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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-213 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-127 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-212 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-103 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-122 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-146 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-121 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-145 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-169 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-120 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-39 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-148 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-100 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-124 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-123 |
| http://purl.uniprot.org/unirules/MF_00414#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_00414#construct-template-147 |
| http://purl.uniprot.org/unirules/MF_00414#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_00414#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_00414#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_00414#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00414#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00414#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:162704 up:source unirule:MF_00414 .
_:162705 up:source unirule:MF_00414 .
_:162706 up:source unirule:MF_00414 .
_:162707 up:source unirule:MF_00414 .
_:162708 up:source unirule:MF_00414 .
_:162709 up:source unirule:MF_00414 .
_:162710 up:source unirule:MF_00414 .
_:162711 up:source unirule:MF_00414 .
_:162712 up:source unirule:MF_00414 .
_:162713 up:source unirule:MF_00414 .
_:162714 up:source unirule:MF_00414 .
_:162715 up:source unirule:MF_00414 .
_:162716 up:source unirule:MF_00414 .
_:162717 up:source unirule:MF_00414 .
_:162718 up:source unirule:MF_00414 .
_:162719 up:source unirule:MF_00414 .
_:162720 up:source unirule:MF_00414 .
_:162721 up:source unirule:MF_00414 .
_:162722 up:source unirule:MF_00414 .
_:162723 up:source unirule:MF_00414 .
_:162724 up:source unirule:MF_00414 .
_:162725 up:source unirule:MF_00414 .
_:162726 up:source unirule:MF_00414 .
_:162727 up:source unirule:MF_00414 .
_:162728 up:source unirule:MF_00414 .
_:162729 up:source unirule:MF_00414 .
_:162730 up:source unirule:MF_00414 .
_:162731 up:source unirule:MF_00414 .
_:162732 up:source unirule:MF_00414 .
_:162733 up:source unirule:MF_00414 .
_:162734 up:source unirule:MF_00414 .
_:162735 up:source unirule:MF_00414 .
_:162736 up:source unirule:MF_00414 .
_:162737 up:source unirule:MF_00414 .
_:162738 up:source unirule:MF_00414 .
_:162739 up:source unirule:MF_00414 .
_:162740 up:source unirule:MF_00414 .
_:162741 up:source unirule:MF_00414 .
_:162742 up:source unirule:MF_00414 .
_:162743 up:source unirule:MF_00414 .
_:162744 up:source unirule:MF_00414 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation5 ;
up:classifiedWith GO:0004672 ,
GO:0005886 ,
GO:0010795 ,
keyword:1003 ,
keyword:1133 ,
keyword:418 ,
keyword:472 ,
keyword:547 ,
keyword:67 ,
keyword:808 ,
keyword:812 ,
keyword:831 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.7.-.-' ;
up:fullName 'Probable protein kinase UbiB' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Ubiquinone biosynthesis protein UbiB' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'ubiB' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.' .
?annotation4 a up:Pathway_Annotation ;
rdfs:comment 'Cofactor biosynthesis; ubiquinone biosynthesis [regulation].' .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the ABC1 family. UbiB subfamily.' .
?case6 up:classifiedWith keyword:997 .
?pfs7 up:annotation ?annotation8 .
?annotation8 faldo:begin ?pfsb9 ;
faldo:end ?pfse10 ;
rdf:type up:Domain_Extent_Annotation ;
rdfs:comment 'Protein kinase' .
?pfsb9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfse10 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
up:ligand ?ligand17 ;
rdf:type up:Binding_Site_Annotation .
?pfsb15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?ligand17 rdfs:subClassOf chebi:30616 .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton acceptor' .
?pfsb22 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfs26 up:annotation ?annotation27 .
?annotation27 faldo:begin ?pfsb28 ;
faldo:end ?pfse29 ;
up:ligand ?ligand30 ;
rdf:type up:Binding_Site_Annotation .
?pfsb28 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfse29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?ligand30 rdfs:subClassOf chebi:30616 .
?sam33 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane34 faldo:begin ?transmembraneb35 ;
faldo:end ?transmembranee36 .
?transmembraneb35 faldo:position ?transmembranebp37 .
?transmembranee36 faldo:position ?transmembraneep38 .
?keyword39 up:range ?transmembrane34 .
?keyword40 up:range ?transmembrane34 .
?keyword41 up:range ?transmembrane34 .
?sam42 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane43 faldo:begin ?transmembraneb44 ;
faldo:end ?transmembranee45 .
?transmembraneb44 faldo:position ?transmembranebp46 .
?transmembranee45 faldo:position ?transmembraneep47 .
?keyword48 up:range ?transmembrane43 .
?keyword49 up:range ?transmembrane43 .
?keyword50 up:range ?transmembrane43 .
?sam51 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane52 faldo:begin ?transmembraneb53 ;
faldo:end ?transmembranee54 .
?transmembraneb53 faldo:position ?transmembranebp55 .
?transmembranee54 faldo:position ?transmembraneep56 .
?keyword57 up:range ?transmembrane52 .
?keyword58 up:range ?transmembrane52 .
?keyword59 up:range ?transmembrane52 .
?sam60 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane61 faldo:begin ?transmembraneb62 ;
faldo:end ?transmembranee63 .
?transmembraneb62 faldo:position ?transmembranebp64 .
?transmembranee63 faldo:position ?transmembraneep65 .
?keyword66 up:range ?transmembrane61 .
?keyword67 up:range ?transmembrane61 .
?keyword68 up:range ?transmembrane61 .
?sam69 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane70 faldo:begin ?transmembraneb71 ;
faldo:end ?transmembranee72 .
?transmembraneb71 faldo:position ?transmembranebp73 .
?transmembranee72 faldo:position ?transmembraneep74 .
?keyword75 up:range ?transmembrane70 .
?keyword76 up:range ?transmembrane70 .
?keyword77 up:range ?transmembrane70 .
?sam78 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane79 faldo:begin ?transmembraneb80 ;
faldo:end ?transmembranee81 .
?transmembraneb80 faldo:position ?transmembranebp82 .
?transmembranee81 faldo:position ?transmembraneep83 .
?keyword84 up:range ?transmembrane79 .
?keyword85 up:range ?transmembrane79 .
?keyword86 up:range ?transmembrane79 .
_:162745 a rdf:Statement ;
up:attribution _:162704 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:162746 a rdf:Statement ;
up:attribution _:162705 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:162747 a rdf:Statement ;
up:attribution _:162706 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:162748 a rdf:Statement ;
up:attribution _:162707 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:162749 a rdf:Statement ;
up:attribution _:162708 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:162750 a rdf:Statement ;
up:attribution _:162709 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:162751 a rdf:Statement ;
up:attribution _:162710 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:162752 a rdf:Statement ;
up:attribution _:162711 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:162753 a rdf:Statement ;
up:attribution _:162712 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:418 .
_:162754 a rdf:Statement ;
up:attribution _:162713 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162755 a rdf:Statement ;
up:attribution _:162714 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:162756 a rdf:Statement ;
up:attribution _:162715 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:162757 a rdf:Statement ;
up:attribution _:162716 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162758 a rdf:Statement ;
up:attribution _:162717 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:831 .
_:162759 a rdf:Statement ;
up:attribution _:162718 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:162760 a rdf:Statement ;
up:attribution _:162719 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004672 .
_:162761 a rdf:Statement ;
up:attribution _:162720 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0010795 .
_:162762 a rdf:Statement ;
up:attribution _:162721 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:162763 a rdf:Statement ;
up:attribution _:162722 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:162764 a rdf:Statement ;
up:source unirule:MF_00414 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:162765 a rdf:Statement ;
up:attribution _:162723 ;
rdf:subject ?pfs7 ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:162766 a rdf:Statement ;
up:source unirule:MF_00414 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:162767 a rdf:Statement ;
up:attribution _:162724 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:162768 a rdf:Statement ;
up:source unirule:MF_00414 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:162769 a rdf:Statement ;
up:attribution _:162725 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:162770 a rdf:Statement ;
up:source unirule:MF_00414 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:162771 a rdf:Statement ;
up:attribution _:162726 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:162772 a rdf:Statement ;
up:attribution _:162727 ;
rdf:subject ?sam33 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162773 a rdf:Statement ;
up:attribution _:162728 ;
rdf:subject ?sam33 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162774 a rdf:Statement ;
up:attribution _:162729 ;
rdf:subject ?sam33 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:162775 a rdf:Statement ;
up:attribution _:162730 ;
rdf:subject ?sam42 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162776 a rdf:Statement ;
up:attribution _:162731 ;
rdf:subject ?sam42 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162777 a rdf:Statement ;
up:attribution _:162732 ;
rdf:subject ?sam42 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:162778 a rdf:Statement ;
up:attribution _:162733 ;
rdf:subject ?sam51 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162779 a rdf:Statement ;
up:attribution _:162734 ;
rdf:subject ?sam51 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162780 a rdf:Statement ;
up:attribution _:162735 ;
rdf:subject ?sam51 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:162781 a rdf:Statement ;
up:attribution _:162736 ;
rdf:subject ?sam60 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162782 a rdf:Statement ;
up:attribution _:162737 ;
rdf:subject ?sam60 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162783 a rdf:Statement ;
up:attribution _:162738 ;
rdf:subject ?sam60 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:162784 a rdf:Statement ;
up:attribution _:162739 ;
rdf:subject ?sam69 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162785 a rdf:Statement ;
up:attribution _:162740 ;
rdf:subject ?sam69 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162786 a rdf:Statement ;
up:attribution _:162741 ;
rdf:subject ?sam69 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:162787 a rdf:Statement ;
up:attribution _:162742 ;
rdf:subject ?sam78 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:162788 a rdf:Statement ;
up:attribution _:162743 ;
rdf:subject ?sam78 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:162789 a rdf:Statement ;
up:attribution _:162744 ;
rdf:subject ?sam78 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00414
#Rule MF_00414 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00414 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00414a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a5')) AS ?annotation5) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch91 faldo:location ?templateMotifSequenceMatchRegionP0A6A092 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6A094 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6A0MF_0041487 .
?templateMotifSequenceMatchRegionP0A6A092 faldo:begin ?templateMotifSequenceMatchBeginP0A6A093 .
?templateMotifSequenceMatchBeginP0A6A093 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6A088 ;
faldo:reference isoform:P0A6A0-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6A094 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
?targetMotifMatch95 faldo:location ?targetMotifMatchRegionMatch96 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0041498 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6A0MF_0041489 .
?targetMotifMatchRegionMatch96 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0041497 .
?targetMotifMatchRegionMatchBeginMF_0041497 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0041490 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0041498 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6A0MF_0041487, 1, (STRLEN(?templateMotifCigarP0A6A0MF_0041487) - STRLEN(REPLACE(?templateMotifCigarP0A6A0MF_0041487, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionP0A6A088) + 1)), '}'), '')))), '[a-z]', '')) AS ?step199) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6A0MF_0041489, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_0041489) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_0041489, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6A0MF_0041489, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_0041489) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_0041489, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step199), '}'), '')))), '[^-]', ''))) AS ?step2100) .
BIND(((?step2100 + ?targetMotifMatchRegionMatchBeginPositionMF_0041490) - 1) AS ?thisPositionOn11) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6A0MF_0041487, 1, (STRLEN(?templateMotifCigarP0A6A0MF_0041487) - STRLEN(REPLACE(?templateMotifCigarP0A6A0MF_0041487, CONCAT('^(?:-*[^-]){', STR(((502 - ?templateMotifSequenceMatchBeginPositionP0A6A088) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1101) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6A0MF_0041489, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_0041489) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_0041489, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6A0MF_0041489, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_0041489) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_0041489, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1101), '}'), '')))), '[^-]', ''))) AS ?step2102) .
BIND(((?step2102 + ?targetMotifMatchRegionMatchBeginPositionMF_0041490) - 1) AS ?thisPositionOn12) .
BIND(?this AS ?pfs1t103) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb9) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse10) .
FILTER ((BOUND(?thisPositionOn11) && BOUND(?thisPositionOn12))) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a8')) AS ?annotation8) .
BIND(?this AS ?pfs7) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch108 faldo:location ?templateMotifSequenceMatchRegionP0A6A0109 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6A0111 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6A0MF_00414104 .
?templateMotifSequenceMatchRegionP0A6A0109 faldo:begin ?templateMotifSequenceMatchBeginP0A6A0110 .
?templateMotifSequenceMatchBeginP0A6A0110 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6A0105 ;
faldo:reference isoform:P0A6A0-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6A0111 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
?targetMotifMatch112 faldo:location ?targetMotifMatchRegionMatch113 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00414115 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6A0MF_00414106 .
?targetMotifMatchRegionMatch113 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00414114 .
?targetMotifMatchRegionMatchBeginMF_00414114 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00414107 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00414115 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6A0MF_00414104, 1, (STRLEN(?templateMotifCigarP0A6A0MF_00414104) - STRLEN(REPLACE(?templateMotifCigarP0A6A0MF_00414104, CONCAT('^(?:-*[^-]){', STR(((130 - ?templateMotifSequenceMatchBeginPositionP0A6A0105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1116) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414106, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414106) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414106, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414106) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1116), '}'), '')))), '[^-]', ''))) AS ?step2117) .
BIND(((?step2117 + ?targetMotifMatchRegionMatchBeginPositionMF_00414107) - 1) AS ?thisPositionOn18) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6A0MF_00414104, 1, (STRLEN(?templateMotifCigarP0A6A0MF_00414104) - STRLEN(REPLACE(?templateMotifCigarP0A6A0MF_00414104, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionP0A6A0105) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1118) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414106, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414106) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414106, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414106) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414106, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), '')))), '[^-]', ''))) AS ?step2119) .
BIND(((?step2119 + ?targetMotifMatchRegionMatchBeginPositionMF_00414107) - 1) AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t120) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) .
FILTER ((BOUND(?thisPositionOn18) && BOUND(?thisPositionOn19))) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch125 faldo:location ?templateMotifSequenceMatchRegionP0A6A0126 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6A0128 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6A0MF_00414121 .
?templateMotifSequenceMatchRegionP0A6A0126 faldo:begin ?templateMotifSequenceMatchBeginP0A6A0127 .
?templateMotifSequenceMatchBeginP0A6A0127 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6A0122 ;
faldo:reference isoform:P0A6A0-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6A0128 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
?targetMotifMatch129 faldo:location ?targetMotifMatchRegionMatch130 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00414132 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6A0MF_00414123 .
?targetMotifMatchRegionMatch130 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00414131 .
?targetMotifMatchRegionMatchBeginMF_00414131 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00414124 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00414132 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6A0MF_00414121, 1, (STRLEN(?templateMotifCigarP0A6A0MF_00414121) - STRLEN(REPLACE(?templateMotifCigarP0A6A0MF_00414121, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionP0A6A0122) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1133) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414123, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414123) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414123, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414123) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), '')))), '[^-]', ''))) AS ?step2134) .
BIND(((?step2134 + ?targetMotifMatchRegionMatchBeginPositionMF_00414124) - 1) AS ?thisPositionOn24) .
BIND(?thisPositionOn24 AS ?thisPositionOn25) .
BIND(?this AS ?pfs1t135) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch140 faldo:location ?templateMotifSequenceMatchRegionP0A6A0141 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6A0143 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6A0MF_00414136 .
?templateMotifSequenceMatchRegionP0A6A0141 faldo:begin ?templateMotifSequenceMatchBeginP0A6A0142 .
?templateMotifSequenceMatchBeginP0A6A0142 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6A0137 ;
faldo:reference isoform:P0A6A0-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6A0143 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
?targetMotifMatch144 faldo:location ?targetMotifMatchRegionMatch145 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00414147 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6A0MF_00414138 .
?targetMotifMatchRegionMatch145 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00414146 .
?targetMotifMatchRegionMatchBeginMF_00414146 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00414139 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00414147 edam:has_input signature:MF_00414 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6A0MF_00414136, 1, (STRLEN(?templateMotifCigarP0A6A0MF_00414136) - STRLEN(REPLACE(?templateMotifCigarP0A6A0MF_00414136, CONCAT('^(?:-*[^-]){', STR(((153 - ?templateMotifSequenceMatchBeginPositionP0A6A0137) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1148) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414138, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414138) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6A0MF_00414138, 1, (STRLEN(?targetMotifMatchCigarP0A6A0MF_00414138) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6A0MF_00414138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1148), '}'), '')))), '[^-]', ''))) AS ?step2149) .
BIND(((?step2149 + ?targetMotifMatchRegionMatchBeginPositionMF_00414139) - 1) AS ?thisPositionOn31) .
BIND(?thisPositionOn31 AS ?thisPositionOn32) .
BIND(?this AS ?pfs1t150) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00414a27')) AS ?annotation27) .
BIND(?this AS ?pfs26) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome |
| http://purl.uniprot.org/unirules/MF_00414 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00414#construct |