C')) . BIND(?this AS ?pfs27) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch87 faldo:location ?templateMotifSequenceMatchRegionQ1215488 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ1215490 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ12154MF_0311283 . ?templateMotifSequenceMatchRegionQ1215488 faldo:begin ?templateMotifSequenceMatchBeginQ1215489 . ?templateMotifSequenceMatchBeginQ1215489 faldo:position ?templateMotifSequenceMatchBeginPositionQ1215484 ; faldo:reference isoform:Q12154-1 . ?templateMotifSequenceProfileAlignmentOperationQ1215490 edam:has_input signature:MF_03112 ; rdf:type edam:operation_0300 . ?targetMotifMatch91 faldo:location ?targetMotifMatchRegionMatch92 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0311294 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ12154MF_0311285 . ?targetMotifMatchRegionMatch92 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0311293 . ?targetMotifMatchRegionMatchBeginMF_0311293 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0311286 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0311294 edam:has_input signature:MF_03112 ; rdf:type edam:operation_0300 . BIND(?this AS ?tagFTGRP_1) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_0311283, 1, (STRLEN(?templateMotifCigarQ12154MF_0311283) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_0311283, CONCAT('^(?:-*[^-]){', STR(((26 - ?templateMotifSequenceMatchBeginPositionQ1215484) + 1)), '}'), '')))), '[a-z]', '')) AS ?step195) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step195), '}'), '')))), '[^-]', ''))) AS ?step296) . BIND(((?step296 + ?targetMotifMatchRegionMatchBeginPositionMF_0311286) - 1) AS ?thisPositionOn45) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_0311283, 1, (STRLEN(?templateMotifCigarQ12154MF_0311283) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_0311283, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionQ1215484) + 1)), '}'), '')))), '[a-z]', '')) AS ?step197) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step197), '}'), '')))), '[^-]', ''))) AS ?step298) . BIND(((?step298 + ?targetMotifMatchRegionMatchBeginPositionMF_0311286) - 1) AS ?thisPositionOn46) . BIND(?this AS ?pfs2t99) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, (?thisPositionOn46 - ?thisPositionOn45)) = 'KGGVGKTT')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_0311283, 1, (STRLEN(?templateMotifCigarQ12154MF_0311283) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_0311283, CONCAT('^(?:-*[^-]){', STR(((245 - ?templateMotifSequenceMatchBeginPositionQ1215484) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1100) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1100), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1100), '}'), '')))), '[^-]', ''))) AS ?step2101) . BIND(((?step2101 + ?targetMotifMatchRegionMatchBeginPositionMF_0311286) - 1) AS ?thisPositionOn51) . BIND(?thisPositionOn51 AS ?thisPositionOn52) . BIND(?this AS ?pfs2t102) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'E')) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_0311283, 1, (STRLEN(?templateMotifCigarQ12154MF_0311283) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_0311283, CONCAT('^(?:-*[^-]){', STR(((272 - ?templateMotifSequenceMatchBeginPositionQ1215484) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1103) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1103), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_0311285, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_0311285) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_0311285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1103), '}'), '')))), '[^-]', ''))) AS ?step2104) . BIND(((?step2104 + ?targetMotifMatchRegionMatchBeginPositionMF_0311286) - 1) AS ?thisPositionOn57) . BIND(?thisPositionOn57 AS ?thisPositionOn58) . BIND(?this AS ?pfs2t105) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'N')) . BIND(?this AS ?pfs40) . } OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch110 faldo:location ?templateMotifSequenceMatchRegionQ12154111 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ12154113 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ12154MF_03112106 . ?templateMotifSequenceMatchRegionQ12154111 faldo:begin ?templateMotifSequenceMatchBeginQ12154112 . ?templateMotifSequenceMatchBeginQ12154112 faldo:position ?templateMotifSequenceMatchBeginPositionQ12154107 ; faldo:reference isoform:Q12154-1 . ?templateMotifSequenceProfileAlignmentOperationQ12154113 edam:has_input signature:MF_03112 ; rdf:type edam:operation_0300 . ?targetMotifMatch114 faldo:location ?targetMotifMatchRegionMatch115 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03112117 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ12154MF_03112108 . ?targetMotifMatchRegionMatch115 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03112116 . ?targetMotifMatchRegionMatchBeginMF_03112116 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03112109 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_03112117 edam:has_input signature:MF_03112 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ12154MF_03112106, 1, (STRLEN(?templateMotifCigarQ12154MF_03112106) - STRLEN(REPLACE(?templateMotifCigarQ12154MF_03112106, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionQ12154107) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1118) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ12154MF_03112108, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_03112108) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_03112108, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ12154MF_03112108, 1, (STRLEN(?targetMotifMatchCigarQ12154MF_03112108) - STRLEN(REPLACE(?targetMotifMatchCigarQ12154MF_03112108, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), '')))), '[^-]', ''))) AS ?step2119) . BIND(((?step2119 + ?targetMotifMatchRegionMatchBeginPositionMF_03112109) - 1) AS ?thisPositionOn63) . BIND(?thisPositionOn63 AS ?thisPositionOn64) . BIND(?this AS ?pfs3t120) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb61) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse62) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'D')) . BIND(URI(CONCAT(STR(?this), '#MF_03112a60')) AS ?annotation60) . BIND(?this AS ?pfs59) . } OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag121) . } BIND(IF(BOUND(?tagFTGRP_2), ?caseWithTag121, ?UNBOUND_VARIABLE) AS ?case1) . OPTIONAL { ?this a up:Protein . BIND(?this AS ?caseWithTag122) . } BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag122, ?UNBOUND_VARIABLE) AS ?case2) . OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4751 . BIND(?this AS ?case3) . BIND(URI(CONCAT(STR(?this), '#MF_03112a4')) AS ?name4) . OPTIONAL { ?this up:encodedBy ?gene126 . ?gene126 up:locusName ?geneLocus124 . } OPTIONAL { ?this up:encodedBy ?gene126 . ?gene126 up:orfName ?geneOrf125 . } BIND(IF(BOUND(?geneLocus124), ?geneLocus124, ?geneOrf125) AS ?part123) . BIND(CONCAT('ATPase ', ?part123) AS ?nameValue5) . BIND(URI(CONCAT(STR(?this), '#MF_03112a6')) AS ?name6) . BIND(URI(CONCAT(STR(?this), '#MF_03112a7')) AS ?name7) . BIND(URI(CONCAT(STR(?this), '#MF_03112a8')) AS ?name8) . BIND(URI(CONCAT(STR(?this), '#MF_03112a9')) AS ?name9) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:40674 . BIND(?this AS ?case10) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:7742 . BIND(?this AS ?case11) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:4930 . BIND(?this AS ?case12) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:6237 . BIND(?this AS ?case13) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ taxon:147537 . BIND(?this AS ?case14) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:4930 . })) . BIND(?this AS ?case15) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { ?thisOrganism rdfs:subClassOf+ taxon:147537 . })) . BIND(?this AS ?case16) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon127 {taxon:40674 taxon:147537} ?thisOrganism rdfs:subClassOf+ ?supertaxon127 . })) . BIND(?this AS ?case17) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon128 {taxon:7742 taxon:6237 taxon:33090} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon128 . BIND(?this AS ?case18) . BIND(URI(CONCAT(STR(?this), '#MF_03112a19')) AS ?name19) . OPTIONAL { ?this up:encodedBy ?gene132 . ?gene132 up:locusName ?geneLocus130 . } OPTIONAL { ?this up:encodedBy ?gene132 . ?gene132 up:orfName ?geneOrf131 . } BIND(IF(BOUND(?geneLocus130), ?geneLocus130, ?geneOrf131) AS ?part129) . BIND(CONCAT('ATPase ', ?part129) AS ?nameValue20) . BIND(URI(CONCAT(STR(?this), '#MF_03112a21')) AS ?name21) . BIND(URI(CONCAT(STR(?this), '#MF_03112a22')) AS ?name22) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon133 {taxon:7742 taxon:6237 taxon:33090 taxon:4751} ?thisOrganism rdfs:subClassOf+ ?supertaxon133 . })) . BIND(?this AS ?case23) . BIND(URI(CONCAT(STR(?this), '#MF_03112a24')) AS ?name24) . BIND(URI(CONCAT(STR(?this), '#MF_03112a25')) AS ?name25) . BIND(URI(CONCAT(STR(?this), '#MF_03112a26')) AS ?name26) . } } "xsd:string |
| http://purl.uniprot.org/unirules/MF_03112 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_03112#construct |