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http://purl.uniprot.org/unirules/MF_00095#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_00095#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_00095#construct-where-list-0
http://purl.uniprot.org/unirules/MF_00095#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_00095#construct-template-list-0
http://purl.uniprot.org/unirules/MF_00095#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:36636 up:source unirule:MF_00095 . _:36637 up:source unirule:MF_00095 . _:36638 up:source unirule:MF_00095 . _:36639 up:source unirule:MF_00095 . ?this up:annotation ?annotation1 . ?gene0 skos:prefLabel 'sfsA' . ?annotation1 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the SfsA family.' . ?case2 up:classifiedWith keyword:238 . ?pfs4 up:annotation ?annotation5 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; rdf:type up:Nucleotide_Binding_Annotation ; rdfs:comment 'H-T-H motif' . ?pfsb6 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . _:36640 a rdf:Statement ; up:attribution _:36636 ; rdf:subject ?gene0 ; rdf:predicate up:encodedBy ; rdf:object ?gene0 . _:36641 a rdf:Statement ; up:attribution _:36637 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:36642 a rdf:Statement ; up:attribution _:36638 ; rdf:subject ?case2 ; rdf:predicate up:classifiedWith ; rdf:object keyword:238 . _:36643 a rdf:Statement ; up:source unirule:MF_00095 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:36644 a rdf:Statement ; up:attribution _:36639 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_00095 #Rule MF_00095 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-06-01 VALUES ?supertaxon10 {taxon:2 taxon:2157} ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_00095 . ?thisOrganism rdfs:subClassOf+ ?supertaxon10 . BIND(URI(CONCAT(STR(?this), '#MF_00095a1')) AS ?annotation1) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch16 faldo:location ?templateMotifSequenceMatchRegionP0A82317 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A82319 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP0A823MF_0009512 . ?templateMotifSequenceMatchRegionP0A82317 faldo:begin ?templateMotifSequenceMatchBeginP0A82318 . ?templateMotifSequenceMatchBeginP0A82318 faldo:position ?templateMotifSequenceMatchBeginPositionP0A82313 ; faldo:reference isoform:P0A823-1 . ?templateMotifSequenceProfileAlignmentOperationP0A82319 edam:has_input signature:MF_00095 ; rdf:type edam:operation_0300 . ?targetMotifMatch20 faldo:location ?targetMotifMatchRegionMatch21 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0009523 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP0A823MF_0009514 . ?targetMotifMatchRegionMatch21 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0009522 . ?targetMotifMatchRegionMatchBeginMF_0009522 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0009515 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0009523 edam:has_input signature:MF_00095 ; rdf:type edam:operation_0300 . VALUES ?supertaxon11 {taxon:590 taxon:561 taxon:620} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon11 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A823MF_0009512, 1, (STRLEN(?templateMotifCigarP0A823MF_0009512) - STRLEN(REPLACE(?templateMotifCigarP0A823MF_0009512, CONCAT('^(?:-*[^-]){', STR(((201 - ?templateMotifSequenceMatchBeginPositionP0A82313) + 1)), '}'), '')))), '[a-z]', '')) AS ?step124) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A823MF_0009514, 1, (STRLEN(?targetMotifMatchCigarP0A823MF_0009514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A823MF_0009514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A823MF_0009514, 1, (STRLEN(?targetMotifMatchCigarP0A823MF_0009514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A823MF_0009514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step124), '}'), '')))), '[^-]', ''))) AS ?step225) . BIND(((?step225 + ?targetMotifMatchRegionMatchBeginPositionMF_0009515) - 1) AS ?thisPositionOn8) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A823MF_0009512, 1, (STRLEN(?templateMotifCigarP0A823MF_0009512) - STRLEN(REPLACE(?templateMotifCigarP0A823MF_0009512, CONCAT('^(?:-*[^-]){', STR(((220 - ?templateMotifSequenceMatchBeginPositionP0A82313) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A823MF_0009514, 1, (STRLEN(?targetMotifMatchCigarP0A823MF_0009514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A823MF_0009514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A823MF_0009514, 1, (STRLEN(?targetMotifMatchCigarP0A823MF_0009514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A823MF_0009514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0009515) - 1) AS ?thisPositionOn9) . BIND(?this AS ?pfs1t28) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfse7) . FILTER ((BOUND(?thisPositionOn8) && BOUND(?thisPositionOn9))) . BIND(URI(CONCAT(STR(?this), '#MF_00095a5')) AS ?annotation5) . BIND(?this AS ?pfs4) . } OPTIONAL { ?this a up:Protein . VALUES ?supertaxon29 {taxon:561 taxon:620 taxon:590} ?this up:organism ?thisOrganism . ?thisOrganism rdfs:subClassOf+ ?supertaxon29 . BIND(?this AS ?case2) . } OPTIONAL { ?this a up:Protein . ?this up:organism ?thisOrganism . FILTER (! (EXISTS { VALUES ?supertaxon30 {taxon:561 taxon:620 taxon:590} ?thisOrganism rdfs:subClassOf+ ?supertaxon30 . })) . BIND(?this AS ?case3) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_00095http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_00095#construct
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