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http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-18
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-7
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-30
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-5
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-13
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-27
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-26
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-11
http://purl.uniprot.org/unirules/MF_01111#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_01111#construct-template-31
http://purl.uniprot.org/unirules/MF_01111#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_01111#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_01111#construct-where-list-0
http://purl.uniprot.org/unirules/MF_01111#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_01111#construct-template-list-0
http://purl.uniprot.org/unirules/MF_01111#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:386646 up:source unirule:MF_01111 . _:386647 up:source unirule:MF_01111 . _:386648 up:source unirule:MF_01111 . _:386649 up:source unirule:MF_01111 . _:386650 up:source unirule:MF_01111 . _:386651 up:source unirule:MF_01111 . ?this up:annotation ?annotation2 ; up:classifiedWith GO:0005524 , keyword:547 , keyword:67 ; up:recommendedName ?name0 . ?name0 up:fullName ?nameValue1 ; rdf:type up:Structured_Name . ?annotation2 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the UPF0200 family.' . ?pfs3 up:annotation ?annotation4 . ?annotation4 faldo:begin ?pfsb5 ; faldo:end ?pfse6 ; up:ligand ?ligand7 ; rdf:type up:Binding_Site_Annotation . ?pfsb5 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfse6 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . ?ligand7 rdfs:subClassOf chebi:30616 . _:386652 a rdf:Statement ; up:attribution _:386646 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:386653 a rdf:Statement ; up:attribution _:386647 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:386654 a rdf:Statement ; up:attribution _:386648 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:67 . _:386655 a rdf:Statement ; up:attribution _:386649 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object keyword:547 . _:386656 a rdf:Statement ; up:attribution _:386650 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0005524 . _:386657 a rdf:Statement ; up:source unirule:MF_01111 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . _:386658 a rdf:Statement ; up:attribution _:386651 ; rdf:subject ?pfs3 ; rdf:predicate up:annotation ; rdf:object ?annotation4 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_01111 #Rule MF_01111 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2022-11-19 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_01111 . ?thisOrganism rdfs:subClassOf+ taxon:2157 . BIND(URI(CONCAT(STR(?this), '#MF_01111a0')) AS ?name0) . OPTIONAL { ?this up:encodedBy ?gene13 . ?gene13 up:locusName ?geneLocus11 . } OPTIONAL { ?this up:encodedBy ?gene13 . ?gene13 up:orfName ?geneOrf12 . } BIND(IF(BOUND(?geneLocus11), ?geneLocus11, ?geneOrf12) AS ?part10) . BIND(CONCAT('UPF0200 protein ', ?part10) AS ?nameValue1) . BIND(URI(CONCAT(STR(?this), '#MF_01111a2')) AS ?annotation2) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch18 faldo:location ?templateMotifSequenceMatchRegionQ5879419 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ5879421 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarQ58794MF_0111114 . ?templateMotifSequenceMatchRegionQ5879419 faldo:begin ?templateMotifSequenceMatchBeginQ5879420 . ?templateMotifSequenceMatchBeginQ5879420 faldo:position ?templateMotifSequenceMatchBeginPositionQ5879415 ; faldo:reference isoform:Q58794-1 . ?templateMotifSequenceProfileAlignmentOperationQ5879421 edam:has_input signature:MF_01111 ; rdf:type edam:operation_0300 . ?targetMotifMatch22 faldo:location ?targetMotifMatchRegionMatch23 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0111125 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarQ58794MF_0111116 . ?targetMotifMatchRegionMatch23 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0111124 . ?targetMotifMatchRegionMatchBeginMF_0111124 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0111117 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0111125 edam:has_input signature:MF_01111 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58794MF_0111114, 1, (STRLEN(?templateMotifCigarQ58794MF_0111114) - STRLEN(REPLACE(?templateMotifCigarQ58794MF_0111114, CONCAT('^(?:-*[^-]){', STR(((8 - ?templateMotifSequenceMatchBeginPositionQ5879415) + 1)), '}'), '')))), '[a-z]', '')) AS ?step126) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58794MF_0111116, 1, (STRLEN(?targetMotifMatchCigarQ58794MF_0111116) - STRLEN(REPLACE(?targetMotifMatchCigarQ58794MF_0111116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58794MF_0111116, 1, (STRLEN(?targetMotifMatchCigarQ58794MF_0111116) - STRLEN(REPLACE(?targetMotifMatchCigarQ58794MF_0111116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step126), '}'), '')))), '[^-]', ''))) AS ?step227) . BIND(((?step227 + ?targetMotifMatchRegionMatchBeginPositionMF_0111117) - 1) AS ?thisPositionOn8) . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ58794MF_0111114, 1, (STRLEN(?templateMotifCigarQ58794MF_0111114) - STRLEN(REPLACE(?templateMotifCigarQ58794MF_0111114, CONCAT('^(?:-*[^-]){', STR(((15 - ?templateMotifSequenceMatchBeginPositionQ5879415) + 1)), '}'), '')))), '[a-z]', '')) AS ?step128) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ58794MF_0111116, 1, (STRLEN(?targetMotifMatchCigarQ58794MF_0111116) - STRLEN(REPLACE(?targetMotifMatchCigarQ58794MF_0111116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ58794MF_0111116, 1, (STRLEN(?targetMotifMatchCigarQ58794MF_0111116) - STRLEN(REPLACE(?targetMotifMatchCigarQ58794MF_0111116, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step128), '}'), '')))), '[^-]', ''))) AS ?step229) . BIND(((?step229 + ?targetMotifMatchRegionMatchBeginPositionMF_0111117) - 1) AS ?thisPositionOn9) . BIND(?this AS ?pfs1t30) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfsb5) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfse6) . FILTER (REGEX('G[ARNDCQEGHILKMFPSTWYVBZJUOX]P[ARNDCQEGHILKMFPSTWYVBZJUOX][SA]GK[GSTD]', SUBSTR(?thisSequenceValue, ?thisPositionOn8, (?thisPositionOn9 - ?thisPositionOn8)))) . BIND(URI(CONCAT(STR(?this), '#MF_01111a4')) AS ?annotation4) . BIND(?this AS ?pfs3) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_01111http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_01111#construct
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