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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_01043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01043#construct-template-235 |
| http://purl.uniprot.org/unirules/MF_01043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01043#construct-template-214 |
| http://purl.uniprot.org/unirules/MF_01043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01043#construct-template-238 |
| http://purl.uniprot.org/unirules/MF_01043#construct | https://hamap.expasy.org/rdf/vocab#addsTriple | http://purl.uniprot.org/unirules/MF_01043#construct-template-237 |
| http://purl.uniprot.org/unirules/MF_01043#construct | http://www.w3.org/ns/shacl#prefixes | http://purl.uniprot.org/unirules/ |
| http://purl.uniprot.org/unirules/MF_01043#construct | http://spinrdf.org/sp#where | http://purl.uniprot.org/unirules/MF_01043#construct-where-list-0 |
| http://purl.uniprot.org/unirules/MF_01043#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_01043#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_01043#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:366739 up:source unirule:MF_01043 .
_:366740 up:source unirule:MF_01043 .
_:366741 up:source unirule:MF_01043 .
_:366742 up:source unirule:MF_01043 .
_:366743 up:source unirule:MF_01043 .
_:366744 up:source unirule:MF_01043 .
_:366745 up:source unirule:MF_01043 .
_:366746 up:source unirule:MF_01043 .
_:366747 up:source unirule:MF_01043 .
_:366748 up:source unirule:MF_01043 .
_:366749 up:source unirule:MF_01043 .
_:366750 up:source unirule:MF_01043 .
_:366751 up:source unirule:MF_01043 .
_:366752 up:source unirule:MF_01043 .
_:366753 up:source unirule:MF_01043 .
_:366754 up:source unirule:MF_01043 .
_:366755 up:source unirule:MF_01043 .
_:366756 up:source unirule:MF_01043 .
_:366757 up:source unirule:MF_01043 .
_:366758 up:source unirule:MF_01043 .
_:366759 up:source unirule:MF_01043 .
_:366760 up:source unirule:MF_01043 .
_:366761 up:source unirule:MF_01043 .
_:366762 up:source unirule:MF_01043 .
_:366763 up:source unirule:MF_01043 .
_:366764 up:source unirule:MF_01043 .
_:366765 up:source unirule:MF_01043 .
_:366766 up:source unirule:MF_01043 .
_:366767 up:source unirule:MF_01043 .
_:366768 up:source unirule:MF_01043 .
_:366769 up:source unirule:MF_01043 .
_:366770 up:source unirule:MF_01043 .
_:366771 up:source unirule:MF_01043 .
_:366772 up:source unirule:MF_01043 .
_:366773 up:source unirule:MF_01043 .
_:366774 up:source unirule:MF_01043 .
_:366775 up:source unirule:MF_01043 .
_:366776 up:source unirule:MF_01043 .
_:366777 up:source unirule:MF_01043 .
?this up:annotation ?annotation1 ,
?annotation2 ,
?annotation3 ;
up:classifiedWith GO:0008654 ,
keyword:1003 ,
keyword:1133 ,
keyword:1208 ,
keyword:443 ,
keyword:444 ,
keyword:472 ,
keyword:594 ,
keyword:808 ,
keyword:812 .
?gene0 skos:prefLabel 'plsY' .
?annotation1 a up:Pathway_Annotation ;
rdfs:comment 'Lipid metabolism; phospholipid metabolism.' .
?annotation2 a up:Subunit_Annotation ;
rdfs:comment 'Probably interacts with PlsX.' .
?annotation3 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the PlsY family.' .
?case4 up:classifiedWith keyword:997 .
?case6 up:alternativeName ?name8 ,
?name9 ;
up:classifiedWith GO:0004366 ;
up:recommendedName ?name7 .
?name7 up:fullName 'Glycerol-3-phosphate acyltransferase' ;
rdf:type up:Structured_Name .
?name8 up:ecName '2.3.1.15' ,
'2.3.1.n5' ;
up:fullName 'G3P acyltransferase' ;
up:shortName 'GPAT' ;
rdf:type up:Structured_Name .
?name9 up:fullName 'Lysophosphatidic acid synthase' ;
up:shortName 'LPA synthase' ;
rdf:type up:Structured_Name .
?case10 up:alternativeName ?name12 ,
?name13 ,
?name14 ,
?name15 ;
up:classifiedWith GO:0043772 ;
up:recommendedName ?name11 .
?name11 up:fullName 'Glycerol-3-phosphate acyltransferase' ;
rdf:type up:Structured_Name .
?name12 up:fullName 'Acyl-PO4 G3P acyltransferase' ;
rdf:type up:Structured_Name .
?name13 up:fullName 'Acyl-phosphate--glycerol-3-phosphate acyltransferase' ;
rdf:type up:Structured_Name .
?name14 up:ecName '2.3.1.275' ;
up:fullName 'G3P acyltransferase' ;
up:shortName 'GPAT' ;
rdf:type up:Structured_Name .
?name15 up:fullName 'Lysophosphatidic acid synthase' ;
up:shortName 'LPA synthase' ;
rdf:type up:Structured_Name .
?pfs16 up:annotation ?annotation17 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?pfs22 up:annotation ?annotation23 .
?annotation23 faldo:begin ?pfsb24 ;
faldo:end ?pfse25 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb24 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse25 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?pfs28 up:annotation ?annotation29 .
?annotation29 faldo:begin ?pfsb30 ;
faldo:end ?pfse31 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb30 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse31 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?pfs34 up:annotation ?annotation35 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb36 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?pfs40 up:annotation ?annotation41 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb42 faldo:position ?thisPositionOn44 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfs46 up:annotation ?annotation47 .
?annotation47 faldo:begin ?pfsb48 ;
faldo:end ?pfse49 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb48 faldo:position ?thisPositionOn50 ;
rdf:type faldo:ExactPosition .
?pfse49 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?pfs52 up:annotation ?annotation53 .
?annotation53 faldo:begin ?pfsb54 ;
faldo:end ?pfse55 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb54 faldo:position ?thisPositionOn56 ;
rdf:type faldo:ExactPosition .
?pfse55 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?pfs58 up:annotation ?annotation59 .
?annotation59 faldo:begin ?pfsb60 ;
faldo:end ?pfse61 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb60 faldo:position ?thisPositionOn62 ;
rdf:type faldo:ExactPosition .
?pfse61 faldo:position ?thisPositionOn63 ;
rdf:type faldo:ExactPosition .
?pfs64 up:annotation ?annotation65 .
?annotation65 faldo:begin ?pfsb66 ;
faldo:end ?pfse67 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb66 faldo:position ?thisPositionOn68 ;
rdf:type faldo:ExactPosition .
?pfse67 faldo:position ?thisPositionOn69 ;
rdf:type faldo:ExactPosition .
?pfs70 up:annotation ?annotation71 .
?annotation71 faldo:begin ?pfsb72 ;
faldo:end ?pfse73 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb72 faldo:position ?thisPositionOn74 ;
rdf:type faldo:ExactPosition .
?pfse73 faldo:position ?thisPositionOn75 ;
rdf:type faldo:ExactPosition .
?pfs76 up:annotation ?annotation77 .
?annotation77 faldo:begin ?pfsb78 ;
faldo:end ?pfse79 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb78 faldo:position ?thisPositionOn80 ;
rdf:type faldo:ExactPosition .
?pfse79 faldo:position ?thisPositionOn81 ;
rdf:type faldo:ExactPosition .
?sam82 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane83 faldo:begin ?transmembraneb84 ;
faldo:end ?transmembranee85 .
?transmembraneb84 faldo:position ?transmembranebp86 .
?transmembranee85 faldo:position ?transmembraneep87 .
?keyword88 up:range ?transmembrane83 .
?keyword89 up:range ?transmembrane83 .
?keyword90 up:range ?transmembrane83 .
_:366778 a rdf:Statement ;
up:attribution _:366739 ;
rdf:subject ?gene0 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene0 .
_:366779 a rdf:Statement ;
up:attribution _:366740 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:366780 a rdf:Statement ;
up:attribution _:366741 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:366781 a rdf:Statement ;
up:attribution _:366742 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:366782 a rdf:Statement ;
up:attribution _:366743 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:366783 a rdf:Statement ;
up:attribution _:366744 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:444 .
_:366784 a rdf:Statement ;
up:attribution _:366745 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:443 .
_:366785 a rdf:Statement ;
up:attribution _:366746 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:366786 a rdf:Statement ;
up:attribution _:366747 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:594 .
_:366787 a rdf:Statement ;
up:attribution _:366748 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1208 .
_:366788 a rdf:Statement ;
up:attribution _:366749 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:366789 a rdf:Statement ;
up:attribution _:366750 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:366790 a rdf:Statement ;
up:attribution _:366751 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:366791 a rdf:Statement ;
up:attribution _:366752 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008654 .
_:366792 a rdf:Statement ;
up:attribution _:366753 ;
rdf:subject ?case4 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:366793 a rdf:Statement ;
up:attribution _:366754 ;
rdf:subject ?case6 ;
rdf:predicate up:recommendedName ;
rdf:object ?name7 .
_:366794 a rdf:Statement ;
up:attribution _:366755 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name8 .
_:366795 a rdf:Statement ;
up:attribution _:366756 ;
rdf:subject ?case6 ;
rdf:predicate up:alternativeName ;
rdf:object ?name9 .
_:366796 a rdf:Statement ;
up:attribution _:366757 ;
rdf:subject ?case6 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004366 .
_:366797 a rdf:Statement ;
up:attribution _:366758 ;
rdf:subject ?case10 ;
rdf:predicate up:recommendedName ;
rdf:object ?name11 .
_:366798 a rdf:Statement ;
up:attribution _:366759 ;
rdf:subject ?case10 ;
rdf:predicate up:alternativeName ;
rdf:object ?name12 .
_:366799 a rdf:Statement ;
up:attribution _:366760 ;
rdf:subject ?case10 ;
rdf:predicate up:alternativeName ;
rdf:object ?name13 .
_:366800 a rdf:Statement ;
up:attribution _:366761 ;
rdf:subject ?case10 ;
rdf:predicate up:alternativeName ;
rdf:object ?name14 .
_:366801 a rdf:Statement ;
up:attribution _:366762 ;
rdf:subject ?case10 ;
rdf:predicate up:alternativeName ;
rdf:object ?name15 .
_:366802 a rdf:Statement ;
up:attribution _:366763 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0043772 .
_:366803 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:366804 a rdf:Statement ;
up:attribution _:366764 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:366805 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:366806 a rdf:Statement ;
up:attribution _:366765 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:366807 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:366808 a rdf:Statement ;
up:attribution _:366766 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:366809 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:366810 a rdf:Statement ;
up:attribution _:366767 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:366811 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:366812 a rdf:Statement ;
up:attribution _:366768 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:366813 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs46 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:366814 a rdf:Statement ;
up:attribution _:366769 ;
rdf:subject ?pfs46 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:366815 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:366816 a rdf:Statement ;
up:attribution _:366770 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:366817 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs58 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
_:366818 a rdf:Statement ;
up:attribution _:366771 ;
rdf:subject ?pfs58 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
_:366819 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs64 ;
rdf:predicate up:annotation ;
rdf:object ?annotation65 .
_:366820 a rdf:Statement ;
up:attribution _:366772 ;
rdf:subject ?pfs64 ;
rdf:predicate up:annotation ;
rdf:object ?annotation65 .
_:366821 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:366822 a rdf:Statement ;
up:attribution _:366773 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:366823 a rdf:Statement ;
up:source unirule:MF_01043 ;
rdf:subject ?pfs76 ;
rdf:predicate up:annotation ;
rdf:object ?annotation77 .
_:366824 a rdf:Statement ;
up:attribution _:366774 ;
rdf:subject ?pfs76 ;
rdf:predicate up:annotation ;
rdf:object ?annotation77 .
_:366825 a rdf:Statement ;
up:attribution _:366775 ;
rdf:subject ?sam82 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:366826 a rdf:Statement ;
up:attribution _:366776 ;
rdf:subject ?sam82 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:366827 a rdf:Statement ;
up:attribution _:366777 ;
rdf:subject ?sam82 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01043
#Rule MF_01043 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01043 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_01043a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a3')) AS ?annotation3) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch96 faldo:location ?templateMotifSequenceMatchRegionP6078297 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP6078299 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_0104392 .
?templateMotifSequenceMatchRegionP6078297 faldo:begin ?templateMotifSequenceMatchBeginP6078298 .
?templateMotifSequenceMatchBeginP6078298 faldo:position ?templateMotifSequenceMatchBeginPositionP6078293 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP6078299 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch100 faldo:location ?targetMotifMatchRegionMatch101 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043103 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_0104394 .
?targetMotifMatchRegionMatch101 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043102 .
?targetMotifMatchRegionMatchBeginMF_01043102 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_0104395 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043103 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon91 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon91 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_0104392, 1, (STRLEN(?templateMotifCigarP60782MF_0104392) - STRLEN(REPLACE(?templateMotifCigarP60782MF_0104392, CONCAT('^(?:-*[^-]){', STR(((1 - ?templateMotifSequenceMatchBeginPositionP6078293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1104) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1104), '}'), '')))), '[^-]', ''))) AS ?step2105) .
BIND(((?step2105 + ?targetMotifMatchRegionMatchBeginPositionMF_0104395) - 1) AS ?thisPositionOn20) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_0104392, 1, (STRLEN(?templateMotifCigarP60782MF_0104392) - STRLEN(REPLACE(?templateMotifCigarP60782MF_0104392, CONCAT('^(?:-*[^-]){', STR(((3 - ?templateMotifSequenceMatchBeginPositionP6078293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1106) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_0104394, 1, (STRLEN(?targetMotifMatchCigarP60782MF_0104394) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_0104394, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1106), '}'), '')))), '[^-]', ''))) AS ?step2107) .
BIND(((?step2107 + ?targetMotifMatchRegionMatchBeginPositionMF_0104395) - 1) AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t108) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) .
FILTER ((BOUND(?thisPositionOn20) && BOUND(?thisPositionOn21))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a17')) AS ?annotation17) .
BIND(?this AS ?pfs16) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch114 faldo:location ?templateMotifSequenceMatchRegionP60782115 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782117 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043110 .
?templateMotifSequenceMatchRegionP60782115 faldo:begin ?templateMotifSequenceMatchBeginP60782116 .
?templateMotifSequenceMatchBeginP60782116 faldo:position ?templateMotifSequenceMatchBeginPositionP60782111 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782117 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch118 faldo:location ?targetMotifMatchRegionMatch119 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043121 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043112 .
?targetMotifMatchRegionMatch119 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043120 .
?targetMotifMatchRegionMatchBeginMF_01043120 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043113 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043121 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon109 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon109 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043110, 1, (STRLEN(?templateMotifCigarP60782MF_01043110) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043110, CONCAT('^(?:-*[^-]){', STR(((4 - ?templateMotifSequenceMatchBeginPositionP60782111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1122) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1122), '}'), '')))), '[^-]', ''))) AS ?step2123) .
BIND(((?step2123 + ?targetMotifMatchRegionMatchBeginPositionMF_01043113) - 1) AS ?thisPositionOn26) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043110, 1, (STRLEN(?templateMotifCigarP60782MF_01043110) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043110, CONCAT('^(?:-*[^-]){', STR(((24 - ?templateMotifSequenceMatchBeginPositionP60782111) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1124) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043112, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043112) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043112, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1124), '}'), '')))), '[^-]', ''))) AS ?step2125) .
BIND(((?step2125 + ?targetMotifMatchRegionMatchBeginPositionMF_01043113) - 1) AS ?thisPositionOn27) .
BIND(?this AS ?pfs1t126) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb24) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse25) .
FILTER ((BOUND(?thisPositionOn26) && BOUND(?thisPositionOn27))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a23')) AS ?annotation23) .
BIND(?this AS ?pfs22) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch132 faldo:location ?templateMotifSequenceMatchRegionP60782133 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782135 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043128 .
?templateMotifSequenceMatchRegionP60782133 faldo:begin ?templateMotifSequenceMatchBeginP60782134 .
?templateMotifSequenceMatchBeginP60782134 faldo:position ?templateMotifSequenceMatchBeginPositionP60782129 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782135 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch136 faldo:location ?targetMotifMatchRegionMatch137 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043139 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043130 .
?targetMotifMatchRegionMatch137 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043138 .
?targetMotifMatchRegionMatchBeginMF_01043138 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043131 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043139 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon127 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon127 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043128, 1, (STRLEN(?templateMotifCigarP60782MF_01043128) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043128, CONCAT('^(?:-*[^-]){', STR(((25 - ?templateMotifSequenceMatchBeginPositionP60782129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1140) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1140), '}'), '')))), '[^-]', ''))) AS ?step2141) .
BIND(((?step2141 + ?targetMotifMatchRegionMatchBeginPositionMF_01043131) - 1) AS ?thisPositionOn32) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043128, 1, (STRLEN(?templateMotifCigarP60782MF_01043128) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043128, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionP60782129) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1142) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043130, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043130) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043130, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1142), '}'), '')))), '[^-]', ''))) AS ?step2143) .
BIND(((?step2143 + ?targetMotifMatchRegionMatchBeginPositionMF_01043131) - 1) AS ?thisPositionOn33) .
BIND(?this AS ?pfs1t144) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse31) .
FILTER ((BOUND(?thisPositionOn32) && BOUND(?thisPositionOn33))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a29')) AS ?annotation29) .
BIND(?this AS ?pfs28) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch150 faldo:location ?templateMotifSequenceMatchRegionP60782151 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782153 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043146 .
?templateMotifSequenceMatchRegionP60782151 faldo:begin ?templateMotifSequenceMatchBeginP60782152 .
?templateMotifSequenceMatchBeginP60782152 faldo:position ?templateMotifSequenceMatchBeginPositionP60782147 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782153 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch154 faldo:location ?targetMotifMatchRegionMatch155 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043157 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043148 .
?targetMotifMatchRegionMatch155 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043156 .
?targetMotifMatchRegionMatchBeginMF_01043156 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043149 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043157 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon145 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon145 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043146, 1, (STRLEN(?templateMotifCigarP60782MF_01043146) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043146, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionP60782147) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1158) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1158), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1158), '}'), '')))), '[^-]', ''))) AS ?step2159) .
BIND(((?step2159 + ?targetMotifMatchRegionMatchBeginPositionMF_01043149) - 1) AS ?thisPositionOn38) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043146, 1, (STRLEN(?templateMotifCigarP60782MF_01043146) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043146, CONCAT('^(?:-*[^-]){', STR(((73 - ?templateMotifSequenceMatchBeginPositionP60782147) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1160) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043148, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043148) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043148, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), '')))), '[^-]', ''))) AS ?step2161) .
BIND(((?step2161 + ?targetMotifMatchRegionMatchBeginPositionMF_01043149) - 1) AS ?thisPositionOn39) .
BIND(?this AS ?pfs1t162) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse37) .
FILTER ((BOUND(?thisPositionOn38) && BOUND(?thisPositionOn39))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a35')) AS ?annotation35) .
BIND(?this AS ?pfs34) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch168 faldo:location ?templateMotifSequenceMatchRegionP60782169 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782171 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043164 .
?templateMotifSequenceMatchRegionP60782169 faldo:begin ?templateMotifSequenceMatchBeginP60782170 .
?templateMotifSequenceMatchBeginP60782170 faldo:position ?templateMotifSequenceMatchBeginPositionP60782165 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782171 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch172 faldo:location ?targetMotifMatchRegionMatch173 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043175 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043166 .
?targetMotifMatchRegionMatch173 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043174 .
?targetMotifMatchRegionMatchBeginMF_01043174 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043167 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043175 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon163 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon163 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043164, 1, (STRLEN(?templateMotifCigarP60782MF_01043164) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043164, CONCAT('^(?:-*[^-]){', STR(((74 - ?templateMotifSequenceMatchBeginPositionP60782165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1176) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1176), '}'), '')))), '[^-]', ''))) AS ?step2177) .
BIND(((?step2177 + ?targetMotifMatchRegionMatchBeginPositionMF_01043167) - 1) AS ?thisPositionOn44) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043164, 1, (STRLEN(?templateMotifCigarP60782MF_01043164) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043164, CONCAT('^(?:-*[^-]){', STR(((80 - ?templateMotifSequenceMatchBeginPositionP60782165) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1178) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043166, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043166) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043166, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1178), '}'), '')))), '[^-]', ''))) AS ?step2179) .
BIND(((?step2179 + ?targetMotifMatchRegionMatchBeginPositionMF_01043167) - 1) AS ?thisPositionOn45) .
BIND(?this AS ?pfs1t180) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse43) .
FILTER ((BOUND(?thisPositionOn44) && BOUND(?thisPositionOn45))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a41')) AS ?annotation41) .
BIND(?this AS ?pfs40) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch186 faldo:location ?templateMotifSequenceMatchRegionP60782187 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782189 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043182 .
?templateMotifSequenceMatchRegionP60782187 faldo:begin ?templateMotifSequenceMatchBeginP60782188 .
?templateMotifSequenceMatchBeginP60782188 faldo:position ?templateMotifSequenceMatchBeginPositionP60782183 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782189 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch190 faldo:location ?targetMotifMatchRegionMatch191 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043193 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043184 .
?targetMotifMatchRegionMatch191 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043192 .
?targetMotifMatchRegionMatchBeginMF_01043192 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043185 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043193 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon181 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon181 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043182, 1, (STRLEN(?templateMotifCigarP60782MF_01043182) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043182, CONCAT('^(?:-*[^-]){', STR(((81 - ?templateMotifSequenceMatchBeginPositionP60782183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1194) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1194), '}'), '')))), '[^-]', ''))) AS ?step2195) .
BIND(((?step2195 + ?targetMotifMatchRegionMatchBeginPositionMF_01043185) - 1) AS ?thisPositionOn50) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043182, 1, (STRLEN(?templateMotifCigarP60782MF_01043182) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043182, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionP60782183) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1196) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043184, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043184) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043184, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), '')))), '[^-]', ''))) AS ?step2197) .
BIND(((?step2197 + ?targetMotifMatchRegionMatchBeginPositionMF_01043185) - 1) AS ?thisPositionOn51) .
BIND(?this AS ?pfs1t198) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb48) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse49) .
FILTER ((BOUND(?thisPositionOn50) && BOUND(?thisPositionOn51))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a47')) AS ?annotation47) .
BIND(?this AS ?pfs46) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch204 faldo:location ?templateMotifSequenceMatchRegionP60782205 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782207 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043200 .
?templateMotifSequenceMatchRegionP60782205 faldo:begin ?templateMotifSequenceMatchBeginP60782206 .
?templateMotifSequenceMatchBeginP60782206 faldo:position ?templateMotifSequenceMatchBeginPositionP60782201 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782207 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch208 faldo:location ?targetMotifMatchRegionMatch209 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043211 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043202 .
?targetMotifMatchRegionMatch209 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043210 .
?targetMotifMatchRegionMatchBeginMF_01043210 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043203 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043211 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon199 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon199 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043200, 1, (STRLEN(?templateMotifCigarP60782MF_01043200) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043200, CONCAT('^(?:-*[^-]){', STR(((102 - ?templateMotifSequenceMatchBeginPositionP60782201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1212) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1212), '}'), '')))), '[^-]', ''))) AS ?step2213) .
BIND(((?step2213 + ?targetMotifMatchRegionMatchBeginPositionMF_01043203) - 1) AS ?thisPositionOn56) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043200, 1, (STRLEN(?templateMotifCigarP60782MF_01043200) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043200, CONCAT('^(?:-*[^-]){', STR(((111 - ?templateMotifSequenceMatchBeginPositionP60782201) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1214) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043202, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043202) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043202, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1214), '}'), '')))), '[^-]', ''))) AS ?step2215) .
BIND(((?step2215 + ?targetMotifMatchRegionMatchBeginPositionMF_01043203) - 1) AS ?thisPositionOn57) .
BIND(?this AS ?pfs1t216) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse55) .
FILTER ((BOUND(?thisPositionOn56) && BOUND(?thisPositionOn57))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a53')) AS ?annotation53) .
BIND(?this AS ?pfs52) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch222 faldo:location ?templateMotifSequenceMatchRegionP60782223 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782225 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043218 .
?templateMotifSequenceMatchRegionP60782223 faldo:begin ?templateMotifSequenceMatchBeginP60782224 .
?templateMotifSequenceMatchBeginP60782224 faldo:position ?templateMotifSequenceMatchBeginPositionP60782219 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782225 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch226 faldo:location ?targetMotifMatchRegionMatch227 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043229 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043220 .
?targetMotifMatchRegionMatch227 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043228 .
?targetMotifMatchRegionMatchBeginMF_01043228 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043221 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043229 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon217 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon217 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043218, 1, (STRLEN(?templateMotifCigarP60782MF_01043218) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043218, CONCAT('^(?:-*[^-]){', STR(((112 - ?templateMotifSequenceMatchBeginPositionP60782219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) .
BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_01043221) - 1) AS ?thisPositionOn62) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043218, 1, (STRLEN(?templateMotifCigarP60782MF_01043218) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043218, CONCAT('^(?:-*[^-]){', STR(((132 - ?templateMotifSequenceMatchBeginPositionP60782219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043220, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043220) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) .
BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_01043221) - 1) AS ?thisPositionOn63) .
BIND(?this AS ?pfs1t234) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb60) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse61) .
FILTER ((BOUND(?thisPositionOn62) && BOUND(?thisPositionOn63))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a59')) AS ?annotation59) .
BIND(?this AS ?pfs58) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch240 faldo:location ?templateMotifSequenceMatchRegionP60782241 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782243 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043236 .
?templateMotifSequenceMatchRegionP60782241 faldo:begin ?templateMotifSequenceMatchBeginP60782242 .
?templateMotifSequenceMatchBeginP60782242 faldo:position ?templateMotifSequenceMatchBeginPositionP60782237 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782243 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch244 faldo:location ?targetMotifMatchRegionMatch245 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043247 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043238 .
?targetMotifMatchRegionMatch245 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043246 .
?targetMotifMatchRegionMatchBeginMF_01043246 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043239 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043247 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon235 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon235 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043236, 1, (STRLEN(?templateMotifCigarP60782MF_01043236) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043236, CONCAT('^(?:-*[^-]){', STR(((133 - ?templateMotifSequenceMatchBeginPositionP60782237) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1248) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1248), '}'), '')))), '[^-]', ''))) AS ?step2249) .
BIND(((?step2249 + ?targetMotifMatchRegionMatchBeginPositionMF_01043239) - 1) AS ?thisPositionOn68) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043236, 1, (STRLEN(?templateMotifCigarP60782MF_01043236) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043236, CONCAT('^(?:-*[^-]){', STR(((137 - ?templateMotifSequenceMatchBeginPositionP60782237) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1250) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043238, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043238) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043238, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), '')))), '[^-]', ''))) AS ?step2251) .
BIND(((?step2251 + ?targetMotifMatchRegionMatchBeginPositionMF_01043239) - 1) AS ?thisPositionOn69) .
BIND(?this AS ?pfs1t252) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb66) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse67) .
FILTER ((BOUND(?thisPositionOn68) && BOUND(?thisPositionOn69))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a65')) AS ?annotation65) .
BIND(?this AS ?pfs64) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch258 faldo:location ?templateMotifSequenceMatchRegionP60782259 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782261 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043254 .
?templateMotifSequenceMatchRegionP60782259 faldo:begin ?templateMotifSequenceMatchBeginP60782260 .
?templateMotifSequenceMatchBeginP60782260 faldo:position ?templateMotifSequenceMatchBeginPositionP60782255 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782261 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch262 faldo:location ?targetMotifMatchRegionMatch263 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043265 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043256 .
?targetMotifMatchRegionMatch263 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043264 .
?targetMotifMatchRegionMatchBeginMF_01043264 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043257 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043265 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon253 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon253 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043254, 1, (STRLEN(?templateMotifCigarP60782MF_01043254) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043254, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionP60782255) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1266) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), '')))), '[^-]', ''))) AS ?step2267) .
BIND(((?step2267 + ?targetMotifMatchRegionMatchBeginPositionMF_01043257) - 1) AS ?thisPositionOn74) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043254, 1, (STRLEN(?templateMotifCigarP60782MF_01043254) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043254, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionP60782255) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1268) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043256, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043256) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043256, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1268), '}'), '')))), '[^-]', ''))) AS ?step2269) .
BIND(((?step2269 + ?targetMotifMatchRegionMatchBeginPositionMF_01043257) - 1) AS ?thisPositionOn75) .
BIND(?this AS ?pfs1t270) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb72) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse73) .
FILTER ((BOUND(?thisPositionOn74) && BOUND(?thisPositionOn75))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a71')) AS ?annotation71) .
BIND(?this AS ?pfs70) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch276 faldo:location ?templateMotifSequenceMatchRegionP60782277 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP60782279 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP60782MF_01043272 .
?templateMotifSequenceMatchRegionP60782277 faldo:begin ?templateMotifSequenceMatchBeginP60782278 .
?templateMotifSequenceMatchBeginP60782278 faldo:position ?templateMotifSequenceMatchBeginPositionP60782273 ;
faldo:reference isoform:P60782-1 .
?templateMotifSequenceProfileAlignmentOperationP60782279 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
?targetMotifMatch280 faldo:location ?targetMotifMatchRegionMatch281 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01043283 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP60782MF_01043274 .
?targetMotifMatchRegionMatch281 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01043282 .
?targetMotifMatchRegionMatchBeginMF_01043282 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01043275 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01043283 edam:has_input signature:MF_01043 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon271 {taxon:590 taxon:620 taxon:561}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon271 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043272, 1, (STRLEN(?templateMotifCigarP60782MF_01043272) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043272, CONCAT('^(?:-*[^-]){', STR(((159 - ?templateMotifSequenceMatchBeginPositionP60782273) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1284) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1284), '}'), '')))), '[^-]', ''))) AS ?step2285) .
BIND(((?step2285 + ?targetMotifMatchRegionMatchBeginPositionMF_01043275) - 1) AS ?thisPositionOn80) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP60782MF_01043272, 1, (STRLEN(?templateMotifCigarP60782MF_01043272) - STRLEN(REPLACE(?templateMotifCigarP60782MF_01043272, CONCAT('^(?:-*[^-]){', STR(((205 - ?templateMotifSequenceMatchBeginPositionP60782273) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1286) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP60782MF_01043274, 1, (STRLEN(?targetMotifMatchCigarP60782MF_01043274) - STRLEN(REPLACE(?targetMotifMatchCigarP60782MF_01043274, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1286), '}'), '')))), '[^-]', ''))) AS ?step2287) .
BIND(((?step2287 + ?targetMotifMatchRegionMatchBeginPositionMF_01043275) - 1) AS ?thisPositionOn81) .
BIND(?this AS ?pfs1t288) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb78) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse79) .
FILTER ((BOUND(?thisPositionOn80) && BOUND(?thisPositionOn81))) .
BIND(URI(CONCAT(STR(?this), '#MF_01043a77')) AS ?annotation77) .
BIND(?this AS ?pfs76) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome |
| http://purl.uniprot.org/unirules/MF_01043 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_01043#construct |