| http://purl.uniprot.org/unirules/MF_01237#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:436346 up:source unirule:MF_01237 .
_:436347 up:source unirule:MF_01237 .
_:436348 up:source unirule:MF_01237 .
_:436349 up:source unirule:MF_01237 .
_:436350 up:source unirule:MF_01237 .
_:436351 up:source unirule:MF_01237 .
_:436352 up:source unirule:MF_01237 .
_:436353 up:source unirule:MF_01237 .
_:436354 up:source unirule:MF_01237 .
_:436355 up:source unirule:MF_01237 .
_:436356 up:source unirule:MF_01237 .
_:436357 up:source unirule:MF_01237 .
_:436358 up:source unirule:MF_01237 .
_:436359 up:source unirule:MF_01237 .
_:436360 up:source unirule:MF_01237 .
_:436361 up:source unirule:MF_01237 .
_:436362 up:source unirule:MF_01237 .
_:436363 up:source unirule:MF_01237 .
_:436364 up:source unirule:MF_01237 .
_:436365 up:source unirule:MF_01237 .
_:436366 up:source unirule:MF_01237 .
_:436367 up:source unirule:MF_01237 .
_:436368 up:source unirule:MF_01237 .
_:436369 up:source unirule:MF_01237 .
_:436370 up:source unirule:MF_01237 .
_:436371 up:source unirule:MF_01237 .
_:436372 up:source unirule:MF_01237 .
_:436373 up:source unirule:MF_01237 .
_:436374 up:source unirule:MF_01237 .
_:436375 up:source unirule:MF_01237 .
?this up:alternativeName ?name1 ,
?name2 ,
?name3 ,
?name4 ,
?name5 ;
up:annotation ?annotation7 ,
?annotation8 ,
?annotation10 ,
?annotation11 ,
?annotation12 ,
?annotation14 ;
up:classifiedWith GO:0005737 ,
GO:0005975 ,
GO:0008747 ,
GO:0019262 ,
keyword:119 ,
keyword:456 ,
keyword:704 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '4.1.3.3' ;
up:fullName 'N-acetylneuraminate lyase' ;
up:shortName 'Neu5Ac lyase' ,
'NAL' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'N-acetylneuraminate pyruvate-lyase' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'N-acetylneuraminic acid aldolase' ;
rdf:type up:Structured_Name .
?name3 up:fullName 'Sialate lyase' ;
rdf:type up:Structured_Name .
?name4 up:fullName 'Sialic acid aldolase' ;
rdf:type up:Structured_Name .
?name5 up:fullName 'Sialic acid lyase' ;
rdf:type up:Structured_Name .
?gene6 skos:prefLabel 'nanA' .
?annotation7 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.' .
?annotation8 up:activity ?activity9 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity9 up:catalyticActivity ;
up:enzymeClass .
?annotation10 a up:Pathway_Annotation ;
rdfs:comment 'Amino-sugar metabolism; N-acetylneuraminate degradation; D-fructose 6-phosphate from N-acetylneuraminate: step 1/5.' .
?annotation11 a up:Subunit_Annotation ;
rdfs:comment 'Homotetramer.' .
?annotation12 a up:Subcellular_Location_Annotation .
?annotation12li13 up:cellularComponent .
?annotation14 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the DapA family. NanA subfamily.' .
?pfs15 up:annotation ?annotation16 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor' .
?pfsb17 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfs21 up:annotation ?annotation22 .
?annotation22 faldo:begin ?pfsb23 ;
faldo:end ?pfse24 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Schiff-base intermediate with substrate' .
?pfsb23 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfse24 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfs27 up:annotation ?annotation28 .
?annotation28 faldo:begin ?pfsb29 ;
faldo:end ?pfse30 ;
up:ligand ?ligand31 ;
rdf:type up:Binding_Site_Annotation .
?pfsb29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse30 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?ligand31 rdfs:subClassOf chebi:173083 .
?pfs34 up:annotation ?annotation35 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
up:ligand ?ligand38 ;
rdf:type up:Binding_Site_Annotation .
?pfsb36 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?ligand38 rdfs:subClassOf chebi:173083 .
?pfs41 up:annotation ?annotation42 .
?annotation42 faldo:begin ?pfsb43 ;
faldo:end ?pfse44 ;
up:ligand ?ligand45 ;
rdf:type up:Binding_Site_Annotation .
?pfsb43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?pfse44 faldo:position ?thisPositionOn47 ;
rdf:type faldo:ExactPosition .
?ligand45 rdfs:subClassOf chebi:173083 .
?pfs48 up:annotation ?annotation49 .
?annotation49 faldo:begin ?pfsb50 ;
faldo:end ?pfse51 ;
up:ligand ?ligand52 ;
rdf:type up:Binding_Site_Annotation .
?pfsb50 faldo:position ?thisPositionOn53 ;
rdf:type faldo:ExactPosition .
?pfse51 faldo:position ?thisPositionOn54 ;
rdf:type faldo:ExactPosition .
?ligand52 rdfs:subClassOf chebi:173083 .
?pfs55 up:annotation ?annotation56 .
?annotation56 faldo:begin ?pfsb57 ;
faldo:end ?pfse58 ;
up:ligand ?ligand59 ;
rdf:type up:Binding_Site_Annotation .
?pfsb57 faldo:position ?thisPositionOn60 ;
rdf:type faldo:ExactPosition .
?pfse58 faldo:position ?thisPositionOn61 ;
rdf:type faldo:ExactPosition .
?ligand59 rdfs:subClassOf chebi:173083 .
?pfs62 up:annotation ?annotation63 .
?annotation63 faldo:begin ?pfsb64 ;
faldo:end ?pfse65 ;
up:ligand ?ligand66 ;
rdf:type up:Binding_Site_Annotation .
?pfsb64 faldo:position ?thisPositionOn67 ;
rdf:type faldo:ExactPosition .
?pfse65 faldo:position ?thisPositionOn68 ;
rdf:type faldo:ExactPosition .
?ligand66 rdfs:subClassOf chebi:173083 .
?pfs69 up:annotation ?annotation70 .
?annotation70 faldo:begin ?pfsb71 ;
faldo:end ?pfse72 ;
up:ligand ?ligand73 ;
rdf:type up:Binding_Site_Annotation .
?pfsb71 faldo:position ?thisPositionOn74 ;
rdf:type faldo:ExactPosition .
?pfse72 faldo:position ?thisPositionOn75 ;
rdf:type faldo:ExactPosition .
?ligand73 rdfs:subClassOf chebi:173083 .
_:436376 a rdf:Statement ;
up:attribution _:436346 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:436377 a rdf:Statement ;
up:attribution _:436347 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:436378 a rdf:Statement ;
up:attribution _:436348 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:436379 a rdf:Statement ;
up:attribution _:436349 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name3 .
_:436380 a rdf:Statement ;
up:attribution _:436350 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name4 .
_:436381 a rdf:Statement ;
up:attribution _:436351 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name5 .
_:436382 a rdf:Statement ;
up:attribution _:436352 ;
rdf:subject ?gene6 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene6 .
_:436383 a rdf:Statement ;
up:attribution _:436353 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:436384 a rdf:Statement ;
up:attribution _:436354 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:436385 a rdf:Statement ;
up:attribution _:436355 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:436386 a rdf:Statement ;
up:attribution _:436356 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:436387 a rdf:Statement ;
up:attribution _:436357 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:436388 a rdf:Statement ;
up:attribution _:436358 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:436389 a rdf:Statement ;
up:attribution _:436359 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:436390 a rdf:Statement ;
up:attribution _:436360 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:119 .
_:436391 a rdf:Statement ;
up:attribution _:436361 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:456 .
_:436392 a rdf:Statement ;
up:attribution _:436362 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:704 .
_:436393 a rdf:Statement ;
up:attribution _:436363 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008747 .
_:436394 a rdf:Statement ;
up:attribution _:436364 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005975 .
_:436395 a rdf:Statement ;
up:attribution _:436365 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019262 .
_:436396 a rdf:Statement ;
up:attribution _:436366 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:436397 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:436398 a rdf:Statement ;
up:attribution _:436367 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:436399 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs21 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
_:436400 a rdf:Statement ;
up:attribution _:436368 ;
rdf:subject ?pfs21 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
_:436401 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:436402 a rdf:Statement ;
up:attribution _:436369 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:436403 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:436404 a rdf:Statement ;
up:attribution _:436370 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:436405 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs41 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:436406 a rdf:Statement ;
up:attribution _:436371 ;
rdf:subject ?pfs41 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:436407 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs48 ;
rdf:predicate up:annotation ;
rdf:object ?annotation49 .
_:436408 a rdf:Statement ;
up:attribution _:436372 ;
rdf:subject ?pfs48 ;
rdf:predicate up:annotation ;
rdf:object ?annotation49 .
_:436409 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs55 ;
rdf:predicate up:annotation ;
rdf:object ?annotation56 .
_:436410 a rdf:Statement ;
up:attribution _:436373 ;
rdf:subject ?pfs55 ;
rdf:predicate up:annotation ;
rdf:object ?annotation56 .
_:436411 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs62 ;
rdf:predicate up:annotation ;
rdf:object ?annotation63 .
_:436412 a rdf:Statement ;
up:attribution _:436374 ;
rdf:subject ?pfs62 ;
rdf:predicate up:annotation ;
rdf:object ?annotation63 .
_:436413 a rdf:Statement ;
up:source unirule:MF_01237 ;
rdf:subject ?pfs69 ;
rdf:predicate up:annotation ;
rdf:object ?annotation70 .
_:436414 a rdf:Statement ;
up:attribution _:436375 ;
rdf:subject ?pfs69 ;
rdf:predicate up:annotation ;
rdf:object ?annotation70 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01237
#Rule MF_01237 Created by:? on:2005-02-28 Modified by:Elisabeth Coudert on:2024-05-02
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01237 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01237a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a3')) AS ?name3) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a4')) AS ?name4) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a5')) AS ?name5) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a11')) AS ?annotation11) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a12')) AS ?annotation12) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a14')) AS ?annotation14) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch80 faldo:location ?templateMotifSequenceMatchRegionP0A6L481 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L483 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_0123776 .
?templateMotifSequenceMatchRegionP0A6L481 faldo:begin ?templateMotifSequenceMatchBeginP0A6L482 .
?templateMotifSequenceMatchBeginP0A6L482 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L477 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L483 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch84 faldo:location ?targetMotifMatchRegionMatch85 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0123787 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_0123778 .
?targetMotifMatchRegionMatch85 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0123786 .
?targetMotifMatchRegionMatchBeginMF_0123786 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0123779 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0123787 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_0123776, 1, (STRLEN(?templateMotifCigarP0A6L4MF_0123776) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_0123776, CONCAT('^(?:-*[^-]){', STR(((137 - ?templateMotifSequenceMatchBeginPositionP0A6L477) + 1)), '}'), '')))), '[a-z]', '')) AS ?step188) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_0123778, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_0123778) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_0123778, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step188), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_0123778, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_0123778) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_0123778, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step188), '}'), '')))), '[^-]', ''))) AS ?step289) .
BIND(((?step289 + ?targetMotifMatchRegionMatchBeginPositionMF_0123779) - 1) AS ?thisPositionOn19) .
BIND(?thisPositionOn19 AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t90) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse18) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn19, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a16')) AS ?annotation16) .
BIND(?this AS ?pfs15) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch95 faldo:location ?templateMotifSequenceMatchRegionP0A6L496 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L498 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_0123791 .
?templateMotifSequenceMatchRegionP0A6L496 faldo:begin ?templateMotifSequenceMatchBeginP0A6L497 .
?templateMotifSequenceMatchBeginP0A6L497 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L492 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L498 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch99 faldo:location ?targetMotifMatchRegionMatch100 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237102 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_0123793 .
?targetMotifMatchRegionMatch100 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237101 .
?targetMotifMatchRegionMatchBeginMF_01237101 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0123794 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237102 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_0123791, 1, (STRLEN(?templateMotifCigarP0A6L4MF_0123791) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_0123791, CONCAT('^(?:-*[^-]){', STR(((165 - ?templateMotifSequenceMatchBeginPositionP0A6L492) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1103) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_0123793, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_0123793) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_0123793, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1103), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_0123793, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_0123793) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_0123793, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1103), '}'), '')))), '[^-]', ''))) AS ?step2104) .
BIND(((?step2104 + ?targetMotifMatchRegionMatchBeginPositionMF_0123794) - 1) AS ?thisPositionOn25) .
BIND(?thisPositionOn25 AS ?thisPositionOn26) .
BIND(?this AS ?pfs1t105) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb23) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse24) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a22')) AS ?annotation22) .
BIND(?this AS ?pfs21) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch110 faldo:location ?templateMotifSequenceMatchRegionP0A6L4111 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4113 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237106 .
?templateMotifSequenceMatchRegionP0A6L4111 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4112 .
?templateMotifSequenceMatchBeginP0A6L4112 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4107 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4113 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch114 faldo:location ?targetMotifMatchRegionMatch115 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237117 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237108 .
?targetMotifMatchRegionMatch115 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237116 .
?targetMotifMatchRegionMatchBeginMF_01237116 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237109 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237117 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237106, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237106) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237106, CONCAT('^(?:-*[^-]){', STR(((47 - ?templateMotifSequenceMatchBeginPositionP0A6L4107) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1118) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237108, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237108) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237108, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237108, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237108) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237108, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1118), '}'), '')))), '[^-]', ''))) AS ?step2119) .
BIND(((?step2119 + ?targetMotifMatchRegionMatchBeginPositionMF_01237109) - 1) AS ?thisPositionOn32) .
BIND(?thisPositionOn32 AS ?thisPositionOn33) .
BIND(?this AS ?pfs1t120) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a28')) AS ?annotation28) .
BIND(?this AS ?pfs27) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch125 faldo:location ?templateMotifSequenceMatchRegionP0A6L4126 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4128 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237121 .
?templateMotifSequenceMatchRegionP0A6L4126 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4127 .
?templateMotifSequenceMatchBeginP0A6L4127 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4122 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4128 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch129 faldo:location ?targetMotifMatchRegionMatch130 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237132 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237123 .
?targetMotifMatchRegionMatch130 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237131 .
?targetMotifMatchRegionMatchBeginMF_01237131 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237124 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237132 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237121, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237121) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237121, CONCAT('^(?:-*[^-]){', STR(((48 - ?templateMotifSequenceMatchBeginPositionP0A6L4122) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1133) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237123, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237123) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237123, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237123) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237123, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1133), '}'), '')))), '[^-]', ''))) AS ?step2134) .
BIND(((?step2134 + ?targetMotifMatchRegionMatchBeginPositionMF_01237124) - 1) AS ?thisPositionOn39) .
BIND(?thisPositionOn39 AS ?thisPositionOn40) .
BIND(?this AS ?pfs1t135) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) .
FILTER (REGEX('[TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a35')) AS ?annotation35) .
BIND(?this AS ?pfs34) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch140 faldo:location ?templateMotifSequenceMatchRegionP0A6L4141 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4143 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237136 .
?templateMotifSequenceMatchRegionP0A6L4141 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4142 .
?templateMotifSequenceMatchBeginP0A6L4142 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4137 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4143 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch144 faldo:location ?targetMotifMatchRegionMatch145 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237147 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237138 .
?targetMotifMatchRegionMatch145 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237146 .
?targetMotifMatchRegionMatchBeginMF_01237146 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237139 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237147 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237136, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237136) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237136, CONCAT('^(?:-*[^-]){', STR(((167 - ?templateMotifSequenceMatchBeginPositionP0A6L4137) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1148) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237138, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237138) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1148), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237138, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237138) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237138, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1148), '}'), '')))), '[^-]', ''))) AS ?step2149) .
BIND(((?step2149 + ?targetMotifMatchRegionMatchBeginPositionMF_01237139) - 1) AS ?thisPositionOn46) .
BIND(?thisPositionOn46 AS ?thisPositionOn47) .
BIND(?this AS ?pfs1t150) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb43) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse44) .
FILTER (REGEX('[TS]', SUBSTR(?thisSequenceValue, ?thisPositionOn46, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a42')) AS ?annotation42) .
BIND(?this AS ?pfs41) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch155 faldo:location ?templateMotifSequenceMatchRegionP0A6L4156 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4158 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237151 .
?templateMotifSequenceMatchRegionP0A6L4156 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4157 .
?templateMotifSequenceMatchBeginP0A6L4157 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4152 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4158 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch159 faldo:location ?targetMotifMatchRegionMatch160 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237162 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237153 .
?targetMotifMatchRegionMatch160 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237161 .
?targetMotifMatchRegionMatchBeginMF_01237161 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237154 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237162 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237151, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237151) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237151, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionP0A6L4152) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1163) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237153, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237153) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237153, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1163), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237153, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237153) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237153, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1163), '}'), '')))), '[^-]', ''))) AS ?step2164) .
BIND(((?step2164 + ?targetMotifMatchRegionMatchBeginPositionMF_01237154) - 1) AS ?thisPositionOn53) .
BIND(?thisPositionOn53 AS ?thisPositionOn54) .
BIND(?this AS ?pfs1t165) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfsb50) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfse51) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn53, 1) = 'G')) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a49')) AS ?annotation49) .
BIND(?this AS ?pfs48) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch170 faldo:location ?templateMotifSequenceMatchRegionP0A6L4171 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4173 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237166 .
?templateMotifSequenceMatchRegionP0A6L4171 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4172 .
?templateMotifSequenceMatchBeginP0A6L4172 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4167 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4173 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch174 faldo:location ?targetMotifMatchRegionMatch175 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237177 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237168 .
?targetMotifMatchRegionMatch175 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237176 .
?targetMotifMatchRegionMatchBeginMF_01237176 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237169 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237177 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237166, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237166) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237166, CONCAT('^(?:-*[^-]){', STR(((191 - ?templateMotifSequenceMatchBeginPositionP0A6L4167) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1178) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237168, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237168) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237168, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237168, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237168) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237168, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), '')))), '[^-]', ''))) AS ?step2179) .
BIND(((?step2179 + ?targetMotifMatchRegionMatchBeginPositionMF_01237169) - 1) AS ?thisPositionOn60) .
BIND(?thisPositionOn60 AS ?thisPositionOn61) .
BIND(?this AS ?pfs1t180) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfsb57) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfse58) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn60, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a56')) AS ?annotation56) .
BIND(?this AS ?pfs55) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch185 faldo:location ?templateMotifSequenceMatchRegionP0A6L4186 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4188 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237181 .
?templateMotifSequenceMatchRegionP0A6L4186 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4187 .
?templateMotifSequenceMatchBeginP0A6L4187 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4182 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4188 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch189 faldo:location ?targetMotifMatchRegionMatch190 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237192 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237183 .
?targetMotifMatchRegionMatch190 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237191 .
?targetMotifMatchRegionMatchBeginMF_01237191 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237184 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237192 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237181, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237181) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237181, CONCAT('^(?:-*[^-]){', STR(((192 - ?templateMotifSequenceMatchBeginPositionP0A6L4182) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1193) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237183, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237183) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237183, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1193), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237183, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237183) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237183, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1193), '}'), '')))), '[^-]', ''))) AS ?step2194) .
BIND(((?step2194 + ?targetMotifMatchRegionMatchBeginPositionMF_01237184) - 1) AS ?thisPositionOn67) .
BIND(?thisPositionOn67 AS ?thisPositionOn68) .
BIND(?this AS ?pfs1t195) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb64) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse65) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a63')) AS ?annotation63) .
BIND(?this AS ?pfs62) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch200 faldo:location ?templateMotifSequenceMatchRegionP0A6L4201 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A6L4203 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A6L4MF_01237196 .
?templateMotifSequenceMatchRegionP0A6L4201 faldo:begin ?templateMotifSequenceMatchBeginP0A6L4202 .
?templateMotifSequenceMatchBeginP0A6L4202 faldo:position ?templateMotifSequenceMatchBeginPositionP0A6L4197 ;
faldo:reference isoform:P0A6L4-1 .
?templateMotifSequenceProfileAlignmentOperationP0A6L4203 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
?targetMotifMatch204 faldo:location ?targetMotifMatchRegionMatch205 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01237207 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A6L4MF_01237198 .
?targetMotifMatchRegionMatch205 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01237206 .
?targetMotifMatchRegionMatchBeginMF_01237206 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01237199 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01237207 edam:has_input signature:MF_01237 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A6L4MF_01237196, 1, (STRLEN(?templateMotifCigarP0A6L4MF_01237196) - STRLEN(REPLACE(?templateMotifCigarP0A6L4MF_01237196, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionP0A6L4197) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1208) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237198, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237198) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237198, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1208), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A6L4MF_01237198, 1, (STRLEN(?targetMotifMatchCigarP0A6L4MF_01237198) - STRLEN(REPLACE(?targetMotifMatchCigarP0A6L4MF_01237198, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1208), '}'), '')))), '[^-]', ''))) AS ?step2209) .
BIND(((?step2209 + ?targetMotifMatchRegionMatchBeginPositionMF_01237199) - 1) AS ?thisPositionOn74) .
BIND(?thisPositionOn74 AS ?thisPositionOn75) .
BIND(?this AS ?pfs1t210) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) .
FILTER (REGEX('[SG]', SUBSTR(?thisSequenceValue, ?thisPositionOn74, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01237a70')) AS ?annotation70) .
BIND(?this AS ?pfs69) .
}
}
"xsd:string |
