| http://purl.uniprot.org/unirules/MF_03212#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:884046 up:source unirule:MF_03212 .
_:884047 up:source unirule:MF_03212 .
_:884048 up:source unirule:MF_03212 .
_:884049 up:source unirule:MF_03212 .
_:884050 up:source unirule:MF_03212 .
_:884051 up:source unirule:MF_03212 .
_:884052 up:source unirule:MF_03212 .
_:884053 up:source unirule:MF_03212 .
_:884054 up:source unirule:MF_03212 .
_:884055 up:source unirule:MF_03212 .
_:884056 up:source unirule:MF_03212 .
_:884057 up:source unirule:MF_03212 .
_:884058 up:source unirule:MF_03212 .
_:884059 up:source unirule:MF_03212 .
_:884060 up:source unirule:MF_03212 .
_:884061 up:source unirule:MF_03212 .
_:884062 up:source unirule:MF_03212 .
_:884063 up:source unirule:MF_03212 .
_:884064 up:source unirule:MF_03212 .
_:884065 up:source unirule:MF_03212 .
_:884066 up:source unirule:MF_03212 .
_:884067 up:source unirule:MF_03212 .
_:884068 up:source unirule:MF_03212 .
_:884069 up:source unirule:MF_03212 .
_:884070 up:source unirule:MF_03212 .
_:884071 up:source unirule:MF_03212 .
_:884072 up:source unirule:MF_03212 .
_:884073 up:source unirule:MF_03212 .
_:884074 up:source unirule:MF_03212 .
_:884075 up:source unirule:MF_03212 .
_:884076 up:source unirule:MF_03212 .
_:884077 up:source unirule:MF_03212 .
_:884078 up:source unirule:MF_03212 .
_:884079 up:source unirule:MF_03212 .
_:884080 up:source unirule:MF_03212 .
_:884081 up:source unirule:MF_03212 .
_:884082 up:source unirule:MF_03212 .
_:884083 up:source unirule:MF_03212 .
_:884084 up:source unirule:MF_03212 .
_:884085 up:source unirule:MF_03212 .
_:884086 up:source unirule:MF_03212 .
_:884087 up:source unirule:MF_03212 .
_:884088 up:source unirule:MF_03212 .
_:884089 up:source unirule:MF_03212 .
_:884090 up:source unirule:MF_03212 .
_:884091 up:source unirule:MF_03212 .
_:884092 up:source unirule:MF_03212 .
_:884093 up:source unirule:MF_03212 .
_:884094 up:source unirule:MF_03212 .
_:884095 up:source unirule:MF_03212 .
_:884096 up:source unirule:MF_03212 .
?this up:annotation ?annotation1 ,
?annotation3 ,
?annotation4 ,
?annotation5 ,
?annotation6 ,
?annotation7 ;
up:classifiedWith GO:0003958 ,
GO:0005737 ,
GO:0005789 ,
GO:0010181 ,
GO:0050660 ,
GO:0050661 ,
keyword:256 ,
keyword:274 ,
keyword:285 ,
keyword:288 ,
keyword:472 ,
keyword:521 ,
keyword:560 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.6.2.4' ;
up:fullName 'NADPH--cytochrome P450 reductase' ;
up:shortName 'CPR' ,
'P450R' ;
rdf:type up:Structured_Name .
?annotation1 up:activity ?activity2 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity2 up:catalyticActivity ;
up:enzymeClass .
?annotation3 up:cofactor chebi:57692 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 1 FAD per monomer.' .
?annotation4 up:cofactor chebi:58210 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 1 FMN per monomer.' .
?annotation5 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the NADPH--cytochrome P450 reductase family.' .
?annotation6 a up:Similarity_Annotation ;
rdfs:comment 'In the N-terminal section; belongs to the flavodoxin family.' .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.' .
?case8 up:classifiedWith GO:0005739 ,
GO:0005886 ,
GO:0006696 ,
keyword:1000 ,
keyword:1003 ,
keyword:1207 ,
keyword:443 ,
keyword:444 ,
keyword:496 ,
keyword:752 ,
keyword:753 ,
keyword:756 .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
rdf:type up:Domain_Extent_Annotation ;
rdfs:comment 'Flavodoxin-like' .
?pfsb15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfs19 up:annotation ?annotation20 .
?annotation20 faldo:begin ?pfsb21 ;
faldo:end ?pfse22 ;
up:ligand ?ligand23 ;
rdf:type up:Binding_Site_Annotation .
?pfsb21 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?pfse22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?ligand23 rdfs:subClassOf chebi:58210 .
?pfs26 up:annotation ?annotation27 .
?annotation27 faldo:begin ?pfsb28 ;
faldo:end ?pfse29 ;
up:ligand ?ligand30 ;
rdf:type up:Binding_Site_Annotation .
?pfsb28 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfse29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?ligand30 rdfs:subClassOf chebi:58210 .
?pfs33 up:annotation ?annotation34 .
?annotation34 faldo:begin ?pfsb35 ;
faldo:end ?pfse36 ;
up:ligand ?ligand37 ;
rdf:type up:Binding_Site_Annotation .
?pfsb35 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?pfse36 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?ligand37 rdfs:subClassOf chebi:58210 .
?pfs40 up:annotation ?annotation41 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
up:ligand ?ligand44 ;
rdf:type up:Binding_Site_Annotation .
?pfsb42 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?ligand44 rdfs:subClassOf chebi:57692 .
?pfs47 up:annotation ?annotation48 .
?annotation48 faldo:begin ?pfsb49 ;
faldo:end ?pfse50 ;
up:ligand ?ligand51 ;
rdf:type up:Binding_Site_Annotation .
?pfsb49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?pfse50 faldo:position ?thisPositionOn53 ;
rdf:type faldo:ExactPosition .
?ligand51 rdfs:subClassOf chebi:57692 .
?pfs54 up:annotation ?annotation55 .
?annotation55 faldo:begin ?pfsb56 ;
faldo:end ?pfse57 ;
up:ligand ?ligand58 ;
rdf:type up:Binding_Site_Annotation .
?pfsb56 faldo:position ?thisPositionOn59 ;
rdf:type faldo:ExactPosition .
?pfse57 faldo:position ?thisPositionOn60 ;
rdf:type faldo:ExactPosition .
?ligand58 rdfs:subClassOf chebi:57692 .
?pfs61 up:annotation ?annotation62 .
?annotation62 faldo:begin ?pfsb63 ;
faldo:end ?pfse64 ;
up:ligand ?ligand65 ;
rdf:type up:Binding_Site_Annotation .
?pfsb63 faldo:position ?thisPositionOn66 ;
rdf:type faldo:ExactPosition .
?pfse64 faldo:position ?thisPositionOn67 ;
rdf:type faldo:ExactPosition .
?ligand65 rdfs:subClassOf chebi:58349 .
?pfs68 up:annotation ?annotation69 .
?annotation69 faldo:begin ?pfsb70 ;
faldo:end ?pfse71 ;
up:ligand ?ligand72 ;
rdf:type up:Binding_Site_Annotation .
?pfsb70 faldo:position ?thisPositionOn73 ;
rdf:type faldo:ExactPosition .
?pfse71 faldo:position ?thisPositionOn74 ;
rdf:type faldo:ExactPosition .
?ligand72 rdfs:subClassOf chebi:58349 .
?pfs75 up:annotation ?annotation76 .
?annotation76 faldo:begin ?pfsb77 ;
faldo:end ?pfse78 ;
up:ligand ?ligand79 ;
rdf:type up:Binding_Site_Annotation .
?pfsb77 faldo:position ?thisPositionOn80 ;
rdf:type faldo:ExactPosition .
?pfse78 faldo:position ?thisPositionOn81 ;
rdf:type faldo:ExactPosition .
?ligand79 rdfs:subClassOf chebi:58210 .
?pfs82 up:annotation ?annotation83 .
?annotation83 faldo:begin ?pfsb84 ;
faldo:end ?pfse85 ;
up:ligand ?ligand86 ;
rdf:type up:Binding_Site_Annotation .
?pfsb84 faldo:position ?thisPositionOn87 ;
rdf:type faldo:ExactPosition .
?pfse85 faldo:position ?thisPositionOn88 ;
rdf:type faldo:ExactPosition .
?ligand86 rdfs:subClassOf chebi:58349 .
?pfs89 up:annotation ?annotation90 .
?annotation90 faldo:begin ?pfsb91 ;
faldo:end ?pfse92 ;
up:ligand ?ligand93 ;
rdf:type up:Binding_Site_Annotation .
?pfsb91 faldo:position ?thisPositionOn94 ;
rdf:type faldo:ExactPosition .
?pfse92 faldo:position ?thisPositionOn95 ;
rdf:type faldo:ExactPosition .
?ligand93 rdfs:subClassOf chebi:57692 .
?pfs96 up:annotation ?annotation97 .
?annotation97 faldo:begin ?pfsb98 ;
faldo:end ?pfse99 ;
up:ligand ?ligand100 ;
rdf:type up:Binding_Site_Annotation .
?pfsb98 faldo:position ?thisPositionOn101 ;
rdf:type faldo:ExactPosition .
?pfse99 faldo:position ?thisPositionOn102 ;
rdf:type faldo:ExactPosition .
?ligand100 rdfs:subClassOf chebi:57692 .
?pfs103 up:annotation ?annotation104 .
?annotation104 faldo:begin ?pfsb105 ;
faldo:end ?pfse106 ;
up:ligand ?ligand107 ;
rdf:type up:Binding_Site_Annotation .
?pfsb105 faldo:position ?thisPositionOn108 ;
rdf:type faldo:ExactPosition .
?pfse106 faldo:position ?thisPositionOn109 ;
rdf:type faldo:ExactPosition .
?ligand107 rdfs:subClassOf chebi:58349 .
?pfs110 up:annotation ?annotation111 .
?annotation111 faldo:begin ?pfsb112 ;
faldo:end ?pfse113 ;
up:ligand ?ligand114 ;
rdf:type up:Binding_Site_Annotation .
?pfsb112 faldo:position ?thisPositionOn115 ;
rdf:type faldo:ExactPosition .
?pfse113 faldo:position ?thisPositionOn116 ;
rdf:type faldo:ExactPosition .
?ligand114 rdfs:subClassOf chebi:58349 .
?pfs117 up:annotation ?annotation118 .
?annotation118 faldo:begin ?pfsb119 ;
faldo:end ?pfse120 ;
up:ligand ?ligand121 ;
rdf:type up:Binding_Site_Annotation .
?pfsb119 faldo:position ?thisPositionOn122 ;
rdf:type faldo:ExactPosition .
?pfse120 faldo:position ?thisPositionOn123 ;
rdf:type faldo:ExactPosition .
?ligand121 rdfs:subClassOf chebi:57692 .
?sam124 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane125 faldo:begin ?transmembraneb126 ;
faldo:end ?transmembranee127 .
?transmembraneb126 faldo:position ?transmembranebp128 .
?transmembranee127 faldo:position ?transmembraneep129 .
?keyword130 up:range ?transmembrane125 .
?keyword131 up:range ?transmembrane125 .
?keyword132 up:range ?transmembrane125 .
_:884097 a rdf:Statement ;
up:attribution _:884046 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:884098 a rdf:Statement ;
up:attribution _:884047 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation1 .
_:884099 a rdf:Statement ;
up:attribution _:884048 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:884100 a rdf:Statement ;
up:attribution _:884049 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:884101 a rdf:Statement ;
up:attribution _:884050 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:884102 a rdf:Statement ;
up:attribution _:884051 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:884103 a rdf:Statement ;
up:attribution _:884052 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:884104 a rdf:Statement ;
up:attribution _:884053 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:256 .
_:884105 a rdf:Statement ;
up:attribution _:884054 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:274 .
_:884106 a rdf:Statement ;
up:attribution _:884055 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:285 .
_:884107 a rdf:Statement ;
up:attribution _:884056 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:288 .
_:884108 a rdf:Statement ;
up:attribution _:884057 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:884109 a rdf:Statement ;
up:attribution _:884058 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:521 .
_:884110 a rdf:Statement ;
up:attribution _:884059 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:884111 a rdf:Statement ;
up:attribution _:884060 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:884112 a rdf:Statement ;
up:attribution _:884061 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005789 .
_:884113 a rdf:Statement ;
up:attribution _:884062 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0050660 .
_:884114 a rdf:Statement ;
up:attribution _:884063 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0010181 .
_:884115 a rdf:Statement ;
up:attribution _:884064 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0050661 .
_:884116 a rdf:Statement ;
up:attribution _:884065 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0003958 .
_:884117 a rdf:Statement ;
up:attribution _:884066 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:884118 a rdf:Statement ;
up:attribution _:884067 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:496 .
_:884119 a rdf:Statement ;
up:attribution _:884068 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1000 .
_:884120 a rdf:Statement ;
up:attribution _:884069 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:444 .
_:884121 a rdf:Statement ;
up:attribution _:884070 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:443 .
_:884122 a rdf:Statement ;
up:attribution _:884071 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:752 .
_:884123 a rdf:Statement ;
up:attribution _:884072 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:753 .
_:884124 a rdf:Statement ;
up:attribution _:884073 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:756 .
_:884125 a rdf:Statement ;
up:attribution _:884074 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1207 .
_:884126 a rdf:Statement ;
up:attribution _:884075 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005739 .
_:884127 a rdf:Statement ;
up:attribution _:884076 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:884128 a rdf:Statement ;
up:attribution _:884077 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006696 .
_:884129 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:884130 a rdf:Statement ;
up:attribution _:884078 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:884131 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
_:884132 a rdf:Statement ;
up:attribution _:884079 ;
rdf:subject ?pfs19 ;
rdf:predicate up:annotation ;
rdf:object ?annotation20 .
_:884133 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:884134 a rdf:Statement ;
up:attribution _:884080 ;
rdf:subject ?pfs26 ;
rdf:predicate up:annotation ;
rdf:object ?annotation27 .
_:884135 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs33 ;
rdf:predicate up:annotation ;
rdf:object ?annotation34 .
_:884136 a rdf:Statement ;
up:attribution _:884081 ;
rdf:subject ?pfs33 ;
rdf:predicate up:annotation ;
rdf:object ?annotation34 .
_:884137 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:884138 a rdf:Statement ;
up:attribution _:884082 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:884139 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs47 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:884140 a rdf:Statement ;
up:attribution _:884083 ;
rdf:subject ?pfs47 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:884141 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:884142 a rdf:Statement ;
up:attribution _:884084 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:884143 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs61 ;
rdf:predicate up:annotation ;
rdf:object ?annotation62 .
_:884144 a rdf:Statement ;
up:attribution _:884085 ;
rdf:subject ?pfs61 ;
rdf:predicate up:annotation ;
rdf:object ?annotation62 .
_:884145 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs68 ;
rdf:predicate up:annotation ;
rdf:object ?annotation69 .
_:884146 a rdf:Statement ;
up:attribution _:884086 ;
rdf:subject ?pfs68 ;
rdf:predicate up:annotation ;
rdf:object ?annotation69 .
_:884147 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs75 ;
rdf:predicate up:annotation ;
rdf:object ?annotation76 .
_:884148 a rdf:Statement ;
up:attribution _:884087 ;
rdf:subject ?pfs75 ;
rdf:predicate up:annotation ;
rdf:object ?annotation76 .
_:884149 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs82 ;
rdf:predicate up:annotation ;
rdf:object ?annotation83 .
_:884150 a rdf:Statement ;
up:attribution _:884088 ;
rdf:subject ?pfs82 ;
rdf:predicate up:annotation ;
rdf:object ?annotation83 .
_:884151 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs89 ;
rdf:predicate up:annotation ;
rdf:object ?annotation90 .
_:884152 a rdf:Statement ;
up:attribution _:884089 ;
rdf:subject ?pfs89 ;
rdf:predicate up:annotation ;
rdf:object ?annotation90 .
_:884153 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs96 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:884154 a rdf:Statement ;
up:attribution _:884090 ;
rdf:subject ?pfs96 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:884155 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs103 ;
rdf:predicate up:annotation ;
rdf:object ?annotation104 .
_:884156 a rdf:Statement ;
up:attribution _:884091 ;
rdf:subject ?pfs103 ;
rdf:predicate up:annotation ;
rdf:object ?annotation104 .
_:884157 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs110 ;
rdf:predicate up:annotation ;
rdf:object ?annotation111 .
_:884158 a rdf:Statement ;
up:attribution _:884092 ;
rdf:subject ?pfs110 ;
rdf:predicate up:annotation ;
rdf:object ?annotation111 .
_:884159 a rdf:Statement ;
up:source unirule:MF_03212 ;
rdf:subject ?pfs117 ;
rdf:predicate up:annotation ;
rdf:object ?annotation118 .
_:884160 a rdf:Statement ;
up:attribution _:884093 ;
rdf:subject ?pfs117 ;
rdf:predicate up:annotation ;
rdf:object ?annotation118 .
_:884161 a rdf:Statement ;
up:attribution _:884094 ;
rdf:subject ?sam124 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:884162 a rdf:Statement ;
up:attribution _:884095 ;
rdf:subject ?sam124 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:884163 a rdf:Statement ;
up:attribution _:884096 ;
rdf:subject ?sam124 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_03212
#Rule MF_03212 Created by:? on:2015-11-20 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_03212 .
?thisOrganism rdfs:subClassOf+ taxon:2759 .
BIND(URI(CONCAT(STR(?this), '#MF_03212a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a1')) AS ?annotation1) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch137 faldo:location ?templateMotifSequenceMatchRegionP00388138 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388140 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212133 .
?templateMotifSequenceMatchRegionP00388138 faldo:begin ?templateMotifSequenceMatchBeginP00388139 .
?templateMotifSequenceMatchBeginP00388139 faldo:position ?templateMotifSequenceMatchBeginPositionP00388134 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388140 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch141 faldo:location ?targetMotifMatchRegionMatch142 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212144 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212135 .
?targetMotifMatchRegionMatch142 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212143 .
?targetMotifMatchRegionMatchBeginMF_03212143 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212136 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212144 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212133, 1, (STRLEN(?templateMotifCigarP00388MF_03212133) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212133, CONCAT('^(?:-*[^-]){', STR(((80 - ?templateMotifSequenceMatchBeginPositionP00388134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1145) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212135, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212135) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212135, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212135) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1145), '}'), '')))), '[^-]', ''))) AS ?step2146) .
BIND(((?step2146 + ?targetMotifMatchRegionMatchBeginPositionMF_03212136) - 1) AS ?thisPositionOn17) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212133, 1, (STRLEN(?templateMotifCigarP00388MF_03212133) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212133, CONCAT('^(?:-*[^-]){', STR(((224 - ?templateMotifSequenceMatchBeginPositionP00388134) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1147) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212135, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212135) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212135, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212135) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212135, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1147), '}'), '')))), '[^-]', ''))) AS ?step2148) .
BIND(((?step2148 + ?targetMotifMatchRegionMatchBeginPositionMF_03212136) - 1) AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t149) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse16) .
FILTER ((BOUND(?thisPositionOn17) && BOUND(?thisPositionOn18))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch154 faldo:location ?templateMotifSequenceMatchRegionP00388155 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388157 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212150 .
?templateMotifSequenceMatchRegionP00388155 faldo:begin ?templateMotifSequenceMatchBeginP00388156 .
?templateMotifSequenceMatchBeginP00388156 faldo:position ?templateMotifSequenceMatchBeginPositionP00388151 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388157 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch158 faldo:location ?targetMotifMatchRegionMatch159 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212161 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212152 .
?targetMotifMatchRegionMatch159 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212160 .
?targetMotifMatchRegionMatchBeginMF_03212160 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212153 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212161 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212150, 1, (STRLEN(?templateMotifCigarP00388MF_03212150) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212150, CONCAT('^(?:-*[^-]){', STR(((86 - ?templateMotifSequenceMatchBeginPositionP00388151) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1162) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212152, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212152) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212152, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212152) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), '')))), '[^-]', ''))) AS ?step2163) .
BIND(((?step2163 + ?targetMotifMatchRegionMatchBeginPositionMF_03212153) - 1) AS ?thisPositionOn24) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212150, 1, (STRLEN(?templateMotifCigarP00388MF_03212150) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212150, CONCAT('^(?:-*[^-]){', STR(((91 - ?templateMotifSequenceMatchBeginPositionP00388151) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1164) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212152, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212152) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1164), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212152, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212152) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212152, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1164), '}'), '')))), '[^-]', ''))) AS ?step2165) .
BIND(((?step2165 + ?targetMotifMatchRegionMatchBeginPositionMF_03212153) - 1) AS ?thisPositionOn25) .
BIND(?this AS ?pfs1t166) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) .
FILTER (REGEX('[ST]QTGT[AG]', SUBSTR(?thisSequenceValue, ?thisPositionOn24, (?thisPositionOn25 - ?thisPositionOn24)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a20')) AS ?annotation20) .
BIND(?this AS ?pfs19) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch171 faldo:location ?templateMotifSequenceMatchRegionP00388172 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388174 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212167 .
?templateMotifSequenceMatchRegionP00388172 faldo:begin ?templateMotifSequenceMatchBeginP00388173 .
?templateMotifSequenceMatchBeginP00388173 faldo:position ?templateMotifSequenceMatchBeginPositionP00388168 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388174 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch175 faldo:location ?targetMotifMatchRegionMatch176 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212178 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212169 .
?targetMotifMatchRegionMatch176 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212177 .
?targetMotifMatchRegionMatchBeginMF_03212177 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212170 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212178 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212167, 1, (STRLEN(?templateMotifCigarP00388MF_03212167) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212167, CONCAT('^(?:-*[^-]){', STR(((138 - ?templateMotifSequenceMatchBeginPositionP00388168) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1179) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212169, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212169) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1179), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212169, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212169) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1179), '}'), '')))), '[^-]', ''))) AS ?step2180) .
BIND(((?step2180 + ?targetMotifMatchRegionMatchBeginPositionMF_03212170) - 1) AS ?thisPositionOn31) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212167, 1, (STRLEN(?templateMotifCigarP00388MF_03212167) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212167, CONCAT('^(?:-*[^-]){', STR(((141 - ?templateMotifSequenceMatchBeginPositionP00388168) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1181) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212169, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212169) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1181), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212169, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212169) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1181), '}'), '')))), '[^-]', ''))) AS ?step2182) .
BIND(((?step2182 + ?targetMotifMatchRegionMatchBeginPositionMF_03212170) - 1) AS ?thisPositionOn32) .
BIND(?this AS ?pfs1t183) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse29) .
FILTER (REGEX('[AS]TYG', SUBSTR(?thisSequenceValue, ?thisPositionOn31, (?thisPositionOn32 - ?thisPositionOn31)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a27')) AS ?annotation27) .
BIND(?this AS ?pfs26) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch188 faldo:location ?templateMotifSequenceMatchRegionP00388189 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388191 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212184 .
?templateMotifSequenceMatchRegionP00388189 faldo:begin ?templateMotifSequenceMatchBeginP00388190 .
?templateMotifSequenceMatchBeginP00388190 faldo:position ?templateMotifSequenceMatchBeginPositionP00388185 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388191 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch192 faldo:location ?targetMotifMatchRegionMatch193 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212195 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212186 .
?targetMotifMatchRegionMatch193 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212194 .
?targetMotifMatchRegionMatchBeginMF_03212194 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212187 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212195 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212184, 1, (STRLEN(?templateMotifCigarP00388MF_03212184) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212184, CONCAT('^(?:-*[^-]){', STR(((173 - ?templateMotifSequenceMatchBeginPositionP00388185) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1196) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212186, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212186) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212186, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212186) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1196), '}'), '')))), '[^-]', ''))) AS ?step2197) .
BIND(((?step2197 + ?targetMotifMatchRegionMatchBeginPositionMF_03212187) - 1) AS ?thisPositionOn38) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212184, 1, (STRLEN(?templateMotifCigarP00388MF_03212184) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212184, CONCAT('^(?:-*[^-]){', STR(((182 - ?templateMotifSequenceMatchBeginPositionP00388185) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1198) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212186, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212186) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1198), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212186, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212186) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212186, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1198), '}'), '')))), '[^-]', ''))) AS ?step2199) .
BIND(((?step2199 + ?targetMotifMatchRegionMatchBeginPositionMF_03212187) - 1) AS ?thisPositionOn39) .
BIND(?this AS ?pfs1t200) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) .
FILTER (REGEX('LG[ND][ARNDCQEGHILKMFPSTWYVBZJUOX][TQ]YE[ARNDCQEGHILKMFPSTWYVBZJUOX][FY][NQ]', SUBSTR(?thisSequenceValue, ?thisPositionOn38, (?thisPositionOn39 - ?thisPositionOn38)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a34')) AS ?annotation34) .
BIND(?this AS ?pfs33) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch205 faldo:location ?templateMotifSequenceMatchRegionP00388206 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388208 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212201 .
?templateMotifSequenceMatchRegionP00388206 faldo:begin ?templateMotifSequenceMatchBeginP00388207 .
?templateMotifSequenceMatchBeginP00388207 faldo:position ?templateMotifSequenceMatchBeginPositionP00388202 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388208 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch209 faldo:location ?targetMotifMatchRegionMatch210 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212212 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212203 .
?targetMotifMatchRegionMatch210 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212211 .
?targetMotifMatchRegionMatchBeginMF_03212211 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212204 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212212 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212201, 1, (STRLEN(?templateMotifCigarP00388MF_03212201) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212201, CONCAT('^(?:-*[^-]){', STR(((454 - ?templateMotifSequenceMatchBeginPositionP00388202) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1213) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212203, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212203) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212203, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212203) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), '')))), '[^-]', ''))) AS ?step2214) .
BIND(((?step2214 + ?targetMotifMatchRegionMatchBeginPositionMF_03212204) - 1) AS ?thisPositionOn45) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212201, 1, (STRLEN(?templateMotifCigarP00388MF_03212201) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212201, CONCAT('^(?:-*[^-]){', STR(((457 - ?templateMotifSequenceMatchBeginPositionP00388202) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1215) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212203, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212203) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212203, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212203) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), '')))), '[^-]', ''))) AS ?step2216) .
BIND(((?step2216 + ?targetMotifMatchRegionMatchBeginPositionMF_03212204) - 1) AS ?thisPositionOn46) .
BIND(?this AS ?pfs1t217) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) .
FILTER (REGEX('R[YF]YS', SUBSTR(?thisSequenceValue, ?thisPositionOn45, (?thisPositionOn46 - ?thisPositionOn45)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a41')) AS ?annotation41) .
BIND(?this AS ?pfs40) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch222 faldo:location ?templateMotifSequenceMatchRegionP00388223 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388225 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212218 .
?templateMotifSequenceMatchRegionP00388223 faldo:begin ?templateMotifSequenceMatchBeginP00388224 .
?templateMotifSequenceMatchBeginP00388224 faldo:position ?templateMotifSequenceMatchBeginPositionP00388219 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388225 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch226 faldo:location ?targetMotifMatchRegionMatch227 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212229 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212220 .
?targetMotifMatchRegionMatch227 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212228 .
?targetMotifMatchRegionMatchBeginMF_03212228 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212221 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212229 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212218, 1, (STRLEN(?templateMotifCigarP00388MF_03212218) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212218, CONCAT('^(?:-*[^-]){', STR(((472 - ?templateMotifSequenceMatchBeginPositionP00388219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212220, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212220) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212220, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212220) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) .
BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_03212221) - 1) AS ?thisPositionOn52) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212218, 1, (STRLEN(?templateMotifCigarP00388MF_03212218) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212218, CONCAT('^(?:-*[^-]){', STR(((474 - ?templateMotifSequenceMatchBeginPositionP00388219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212220, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212220) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212220, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212220) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) .
BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_03212221) - 1) AS ?thisPositionOn53) .
BIND(?this AS ?pfs1t234) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) .
FILTER (REGEX('[CT][ARNDCQEGHILKMFPSTWYVBZJUOX][AVI]', SUBSTR(?thisSequenceValue, ?thisPositionOn52, (?thisPositionOn53 - ?thisPositionOn52)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a48')) AS ?annotation48) .
BIND(?this AS ?pfs47) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch239 faldo:location ?templateMotifSequenceMatchRegionP00388240 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388242 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212235 .
?templateMotifSequenceMatchRegionP00388240 faldo:begin ?templateMotifSequenceMatchBeginP00388241 .
?templateMotifSequenceMatchBeginP00388241 faldo:position ?templateMotifSequenceMatchBeginPositionP00388236 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388242 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch243 faldo:location ?targetMotifMatchRegionMatch244 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212246 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212237 .
?targetMotifMatchRegionMatch244 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212245 .
?targetMotifMatchRegionMatchBeginMF_03212245 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212238 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212246 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212235, 1, (STRLEN(?templateMotifCigarP00388MF_03212235) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212235, CONCAT('^(?:-*[^-]){', STR(((488 - ?templateMotifSequenceMatchBeginPositionP00388236) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1247) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212237, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212237) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212237, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212237) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), '')))), '[^-]', ''))) AS ?step2248) .
BIND(((?step2248 + ?targetMotifMatchRegionMatchBeginPositionMF_03212238) - 1) AS ?thisPositionOn59) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212235, 1, (STRLEN(?templateMotifCigarP00388MF_03212235) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212235, CONCAT('^(?:-*[^-]){', STR(((491 - ?templateMotifSequenceMatchBeginPositionP00388236) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1249) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212237, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212237) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1249), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212237, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212237) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1249), '}'), '')))), '[^-]', ''))) AS ?step2250) .
BIND(((?step2250 + ?targetMotifMatchRegionMatchBeginPositionMF_03212238) - 1) AS ?thisPositionOn60) .
BIND(?this AS ?pfs1t251) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) .
FILTER (REGEX('G[VL][ARNDCQEGHILKMFPSTWYVBZJUOX][ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn59, (?thisPositionOn60 - ?thisPositionOn59)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a55')) AS ?annotation55) .
BIND(?this AS ?pfs54) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch256 faldo:location ?templateMotifSequenceMatchRegionP00388257 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388259 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212252 .
?templateMotifSequenceMatchRegionP00388257 faldo:begin ?templateMotifSequenceMatchBeginP00388258 .
?templateMotifSequenceMatchBeginP00388258 faldo:position ?templateMotifSequenceMatchBeginPositionP00388253 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388259 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch260 faldo:location ?targetMotifMatchRegionMatch261 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212263 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212254 .
?targetMotifMatchRegionMatch261 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212262 .
?targetMotifMatchRegionMatchBeginMF_03212262 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212255 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212263 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212252, 1, (STRLEN(?templateMotifCigarP00388MF_03212252) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212252, CONCAT('^(?:-*[^-]){', STR(((596 - ?templateMotifSequenceMatchBeginPositionP00388253) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1264) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212254, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212254) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212254, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212254) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), '')))), '[^-]', ''))) AS ?step2265) .
BIND(((?step2265 + ?targetMotifMatchRegionMatchBeginPositionMF_03212255) - 1) AS ?thisPositionOn66) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212252, 1, (STRLEN(?templateMotifCigarP00388MF_03212252) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212252, CONCAT('^(?:-*[^-]){', STR(((597 - ?templateMotifSequenceMatchBeginPositionP00388253) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1266) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212254, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212254) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212254, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212254) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), '')))), '[^-]', ''))) AS ?step2267) .
BIND(((?step2267 + ?targetMotifMatchRegionMatchBeginPositionMF_03212255) - 1) AS ?thisPositionOn67) .
BIND(?this AS ?pfs1t268) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb63) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse64) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn66, (?thisPositionOn67 - ?thisPositionOn66)) = 'SR')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a62')) AS ?annotation62) .
BIND(?this AS ?pfs61) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch273 faldo:location ?templateMotifSequenceMatchRegionP00388274 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388276 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212269 .
?templateMotifSequenceMatchRegionP00388274 faldo:begin ?templateMotifSequenceMatchBeginP00388275 .
?templateMotifSequenceMatchBeginP00388275 faldo:position ?templateMotifSequenceMatchBeginPositionP00388270 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388276 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch277 faldo:location ?targetMotifMatchRegionMatch278 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212280 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212271 .
?targetMotifMatchRegionMatch278 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212279 .
?targetMotifMatchRegionMatchBeginMF_03212279 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212272 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212280 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212269, 1, (STRLEN(?templateMotifCigarP00388MF_03212269) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212269, CONCAT('^(?:-*[^-]){', STR(((602 - ?templateMotifSequenceMatchBeginPositionP00388270) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1281) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212271, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212271) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1281), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212271, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212271) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1281), '}'), '')))), '[^-]', ''))) AS ?step2282) .
BIND(((?step2282 + ?targetMotifMatchRegionMatchBeginPositionMF_03212272) - 1) AS ?thisPositionOn73) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212269, 1, (STRLEN(?templateMotifCigarP00388MF_03212269) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212269, CONCAT('^(?:-*[^-]){', STR(((606 - ?templateMotifSequenceMatchBeginPositionP00388270) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1283) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212271, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212271) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1283), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212271, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212271) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212271, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1283), '}'), '')))), '[^-]', ''))) AS ?step2284) .
BIND(((?step2284 + ?targetMotifMatchRegionMatchBeginPositionMF_03212272) - 1) AS ?thisPositionOn74) .
BIND(?this AS ?pfs1t285) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb70) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse71) .
FILTER (REGEX('K[ARNDCQEGHILKMFPSTWYVBZJUOX]YV[QT]', SUBSTR(?thisSequenceValue, ?thisPositionOn73, (?thisPositionOn74 - ?thisPositionOn73)))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a69')) AS ?annotation69) .
BIND(?this AS ?pfs68) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch290 faldo:location ?templateMotifSequenceMatchRegionP00388291 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388293 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212286 .
?templateMotifSequenceMatchRegionP00388291 faldo:begin ?templateMotifSequenceMatchBeginP00388292 .
?templateMotifSequenceMatchBeginP00388292 faldo:position ?templateMotifSequenceMatchBeginPositionP00388287 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388293 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch294 faldo:location ?targetMotifMatchRegionMatch295 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212297 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212288 .
?targetMotifMatchRegionMatch295 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212296 .
?targetMotifMatchRegionMatchBeginMF_03212296 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212289 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212297 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212286, 1, (STRLEN(?templateMotifCigarP00388MF_03212286) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212286, CONCAT('^(?:-*[^-]){', STR(((208 - ?templateMotifSequenceMatchBeginPositionP00388287) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1298) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212288, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212288) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1298), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212288, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212288) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212288, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1298), '}'), '')))), '[^-]', ''))) AS ?step2299) .
BIND(((?step2299 + ?targetMotifMatchRegionMatchBeginPositionMF_03212289) - 1) AS ?thisPositionOn80) .
BIND(?thisPositionOn80 AS ?thisPositionOn81) .
BIND(?this AS ?pfs1t300) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb77) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse78) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a76')) AS ?annotation76) .
BIND(?this AS ?pfs75) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch305 faldo:location ?templateMotifSequenceMatchRegionP00388306 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388308 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212301 .
?templateMotifSequenceMatchRegionP00388306 faldo:begin ?templateMotifSequenceMatchBeginP00388307 .
?templateMotifSequenceMatchBeginP00388307 faldo:position ?templateMotifSequenceMatchBeginPositionP00388302 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388308 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch309 faldo:location ?targetMotifMatchRegionMatch310 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212312 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212303 .
?targetMotifMatchRegionMatch310 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212311 .
?targetMotifMatchRegionMatchBeginMF_03212311 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212304 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212312 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212301, 1, (STRLEN(?templateMotifCigarP00388MF_03212301) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212301, CONCAT('^(?:-*[^-]){', STR(((298 - ?templateMotifSequenceMatchBeginPositionP00388302) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1313) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212303, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212303) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212303, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1313), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212303, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212303) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212303, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1313), '}'), '')))), '[^-]', ''))) AS ?step2314) .
BIND(((?step2314 + ?targetMotifMatchRegionMatchBeginPositionMF_03212304) - 1) AS ?thisPositionOn87) .
BIND(?thisPositionOn87 AS ?thisPositionOn88) .
BIND(?this AS ?pfs1t315) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb84) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse85) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn87, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a83')) AS ?annotation83) .
BIND(?this AS ?pfs82) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch320 faldo:location ?templateMotifSequenceMatchRegionP00388321 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388323 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212316 .
?templateMotifSequenceMatchRegionP00388321 faldo:begin ?templateMotifSequenceMatchBeginP00388322 .
?templateMotifSequenceMatchBeginP00388322 faldo:position ?templateMotifSequenceMatchBeginPositionP00388317 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388323 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch324 faldo:location ?targetMotifMatchRegionMatch325 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212327 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212318 .
?targetMotifMatchRegionMatch325 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212326 .
?targetMotifMatchRegionMatchBeginMF_03212326 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212319 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212327 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212316, 1, (STRLEN(?templateMotifCigarP00388MF_03212316) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212316, CONCAT('^(?:-*[^-]){', STR(((424 - ?templateMotifSequenceMatchBeginPositionP00388317) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1328) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212318, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212318) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212318, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1328), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212318, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212318) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212318, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1328), '}'), '')))), '[^-]', ''))) AS ?step2329) .
BIND(((?step2329 + ?targetMotifMatchRegionMatchBeginPositionMF_03212319) - 1) AS ?thisPositionOn94) .
BIND(?thisPositionOn94 AS ?thisPositionOn95) .
BIND(?this AS ?pfs1t330) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb91) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse92) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn94, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a90')) AS ?annotation90) .
BIND(?this AS ?pfs89) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch335 faldo:location ?templateMotifSequenceMatchRegionP00388336 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388338 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212331 .
?templateMotifSequenceMatchRegionP00388336 faldo:begin ?templateMotifSequenceMatchBeginP00388337 .
?templateMotifSequenceMatchBeginP00388337 faldo:position ?templateMotifSequenceMatchBeginPositionP00388332 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388338 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch339 faldo:location ?targetMotifMatchRegionMatch340 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212342 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212333 .
?targetMotifMatchRegionMatch340 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212341 .
?targetMotifMatchRegionMatchBeginMF_03212341 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212334 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212342 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212331, 1, (STRLEN(?templateMotifCigarP00388MF_03212331) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212331, CONCAT('^(?:-*[^-]){', STR(((478 - ?templateMotifSequenceMatchBeginPositionP00388332) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1343) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212333, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212333) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212333, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1343), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212333, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212333) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212333, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1343), '}'), '')))), '[^-]', ''))) AS ?step2344) .
BIND(((?step2344 + ?targetMotifMatchRegionMatchBeginPositionMF_03212334) - 1) AS ?thisPositionOn101) .
BIND(?thisPositionOn101 AS ?thisPositionOn102) .
BIND(?this AS ?pfs1t345) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfsb98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfse99) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn101, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a97')) AS ?annotation97) .
BIND(?this AS ?pfs96) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch350 faldo:location ?templateMotifSequenceMatchRegionP00388351 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388353 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212346 .
?templateMotifSequenceMatchRegionP00388351 faldo:begin ?templateMotifSequenceMatchBeginP00388352 .
?templateMotifSequenceMatchBeginP00388352 faldo:position ?templateMotifSequenceMatchBeginPositionP00388347 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388353 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch354 faldo:location ?targetMotifMatchRegionMatch355 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212357 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212348 .
?targetMotifMatchRegionMatch355 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212356 .
?targetMotifMatchRegionMatchBeginMF_03212356 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212349 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212357 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212346, 1, (STRLEN(?templateMotifCigarP00388MF_03212346) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212346, CONCAT('^(?:-*[^-]){', STR(((535 - ?templateMotifSequenceMatchBeginPositionP00388347) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1358) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212348, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212348) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212348, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1358), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212348, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212348) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212348, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1358), '}'), '')))), '[^-]', ''))) AS ?step2359) .
BIND(((?step2359 + ?targetMotifMatchRegionMatchBeginPositionMF_03212349) - 1) AS ?thisPositionOn108) .
BIND(?thisPositionOn108 AS ?thisPositionOn109) .
BIND(?this AS ?pfs1t360) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfsb105) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfse106) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn108, 1) = 'T')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a104')) AS ?annotation104) .
BIND(?this AS ?pfs103) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch365 faldo:location ?templateMotifSequenceMatchRegionP00388366 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388368 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212361 .
?templateMotifSequenceMatchRegionP00388366 faldo:begin ?templateMotifSequenceMatchBeginP00388367 .
?templateMotifSequenceMatchBeginP00388367 faldo:position ?templateMotifSequenceMatchBeginPositionP00388362 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388368 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch369 faldo:location ?targetMotifMatchRegionMatch370 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212372 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212363 .
?targetMotifMatchRegionMatch370 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212371 .
?targetMotifMatchRegionMatchBeginMF_03212371 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212364 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212372 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212361, 1, (STRLEN(?templateMotifCigarP00388MF_03212361) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212361, CONCAT('^(?:-*[^-]){', STR(((639 - ?templateMotifSequenceMatchBeginPositionP00388362) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1373) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212363, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212363) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212363, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1373), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212363, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212363) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212363, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1373), '}'), '')))), '[^-]', ''))) AS ?step2374) .
BIND(((?step2374 + ?targetMotifMatchRegionMatchBeginPositionMF_03212364) - 1) AS ?thisPositionOn115) .
BIND(?thisPositionOn115 AS ?thisPositionOn116) .
BIND(?this AS ?pfs1t375) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn115))) AS ?pfsb112) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn116))) AS ?pfse113) .
FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn115, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a111')) AS ?annotation111) .
BIND(?this AS ?pfs110) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch380 faldo:location ?templateMotifSequenceMatchRegionP00388381 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP00388383 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP00388MF_03212376 .
?templateMotifSequenceMatchRegionP00388381 faldo:begin ?templateMotifSequenceMatchBeginP00388382 .
?templateMotifSequenceMatchBeginP00388382 faldo:position ?templateMotifSequenceMatchBeginPositionP00388377 ;
faldo:reference isoform:P00388-1 .
?templateMotifSequenceProfileAlignmentOperationP00388383 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
?targetMotifMatch384 faldo:location ?targetMotifMatchRegionMatch385 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_03212387 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP00388MF_03212378 .
?targetMotifMatchRegionMatch385 faldo:begin ?targetMotifMatchRegionMatchBeginMF_03212386 .
?targetMotifMatchRegionMatchBeginMF_03212386 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_03212379 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_03212387 edam:has_input signature:MF_03212 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP00388MF_03212376, 1, (STRLEN(?templateMotifCigarP00388MF_03212376) - STRLEN(REPLACE(?templateMotifCigarP00388MF_03212376, CONCAT('^(?:-*[^-]){', STR(((677 - ?templateMotifSequenceMatchBeginPositionP00388377) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1388) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP00388MF_03212378, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212378) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1388), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP00388MF_03212378, 1, (STRLEN(?targetMotifMatchCigarP00388MF_03212378) - STRLEN(REPLACE(?targetMotifMatchCigarP00388MF_03212378, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1388), '}'), '')))), '[^-]', ''))) AS ?step2389) .
BIND(((?step2389 + ?targetMotifMatchRegionMatchBeginPositionMF_03212379) - 1) AS ?thisPositionOn122) .
BIND(?thisPositionOn122 AS ?thisPositionOn123) .
BIND(?this AS ?pfs1t390) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn122))) AS ?pfsb119) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfse120) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn122, 1) = 'W')) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a118')) AS ?annotation118) .
BIND(?this AS ?pfs117) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:4751 .
BIND(?this AS ?case8) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:7742 .
BIND(?this AS ?case9) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:4751 .
})) .
BIND(?this AS ?case10) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:147538 .
BIND(?this AS ?case11) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:4892 .
BIND(?this AS ?case12) .
}
OPTIONAL {
?this up:annotation ?samtransmembrane391 ;
up:sequence ?thisSequence .
?samtransmembrane391 up:range ?samtransmembraner392 ;
rdf:type up:Transmembrane_Annotation .
?samtransmembraner392 faldo:begin ?samtransmembraneb393 ;
faldo:end ?samtransmembranee394 .
?samtransmembraneb393 faldo:position ?samtransmembranebp395 ;
faldo:reference ?thisSequence .
?samtransmembranee394 faldo:position ?samtransmembraneep396 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam124) .
}
BIND(URI(CONCAT(STR(?this), '#MF_03212a130')) AS ?keyword130) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a131')) AS ?keyword131) .
BIND(URI(CONCAT(STR(?this), '#MF_03212a132')) AS ?keyword132) .
}
"xsd:string |
