| http://purl.uniprot.org/unirules/MF_00451#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:178832 up:source unirule:MF_00451 .
_:178833 up:source unirule:MF_00451 .
_:178834 up:source unirule:MF_00451 .
_:178835 up:source unirule:MF_00451 .
_:178836 up:source unirule:MF_00451 .
_:178837 up:source unirule:MF_00451 .
_:178838 up:source unirule:MF_00451 .
_:178839 up:source unirule:MF_00451 .
_:178840 up:source unirule:MF_00451 .
_:178841 up:source unirule:MF_00451 .
_:178842 up:source unirule:MF_00451 .
_:178843 up:source unirule:MF_00451 .
_:178844 up:source unirule:MF_00451 .
_:178845 up:source unirule:MF_00451 .
_:178846 up:source unirule:MF_00451 .
_:178847 up:source unirule:MF_00451 .
_:178848 up:source unirule:MF_00451 .
_:178849 up:source unirule:MF_00451 .
_:178850 up:source unirule:MF_00451 .
_:178851 up:source unirule:MF_00451 .
_:178852 up:source unirule:MF_00451 .
_:178853 up:source unirule:MF_00451 .
_:178854 up:source unirule:MF_00451 .
_:178855 up:source unirule:MF_00451 .
_:178856 up:source unirule:MF_00451 .
_:178857 up:source unirule:MF_00451 .
_:178858 up:source unirule:MF_00451 .
_:178859 up:source unirule:MF_00451 .
_:178860 up:source unirule:MF_00451 .
_:178861 up:source unirule:MF_00451 .
_:178862 up:source unirule:MF_00451 .
_:178863 up:source unirule:MF_00451 .
_:178864 up:source unirule:MF_00451 .
_:178865 up:source unirule:MF_00451 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation8 ,
?annotation9 ,
?annotation11 ;
up:classifiedWith GO:0004550 ,
GO:0005524 ,
GO:0005737 ,
GO:0006183 ,
GO:0006228 ,
GO:0006241 ,
keyword:418 ,
keyword:460 ,
keyword:479 ,
keyword:546 ,
keyword:547 ,
keyword:597 ,
keyword:67 ,
keyword:808 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.7.4.6' ;
up:fullName 'Nucleoside diphosphate kinase' ;
up:shortName 'NDK' ,
'NDP kinase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Nucleoside-2-P kinase' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'ndk' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 up:activity ?activity7 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity7 up:catalyticActivity ;
up:enzymeClass .
?annotation8 up:cofactor chebi:18420 ;
rdf:type up:Cofactor_Annotation .
?annotation9 a up:Subcellular_Location_Annotation .
?annotation9li10 up:cellularComponent .
?annotation11 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the NDK family.' .
?case13 up:classifiedWith keyword:597 .
?pfs14 up:annotation ?annotation15 .
?annotation15 faldo:begin ?pfsb16 ;
faldo:end ?pfse17 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'Phosphoserine' .
?pfsb16 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse17 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
rdf:type up:Modified_Residue_Annotation ;
rdfs:comment 'Phosphothreonine' .
?pfsb22 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfs26 up:annotation ?annotation27 .
?annotation27 faldo:begin ?pfsb28 ;
faldo:end ?pfse29 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Pros-phosphohistidine intermediate' .
?pfsb28 faldo:position ?thisPositionOn30 ;
rdf:type faldo:ExactPosition .
?pfse29 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfs32 up:annotation ?annotation33 .
?annotation33 faldo:begin ?pfsb34 ;
faldo:end ?pfse35 ;
up:ligand ?ligand36 ;
rdf:type up:Binding_Site_Annotation .
?pfsb34 faldo:position ?thisPositionOn37 ;
rdf:type faldo:ExactPosition .
?pfse35 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?ligand36 rdfs:subClassOf chebi:30616 .
?pfs39 up:annotation ?annotation40 .
?annotation40 faldo:begin ?pfsb41 ;
faldo:end ?pfse42 ;
up:ligand ?ligand43 ;
rdf:type up:Binding_Site_Annotation .
?pfsb41 faldo:position ?thisPositionOn44 ;
rdf:type faldo:ExactPosition .
?pfse42 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?ligand43 rdfs:subClassOf chebi:30616 .
?pfs46 up:annotation ?annotation47 .
?annotation47 faldo:begin ?pfsb48 ;
faldo:end ?pfse49 ;
up:ligand ?ligand50 ;
rdf:type up:Binding_Site_Annotation .
?pfsb48 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?pfse49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?ligand50 rdfs:subClassOf chebi:30616 .
?pfs53 up:annotation ?annotation54 .
?annotation54 faldo:begin ?pfsb55 ;
faldo:end ?pfse56 ;
up:ligand ?ligand57 ;
rdf:type up:Binding_Site_Annotation .
?pfsb55 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?pfse56 faldo:position ?thisPositionOn59 ;
rdf:type faldo:ExactPosition .
?ligand57 rdfs:subClassOf chebi:30616 .
?pfs60 up:annotation ?annotation61 .
?annotation61 faldo:begin ?pfsb62 ;
faldo:end ?pfse63 ;
up:ligand ?ligand64 ;
rdf:type up:Binding_Site_Annotation .
?pfsb62 faldo:position ?thisPositionOn65 ;
rdf:type faldo:ExactPosition .
?pfse63 faldo:position ?thisPositionOn66 ;
rdf:type faldo:ExactPosition .
?ligand64 rdfs:subClassOf chebi:30616 .
?pfs67 up:annotation ?annotation68 .
?annotation68 faldo:begin ?pfsb69 ;
faldo:end ?pfse70 ;
up:ligand ?ligand71 ;
rdf:type up:Binding_Site_Annotation .
?pfsb69 faldo:position ?thisPositionOn72 ;
rdf:type faldo:ExactPosition .
?pfse70 faldo:position ?thisPositionOn73 ;
rdf:type faldo:ExactPosition .
?ligand71 rdfs:subClassOf chebi:30616 .
_:178866 a rdf:Statement ;
up:attribution _:178832 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:178867 a rdf:Statement ;
up:attribution _:178833 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:178868 a rdf:Statement ;
up:attribution _:178834 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:178869 a rdf:Statement ;
up:attribution _:178835 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:178870 a rdf:Statement ;
up:attribution _:178836 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:178871 a rdf:Statement ;
up:attribution _:178837 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:178872 a rdf:Statement ;
up:attribution _:178838 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:178873 a rdf:Statement ;
up:attribution _:178839 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:178874 a rdf:Statement ;
up:attribution _:178840 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:178875 a rdf:Statement ;
up:attribution _:178841 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:178876 a rdf:Statement ;
up:attribution _:178842 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:460 .
_:178877 a rdf:Statement ;
up:attribution _:178843 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:178878 a rdf:Statement ;
up:attribution _:178844 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:546 .
_:178879 a rdf:Statement ;
up:attribution _:178845 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:547 .
_:178880 a rdf:Statement ;
up:attribution _:178846 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:597 .
_:178881 a rdf:Statement ;
up:attribution _:178847 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:178882 a rdf:Statement ;
up:attribution _:178848 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:418 .
_:178883 a rdf:Statement ;
up:attribution _:178849 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:67 .
_:178884 a rdf:Statement ;
up:attribution _:178850 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005524 .
_:178885 a rdf:Statement ;
up:attribution _:178851 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004550 .
_:178886 a rdf:Statement ;
up:attribution _:178852 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006241 .
_:178887 a rdf:Statement ;
up:attribution _:178853 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006183 .
_:178888 a rdf:Statement ;
up:attribution _:178854 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006228 .
_:178889 a rdf:Statement ;
up:attribution _:178855 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:178890 a rdf:Statement ;
up:attribution _:178856 ;
rdf:subject ?case13 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:597 .
_:178891 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs14 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:178892 a rdf:Statement ;
up:attribution _:178857 ;
rdf:subject ?pfs14 ;
rdf:predicate up:annotation ;
rdf:object ?annotation15 .
_:178893 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:178894 a rdf:Statement ;
up:attribution _:178858 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:178895 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:178896 a rdf:Statement ;
up:attribution _:178859 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:178897 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs32 ;
rdf:predicate up:annotation ;
rdf:object ?annotation33 .
_:178898 a rdf:Statement ;
up:attribution _:178860 ;
rdf:subject ?pfs32 ;
rdf:predicate up:annotation ;
rdf:object ?annotation33 .
_:178899 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs39 ;
rdf:predicate up:annotation ;
rdf:object ?annotation40 .
_:178900 a rdf:Statement ;
up:attribution _:178861 ;
rdf:subject ?pfs39 ;
rdf:predicate up:annotation ;
rdf:object ?annotation40 .
_:178901 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs46 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:178902 a rdf:Statement ;
up:attribution _:178862 ;
rdf:subject ?pfs46 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:178903 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs53 ;
rdf:predicate up:annotation ;
rdf:object ?annotation54 .
_:178904 a rdf:Statement ;
up:attribution _:178863 ;
rdf:subject ?pfs53 ;
rdf:predicate up:annotation ;
rdf:object ?annotation54 .
_:178905 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs60 ;
rdf:predicate up:annotation ;
rdf:object ?annotation61 .
_:178906 a rdf:Statement ;
up:attribution _:178864 ;
rdf:subject ?pfs60 ;
rdf:predicate up:annotation ;
rdf:object ?annotation61 .
_:178907 a rdf:Statement ;
up:source unirule:MF_00451 ;
rdf:subject ?pfs67 ;
rdf:predicate up:annotation ;
rdf:object ?annotation68 .
_:178908 a rdf:Statement ;
up:attribution _:178865 ;
rdf:subject ?pfs67 ;
rdf:predicate up:annotation ;
rdf:object ?annotation68 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00451
#Rule MF_00451 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2024-06-28
VALUES ?supertaxon74 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00451 .
?thisOrganism rdfs:subClassOf+ ?supertaxon74 .
BIND(URI(CONCAT(STR(?this), '#MF_00451a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a9')) AS ?annotation9) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a11')) AS ?annotation11) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch79 faldo:location ?templateMotifSequenceMatchRegionP3110380 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3110382 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP31103MF_0045175 .
?templateMotifSequenceMatchRegionP3110380 faldo:begin ?templateMotifSequenceMatchBeginP3110381 .
?templateMotifSequenceMatchBeginP3110381 faldo:position ?templateMotifSequenceMatchBeginPositionP3110376 ;
faldo:reference isoform:P31103-1 .
?templateMotifSequenceProfileAlignmentOperationP3110382 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch83 faldo:location ?targetMotifMatchRegionMatch84 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0045186 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP31103MF_0045177 .
?targetMotifMatchRegionMatch84 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0045185 .
?targetMotifMatchRegionMatchBeginMF_0045185 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0045178 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0045186 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_9) .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:186817 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31103MF_0045175, 1, (STRLEN(?templateMotifCigarP31103MF_0045175) - STRLEN(REPLACE(?templateMotifCigarP31103MF_0045175, CONCAT('^(?:-*[^-]){', STR(((123 - ?templateMotifSequenceMatchBeginPositionP3110376) + 1)), '}'), '')))), '[a-z]', '')) AS ?step187) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31103MF_0045177, 1, (STRLEN(?targetMotifMatchCigarP31103MF_0045177) - STRLEN(REPLACE(?targetMotifMatchCigarP31103MF_0045177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31103MF_0045177, 1, (STRLEN(?targetMotifMatchCigarP31103MF_0045177) - STRLEN(REPLACE(?targetMotifMatchCigarP31103MF_0045177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step187), '}'), '')))), '[^-]', ''))) AS ?step288) .
BIND(((?step288 + ?targetMotifMatchRegionMatchBeginPositionMF_0045178) - 1) AS ?thisPositionOn18) .
BIND(?thisPositionOn18 AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t89) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb16) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse17) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a15')) AS ?annotation15) .
BIND(?this AS ?pfs14) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch94 faldo:location ?templateMotifSequenceMatchRegionP3110395 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP3110397 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP31103MF_0045190 .
?templateMotifSequenceMatchRegionP3110395 faldo:begin ?templateMotifSequenceMatchBeginP3110396 .
?templateMotifSequenceMatchBeginP3110396 faldo:position ?templateMotifSequenceMatchBeginPositionP3110391 ;
faldo:reference isoform:P31103-1 .
?templateMotifSequenceProfileAlignmentOperationP3110397 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch98 faldo:location ?targetMotifMatchRegionMatch99 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451101 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP31103MF_0045192 .
?targetMotifMatchRegionMatch99 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451100 .
?targetMotifMatchRegionMatchBeginMF_00451100 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0045193 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451101 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_8) .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:186817 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP31103MF_0045190, 1, (STRLEN(?templateMotifCigarP31103MF_0045190) - STRLEN(REPLACE(?templateMotifCigarP31103MF_0045190, CONCAT('^(?:-*[^-]){', STR(((92 - ?templateMotifSequenceMatchBeginPositionP3110391) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1102) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP31103MF_0045192, 1, (STRLEN(?targetMotifMatchCigarP31103MF_0045192) - STRLEN(REPLACE(?targetMotifMatchCigarP31103MF_0045192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP31103MF_0045192, 1, (STRLEN(?targetMotifMatchCigarP31103MF_0045192) - STRLEN(REPLACE(?targetMotifMatchCigarP31103MF_0045192, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1102), '}'), '')))), '[^-]', ''))) AS ?step2103) .
BIND(((?step2103 + ?targetMotifMatchRegionMatchBeginPositionMF_0045193) - 1) AS ?thisPositionOn24) .
BIND(?thisPositionOn24 AS ?thisPositionOn25) .
BIND(?this AS ?pfs2t104) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn24, 1) = 'T')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch109 faldo:location ?templateMotifSequenceMatchRegionP0A763110 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763112 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451105 .
?templateMotifSequenceMatchRegionP0A763110 faldo:begin ?templateMotifSequenceMatchBeginP0A763111 .
?templateMotifSequenceMatchBeginP0A763111 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763106 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763112 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch113 faldo:location ?targetMotifMatchRegionMatch114 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451116 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451107 .
?targetMotifMatchRegionMatch114 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451115 .
?targetMotifMatchRegionMatchBeginMF_00451115 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451108 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451116 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451105, 1, (STRLEN(?templateMotifCigarP0A763MF_00451105) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451105, CONCAT('^(?:-*[^-]){', STR(((117 - ?templateMotifSequenceMatchBeginPositionP0A763106) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1117) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451107, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451107) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451107, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1117), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451107, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451107) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451107, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1117), '}'), '')))), '[^-]', ''))) AS ?step2118) .
BIND(((?step2118 + ?targetMotifMatchRegionMatchBeginPositionMF_00451108) - 1) AS ?thisPositionOn30) .
BIND(?thisPositionOn30 AS ?thisPositionOn31) .
BIND(?this AS ?pfs3t119) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse29) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a27')) AS ?annotation27) .
BIND(?this AS ?pfs26) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch124 faldo:location ?templateMotifSequenceMatchRegionP0A763125 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763127 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451120 .
?templateMotifSequenceMatchRegionP0A763125 faldo:begin ?templateMotifSequenceMatchBeginP0A763126 .
?templateMotifSequenceMatchBeginP0A763126 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763121 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763127 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch128 faldo:location ?targetMotifMatchRegionMatch129 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451131 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451122 .
?targetMotifMatchRegionMatch129 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451130 .
?targetMotifMatchRegionMatchBeginMF_00451130 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451123 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451131 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451120, 1, (STRLEN(?templateMotifCigarP0A763MF_00451120) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451120, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionP0A763121) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1132) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451122, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451122) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451122, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1132), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451122, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451122) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451122, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1132), '}'), '')))), '[^-]', ''))) AS ?step2133) .
BIND(((?step2133 + ?targetMotifMatchRegionMatchBeginPositionMF_00451123) - 1) AS ?thisPositionOn37) .
BIND(?thisPositionOn37 AS ?thisPositionOn38) .
BIND(?this AS ?pfs3t134) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfsb34) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfse35) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn37, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a33')) AS ?annotation33) .
BIND(?this AS ?pfs32) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch139 faldo:location ?templateMotifSequenceMatchRegionP0A763140 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763142 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451135 .
?templateMotifSequenceMatchRegionP0A763140 faldo:begin ?templateMotifSequenceMatchBeginP0A763141 .
?templateMotifSequenceMatchBeginP0A763141 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763136 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763142 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch143 faldo:location ?targetMotifMatchRegionMatch144 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451146 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451137 .
?targetMotifMatchRegionMatch144 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451145 .
?targetMotifMatchRegionMatchBeginMF_00451145 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451138 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451146 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451135, 1, (STRLEN(?templateMotifCigarP0A763MF_00451135) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451135, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionP0A763136) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1147) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451137, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451137) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451137, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451137, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451137) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451137, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), '')))), '[^-]', ''))) AS ?step2148) .
BIND(((?step2148 + ?targetMotifMatchRegionMatchBeginPositionMF_00451138) - 1) AS ?thisPositionOn44) .
BIND(?thisPositionOn44 AS ?thisPositionOn45) .
BIND(?this AS ?pfs3t149) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb41) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse42) .
FILTER (REGEX('[FY]', SUBSTR(?thisSequenceValue, ?thisPositionOn44, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a40')) AS ?annotation40) .
BIND(?this AS ?pfs39) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch154 faldo:location ?templateMotifSequenceMatchRegionP0A763155 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763157 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451150 .
?templateMotifSequenceMatchRegionP0A763155 faldo:begin ?templateMotifSequenceMatchBeginP0A763156 .
?templateMotifSequenceMatchBeginP0A763156 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763151 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763157 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch158 faldo:location ?targetMotifMatchRegionMatch159 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451161 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451152 .
?targetMotifMatchRegionMatch159 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451160 .
?targetMotifMatchRegionMatchBeginMF_00451160 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451153 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451161 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451150, 1, (STRLEN(?templateMotifCigarP0A763MF_00451150) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451150, CONCAT('^(?:-*[^-]){', STR(((87 - ?templateMotifSequenceMatchBeginPositionP0A763151) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1162) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451152, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451152) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451152, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451152) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), '')))), '[^-]', ''))) AS ?step2163) .
BIND(((?step2163 + ?targetMotifMatchRegionMatchBeginPositionMF_00451153) - 1) AS ?thisPositionOn51) .
BIND(?thisPositionOn51 AS ?thisPositionOn52) .
BIND(?this AS ?pfs3t164) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a47')) AS ?annotation47) .
BIND(?this AS ?pfs46) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch169 faldo:location ?templateMotifSequenceMatchRegionP0A763170 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763172 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451165 .
?templateMotifSequenceMatchRegionP0A763170 faldo:begin ?templateMotifSequenceMatchBeginP0A763171 .
?templateMotifSequenceMatchBeginP0A763171 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763166 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763172 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch173 faldo:location ?targetMotifMatchRegionMatch174 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451176 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451167 .
?targetMotifMatchRegionMatch174 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451175 .
?targetMotifMatchRegionMatchBeginMF_00451175 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451168 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451176 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451165, 1, (STRLEN(?templateMotifCigarP0A763MF_00451165) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451165, CONCAT('^(?:-*[^-]){', STR(((93 - ?templateMotifSequenceMatchBeginPositionP0A763166) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1177) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451167, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451167) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451167, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1177), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451167, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451167) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451167, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1177), '}'), '')))), '[^-]', ''))) AS ?step2178) .
BIND(((?step2178 + ?targetMotifMatchRegionMatchBeginPositionMF_00451168) - 1) AS ?thisPositionOn58) .
BIND(?thisPositionOn58 AS ?thisPositionOn59) .
BIND(?this AS ?pfs3t179) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb55) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse56) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn58, 1) = 'T')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a54')) AS ?annotation54) .
BIND(?this AS ?pfs53) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch184 faldo:location ?templateMotifSequenceMatchRegionP0A763185 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763187 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451180 .
?templateMotifSequenceMatchRegionP0A763185 faldo:begin ?templateMotifSequenceMatchBeginP0A763186 .
?templateMotifSequenceMatchBeginP0A763186 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763181 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763187 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch188 faldo:location ?targetMotifMatchRegionMatch189 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451191 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451182 .
?targetMotifMatchRegionMatch189 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451190 .
?targetMotifMatchRegionMatchBeginMF_00451190 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451183 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451191 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451180, 1, (STRLEN(?templateMotifCigarP0A763MF_00451180) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451180, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionP0A763181) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1192) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451182, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451182) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451182, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451182) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451182, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), '')))), '[^-]', ''))) AS ?step2193) .
BIND(((?step2193 + ?targetMotifMatchRegionMatchBeginPositionMF_00451183) - 1) AS ?thisPositionOn65) .
BIND(?thisPositionOn65 AS ?thisPositionOn66) .
BIND(?this AS ?pfs3t194) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfsb62) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfse63) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn65, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a61')) AS ?annotation61) .
BIND(?this AS ?pfs60) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch199 faldo:location ?templateMotifSequenceMatchRegionP0A763200 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A763202 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A763MF_00451195 .
?templateMotifSequenceMatchRegionP0A763200 faldo:begin ?templateMotifSequenceMatchBeginP0A763201 .
?templateMotifSequenceMatchBeginP0A763201 faldo:position ?templateMotifSequenceMatchBeginPositionP0A763196 ;
faldo:reference isoform:P0A763-1 .
?templateMotifSequenceProfileAlignmentOperationP0A763202 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
?targetMotifMatch203 faldo:location ?targetMotifMatchRegionMatch204 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00451206 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A763MF_00451197 .
?targetMotifMatchRegionMatch204 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00451205 .
?targetMotifMatchRegionMatchBeginMF_00451205 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00451198 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00451206 edam:has_input signature:MF_00451 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A763MF_00451195, 1, (STRLEN(?templateMotifCigarP0A763MF_00451195) - STRLEN(REPLACE(?templateMotifCigarP0A763MF_00451195, CONCAT('^(?:-*[^-]){', STR(((114 - ?templateMotifSequenceMatchBeginPositionP0A763196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1207) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A763MF_00451197, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451197) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A763MF_00451197, 1, (STRLEN(?targetMotifMatchCigarP0A763MF_00451197) - STRLEN(REPLACE(?targetMotifMatchCigarP0A763MF_00451197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), '')))), '[^-]', ''))) AS ?step2208) .
BIND(((?step2208 + ?targetMotifMatchRegionMatchBeginPositionMF_00451198) - 1) AS ?thisPositionOn72) .
BIND(?thisPositionOn72 AS ?thisPositionOn73) .
BIND(?this AS ?pfs3t209) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn72))) AS ?pfsb69) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfse70) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn72, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_00451a68')) AS ?annotation68) .
BIND(?this AS ?pfs67) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(?this AS ?case12) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag210) .
}
BIND(IF((BOUND(?tagFT_8) || BOUND(?tagFT_9)), ?caseWithTag210, ?UNBOUND_VARIABLE) AS ?case13) .
}
"xsd:string |
