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http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-16
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-28
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-10
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-32
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-26
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-12
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-7
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-22
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-30
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-29
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-33
http://purl.uniprot.org/unirules/MF_04112#constructhttps://hamap.expasy.org/rdf/vocab#addsTriplehttp://purl.uniprot.org/unirules/MF_04112#construct-template-31
http://purl.uniprot.org/unirules/MF_04112#constructhttp://www.w3.org/ns/shacl#prefixeshttp://purl.uniprot.org/unirules/
http://purl.uniprot.org/unirules/MF_04112#constructhttp://spinrdf.org/sp#wherehttp://purl.uniprot.org/unirules/MF_04112#construct-where-list-0
http://purl.uniprot.org/unirules/MF_04112#constructhttp://spinrdf.org/sp#templateshttp://purl.uniprot.org/unirules/MF_04112#construct-template-list-0
http://purl.uniprot.org/unirules/MF_04112#constructhttp://www.w3.org/ns/shacl#construct"CONSTRUCT { _:956894 up:source unirule:MF_04112 . _:956895 up:source unirule:MF_04112 . _:956896 up:source unirule:MF_04112 . _:956897 up:source unirule:MF_04112 . _:956898 up:source unirule:MF_04112 . _:956899 up:source unirule:MF_04112 . ?this up:annotation ?annotation1 , ?annotation2 , ?annotation3 ; up:classifiedWith GO:0140678 ; up:recommendedName ?name0 . ?name0 up:fullName 'Lysis inhibition accessory protein' ; rdf:type up:Structured_Name . ?annotation1 a up:Function_Annotation ; rdfs:comment 'Probably binds to the cytoplasmic part of the holin during lysis inhibition and stabilizes the holin-antiholin complex thereby resulting in a robust block of the hole formation.' . ?annotation2 a up:Subunit_Annotation ; rdfs:comment 'Homooligomer. Interacts with holin (via N-terminus).' . ?annotation3 a up:Similarity_Annotation ; rdfs:comment 'Belongs to the T4likevirus lysis inhibition accessory protein rIII family.' . ?pfs4 up:annotation ?annotation5 . ?annotation5 faldo:begin ?pfsb6 ; faldo:end ?pfse7 ; rdf:type up:Site_Annotation ; rdfs:comment 'Interaction with holin' . ?pfsb6 faldo:position ?thisPositionOn8 ; rdf:type faldo:ExactPosition . ?pfse7 faldo:position ?thisPositionOn9 ; rdf:type faldo:ExactPosition . _:956900 a rdf:Statement ; up:attribution _:956894 ; rdf:subject ?this ; rdf:predicate up:recommendedName ; rdf:object ?name0 . _:956901 a rdf:Statement ; up:attribution _:956895 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation1 . _:956902 a rdf:Statement ; up:attribution _:956896 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation2 . _:956903 a rdf:Statement ; up:attribution _:956897 ; rdf:subject ?this ; rdf:predicate up:annotation ; rdf:object ?annotation3 . _:956904 a rdf:Statement ; up:attribution _:956898 ; rdf:subject ?this ; rdf:predicate up:classifiedWith ; rdf:object GO:0140678 . _:956905 a rdf:Statement ; up:source unirule:MF_04112 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . _:956906 a rdf:Statement ; up:attribution _:956899 ; rdf:subject ?pfs4 ; rdf:predicate up:annotation ; rdf:object ?annotation5 . } WHERE { #baseURI: http://purl.uniprot.org/unirule/MF_04112 #Rule MF_04112 Created by:? on:2016-11-02 Modified by:Catherine Rivoire on:2022-12-01 ?this up:organism ?thisOrganism ; rdfs:seeAlso signature:MF_04112 . ?thisOrganism rdfs:subClassOf+ taxon:2731619 . BIND(URI(CONCAT(STR(?this), '#MF_04112a0')) AS ?name0) . BIND(URI(CONCAT(STR(?this), '#MF_04112a1')) AS ?annotation1) . BIND(URI(CONCAT(STR(?this), '#MF_04112a2')) AS ?annotation2) . BIND(URI(CONCAT(STR(?this), '#MF_04112a3')) AS ?annotation3) . OPTIONAL { ?this up:sequence ?thisSequence . ?thisSequence rdf:value ?thisSequenceValue . ?templateMotifMatch14 faldo:location ?templateMotifSequenceMatchRegionP1730915 ; edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP1730917 ; rdf:type edam:data_0869 ; rdf:value ?templateMotifCigarP17309MF_0411210 . ?templateMotifSequenceMatchRegionP1730915 faldo:begin ?templateMotifSequenceMatchBeginP1730916 . ?templateMotifSequenceMatchBeginP1730916 faldo:position ?templateMotifSequenceMatchBeginPositionP1730911 ; faldo:reference isoform:P17309-1 . ?templateMotifSequenceProfileAlignmentOperationP1730917 edam:has_input signature:MF_04112 ; rdf:type edam:operation_0300 . ?targetMotifMatch18 faldo:location ?targetMotifMatchRegionMatch19 ; edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_0411221 ; rdf:type edam:data_0869 ; rdf:value ?targetMotifMatchCigarP17309MF_0411212 . ?targetMotifMatchRegionMatch19 faldo:begin ?targetMotifMatchRegionMatchBeginMF_0411220 . ?targetMotifMatchRegionMatchBeginMF_0411220 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0411213 ; faldo:reference ?thisSequence . ?targetMotifSequenceAlignmentOperationMF_0411221 edam:has_input signature:MF_04112 ; rdf:type edam:operation_0300 . BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP17309MF_0411210, 1, (STRLEN(?templateMotifCigarP17309MF_0411210) - STRLEN(REPLACE(?templateMotifCigarP17309MF_0411210, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionP1730911) + 1)), '}'), '')))), '[a-z]', '')) AS ?step122) . BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP17309MF_0411212, 1, (STRLEN(?targetMotifMatchCigarP17309MF_0411212) - STRLEN(REPLACE(?targetMotifMatchCigarP17309MF_0411212, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP17309MF_0411212, 1, (STRLEN(?targetMotifMatchCigarP17309MF_0411212) - STRLEN(REPLACE(?targetMotifMatchCigarP17309MF_0411212, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step122), '}'), '')))), '[^-]', ''))) AS ?step223) . BIND(((?step223 + ?targetMotifMatchRegionMatchBeginPositionMF_0411213) - 1) AS ?thisPositionOn8) . BIND(?thisPositionOn8 AS ?thisPositionOn9) . BIND(?this AS ?pfs1t24) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn8))) AS ?pfsb6) . BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn9))) AS ?pfse7) . FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn8, 1) = 'H')) . BIND(URI(CONCAT(STR(?this), '#MF_04112a5')) AS ?annotation5) . BIND(?this AS ?pfs4) . } } "xsd:string
http://purl.uniprot.org/unirules/MF_04112http://www.w3.org/ns/shacl#rulehttp://purl.uniprot.org/unirules/MF_04112#construct
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