| http://purl.uniprot.org/unirules/MF_03155#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:847992 up:source unirule:MF_03155 .
_:847993 up:source unirule:MF_03155 .
_:847994 up:source unirule:MF_03155 .
_:847995 up:source unirule:MF_03155 .
_:847996 up:source unirule:MF_03155 .
_:847997 up:source unirule:MF_03155 .
_:847998 up:source unirule:MF_03155 .
_:847999 up:source unirule:MF_03155 .
_:848000 up:source unirule:MF_03155 .
_:848001 up:source unirule:MF_03155 .
_:848002 up:source unirule:MF_03155 .
_:848003 up:source unirule:MF_03155 .
_:848004 up:source unirule:MF_03155 .
_:848005 up:source unirule:MF_03155 .
_:848006 up:source unirule:MF_03155 .
_:848007 up:source unirule:MF_03155 .
_:848008 up:source unirule:MF_03155 .
_:848009 up:source unirule:MF_03155 .
_:848010 up:source unirule:MF_03155 .
_:848011 up:source unirule:MF_03155 .
_:848012 up:source unirule:MF_03155 .
_:848013 up:source unirule:MF_03155 .
_:848014 up:source unirule:MF_03155 .
_:848015 up:source unirule:MF_03155 .
_:848016 up:source unirule:MF_03155 .
_:848017 up:source unirule:MF_03155 .
_:848018 up:source unirule:MF_03155 .
_:848019 up:source unirule:MF_03155 .
_:848020 up:source unirule:MF_03155 .
?this up:annotation ?annotation0 ,
?annotation3 ,
?annotation4 ;
up:classifiedWith GO:0005634 ,
GO:0005737 ,
keyword:328 ,
keyword:539 ,
keyword:660 ,
keyword:808 ,
keyword:963 .
?annotation0 a up:Subcellular_Location_Annotation .
?annotation0li1 up:cellularComponent .
?annotation0li2 up:cellularComponent .
?annotation3 a up:Subunit_Annotation ;
rdfs:comment 'Homotrimer.' .
?annotation4 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.' .
?case5 up:classifiedWith GO:0017061 ,
GO:0019509 .
?case6 up:alternativeName ?name8 ;
up:recommendedName ?name7 .
?name7 up:ecName '2.4.2.28' ;
up:fullName "S-methyl-5'-thioadenosine phosphorylase" ;
rdf:type up:Structured_Name .
?name8 up:fullName "5'-methylthioadenosine phosphorylase" ;
up:shortName 'MTA phosphorylase' ,
'MTAPase' ,
'MTAP' ;
rdf:type up:Structured_Name .
?case9 up:alternativeName ?name11 ;
up:recommendedName ?name10 .
?name10 up:ecName '2.4.2.1' ;
up:fullName 'Probable 6-oxopurine nucleoside phosphorylase' ;
rdf:type up:Structured_Name .
?name11 up:fullName 'Purine nucleoside phosphorylase' ;
up:shortName 'PNP' ;
rdf:type up:Structured_Name .
?case12 up:classifiedWith GO:0006166 ,
GO:0016763 .
?case15 up:alternativeName ?name17 ;
up:recommendedName ?name16 .
?name16 up:ecName '2.4.2.44' ;
up:fullName "Probable S-methyl-5'-thioinosine phosphorylase" ;
rdf:type up:Structured_Name .
?name17 up:fullName "5'-methylthioinosine phosphorylase" ;
up:shortName 'MTI phosphorylase' ,
'MTIP' ;
rdf:type up:Structured_Name .
?case18 up:recommendedName ?name19 .
?name19 up:ecName '2.4.2.1' ;
up:fullName 'Purine nucleoside phosphorylase' ;
up:shortName 'PNP' ;
rdf:type up:Structured_Name .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf ?molecule25 .
?molecule25 rdfs:label 'substrate' .
?pfs28 up:annotation ?annotation29 .
?annotation29 faldo:begin ?pfsb30 ;
faldo:end ?pfse31 ;
rdf:type up:Site_Annotation ;
rdfs:comment 'Important for substrate specificity' .
?pfsb30 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse31 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?pfs34 up:annotation ?annotation35 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
rdf:type up:Site_Annotation ;
rdfs:comment 'Important for substrate specificity' .
?pfsb36 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?pfs40 up:annotation ?annotation41 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
up:ligand ?ligand44 ;
rdf:type up:Binding_Site_Annotation .
?pfsb42 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?ligand44 rdfs:subClassOf chebi:43474 .
?pfs47 up:annotation ?annotation48 .
?annotation48 faldo:begin ?pfsb49 ;
faldo:end ?pfse50 ;
up:ligand ?ligand51 ;
rdf:type up:Binding_Site_Annotation .
?pfsb49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?pfse50 faldo:position ?thisPositionOn53 ;
rdf:type faldo:ExactPosition .
?ligand51 rdfs:subClassOf chebi:43474 .
?pfs54 up:annotation ?annotation55 .
?annotation55 faldo:begin ?pfsb56 ;
faldo:end ?pfse57 ;
up:ligand ?ligand58 ;
rdf:type up:Binding_Site_Annotation .
?pfsb56 faldo:position ?thisPositionOn59 ;
rdf:type faldo:ExactPosition .
?pfse57 faldo:position ?thisPositionOn60 ;
rdf:type faldo:ExactPosition .
?ligand58 rdfs:subClassOf chebi:43474 .
?pfs61 up:annotation ?annotation62 .
?annotation62 faldo:begin ?pfsb63 ;
faldo:end ?pfse64 ;
up:ligand ?ligand65 ;
rdf:type up:Binding_Site_Annotation .
?pfsb63 faldo:position ?thisPositionOn67 ;
rdf:type faldo:ExactPosition .
?pfse64 faldo:position ?thisPositionOn68 ;
rdf:type faldo:ExactPosition .
?ligand65 rdfs:subClassOf ?molecule66 .
?molecule66 rdfs:label 'substrate' .
?pfs69 up:annotation ?annotation70 .
?annotation70 faldo:begin ?pfsb71 ;
faldo:end ?pfse72 ;
up:ligand ?ligand73 ;
rdf:type up:Binding_Site_Annotation .
?pfsb71 faldo:position ?thisPositionOn74 ;
rdf:type faldo:ExactPosition .
?pfse72 faldo:position ?thisPositionOn75 ;
rdf:type faldo:ExactPosition .
?ligand73 rdfs:subClassOf chebi:43474 .
_:848021 a rdf:Statement ;
up:attribution _:847992 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation0 .
_:848022 a rdf:Statement ;
up:attribution _:847993 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:848023 a rdf:Statement ;
up:attribution _:847994 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:848024 a rdf:Statement ;
up:attribution _:847995 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:848025 a rdf:Statement ;
up:attribution _:847996 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:328 .
_:848026 a rdf:Statement ;
up:attribution _:847997 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:539 .
_:848027 a rdf:Statement ;
up:attribution _:847998 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:660 .
_:848028 a rdf:Statement ;
up:attribution _:847999 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:848029 a rdf:Statement ;
up:attribution _:848000 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:848030 a rdf:Statement ;
up:attribution _:848001 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005634 .
_:848031 a rdf:Statement ;
up:attribution _:848002 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0017061 .
_:848032 a rdf:Statement ;
up:attribution _:848003 ;
rdf:subject ?case5 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019509 .
_:848033 a rdf:Statement ;
up:attribution _:848004 ;
rdf:subject ?case6 ;
rdf:predicate up:recommendedName ;
rdf:object ?name7 .
_:848034 a rdf:Statement ;
up:attribution _:848005 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name8 .
_:848035 a rdf:Statement ;
up:attribution _:848006 ;
rdf:subject ?case9 ;
rdf:predicate up:recommendedName ;
rdf:object ?name10 .
_:848036 a rdf:Statement ;
up:attribution _:848007 ;
rdf:subject ?case9 ;
rdf:predicate up:alternativeName ;
rdf:object ?name11 .
_:848037 a rdf:Statement ;
up:attribution _:848008 ;
rdf:subject ?case12 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016763 .
_:848038 a rdf:Statement ;
up:attribution _:848009 ;
rdf:subject ?case12 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006166 .
_:848039 a rdf:Statement ;
up:attribution _:848010 ;
rdf:subject ?case15 ;
rdf:predicate up:recommendedName ;
rdf:object ?name16 .
_:848040 a rdf:Statement ;
up:attribution _:848011 ;
rdf:subject ?case15 ;
rdf:predicate up:alternativeName ;
rdf:object ?name17 .
_:848041 a rdf:Statement ;
up:attribution _:848012 ;
rdf:subject ?case18 ;
rdf:predicate up:recommendedName ;
rdf:object ?name19 .
_:848042 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:848043 a rdf:Statement ;
up:attribution _:848013 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:848044 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:848045 a rdf:Statement ;
up:attribution _:848014 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:848046 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:848047 a rdf:Statement ;
up:attribution _:848015 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:848048 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:848049 a rdf:Statement ;
up:attribution _:848016 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:848050 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs47 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:848051 a rdf:Statement ;
up:attribution _:848017 ;
rdf:subject ?pfs47 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:848052 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:848053 a rdf:Statement ;
up:attribution _:848018 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:848054 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs61 ;
rdf:predicate up:annotation ;
rdf:object ?annotation62 .
_:848055 a rdf:Statement ;
up:attribution _:848019 ;
rdf:subject ?pfs61 ;
rdf:predicate up:annotation ;
rdf:object ?annotation62 .
_:848056 a rdf:Statement ;
up:source unirule:MF_03155 ;
rdf:subject ?pfs69 ;
rdf:predicate up:annotation ;
rdf:object ?annotation70 .
_:848057 a rdf:Statement ;
up:attribution _:848020 ;
rdf:subject ?pfs69 ;
rdf:predicate up:annotation ;
rdf:object ?annotation70 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03155
#Rule MF_03155 Created by:? on:2012-08-22 Modified by:Edouard de Castro on:2024-09-19
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01963 .
?thisOrganism rdfs:subClassOf+ taxon:2759 .
BIND(URI(CONCAT(STR(?this), '#MF_03155a0')) AS ?annotation0) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a4')) AS ?annotation4) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch80 faldo:location ?templateMotifSequenceMatchRegionQ97W9481 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97W9483 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ97W94MF_0196376 .
?templateMotifSequenceMatchRegionQ97W9481 faldo:begin ?templateMotifSequenceMatchBeginQ97W9482 .
?templateMotifSequenceMatchBeginQ97W9482 faldo:position ?templateMotifSequenceMatchBeginPositionQ97W9477 ;
faldo:reference isoform:Q97W94-1 .
?templateMotifSequenceProfileAlignmentOperationQ97W9483 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch84 faldo:location ?targetMotifMatchRegionMatch85 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0196387 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ97W94MF_0196378 .
?targetMotifMatchRegionMatch85 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0196386 .
?targetMotifMatchRegionMatchBeginMF_0196386 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0196379 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_0196387 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_3) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_0196376, 1, (STRLEN(?templateMotifCigarQ97W94MF_0196376) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_0196376, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionQ97W9477) + 1)), '}'), '')))), '[a-z]', '')) AS ?step188) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_0196378, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_0196378) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_0196378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step188), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_0196378, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_0196378) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_0196378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step188), '}'), '')))), '[^-]', ''))) AS ?step289) .
BIND(((?step289 + ?targetMotifMatchRegionMatchBeginPositionMF_0196379) - 1) AS ?thisPositionOn26) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_0196376, 1, (STRLEN(?templateMotifCigarQ97W94MF_0196376) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_0196376, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionQ97W9477) + 1)), '}'), '')))), '[a-z]', '')) AS ?step190) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_0196378, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_0196378) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_0196378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step190), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_0196378, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_0196378) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_0196378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step190), '}'), '')))), '[^-]', ''))) AS ?step291) .
BIND(((?step291 + ?targetMotifMatchRegionMatchBeginPositionMF_0196379) - 1) AS ?thisPositionOn27) .
BIND(?this AS ?pfs1t92) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse23) .
FILTER (REGEX('[DN][ARNDCQEGHILKMFPSTWYVBZJUOX][DA]', SUBSTR(?thisSequenceValue, ?thisPositionOn26, (?thisPositionOn27 - ?thisPositionOn26)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch97 faldo:location ?templateMotifSequenceMatchRegionQ8U2I198 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8U2I1100 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8U2I1MF_0196393 .
?templateMotifSequenceMatchRegionQ8U2I198 faldo:begin ?templateMotifSequenceMatchBeginQ8U2I199 .
?templateMotifSequenceMatchBeginQ8U2I199 faldo:position ?templateMotifSequenceMatchBeginPositionQ8U2I194 ;
faldo:reference isoform:Q8U2I1-1 .
?templateMotifSequenceProfileAlignmentOperationQ8U2I1100 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch101 faldo:location ?targetMotifMatchRegionMatch102 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963104 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8U2I1MF_0196395 .
?targetMotifMatchRegionMatch102 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963103 .
?targetMotifMatchRegionMatchBeginMF_01963103 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0196396 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963104 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_7) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8U2I1MF_0196393, 1, (STRLEN(?templateMotifCigarQ8U2I1MF_0196393) - STRLEN(REPLACE(?templateMotifCigarQ8U2I1MF_0196393, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionQ8U2I194) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1105) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8U2I1MF_0196395, 1, (STRLEN(?targetMotifMatchCigarQ8U2I1MF_0196395) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U2I1MF_0196395, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8U2I1MF_0196395, 1, (STRLEN(?targetMotifMatchCigarQ8U2I1MF_0196395) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U2I1MF_0196395, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1105), '}'), '')))), '[^-]', ''))) AS ?step2106) .
BIND(((?step2106 + ?targetMotifMatchRegionMatchBeginPositionMF_0196396) - 1) AS ?thisPositionOn32) .
BIND(?thisPositionOn32 AS ?thisPositionOn33) .
BIND(?this AS ?pfs2t107) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse31) .
FILTER (REGEX('[SE]', SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a29')) AS ?annotation29) .
BIND(?this AS ?pfs28) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch112 faldo:location ?templateMotifSequenceMatchRegionQ8U2I1113 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ8U2I1115 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ8U2I1MF_01963108 .
?templateMotifSequenceMatchRegionQ8U2I1113 faldo:begin ?templateMotifSequenceMatchBeginQ8U2I1114 .
?templateMotifSequenceMatchBeginQ8U2I1114 faldo:position ?templateMotifSequenceMatchBeginPositionQ8U2I1109 ;
faldo:reference isoform:Q8U2I1-1 .
?templateMotifSequenceProfileAlignmentOperationQ8U2I1115 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch116 faldo:location ?targetMotifMatchRegionMatch117 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963119 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ8U2I1MF_01963110 .
?targetMotifMatchRegionMatch117 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963118 .
?targetMotifMatchRegionMatchBeginMF_01963118 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01963111 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963119 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFT_8) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ8U2I1MF_01963108, 1, (STRLEN(?templateMotifCigarQ8U2I1MF_01963108) - STRLEN(REPLACE(?templateMotifCigarQ8U2I1MF_01963108, CONCAT('^(?:-*[^-]){', STR(((223 - ?templateMotifSequenceMatchBeginPositionQ8U2I1109) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1120) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ8U2I1MF_01963110, 1, (STRLEN(?targetMotifMatchCigarQ8U2I1MF_01963110) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U2I1MF_01963110, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1120), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ8U2I1MF_01963110, 1, (STRLEN(?targetMotifMatchCigarQ8U2I1MF_01963110) - STRLEN(REPLACE(?targetMotifMatchCigarQ8U2I1MF_01963110, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1120), '}'), '')))), '[^-]', ''))) AS ?step2121) .
BIND(((?step2121 + ?targetMotifMatchRegionMatchBeginPositionMF_01963111) - 1) AS ?thisPositionOn38) .
BIND(?thisPositionOn38 AS ?thisPositionOn39) .
BIND(?this AS ?pfs3t122) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse37) .
FILTER (BOUND(?thisPositionOn38)) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a35')) AS ?annotation35) .
BIND(?this AS ?pfs34) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch127 faldo:location ?templateMotifSequenceMatchRegionQ97W94128 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97W94130 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ97W94MF_01963123 .
?templateMotifSequenceMatchRegionQ97W94128 faldo:begin ?templateMotifSequenceMatchBeginQ97W94129 .
?templateMotifSequenceMatchBeginQ97W94129 faldo:position ?templateMotifSequenceMatchBeginPositionQ97W94124 ;
faldo:reference isoform:Q97W94-1 .
?templateMotifSequenceProfileAlignmentOperationQ97W94130 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch131 faldo:location ?targetMotifMatchRegionMatch132 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963134 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ97W94MF_01963125 .
?targetMotifMatchRegionMatch132 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963133 .
?targetMotifMatchRegionMatchBeginMF_01963133 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01963126 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963134 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963123, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963123) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963123, CONCAT('^(?:-*[^-]){', STR(((58 - ?templateMotifSequenceMatchBeginPositionQ97W94124) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1135) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963125, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963125) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963125, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963125) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1135), '}'), '')))), '[^-]', ''))) AS ?step2136) .
BIND(((?step2136 + ?targetMotifMatchRegionMatchBeginPositionMF_01963126) - 1) AS ?thisPositionOn45) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963123, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963123) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963123, CONCAT('^(?:-*[^-]){', STR(((59 - ?templateMotifSequenceMatchBeginPositionQ97W94124) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1137) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963125, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963125) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963125, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963125) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963125, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1137), '}'), '')))), '[^-]', ''))) AS ?step2138) .
BIND(((?step2138 + ?targetMotifMatchRegionMatchBeginPositionMF_01963126) - 1) AS ?thisPositionOn46) .
BIND(?this AS ?pfs4t139) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) .
FILTER (REGEX('R[HN]', SUBSTR(?thisSequenceValue, ?thisPositionOn45, (?thisPositionOn46 - ?thisPositionOn45)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a41')) AS ?annotation41) .
BIND(?this AS ?pfs40) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch144 faldo:location ?templateMotifSequenceMatchRegionQ97W94145 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97W94147 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ97W94MF_01963140 .
?templateMotifSequenceMatchRegionQ97W94145 faldo:begin ?templateMotifSequenceMatchBeginQ97W94146 .
?templateMotifSequenceMatchBeginQ97W94146 faldo:position ?templateMotifSequenceMatchBeginPositionQ97W94141 ;
faldo:reference isoform:Q97W94-1 .
?templateMotifSequenceProfileAlignmentOperationQ97W94147 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch148 faldo:location ?targetMotifMatchRegionMatch149 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963151 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ97W94MF_01963142 .
?targetMotifMatchRegionMatch149 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963150 .
?targetMotifMatchRegionMatchBeginMF_01963150 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01963143 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963151 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963140, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963140) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963140, CONCAT('^(?:-*[^-]){', STR(((91 - ?templateMotifSequenceMatchBeginPositionQ97W94141) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1152) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963142, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963142) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963142, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963142) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1152), '}'), '')))), '[^-]', ''))) AS ?step2153) .
BIND(((?step2153 + ?targetMotifMatchRegionMatchBeginPositionMF_01963143) - 1) AS ?thisPositionOn52) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963140, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963140) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963140, CONCAT('^(?:-*[^-]){', STR(((92 - ?templateMotifSequenceMatchBeginPositionQ97W94141) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1154) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963142, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963142) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963142, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963142) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963142, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1154), '}'), '')))), '[^-]', ''))) AS ?step2155) .
BIND(((?step2155 + ?targetMotifMatchRegionMatchBeginPositionMF_01963143) - 1) AS ?thisPositionOn53) .
BIND(?this AS ?pfs4t156) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) .
FILTER (REGEX('[ST]A', SUBSTR(?thisSequenceValue, ?thisPositionOn52, (?thisPositionOn53 - ?thisPositionOn52)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a48')) AS ?annotation48) .
BIND(?this AS ?pfs47) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch161 faldo:location ?templateMotifSequenceMatchRegionQ97W94162 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97W94164 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ97W94MF_01963157 .
?templateMotifSequenceMatchRegionQ97W94162 faldo:begin ?templateMotifSequenceMatchBeginQ97W94163 .
?templateMotifSequenceMatchBeginQ97W94163 faldo:position ?templateMotifSequenceMatchBeginPositionQ97W94158 ;
faldo:reference isoform:Q97W94-1 .
?templateMotifSequenceProfileAlignmentOperationQ97W94164 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch165 faldo:location ?targetMotifMatchRegionMatch166 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963168 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ97W94MF_01963159 .
?targetMotifMatchRegionMatch166 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963167 .
?targetMotifMatchRegionMatchBeginMF_01963167 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01963160 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963168 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963157, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963157) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963157, CONCAT('^(?:-*[^-]){', STR(((16 - ?templateMotifSequenceMatchBeginPositionQ97W94158) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1169) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963159, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963159) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963159, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963159, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963159) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963159, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1169), '}'), '')))), '[^-]', ''))) AS ?step2170) .
BIND(((?step2170 + ?targetMotifMatchRegionMatchBeginPositionMF_01963160) - 1) AS ?thisPositionOn59) .
BIND(?thisPositionOn59 AS ?thisPositionOn60) .
BIND(?this AS ?pfs4t171) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) .
FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn59, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a55')) AS ?annotation55) .
BIND(?this AS ?pfs54) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch176 faldo:location ?templateMotifSequenceMatchRegionQ97W94177 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97W94179 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ97W94MF_01963172 .
?templateMotifSequenceMatchRegionQ97W94177 faldo:begin ?templateMotifSequenceMatchBeginQ97W94178 .
?templateMotifSequenceMatchBeginQ97W94178 faldo:position ?templateMotifSequenceMatchBeginPositionQ97W94173 ;
faldo:reference isoform:Q97W94-1 .
?templateMotifSequenceProfileAlignmentOperationQ97W94179 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch180 faldo:location ?targetMotifMatchRegionMatch181 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963183 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ97W94MF_01963174 .
?targetMotifMatchRegionMatch181 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963182 .
?targetMotifMatchRegionMatchBeginMF_01963182 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01963175 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963183 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963172, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963172) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963172, CONCAT('^(?:-*[^-]){', STR(((190 - ?templateMotifSequenceMatchBeginPositionQ97W94173) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1184) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963174, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963174) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963174, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963174) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963174, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), '')))), '[^-]', ''))) AS ?step2185) .
BIND(((?step2185 + ?targetMotifMatchRegionMatchBeginPositionMF_01963175) - 1) AS ?thisPositionOn67) .
BIND(?thisPositionOn67 AS ?thisPositionOn68) .
BIND(?this AS ?pfs4t186) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfsb63) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfse64) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn67, 1) = 'M')) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a62')) AS ?annotation62) .
BIND(?this AS ?pfs61) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch191 faldo:location ?templateMotifSequenceMatchRegionQ97W94192 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ97W94194 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ97W94MF_01963187 .
?templateMotifSequenceMatchRegionQ97W94192 faldo:begin ?templateMotifSequenceMatchBeginQ97W94193 .
?templateMotifSequenceMatchBeginQ97W94193 faldo:position ?templateMotifSequenceMatchBeginPositionQ97W94188 ;
faldo:reference isoform:Q97W94-1 .
?templateMotifSequenceProfileAlignmentOperationQ97W94194 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
?targetMotifMatch195 faldo:location ?targetMotifMatchRegionMatch196 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01963198 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ97W94MF_01963189 .
?targetMotifMatchRegionMatch196 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01963197 .
?targetMotifMatchRegionMatchBeginMF_01963197 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01963190 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01963198 edam:has_input signature:MF_01963 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ97W94MF_01963187, 1, (STRLEN(?templateMotifCigarQ97W94MF_01963187) - STRLEN(REPLACE(?templateMotifCigarQ97W94MF_01963187, CONCAT('^(?:-*[^-]){', STR(((191 - ?templateMotifSequenceMatchBeginPositionQ97W94188) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1199) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963189, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963189) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963189, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ97W94MF_01963189, 1, (STRLEN(?targetMotifMatchCigarQ97W94MF_01963189) - STRLEN(REPLACE(?targetMotifMatchCigarQ97W94MF_01963189, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1199), '}'), '')))), '[^-]', ''))) AS ?step2200) .
BIND(((?step2200 + ?targetMotifMatchRegionMatchBeginPositionMF_01963190) - 1) AS ?thisPositionOn74) .
BIND(?thisPositionOn74 AS ?thisPositionOn75) .
BIND(?this AS ?pfs4t201) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb71) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse72) .
FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn74, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a70')) AS ?annotation70) .
BIND(?this AS ?pfs69) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag202) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag202, ?UNBOUND_VARIABLE) AS ?case5) .
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag203) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a7')) AS ?name7) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a8')) AS ?name8) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag203, ?UNBOUND_VARIABLE) AS ?case6) .
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag204) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a10')) AS ?name10) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a11')) AS ?name11) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag204, ?UNBOUND_VARIABLE) AS ?case9) .
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag205) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag205, ?UNBOUND_VARIABLE) AS ?case12) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(?this AS ?caseWithTag206) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag206, ?UNBOUND_VARIABLE) AS ?case13) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:147537 .
BIND(?this AS ?caseWithTag207) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag207, ?UNBOUND_VARIABLE) AS ?case14) .
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag208) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a16')) AS ?name16) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a17')) AS ?name17) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8) || BOUND(?tagFT_3) || BOUND(?tagFT_7)), ?caseWithTag208, ?UNBOUND_VARIABLE) AS ?case15) .
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag209) .
BIND(URI(CONCAT(STR(?this), '#MF_03155a19')) AS ?name19) .
}
BIND(IF((BOUND(?tagFT_3) || BOUND(?tagFT_7) || BOUND(?tagFT_8)), ?caseWithTag209, ?UNBOUND_VARIABLE) AS ?case18) .
}
"xsd:string |
