| http://purl.uniprot.org/unirules/MF_03174#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:860820 up:source unirule:MF_03174 .
_:860821 up:source unirule:MF_03174 .
_:860822 up:source unirule:MF_03174 .
_:860823 up:source unirule:MF_03174 .
_:860824 up:source unirule:MF_03174 .
_:860825 up:source unirule:MF_03174 .
_:860826 up:source unirule:MF_03174 .
_:860827 up:source unirule:MF_03174 .
_:860828 up:source unirule:MF_03174 .
_:860829 up:source unirule:MF_03174 .
_:860830 up:source unirule:MF_03174 .
_:860831 up:source unirule:MF_03174 .
_:860832 up:source unirule:MF_03174 .
_:860833 up:source unirule:MF_03174 .
_:860834 up:source unirule:MF_03174 .
_:860835 up:source unirule:MF_03174 .
_:860836 up:source unirule:MF_03174 .
_:860837 up:source unirule:MF_03174 .
_:860838 up:source unirule:MF_03174 .
_:860839 up:source unirule:MF_03174 .
_:860840 up:source unirule:MF_03174 .
_:860841 up:source unirule:MF_03174 .
_:860842 up:source unirule:MF_03174 .
_:860843 up:source unirule:MF_03174 .
_:860844 up:source unirule:MF_03174 .
_:860845 up:source unirule:MF_03174 .
_:860846 up:source unirule:MF_03174 .
_:860847 up:source unirule:MF_03174 .
_:860848 up:source unirule:MF_03174 .
?this up:annotation ?annotation0 ,
?annotation2 ;
up:classifiedWith GO:0004239 ,
GO:0046872 ,
GO:0070006 ,
keyword:31 ,
keyword:378 ,
keyword:479 ,
keyword:645 .
?annotation0 up:activity ?activity1 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity1 up:enzymeClass .
?annotation2 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.' .
?case3 up:classifiedWith GO:0005737 ,
keyword:963 .
?pfs5 up:annotation ?annotation6 .
?annotation6 faldo:begin ?pfsb7 ;
faldo:end ?pfse8 ;
up:ligand ?ligand9 ;
rdf:type up:Binding_Site_Annotation .
?pfsb7 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfse8 faldo:position ?thisPositionOn12 ;
rdf:type faldo:ExactPosition .
?ligand9 rdfs:subClassOf ?molecule10 .
?molecule10 rdfs:label 'substrate' .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
up:ligand ?ligand17 ;
rdf:type up:Binding_Site_Annotation .
?pfsb15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?ligand17 rdfs:subClassOf chebi:60240 .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf chebi:60240 .
?pfs27 up:annotation ?annotation28 .
?annotation28 faldo:begin ?pfsb29 ;
faldo:end ?pfse30 ;
up:ligand ?ligand31 ;
rdf:type up:Binding_Site_Annotation .
?pfsb29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse30 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?ligand31 rdfs:subClassOf chebi:60240 .
?pfs34 up:annotation ?annotation35 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
up:ligand ?ligand38 ;
rdf:type up:Binding_Site_Annotation .
?pfsb36 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?ligand38 rdfs:subClassOf chebi:60240 .
?pfs41 up:annotation ?annotation42 .
?annotation42 faldo:begin ?pfsb43 ;
faldo:end ?pfse44 ;
up:ligand ?ligand45 ;
rdf:type up:Binding_Site_Annotation .
?pfsb43 faldo:position ?thisPositionOn47 ;
rdf:type faldo:ExactPosition .
?pfse44 faldo:position ?thisPositionOn48 ;
rdf:type faldo:ExactPosition .
?ligand45 rdfs:subClassOf ?molecule46 .
?molecule46 rdfs:label 'substrate' .
?pfs49 up:annotation ?annotation50 .
?annotation50 faldo:begin ?pfsb51 ;
faldo:end ?pfse52 ;
up:ligand ?ligand53 ;
rdf:type up:Binding_Site_Annotation .
?pfsb51 faldo:position ?thisPositionOn54 ;
rdf:type faldo:ExactPosition .
?pfse52 faldo:position ?thisPositionOn55 ;
rdf:type faldo:ExactPosition .
?ligand53 rdfs:subClassOf chebi:60240 .
?pfs56 up:annotation ?annotation57 .
?annotation57 faldo:begin ?pfsb58 ;
faldo:end ?pfse59 ;
up:ligand ?ligand60 ;
rdf:type up:Binding_Site_Annotation .
?pfsb58 faldo:position ?thisPositionOn61 ;
rdf:type faldo:ExactPosition .
?pfse59 faldo:position ?thisPositionOn62 ;
rdf:type faldo:ExactPosition .
?ligand60 rdfs:subClassOf chebi:60240 .
?pfs63 up:annotation ?annotation64 .
?annotation64 faldo:begin ?pfsb65 ;
faldo:end ?pfse66 ;
up:ligand ?ligand67 ;
rdf:type up:Binding_Site_Annotation .
?pfsb65 faldo:position ?thisPositionOn68 ;
rdf:type faldo:ExactPosition .
?pfse66 faldo:position ?thisPositionOn69 ;
rdf:type faldo:ExactPosition .
?ligand67 rdfs:subClassOf chebi:60240 .
?pfs70 up:annotation ?annotation71 .
?annotation71 faldo:begin ?pfsb72 ;
faldo:end ?pfse73 ;
up:ligand ?ligand74 ;
rdf:type up:Binding_Site_Annotation .
?pfsb72 faldo:position ?thisPositionOn75 ;
rdf:type faldo:ExactPosition .
?pfse73 faldo:position ?thisPositionOn76 ;
rdf:type faldo:ExactPosition .
?ligand74 up:ligandPart ?ligand74 ;
rdfs:subClassOf chebi:16541 ,
chebi:64731 .
?pfs77 up:annotation ?annotation78 .
?annotation78 faldo:begin ?pfsb79 ;
faldo:end ?pfse80 ;
up:ligand ?ligand81 ;
rdf:type up:Binding_Site_Annotation .
?pfsb79 faldo:position ?thisPositionOn82 ;
rdf:type faldo:ExactPosition .
?pfse80 faldo:position ?thisPositionOn83 ;
rdf:type faldo:ExactPosition .
?ligand81 rdfs:subClassOf chebi:29105 .
?pfs84 up:annotation ?annotation85 .
?annotation85 faldo:begin ?pfsb86 ;
faldo:end ?pfse87 ;
up:ligand ?ligand88 ;
rdf:type up:Binding_Site_Annotation .
?pfsb86 faldo:position ?thisPositionOn89 ;
rdf:type faldo:ExactPosition .
?pfse87 faldo:position ?thisPositionOn90 ;
rdf:type faldo:ExactPosition .
?ligand88 rdfs:subClassOf chebi:29105 .
?pfs91 up:annotation ?annotation92 .
?annotation92 faldo:begin ?pfsb93 ;
faldo:end ?pfse94 ;
up:ligand ?ligand95 ;
rdf:type up:Binding_Site_Annotation .
?pfsb93 faldo:position ?thisPositionOn96 ;
rdf:type faldo:ExactPosition .
?pfse94 faldo:position ?thisPositionOn97 ;
rdf:type faldo:ExactPosition .
?ligand95 rdfs:subClassOf chebi:29105 .
?pfs98 up:annotation ?annotation99 .
?annotation99 faldo:begin ?pfsb100 ;
faldo:end ?pfse101 ;
up:ligand ?ligand102 ;
rdf:type up:Binding_Site_Annotation .
?pfsb100 faldo:position ?thisPositionOn103 ;
rdf:type faldo:ExactPosition .
?pfse101 faldo:position ?thisPositionOn104 ;
rdf:type faldo:ExactPosition .
?ligand102 rdfs:subClassOf chebi:29105 .
?pfs105 up:annotation ?annotation106 .
?annotation106 faldo:begin ?pfsb107 ;
faldo:end ?pfse108 ;
up:ligand ?ligand109 ;
rdf:type up:Binding_Site_Annotation .
?pfsb107 faldo:position ?thisPositionOn110 ;
rdf:type faldo:ExactPosition .
?pfse108 faldo:position ?thisPositionOn111 ;
rdf:type faldo:ExactPosition .
?ligand109 up:ligandPart ?ligand109 ;
rdfs:subClassOf chebi:16541 ,
chebi:64731 .
?pfs112 up:annotation ?annotation113 .
?annotation113 faldo:begin ?pfsb114 ;
faldo:end ?pfse115 ;
up:ligand ?ligand116 ;
rdf:type up:Binding_Site_Annotation .
?pfsb114 faldo:position ?thisPositionOn117 ;
rdf:type faldo:ExactPosition .
?pfse115 faldo:position ?thisPositionOn118 ;
rdf:type faldo:ExactPosition .
?ligand116 rdfs:subClassOf chebi:29105 .
?pfs119 up:annotation ?annotation120 .
?annotation120 faldo:begin ?pfsb121 ;
faldo:end ?pfse122 ;
up:ligand ?ligand123 ;
rdf:type up:Binding_Site_Annotation .
?pfsb121 faldo:position ?thisPositionOn124 ;
rdf:type faldo:ExactPosition .
?pfse122 faldo:position ?thisPositionOn125 ;
rdf:type faldo:ExactPosition .
?ligand123 rdfs:subClassOf chebi:29105 .
?pfs126 up:annotation ?annotation127 .
?annotation127 faldo:begin ?pfsb128 ;
faldo:end ?pfse129 ;
up:ligand ?ligand130 ;
rdf:type up:Binding_Site_Annotation .
?pfsb128 faldo:position ?thisPositionOn131 ;
rdf:type faldo:ExactPosition .
?pfse129 faldo:position ?thisPositionOn132 ;
rdf:type faldo:ExactPosition .
?ligand130 rdfs:subClassOf chebi:29105 .
_:860849 a rdf:Statement ;
up:attribution _:860820 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation0 .
_:860850 a rdf:Statement ;
up:attribution _:860821 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:860851 a rdf:Statement ;
up:attribution _:860822 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:31 .
_:860852 a rdf:Statement ;
up:attribution _:860823 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:378 .
_:860853 a rdf:Statement ;
up:attribution _:860824 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:645 .
_:860854 a rdf:Statement ;
up:attribution _:860825 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:860855 a rdf:Statement ;
up:attribution _:860826 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0046872 .
_:860856 a rdf:Statement ;
up:attribution _:860827 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0070006 .
_:860857 a rdf:Statement ;
up:attribution _:860828 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004239 .
_:860858 a rdf:Statement ;
up:attribution _:860829 ;
rdf:subject ?case3 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:860859 a rdf:Statement ;
up:attribution _:860830 ;
rdf:subject ?case3 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:860860 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs5 ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:860861 a rdf:Statement ;
up:attribution _:860831 ;
rdf:subject ?pfs5 ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:860862 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:860863 a rdf:Statement ;
up:attribution _:860832 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:860864 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:860865 a rdf:Statement ;
up:attribution _:860833 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:860866 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:860867 a rdf:Statement ;
up:attribution _:860834 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:860868 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:860869 a rdf:Statement ;
up:attribution _:860835 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:860870 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs41 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:860871 a rdf:Statement ;
up:attribution _:860836 ;
rdf:subject ?pfs41 ;
rdf:predicate up:annotation ;
rdf:object ?annotation42 .
_:860872 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs49 ;
rdf:predicate up:annotation ;
rdf:object ?annotation50 .
_:860873 a rdf:Statement ;
up:attribution _:860837 ;
rdf:subject ?pfs49 ;
rdf:predicate up:annotation ;
rdf:object ?annotation50 .
_:860874 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs56 ;
rdf:predicate up:annotation ;
rdf:object ?annotation57 .
_:860875 a rdf:Statement ;
up:attribution _:860838 ;
rdf:subject ?pfs56 ;
rdf:predicate up:annotation ;
rdf:object ?annotation57 .
_:860876 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs63 ;
rdf:predicate up:annotation ;
rdf:object ?annotation64 .
_:860877 a rdf:Statement ;
up:attribution _:860839 ;
rdf:subject ?pfs63 ;
rdf:predicate up:annotation ;
rdf:object ?annotation64 .
_:860878 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:860879 a rdf:Statement ;
up:attribution _:860840 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:860880 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs77 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
_:860881 a rdf:Statement ;
up:attribution _:860841 ;
rdf:subject ?pfs77 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
_:860882 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs84 ;
rdf:predicate up:annotation ;
rdf:object ?annotation85 .
_:860883 a rdf:Statement ;
up:attribution _:860842 ;
rdf:subject ?pfs84 ;
rdf:predicate up:annotation ;
rdf:object ?annotation85 .
_:860884 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs91 ;
rdf:predicate up:annotation ;
rdf:object ?annotation92 .
_:860885 a rdf:Statement ;
up:attribution _:860843 ;
rdf:subject ?pfs91 ;
rdf:predicate up:annotation ;
rdf:object ?annotation92 .
_:860886 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs98 ;
rdf:predicate up:annotation ;
rdf:object ?annotation99 .
_:860887 a rdf:Statement ;
up:attribution _:860844 ;
rdf:subject ?pfs98 ;
rdf:predicate up:annotation ;
rdf:object ?annotation99 .
_:860888 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs105 ;
rdf:predicate up:annotation ;
rdf:object ?annotation106 .
_:860889 a rdf:Statement ;
up:attribution _:860845 ;
rdf:subject ?pfs105 ;
rdf:predicate up:annotation ;
rdf:object ?annotation106 .
_:860890 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs112 ;
rdf:predicate up:annotation ;
rdf:object ?annotation113 .
_:860891 a rdf:Statement ;
up:attribution _:860846 ;
rdf:subject ?pfs112 ;
rdf:predicate up:annotation ;
rdf:object ?annotation113 .
_:860892 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs119 ;
rdf:predicate up:annotation ;
rdf:object ?annotation120 .
_:860893 a rdf:Statement ;
up:attribution _:860847 ;
rdf:subject ?pfs119 ;
rdf:predicate up:annotation ;
rdf:object ?annotation120 .
_:860894 a rdf:Statement ;
up:source unirule:MF_03174 ;
rdf:subject ?pfs126 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:860895 a rdf:Statement ;
up:attribution _:860848 ;
rdf:subject ?pfs126 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03174
#Rule MF_03174 Created by:? on:2013-05-31 Modified by:ipedruzz on:2025-02-06
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01974 .
?thisOrganism rdfs:subClassOf+ taxon:2759 .
BIND(URI(CONCAT(STR(?this), '#MF_03174a0')) AS ?annotation0) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a2')) AS ?annotation2) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch137 faldo:location ?templateMotifSequenceMatchRegionQ6UB28138 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28140 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974133 .
?templateMotifSequenceMatchRegionQ6UB28138 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28139 .
?templateMotifSequenceMatchBeginQ6UB28139 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28134 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28140 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch141 faldo:location ?targetMotifMatchRegionMatch142 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974144 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974135 .
?targetMotifMatchRegionMatch142 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974143 .
?targetMotifMatchRegionMatchBeginMF_01974143 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974136 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974144 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974133, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974133) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974133, CONCAT('^(?:-*[^-]){', STR(((161 - ?templateMotifSequenceMatchBeginPositionQ6UB28134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1145) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974135, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974135) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974135, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974135) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), '')))), '[^-]', ''))) AS ?step2146) .
BIND(((?step2146 + ?targetMotifMatchRegionMatchBeginPositionMF_01974136) - 1) AS ?thisPositionOn11) .
BIND(?thisPositionOn11 AS ?thisPositionOn12) .
BIND(?this AS ?pfs1t147) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfsb7) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn12))) AS ?pfse8) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn11, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a6')) AS ?annotation6) .
BIND(?this AS ?pfs5) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch152 faldo:location ?templateMotifSequenceMatchRegionQ6UB28153 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28155 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974148 .
?templateMotifSequenceMatchRegionQ6UB28153 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28154 .
?templateMotifSequenceMatchBeginQ6UB28154 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28149 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28155 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch156 faldo:location ?targetMotifMatchRegionMatch157 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974159 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974150 .
?targetMotifMatchRegionMatch157 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974158 .
?targetMotifMatchRegionMatchBeginMF_01974158 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974151 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974159 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974148, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974148) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974148, CONCAT('^(?:-*[^-]){', STR(((178 - ?templateMotifSequenceMatchBeginPositionQ6UB28149) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1160) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974150, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974150) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974150, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974150) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974150, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1160), '}'), '')))), '[^-]', ''))) AS ?step2161) .
BIND(((?step2161 + ?targetMotifMatchRegionMatchBeginPositionMF_01974151) - 1) AS ?thisPositionOn18) .
BIND(?thisPositionOn18 AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t162) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn18, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch167 faldo:location ?templateMotifSequenceMatchRegionQ6UB28168 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28170 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974163 .
?templateMotifSequenceMatchRegionQ6UB28168 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28169 .
?templateMotifSequenceMatchBeginQ6UB28169 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28164 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28170 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch171 faldo:location ?targetMotifMatchRegionMatch172 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974174 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974165 .
?targetMotifMatchRegionMatch172 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974173 .
?targetMotifMatchRegionMatchBeginMF_01974173 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974166 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974174 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974163, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974163) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974163, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionQ6UB28164) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1175) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974165, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974165) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1175), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974165, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974165) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974165, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1175), '}'), '')))), '[^-]', ''))) AS ?step2176) .
BIND(((?step2176 + ?targetMotifMatchRegionMatchBeginPositionMF_01974166) - 1) AS ?thisPositionOn25) .
BIND(?thisPositionOn25 AS ?thisPositionOn26) .
BIND(?this AS ?pfs1t177) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch182 faldo:location ?templateMotifSequenceMatchRegionQ6UB28183 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28185 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974178 .
?templateMotifSequenceMatchRegionQ6UB28183 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28184 .
?templateMotifSequenceMatchBeginQ6UB28184 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28179 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28185 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch186 faldo:location ?targetMotifMatchRegionMatch187 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974189 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974180 .
?targetMotifMatchRegionMatch187 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974188 .
?targetMotifMatchRegionMatchBeginMF_01974188 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974181 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974189 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974178, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974178) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974178, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionQ6UB28179) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1190) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974180, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974180) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974180, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1190), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974180, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974180) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974180, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1190), '}'), '')))), '[^-]', ''))) AS ?step2191) .
BIND(((?step2191 + ?targetMotifMatchRegionMatchBeginPositionMF_01974181) - 1) AS ?thisPositionOn32) .
BIND(?thisPositionOn32 AS ?thisPositionOn33) .
BIND(?this AS ?pfs1t192) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a28')) AS ?annotation28) .
BIND(?this AS ?pfs27) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch197 faldo:location ?templateMotifSequenceMatchRegionQ6UB28198 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28200 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974193 .
?templateMotifSequenceMatchRegionQ6UB28198 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28199 .
?templateMotifSequenceMatchBeginQ6UB28199 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28194 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28200 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch201 faldo:location ?targetMotifMatchRegionMatch202 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974204 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974195 .
?targetMotifMatchRegionMatch202 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974203 .
?targetMotifMatchRegionMatchBeginMF_01974203 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974196 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974204 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974193, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974193) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974193, CONCAT('^(?:-*[^-]){', STR(((252 - ?templateMotifSequenceMatchBeginPositionQ6UB28194) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1205) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974195, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974195) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974195, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1205), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974195, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974195) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974195, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1205), '}'), '')))), '[^-]', ''))) AS ?step2206) .
BIND(((?step2206 + ?targetMotifMatchRegionMatchBeginPositionMF_01974196) - 1) AS ?thisPositionOn39) .
BIND(?thisPositionOn39 AS ?thisPositionOn40) .
BIND(?this AS ?pfs1t207) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a35')) AS ?annotation35) .
BIND(?this AS ?pfs34) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch212 faldo:location ?templateMotifSequenceMatchRegionQ6UB28213 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28215 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974208 .
?templateMotifSequenceMatchRegionQ6UB28213 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28214 .
?templateMotifSequenceMatchBeginQ6UB28214 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28209 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28215 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch216 faldo:location ?targetMotifMatchRegionMatch217 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974219 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974210 .
?targetMotifMatchRegionMatch217 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974218 .
?targetMotifMatchRegionMatchBeginMF_01974218 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974211 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974219 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974208, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974208) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974208, CONCAT('^(?:-*[^-]){', STR(((259 - ?templateMotifSequenceMatchBeginPositionQ6UB28209) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1220) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974210, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974210) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974210, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1220), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974210, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974210) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974210, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1220), '}'), '')))), '[^-]', ''))) AS ?step2221) .
BIND(((?step2221 + ?targetMotifMatchRegionMatchBeginPositionMF_01974211) - 1) AS ?thisPositionOn47) .
BIND(?thisPositionOn47 AS ?thisPositionOn48) .
BIND(?this AS ?pfs1t222) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb43) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse44) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a42')) AS ?annotation42) .
BIND(?this AS ?pfs41) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch227 faldo:location ?templateMotifSequenceMatchRegionQ6UB28228 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28230 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974223 .
?templateMotifSequenceMatchRegionQ6UB28228 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28229 .
?templateMotifSequenceMatchBeginQ6UB28229 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28224 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28230 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch231 faldo:location ?targetMotifMatchRegionMatch232 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974234 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974225 .
?targetMotifMatchRegionMatch232 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974233 .
?targetMotifMatchRegionMatchBeginMF_01974233 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974226 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974234 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974223, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974223) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974223, CONCAT('^(?:-*[^-]){', STR(((284 - ?templateMotifSequenceMatchBeginPositionQ6UB28224) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1235) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974225, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974225) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1235), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974225, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974225) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974225, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1235), '}'), '')))), '[^-]', ''))) AS ?step2236) .
BIND(((?step2236 + ?targetMotifMatchRegionMatchBeginPositionMF_01974226) - 1) AS ?thisPositionOn54) .
BIND(?thisPositionOn54 AS ?thisPositionOn55) .
BIND(?this AS ?pfs1t237) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a50')) AS ?annotation50) .
BIND(?this AS ?pfs49) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch242 faldo:location ?templateMotifSequenceMatchRegionQ6UB28243 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28245 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974238 .
?templateMotifSequenceMatchRegionQ6UB28243 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28244 .
?templateMotifSequenceMatchBeginQ6UB28244 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28239 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28245 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch246 faldo:location ?targetMotifMatchRegionMatch247 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974249 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974240 .
?targetMotifMatchRegionMatch247 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974248 .
?targetMotifMatchRegionMatchBeginMF_01974248 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974241 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974249 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974238, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974238) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974238, CONCAT('^(?:-*[^-]){', STR(((315 - ?templateMotifSequenceMatchBeginPositionQ6UB28239) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1250) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974240, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974240) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974240, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974240) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974240, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1250), '}'), '')))), '[^-]', ''))) AS ?step2251) .
BIND(((?step2251 + ?targetMotifMatchRegionMatchBeginPositionMF_01974241) - 1) AS ?thisPositionOn61) .
BIND(?thisPositionOn61 AS ?thisPositionOn62) .
BIND(?this AS ?pfs1t252) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a57')) AS ?annotation57) .
BIND(?this AS ?pfs56) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch257 faldo:location ?templateMotifSequenceMatchRegionQ6UB28258 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ6UB28260 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ6UB28MF_01974253 .
?templateMotifSequenceMatchRegionQ6UB28258 faldo:begin ?templateMotifSequenceMatchBeginQ6UB28259 .
?templateMotifSequenceMatchBeginQ6UB28259 faldo:position ?templateMotifSequenceMatchBeginPositionQ6UB28254 ;
faldo:reference isoform:Q6UB28-1 .
?templateMotifSequenceProfileAlignmentOperationQ6UB28260 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch261 faldo:location ?targetMotifMatchRegionMatch262 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974264 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ6UB28MF_01974255 .
?targetMotifMatchRegionMatch262 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974263 .
?targetMotifMatchRegionMatchBeginMF_01974263 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974256 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974264 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ6UB28MF_01974253, 1, (STRLEN(?templateMotifCigarQ6UB28MF_01974253) - STRLEN(REPLACE(?templateMotifCigarQ6UB28MF_01974253, CONCAT('^(?:-*[^-]){', STR(((315 - ?templateMotifSequenceMatchBeginPositionQ6UB28254) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1265) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974255, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974255) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974255, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1265), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ6UB28MF_01974255, 1, (STRLEN(?targetMotifMatchCigarQ6UB28MF_01974255) - STRLEN(REPLACE(?targetMotifMatchCigarQ6UB28MF_01974255, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1265), '}'), '')))), '[^-]', ''))) AS ?step2266) .
BIND(((?step2266 + ?targetMotifMatchRegionMatchBeginPositionMF_01974256) - 1) AS ?thisPositionOn68) .
BIND(?thisPositionOn68 AS ?thisPositionOn69) .
BIND(?this AS ?pfs1t267) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a64')) AS ?annotation64) .
BIND(?this AS ?pfs63) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch272 faldo:location ?templateMotifSequenceMatchRegionP53582273 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582275 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974268 .
?templateMotifSequenceMatchRegionP53582273 faldo:begin ?templateMotifSequenceMatchBeginP53582274 .
?templateMotifSequenceMatchBeginP53582274 faldo:position ?templateMotifSequenceMatchBeginPositionP53582269 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582275 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch276 faldo:location ?targetMotifMatchRegionMatch277 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974279 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974270 .
?targetMotifMatchRegionMatch277 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974278 .
?targetMotifMatchRegionMatchBeginMF_01974278 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974271 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974279 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974268, 1, (STRLEN(?templateMotifCigarP53582MF_01974268) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974268, CONCAT('^(?:-*[^-]){', STR(((203 - ?templateMotifSequenceMatchBeginPositionP53582269) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1280) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974270, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974270) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974270, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1280), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974270, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974270) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974270, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1280), '}'), '')))), '[^-]', ''))) AS ?step2281) .
BIND(((?step2281 + ?targetMotifMatchRegionMatchBeginPositionMF_01974271) - 1) AS ?thisPositionOn75) .
BIND(?thisPositionOn75 AS ?thisPositionOn76) .
BIND(?this AS ?pfs2t282) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb72) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse73) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn75, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a71')) AS ?annotation71) .
BIND(?this AS ?pfs70) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch287 faldo:location ?templateMotifSequenceMatchRegionP53582288 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582290 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974283 .
?templateMotifSequenceMatchRegionP53582288 faldo:begin ?templateMotifSequenceMatchBeginP53582289 .
?templateMotifSequenceMatchBeginP53582289 faldo:position ?templateMotifSequenceMatchBeginPositionP53582284 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582290 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch291 faldo:location ?targetMotifMatchRegionMatch292 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974294 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974285 .
?targetMotifMatchRegionMatch292 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974293 .
?targetMotifMatchRegionMatchBeginMF_01974293 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974286 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974294 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974283, 1, (STRLEN(?templateMotifCigarP53582MF_01974283) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974283, CONCAT('^(?:-*[^-]){', STR(((220 - ?templateMotifSequenceMatchBeginPositionP53582284) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1295) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974285, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974285) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1295), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974285, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974285) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974285, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1295), '}'), '')))), '[^-]', ''))) AS ?step2296) .
BIND(((?step2296 + ?targetMotifMatchRegionMatchBeginPositionMF_01974286) - 1) AS ?thisPositionOn82) .
BIND(?thisPositionOn82 AS ?thisPositionOn83) .
BIND(?this AS ?pfs2t297) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a78')) AS ?annotation78) .
BIND(?this AS ?pfs77) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch302 faldo:location ?templateMotifSequenceMatchRegionP53582303 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582305 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974298 .
?templateMotifSequenceMatchRegionP53582303 faldo:begin ?templateMotifSequenceMatchBeginP53582304 .
?templateMotifSequenceMatchBeginP53582304 faldo:position ?templateMotifSequenceMatchBeginPositionP53582299 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582305 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch306 faldo:location ?targetMotifMatchRegionMatch307 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974309 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974300 .
?targetMotifMatchRegionMatch307 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974308 .
?targetMotifMatchRegionMatchBeginMF_01974308 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974301 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974309 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974298, 1, (STRLEN(?templateMotifCigarP53582MF_01974298) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974298, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionP53582299) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1310) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974300, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974300) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974300, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974300) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974300, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), '')))), '[^-]', ''))) AS ?step2311) .
BIND(((?step2311 + ?targetMotifMatchRegionMatchBeginPositionMF_01974301) - 1) AS ?thisPositionOn89) .
BIND(?thisPositionOn89 AS ?thisPositionOn90) .
BIND(?this AS ?pfs2t312) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfsb86) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfse87) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn89, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a85')) AS ?annotation85) .
BIND(?this AS ?pfs84) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch317 faldo:location ?templateMotifSequenceMatchRegionP53582318 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582320 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974313 .
?templateMotifSequenceMatchRegionP53582318 faldo:begin ?templateMotifSequenceMatchBeginP53582319 .
?templateMotifSequenceMatchBeginP53582319 faldo:position ?templateMotifSequenceMatchBeginPositionP53582314 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582320 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch321 faldo:location ?targetMotifMatchRegionMatch322 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974324 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974315 .
?targetMotifMatchRegionMatch322 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974323 .
?targetMotifMatchRegionMatchBeginMF_01974323 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974316 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974324 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974313, 1, (STRLEN(?templateMotifCigarP53582MF_01974313) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974313, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionP53582314) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1325) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974315, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974315) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974315, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1325), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974315, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974315) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974315, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1325), '}'), '')))), '[^-]', ''))) AS ?step2326) .
BIND(((?step2326 + ?targetMotifMatchRegionMatchBeginPositionMF_01974316) - 1) AS ?thisPositionOn96) .
BIND(?thisPositionOn96 AS ?thisPositionOn97) .
BIND(?this AS ?pfs2t327) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb93) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse94) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn96, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a92')) AS ?annotation92) .
BIND(?this AS ?pfs91) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch332 faldo:location ?templateMotifSequenceMatchRegionP53582333 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582335 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974328 .
?templateMotifSequenceMatchRegionP53582333 faldo:begin ?templateMotifSequenceMatchBeginP53582334 .
?templateMotifSequenceMatchBeginP53582334 faldo:position ?templateMotifSequenceMatchBeginPositionP53582329 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582335 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch336 faldo:location ?targetMotifMatchRegionMatch337 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974339 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974330 .
?targetMotifMatchRegionMatch337 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974338 .
?targetMotifMatchRegionMatchBeginMF_01974338 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974331 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974339 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974328, 1, (STRLEN(?templateMotifCigarP53582MF_01974328) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974328, CONCAT('^(?:-*[^-]){', STR(((294 - ?templateMotifSequenceMatchBeginPositionP53582329) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1340) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974330, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974330) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974330, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1340), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974330, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974330) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974330, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1340), '}'), '')))), '[^-]', ''))) AS ?step2341) .
BIND(((?step2341 + ?targetMotifMatchRegionMatchBeginPositionMF_01974331) - 1) AS ?thisPositionOn103) .
BIND(?thisPositionOn103 AS ?thisPositionOn104) .
BIND(?this AS ?pfs2t342) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfsb100) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfse101) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn103, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a99')) AS ?annotation99) .
BIND(?this AS ?pfs98) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch347 faldo:location ?templateMotifSequenceMatchRegionP53582348 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582350 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974343 .
?templateMotifSequenceMatchRegionP53582348 faldo:begin ?templateMotifSequenceMatchBeginP53582349 .
?templateMotifSequenceMatchBeginP53582349 faldo:position ?templateMotifSequenceMatchBeginPositionP53582344 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582350 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch351 faldo:location ?targetMotifMatchRegionMatch352 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974354 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974345 .
?targetMotifMatchRegionMatch352 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974353 .
?targetMotifMatchRegionMatchBeginMF_01974353 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974346 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974354 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974343, 1, (STRLEN(?templateMotifCigarP53582MF_01974343) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974343, CONCAT('^(?:-*[^-]){', STR(((301 - ?templateMotifSequenceMatchBeginPositionP53582344) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1355) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974345, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974345) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974345, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1355), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974345, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974345) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974345, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1355), '}'), '')))), '[^-]', ''))) AS ?step2356) .
BIND(((?step2356 + ?targetMotifMatchRegionMatchBeginPositionMF_01974346) - 1) AS ?thisPositionOn110) .
BIND(?thisPositionOn110 AS ?thisPositionOn111) .
BIND(?this AS ?pfs2t357) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfsb107) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfse108) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn110, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a106')) AS ?annotation106) .
BIND(?this AS ?pfs105) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch362 faldo:location ?templateMotifSequenceMatchRegionP53582363 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582365 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974358 .
?templateMotifSequenceMatchRegionP53582363 faldo:begin ?templateMotifSequenceMatchBeginP53582364 .
?templateMotifSequenceMatchBeginP53582364 faldo:position ?templateMotifSequenceMatchBeginPositionP53582359 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582365 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch366 faldo:location ?targetMotifMatchRegionMatch367 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974369 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974360 .
?targetMotifMatchRegionMatch367 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974368 .
?targetMotifMatchRegionMatchBeginMF_01974368 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974361 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974369 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974358, 1, (STRLEN(?templateMotifCigarP53582MF_01974358) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974358, CONCAT('^(?:-*[^-]){', STR(((327 - ?templateMotifSequenceMatchBeginPositionP53582359) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1370) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974360, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974360) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974360, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1370), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974360, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974360) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974360, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1370), '}'), '')))), '[^-]', ''))) AS ?step2371) .
BIND(((?step2371 + ?targetMotifMatchRegionMatchBeginPositionMF_01974361) - 1) AS ?thisPositionOn117) .
BIND(?thisPositionOn117 AS ?thisPositionOn118) .
BIND(?this AS ?pfs2t372) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfsb114) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfse115) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn117, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a113')) AS ?annotation113) .
BIND(?this AS ?pfs112) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch377 faldo:location ?templateMotifSequenceMatchRegionP53582378 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582380 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974373 .
?templateMotifSequenceMatchRegionP53582378 faldo:begin ?templateMotifSequenceMatchBeginP53582379 .
?templateMotifSequenceMatchBeginP53582379 faldo:position ?templateMotifSequenceMatchBeginPositionP53582374 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582380 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch381 faldo:location ?targetMotifMatchRegionMatch382 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974384 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974375 .
?targetMotifMatchRegionMatch382 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974383 .
?targetMotifMatchRegionMatchBeginMF_01974383 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974376 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974384 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974373, 1, (STRLEN(?templateMotifCigarP53582MF_01974373) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974373, CONCAT('^(?:-*[^-]){', STR(((358 - ?templateMotifSequenceMatchBeginPositionP53582374) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1385) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974375, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974375) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1385), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974375, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974375) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974375, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1385), '}'), '')))), '[^-]', ''))) AS ?step2386) .
BIND(((?step2386 + ?targetMotifMatchRegionMatchBeginPositionMF_01974376) - 1) AS ?thisPositionOn124) .
BIND(?thisPositionOn124 AS ?thisPositionOn125) .
BIND(?this AS ?pfs2t387) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb121) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse122) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn124, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a120')) AS ?annotation120) .
BIND(?this AS ?pfs119) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch392 faldo:location ?templateMotifSequenceMatchRegionP53582393 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP53582395 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP53582MF_01974388 .
?templateMotifSequenceMatchRegionP53582393 faldo:begin ?templateMotifSequenceMatchBeginP53582394 .
?templateMotifSequenceMatchBeginP53582394 faldo:position ?templateMotifSequenceMatchBeginPositionP53582389 ;
faldo:reference isoform:P53582-1 .
?templateMotifSequenceProfileAlignmentOperationP53582395 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?targetMotifMatch396 faldo:location ?targetMotifMatchRegionMatch397 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01974399 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP53582MF_01974390 .
?targetMotifMatchRegionMatch397 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01974398 .
?targetMotifMatchRegionMatchBeginMF_01974398 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01974391 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01974399 edam:has_input signature:MF_01974 ;
rdf:type edam:operation_0300 .
?this rdfs:seeAlso .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP53582MF_01974388, 1, (STRLEN(?templateMotifCigarP53582MF_01974388) - STRLEN(REPLACE(?templateMotifCigarP53582MF_01974388, CONCAT('^(?:-*[^-]){', STR(((358 - ?templateMotifSequenceMatchBeginPositionP53582389) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1400) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP53582MF_01974390, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974390) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974390, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1400), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP53582MF_01974390, 1, (STRLEN(?targetMotifMatchCigarP53582MF_01974390) - STRLEN(REPLACE(?targetMotifMatchCigarP53582MF_01974390, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1400), '}'), '')))), '[^-]', ''))) AS ?step2401) .
BIND(((?step2401 + ?targetMotifMatchRegionMatchBeginPositionMF_01974391) - 1) AS ?thisPositionOn131) .
BIND(?thisPositionOn131 AS ?thisPositionOn132) .
BIND(?this AS ?pfs2t402) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb128) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse129) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'E')) .
BIND(URI(CONCAT(STR(?this), '#MF_03174a127')) AS ?annotation127) .
BIND(?this AS ?pfs126) .
}
OPTIONAL {
?this a up:Protein .
?this rdfs:seeAlso .
BIND(?this AS ?case3) .
}
OPTIONAL {
?this a up:Protein .
FILTER (! (EXISTS {
?this rdfs:seeAlso .
})) .
BIND(?this AS ?case4) .
}
}
"xsd:string |
