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| Subject | Predicate | Object |
|---|---|---|
| http://purl.uniprot.org/unirules/MF_00221#construct | http://spinrdf.org/sp#templates | http://purl.uniprot.org/unirules/MF_00221#construct-template-list-0 |
| http://purl.uniprot.org/unirules/MF_00221#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:93858 up:source unirule:MF_00221 .
_:93859 up:source unirule:MF_00221 .
_:93860 up:source unirule:MF_00221 .
_:93861 up:source unirule:MF_00221 .
_:93862 up:source unirule:MF_00221 .
_:93863 up:source unirule:MF_00221 .
_:93864 up:source unirule:MF_00221 .
_:93865 up:source unirule:MF_00221 .
_:93866 up:source unirule:MF_00221 .
_:93867 up:source unirule:MF_00221 .
_:93868 up:source unirule:MF_00221 .
_:93869 up:source unirule:MF_00221 .
_:93870 up:source unirule:MF_00221 .
_:93871 up:source unirule:MF_00221 .
_:93872 up:source unirule:MF_00221 .
_:93873 up:source unirule:MF_00221 .
_:93874 up:source unirule:MF_00221 .
_:93875 up:source unirule:MF_00221 .
_:93876 up:source unirule:MF_00221 .
_:93877 up:source unirule:MF_00221 .
_:93878 up:source unirule:MF_00221 .
_:93879 up:source unirule:MF_00221 .
_:93880 up:source unirule:MF_00221 .
_:93881 up:source unirule:MF_00221 .
_:93882 up:source unirule:MF_00221 .
_:93883 up:source unirule:MF_00221 .
_:93884 up:source unirule:MF_00221 .
_:93885 up:source unirule:MF_00221 .
_:93886 up:source unirule:MF_00221 .
_:93887 up:source unirule:MF_00221 .
_:93888 up:source unirule:MF_00221 .
_:93889 up:source unirule:MF_00221 .
_:93890 up:source unirule:MF_00221 .
_:93891 up:source unirule:MF_00221 .
_:93892 up:source unirule:MF_00221 .
_:93893 up:source unirule:MF_00221 .
_:93894 up:source unirule:MF_00221 .
_:93895 up:source unirule:MF_00221 .
_:93896 up:source unirule:MF_00221 .
_:93897 up:source unirule:MF_00221 .
_:93898 up:source unirule:MF_00221 .
_:93899 up:source unirule:MF_00221 .
?this up:annotation ?annotation2 ,
?annotation3 ;
up:classifiedWith GO:0005886 ,
GO:0015293 ,
GO:0030001 ,
GO:0046872 ,
keyword:1003 ,
keyword:1133 ,
keyword:406 ,
keyword:472 ,
keyword:769 ,
keyword:812 ,
keyword:813 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Divalent metal cation transporter MntH' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'mntH' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'H(+)-stimulated, divalent metal cation uptake system.' .
?annotation3 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the NRAMP family.' .
?case4 up:classifiedWith keyword:997 .
?pfs6 up:annotation ?annotation7 .
?annotation7 faldo:begin ?pfsb8 ;
faldo:end ?pfse9 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb8 faldo:position ?thisPositionOn10 ;
rdf:type faldo:ExactPosition .
?pfse9 faldo:position ?thisPositionOn11 ;
rdf:type faldo:ExactPosition .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb14 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfs18 up:annotation ?annotation19 .
?annotation19 faldo:begin ?pfsb20 ;
faldo:end ?pfse21 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb20 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfse21 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?pfs24 up:annotation ?annotation25 .
?annotation25 faldo:begin ?pfsb26 ;
faldo:end ?pfse27 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb26 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?pfse27 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?pfs30 up:annotation ?annotation31 .
?annotation31 faldo:begin ?pfsb32 ;
faldo:end ?pfse33 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb32 faldo:position ?thisPositionOn34 ;
rdf:type faldo:ExactPosition .
?pfse33 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?pfs36 up:annotation ?annotation37 .
?annotation37 faldo:begin ?pfsb38 ;
faldo:end ?pfse39 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb38 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?pfse39 faldo:position ?thisPositionOn41 ;
rdf:type faldo:ExactPosition .
?pfs42 up:annotation ?annotation43 .
?annotation43 faldo:begin ?pfsb44 ;
faldo:end ?pfse45 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb44 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?pfse45 faldo:position ?thisPositionOn47 ;
rdf:type faldo:ExactPosition .
?pfs48 up:annotation ?annotation49 .
?annotation49 faldo:begin ?pfsb50 ;
faldo:end ?pfse51 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb50 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?pfse51 faldo:position ?thisPositionOn53 ;
rdf:type faldo:ExactPosition .
?pfs54 up:annotation ?annotation55 .
?annotation55 faldo:begin ?pfsb56 ;
faldo:end ?pfse57 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb56 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?pfse57 faldo:position ?thisPositionOn59 ;
rdf:type faldo:ExactPosition .
?pfs60 up:annotation ?annotation61 .
?annotation61 faldo:begin ?pfsb62 ;
faldo:end ?pfse63 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb62 faldo:position ?thisPositionOn64 ;
rdf:type faldo:ExactPosition .
?pfse63 faldo:position ?thisPositionOn65 ;
rdf:type faldo:ExactPosition .
?pfs66 up:annotation ?annotation67 .
?annotation67 faldo:begin ?pfsb68 ;
faldo:end ?pfse69 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb68 faldo:position ?thisPositionOn70 ;
rdf:type faldo:ExactPosition .
?pfse69 faldo:position ?thisPositionOn71 ;
rdf:type faldo:ExactPosition .
?pfs72 up:annotation ?annotation73 .
?annotation73 faldo:begin ?pfsb74 ;
faldo:end ?pfse75 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb74 faldo:position ?thisPositionOn76 ;
rdf:type faldo:ExactPosition .
?pfse75 faldo:position ?thisPositionOn77 ;
rdf:type faldo:ExactPosition .
?pfs78 up:annotation ?annotation79 .
?annotation79 faldo:begin ?pfsb80 ;
faldo:end ?pfse81 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb80 faldo:position ?thisPositionOn82 ;
rdf:type faldo:ExactPosition .
?pfse81 faldo:position ?thisPositionOn83 ;
rdf:type faldo:ExactPosition .
?pfs84 up:annotation ?annotation85 .
?annotation85 faldo:begin ?pfsb86 ;
faldo:end ?pfse87 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb86 faldo:position ?thisPositionOn88 ;
rdf:type faldo:ExactPosition .
?pfse87 faldo:position ?thisPositionOn89 ;
rdf:type faldo:ExactPosition .
?pfs90 up:annotation ?annotation91 .
?annotation91 faldo:begin ?pfsb92 ;
faldo:end ?pfse93 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb92 faldo:position ?thisPositionOn94 ;
rdf:type faldo:ExactPosition .
?pfse93 faldo:position ?thisPositionOn95 ;
rdf:type faldo:ExactPosition .
?pfs96 up:annotation ?annotation97 .
?annotation97 faldo:begin ?pfsb98 ;
faldo:end ?pfse99 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb98 faldo:position ?thisPositionOn100 ;
rdf:type faldo:ExactPosition .
?pfse99 faldo:position ?thisPositionOn101 ;
rdf:type faldo:ExactPosition .
?pfs102 up:annotation ?annotation103 .
?annotation103 faldo:begin ?pfsb104 ;
faldo:end ?pfse105 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb104 faldo:position ?thisPositionOn106 ;
rdf:type faldo:ExactPosition .
?pfse105 faldo:position ?thisPositionOn107 ;
rdf:type faldo:ExactPosition .
?pfs108 up:annotation ?annotation109 .
?annotation109 faldo:begin ?pfsb110 ;
faldo:end ?pfse111 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb110 faldo:position ?thisPositionOn112 ;
rdf:type faldo:ExactPosition .
?pfse111 faldo:position ?thisPositionOn113 ;
rdf:type faldo:ExactPosition .
?pfs114 up:annotation ?annotation115 .
?annotation115 faldo:begin ?pfsb116 ;
faldo:end ?pfse117 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb116 faldo:position ?thisPositionOn118 ;
rdf:type faldo:ExactPosition .
?pfse117 faldo:position ?thisPositionOn119 ;
rdf:type faldo:ExactPosition .
?pfs120 up:annotation ?annotation121 .
?annotation121 faldo:begin ?pfsb122 ;
faldo:end ?pfse123 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb122 faldo:position ?thisPositionOn124 ;
rdf:type faldo:ExactPosition .
?pfse123 faldo:position ?thisPositionOn125 ;
rdf:type faldo:ExactPosition .
?pfs126 up:annotation ?annotation127 .
?annotation127 faldo:begin ?pfsb128 ;
faldo:end ?pfse129 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb128 faldo:position ?thisPositionOn130 ;
rdf:type faldo:ExactPosition .
?pfse129 faldo:position ?thisPositionOn131 ;
rdf:type faldo:ExactPosition .
?pfs132 up:annotation ?annotation133 .
?annotation133 faldo:begin ?pfsb134 ;
faldo:end ?pfse135 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb134 faldo:position ?thisPositionOn136 ;
rdf:type faldo:ExactPosition .
?pfse135 faldo:position ?thisPositionOn137 ;
rdf:type faldo:ExactPosition .
?pfs138 up:annotation ?annotation139 .
?annotation139 faldo:begin ?pfsb140 ;
faldo:end ?pfse141 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb140 faldo:position ?thisPositionOn142 ;
rdf:type faldo:ExactPosition .
?pfse141 faldo:position ?thisPositionOn143 ;
rdf:type faldo:ExactPosition .
?sam144 up:classifiedWith keyword:1133 ,
keyword:472 ,
keyword:812 .
?transmembrane145 faldo:begin ?transmembraneb146 ;
faldo:end ?transmembranee147 .
?transmembraneb146 faldo:position ?transmembranebp148 .
?transmembranee147 faldo:position ?transmembraneep149 .
?keyword150 up:range ?transmembrane145 .
?keyword151 up:range ?transmembrane145 .
?keyword152 up:range ?transmembrane145 .
_:93900 a rdf:Statement ;
up:attribution _:93858 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:93901 a rdf:Statement ;
up:attribution _:93859 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:93902 a rdf:Statement ;
up:attribution _:93860 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:93903 a rdf:Statement ;
up:attribution _:93861 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:93904 a rdf:Statement ;
up:attribution _:93862 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:93905 a rdf:Statement ;
up:attribution _:93863 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:406 .
_:93906 a rdf:Statement ;
up:attribution _:93864 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:93907 a rdf:Statement ;
up:attribution _:93865 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:769 .
_:93908 a rdf:Statement ;
up:attribution _:93866 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:93909 a rdf:Statement ;
up:attribution _:93867 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:93910 a rdf:Statement ;
up:attribution _:93868 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:813 .
_:93911 a rdf:Statement ;
up:attribution _:93869 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0046872 .
_:93912 a rdf:Statement ;
up:attribution _:93870 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0015293 .
_:93913 a rdf:Statement ;
up:attribution _:93871 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0030001 .
_:93914 a rdf:Statement ;
up:attribution _:93872 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:93915 a rdf:Statement ;
up:attribution _:93873 ;
rdf:subject ?case4 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:93916 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:93917 a rdf:Statement ;
up:attribution _:93874 ;
rdf:subject ?pfs6 ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:93918 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:93919 a rdf:Statement ;
up:attribution _:93875 ;
rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:93920 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs18 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:93921 a rdf:Statement ;
up:attribution _:93876 ;
rdf:subject ?pfs18 ;
rdf:predicate up:annotation ;
rdf:object ?annotation19 .
_:93922 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs24 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:93923 a rdf:Statement ;
up:attribution _:93877 ;
rdf:subject ?pfs24 ;
rdf:predicate up:annotation ;
rdf:object ?annotation25 .
_:93924 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs30 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
_:93925 a rdf:Statement ;
up:attribution _:93878 ;
rdf:subject ?pfs30 ;
rdf:predicate up:annotation ;
rdf:object ?annotation31 .
_:93926 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs36 ;
rdf:predicate up:annotation ;
rdf:object ?annotation37 .
_:93927 a rdf:Statement ;
up:attribution _:93879 ;
rdf:subject ?pfs36 ;
rdf:predicate up:annotation ;
rdf:object ?annotation37 .
_:93928 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs42 ;
rdf:predicate up:annotation ;
rdf:object ?annotation43 .
_:93929 a rdf:Statement ;
up:attribution _:93880 ;
rdf:subject ?pfs42 ;
rdf:predicate up:annotation ;
rdf:object ?annotation43 .
_:93930 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs48 ;
rdf:predicate up:annotation ;
rdf:object ?annotation49 .
_:93931 a rdf:Statement ;
up:attribution _:93881 ;
rdf:subject ?pfs48 ;
rdf:predicate up:annotation ;
rdf:object ?annotation49 .
_:93932 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:93933 a rdf:Statement ;
up:attribution _:93882 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:93934 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs60 ;
rdf:predicate up:annotation ;
rdf:object ?annotation61 .
_:93935 a rdf:Statement ;
up:attribution _:93883 ;
rdf:subject ?pfs60 ;
rdf:predicate up:annotation ;
rdf:object ?annotation61 .
_:93936 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs66 ;
rdf:predicate up:annotation ;
rdf:object ?annotation67 .
_:93937 a rdf:Statement ;
up:attribution _:93884 ;
rdf:subject ?pfs66 ;
rdf:predicate up:annotation ;
rdf:object ?annotation67 .
_:93938 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs72 ;
rdf:predicate up:annotation ;
rdf:object ?annotation73 .
_:93939 a rdf:Statement ;
up:attribution _:93885 ;
rdf:subject ?pfs72 ;
rdf:predicate up:annotation ;
rdf:object ?annotation73 .
_:93940 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs78 ;
rdf:predicate up:annotation ;
rdf:object ?annotation79 .
_:93941 a rdf:Statement ;
up:attribution _:93886 ;
rdf:subject ?pfs78 ;
rdf:predicate up:annotation ;
rdf:object ?annotation79 .
_:93942 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs84 ;
rdf:predicate up:annotation ;
rdf:object ?annotation85 .
_:93943 a rdf:Statement ;
up:attribution _:93887 ;
rdf:subject ?pfs84 ;
rdf:predicate up:annotation ;
rdf:object ?annotation85 .
_:93944 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation91 .
_:93945 a rdf:Statement ;
up:attribution _:93888 ;
rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation91 .
_:93946 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs96 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:93947 a rdf:Statement ;
up:attribution _:93889 ;
rdf:subject ?pfs96 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:93948 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs102 ;
rdf:predicate up:annotation ;
rdf:object ?annotation103 .
_:93949 a rdf:Statement ;
up:attribution _:93890 ;
rdf:subject ?pfs102 ;
rdf:predicate up:annotation ;
rdf:object ?annotation103 .
_:93950 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
_:93951 a rdf:Statement ;
up:attribution _:93891 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
_:93952 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs114 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
_:93953 a rdf:Statement ;
up:attribution _:93892 ;
rdf:subject ?pfs114 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
_:93954 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs120 ;
rdf:predicate up:annotation ;
rdf:object ?annotation121 .
_:93955 a rdf:Statement ;
up:attribution _:93893 ;
rdf:subject ?pfs120 ;
rdf:predicate up:annotation ;
rdf:object ?annotation121 .
_:93956 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs126 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:93957 a rdf:Statement ;
up:attribution _:93894 ;
rdf:subject ?pfs126 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:93958 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs132 ;
rdf:predicate up:annotation ;
rdf:object ?annotation133 .
_:93959 a rdf:Statement ;
up:attribution _:93895 ;
rdf:subject ?pfs132 ;
rdf:predicate up:annotation ;
rdf:object ?annotation133 .
_:93960 a rdf:Statement ;
up:source unirule:MF_00221 ;
rdf:subject ?pfs138 ;
rdf:predicate up:annotation ;
rdf:object ?annotation139 .
_:93961 a rdf:Statement ;
up:attribution _:93896 ;
rdf:subject ?pfs138 ;
rdf:predicate up:annotation ;
rdf:object ?annotation139 .
_:93962 a rdf:Statement ;
up:attribution _:93897 ;
rdf:subject ?sam144 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:93963 a rdf:Statement ;
up:attribution _:93898 ;
rdf:subject ?sam144 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:93964 a rdf:Statement ;
up:attribution _:93899 ;
rdf:subject ?sam144 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00221
#Rule MF_00221 Created by:? on:2005-02-28 Modified by:Edouard de Castro on:2023-11-28
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00221 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00221a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a3')) AS ?annotation3) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch158 faldo:location ?templateMotifSequenceMatchRegionP0A769159 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769161 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221154 .
?templateMotifSequenceMatchRegionP0A769159 faldo:begin ?templateMotifSequenceMatchBeginP0A769160 .
?templateMotifSequenceMatchBeginP0A769160 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769155 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769161 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch162 faldo:location ?targetMotifMatchRegionMatch163 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221165 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221156 .
?targetMotifMatchRegionMatch163 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221164 .
?targetMotifMatchRegionMatchBeginMF_00221164 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221157 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221165 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon153 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon153 .
BIND(1 AS ?thisPositionOn10) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221154, 1, (STRLEN(?templateMotifCigarP0A769MF_00221154) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221154, CONCAT('^(?:-*[^-]){', STR(((19 - ?templateMotifSequenceMatchBeginPositionP0A769155) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1166) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221156, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1166), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221156, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221156) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221156, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1166), '}'), '')))), '[^-]', ''))) AS ?step2167) .
BIND(((?step2167 + ?targetMotifMatchRegionMatchBeginPositionMF_00221157) - 1) AS ?thisPositionOn11) .
BIND(?this AS ?pfs1t168) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn10))) AS ?pfsb8) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn11))) AS ?pfse9) .
FILTER ((BOUND(?thisPositionOn10) && BOUND(?thisPositionOn11))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a7')) AS ?annotation7) .
BIND(?this AS ?pfs6) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch174 faldo:location ?templateMotifSequenceMatchRegionP0A769175 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769177 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221170 .
?templateMotifSequenceMatchRegionP0A769175 faldo:begin ?templateMotifSequenceMatchBeginP0A769176 .
?templateMotifSequenceMatchBeginP0A769176 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769171 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769177 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch178 faldo:location ?targetMotifMatchRegionMatch179 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221181 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221172 .
?targetMotifMatchRegionMatch179 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221180 .
?targetMotifMatchRegionMatchBeginMF_00221180 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221173 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221181 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon169 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon169 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221170, 1, (STRLEN(?templateMotifCigarP0A769MF_00221170) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221170, CONCAT('^(?:-*[^-]){', STR(((20 - ?templateMotifSequenceMatchBeginPositionP0A769171) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1182) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221172, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221172) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221172, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221172, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221172) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221172, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), '')))), '[^-]', ''))) AS ?step2183) .
BIND(((?step2183 + ?targetMotifMatchRegionMatchBeginPositionMF_00221173) - 1) AS ?thisPositionOn16) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221170, 1, (STRLEN(?templateMotifCigarP0A769MF_00221170) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221170, CONCAT('^(?:-*[^-]){', STR(((39 - ?templateMotifSequenceMatchBeginPositionP0A769171) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1184) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221172, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221172) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221172, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221172, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221172) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221172, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1184), '}'), '')))), '[^-]', ''))) AS ?step2185) .
BIND(((?step2185 + ?targetMotifMatchRegionMatchBeginPositionMF_00221173) - 1) AS ?thisPositionOn17) .
BIND(?this AS ?pfs1t186) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse15) .
FILTER ((BOUND(?thisPositionOn16) && BOUND(?thisPositionOn17))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch192 faldo:location ?templateMotifSequenceMatchRegionP0A769193 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769195 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221188 .
?templateMotifSequenceMatchRegionP0A769193 faldo:begin ?templateMotifSequenceMatchBeginP0A769194 .
?templateMotifSequenceMatchBeginP0A769194 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769189 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769195 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch196 faldo:location ?targetMotifMatchRegionMatch197 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221199 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221190 .
?targetMotifMatchRegionMatch197 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221198 .
?targetMotifMatchRegionMatchBeginMF_00221198 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221191 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221199 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon187 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon187 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221188, 1, (STRLEN(?templateMotifCigarP0A769MF_00221188) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221188, CONCAT('^(?:-*[^-]){', STR(((40 - ?templateMotifSequenceMatchBeginPositionP0A769189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1200) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221190, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221190, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), '')))), '[^-]', ''))) AS ?step2201) .
BIND(((?step2201 + ?targetMotifMatchRegionMatchBeginPositionMF_00221191) - 1) AS ?thisPositionOn22) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221188, 1, (STRLEN(?templateMotifCigarP0A769MF_00221188) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221188, CONCAT('^(?:-*[^-]){', STR(((51 - ?templateMotifSequenceMatchBeginPositionP0A769189) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1202) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221190, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221190, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221190) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221190, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1202), '}'), '')))), '[^-]', ''))) AS ?step2203) .
BIND(((?step2203 + ?targetMotifMatchRegionMatchBeginPositionMF_00221191) - 1) AS ?thisPositionOn23) .
BIND(?this AS ?pfs1t204) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb20) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse21) .
FILTER ((BOUND(?thisPositionOn22) && BOUND(?thisPositionOn23))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a19')) AS ?annotation19) .
BIND(?this AS ?pfs18) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch210 faldo:location ?templateMotifSequenceMatchRegionP0A769211 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769213 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221206 .
?templateMotifSequenceMatchRegionP0A769211 faldo:begin ?templateMotifSequenceMatchBeginP0A769212 .
?templateMotifSequenceMatchBeginP0A769212 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769207 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769213 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch214 faldo:location ?targetMotifMatchRegionMatch215 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221217 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221208 .
?targetMotifMatchRegionMatch215 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221216 .
?targetMotifMatchRegionMatchBeginMF_00221216 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221209 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221217 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon205 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon205 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221206, 1, (STRLEN(?templateMotifCigarP0A769MF_00221206) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221206, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionP0A769207) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1218) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221208, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221208) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221208, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221208) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1218), '}'), '')))), '[^-]', ''))) AS ?step2219) .
BIND(((?step2219 + ?targetMotifMatchRegionMatchBeginPositionMF_00221209) - 1) AS ?thisPositionOn28) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221206, 1, (STRLEN(?templateMotifCigarP0A769MF_00221206) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221206, CONCAT('^(?:-*[^-]){', STR(((71 - ?templateMotifSequenceMatchBeginPositionP0A769207) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1220) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221208, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221208) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1220), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221208, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221208) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221208, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1220), '}'), '')))), '[^-]', ''))) AS ?step2221) .
BIND(((?step2221 + ?targetMotifMatchRegionMatchBeginPositionMF_00221209) - 1) AS ?thisPositionOn29) .
BIND(?this AS ?pfs1t222) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb26) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse27) .
FILTER ((BOUND(?thisPositionOn28) && BOUND(?thisPositionOn29))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a25')) AS ?annotation25) .
BIND(?this AS ?pfs24) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch228 faldo:location ?templateMotifSequenceMatchRegionP0A769229 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769231 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221224 .
?templateMotifSequenceMatchRegionP0A769229 faldo:begin ?templateMotifSequenceMatchBeginP0A769230 .
?templateMotifSequenceMatchBeginP0A769230 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769225 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769231 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch232 faldo:location ?targetMotifMatchRegionMatch233 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221235 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221226 .
?targetMotifMatchRegionMatch233 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221234 .
?targetMotifMatchRegionMatchBeginMF_00221234 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221227 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221235 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon223 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon223 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221224, 1, (STRLEN(?templateMotifCigarP0A769MF_00221224) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221224, CONCAT('^(?:-*[^-]){', STR(((72 - ?templateMotifSequenceMatchBeginPositionP0A769225) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221226, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221226) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221226, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221226) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) .
BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_00221227) - 1) AS ?thisPositionOn34) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221224, 1, (STRLEN(?templateMotifCigarP0A769MF_00221224) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221224, CONCAT('^(?:-*[^-]){', STR(((95 - ?templateMotifSequenceMatchBeginPositionP0A769225) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1238) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221226, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221226) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1238), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221226, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221226) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221226, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1238), '}'), '')))), '[^-]', ''))) AS ?step2239) .
BIND(((?step2239 + ?targetMotifMatchRegionMatchBeginPositionMF_00221227) - 1) AS ?thisPositionOn35) .
BIND(?this AS ?pfs1t240) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb32) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse33) .
FILTER ((BOUND(?thisPositionOn34) && BOUND(?thisPositionOn35))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a31')) AS ?annotation31) .
BIND(?this AS ?pfs30) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch246 faldo:location ?templateMotifSequenceMatchRegionP0A769247 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769249 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221242 .
?templateMotifSequenceMatchRegionP0A769247 faldo:begin ?templateMotifSequenceMatchBeginP0A769248 .
?templateMotifSequenceMatchBeginP0A769248 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769243 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769249 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch250 faldo:location ?targetMotifMatchRegionMatch251 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221253 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221244 .
?targetMotifMatchRegionMatch251 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221252 .
?targetMotifMatchRegionMatchBeginMF_00221252 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221245 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221253 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon241 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon241 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221242, 1, (STRLEN(?templateMotifCigarP0A769MF_00221242) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221242, CONCAT('^(?:-*[^-]){', STR(((96 - ?templateMotifSequenceMatchBeginPositionP0A769243) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1254) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221244, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221244) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1254), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221244, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221244) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1254), '}'), '')))), '[^-]', ''))) AS ?step2255) .
BIND(((?step2255 + ?targetMotifMatchRegionMatchBeginPositionMF_00221245) - 1) AS ?thisPositionOn40) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221242, 1, (STRLEN(?templateMotifCigarP0A769MF_00221242) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221242, CONCAT('^(?:-*[^-]){', STR(((118 - ?templateMotifSequenceMatchBeginPositionP0A769243) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1256) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221244, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221244) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221244, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221244) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221244, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1256), '}'), '')))), '[^-]', ''))) AS ?step2257) .
BIND(((?step2257 + ?targetMotifMatchRegionMatchBeginPositionMF_00221245) - 1) AS ?thisPositionOn41) .
BIND(?this AS ?pfs1t258) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb38) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse39) .
FILTER ((BOUND(?thisPositionOn40) && BOUND(?thisPositionOn41))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a37')) AS ?annotation37) .
BIND(?this AS ?pfs36) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch264 faldo:location ?templateMotifSequenceMatchRegionP0A769265 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769267 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221260 .
?templateMotifSequenceMatchRegionP0A769265 faldo:begin ?templateMotifSequenceMatchBeginP0A769266 .
?templateMotifSequenceMatchBeginP0A769266 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769261 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769267 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch268 faldo:location ?targetMotifMatchRegionMatch269 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221271 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221262 .
?targetMotifMatchRegionMatch269 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221270 .
?targetMotifMatchRegionMatchBeginMF_00221270 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221263 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221271 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon259 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon259 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221260, 1, (STRLEN(?templateMotifCigarP0A769MF_00221260) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221260, CONCAT('^(?:-*[^-]){', STR(((119 - ?templateMotifSequenceMatchBeginPositionP0A769261) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1272) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221262, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221262) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221262, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221262) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), '')))), '[^-]', ''))) AS ?step2273) .
BIND(((?step2273 + ?targetMotifMatchRegionMatchBeginPositionMF_00221263) - 1) AS ?thisPositionOn46) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221260, 1, (STRLEN(?templateMotifCigarP0A769MF_00221260) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221260, CONCAT('^(?:-*[^-]){', STR(((125 - ?templateMotifSequenceMatchBeginPositionP0A769261) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1274) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221262, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221262) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1274), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221262, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221262) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1274), '}'), '')))), '[^-]', ''))) AS ?step2275) .
BIND(((?step2275 + ?targetMotifMatchRegionMatchBeginPositionMF_00221263) - 1) AS ?thisPositionOn47) .
BIND(?this AS ?pfs1t276) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfsb44) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfse45) .
FILTER ((BOUND(?thisPositionOn46) && BOUND(?thisPositionOn47))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a43')) AS ?annotation43) .
BIND(?this AS ?pfs42) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch282 faldo:location ?templateMotifSequenceMatchRegionP0A769283 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769285 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221278 .
?templateMotifSequenceMatchRegionP0A769283 faldo:begin ?templateMotifSequenceMatchBeginP0A769284 .
?templateMotifSequenceMatchBeginP0A769284 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769279 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769285 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch286 faldo:location ?targetMotifMatchRegionMatch287 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221289 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221280 .
?targetMotifMatchRegionMatch287 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221288 .
?targetMotifMatchRegionMatchBeginMF_00221288 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221281 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221289 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon277 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon277 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221278, 1, (STRLEN(?templateMotifCigarP0A769MF_00221278) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221278, CONCAT('^(?:-*[^-]){', STR(((126 - ?templateMotifSequenceMatchBeginPositionP0A769279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1290) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221280, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221280) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221280, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221280) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), '')))), '[^-]', ''))) AS ?step2291) .
BIND(((?step2291 + ?targetMotifMatchRegionMatchBeginPositionMF_00221281) - 1) AS ?thisPositionOn52) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221278, 1, (STRLEN(?templateMotifCigarP0A769MF_00221278) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221278, CONCAT('^(?:-*[^-]){', STR(((145 - ?templateMotifSequenceMatchBeginPositionP0A769279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1292) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221280, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221280) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221280, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221280) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), '')))), '[^-]', ''))) AS ?step2293) .
BIND(((?step2293 + ?targetMotifMatchRegionMatchBeginPositionMF_00221281) - 1) AS ?thisPositionOn53) .
BIND(?this AS ?pfs1t294) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb50) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse51) .
FILTER ((BOUND(?thisPositionOn52) && BOUND(?thisPositionOn53))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a49')) AS ?annotation49) .
BIND(?this AS ?pfs48) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch300 faldo:location ?templateMotifSequenceMatchRegionP0A769301 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769303 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221296 .
?templateMotifSequenceMatchRegionP0A769301 faldo:begin ?templateMotifSequenceMatchBeginP0A769302 .
?templateMotifSequenceMatchBeginP0A769302 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769297 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769303 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch304 faldo:location ?targetMotifMatchRegionMatch305 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221307 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221298 .
?targetMotifMatchRegionMatch305 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221306 .
?targetMotifMatchRegionMatchBeginMF_00221306 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221299 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221307 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon295 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon295 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221296, 1, (STRLEN(?templateMotifCigarP0A769MF_00221296) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221296, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionP0A769297) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1308) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221298, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221298) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221298, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1308), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221298, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221298) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221298, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1308), '}'), '')))), '[^-]', ''))) AS ?step2309) .
BIND(((?step2309 + ?targetMotifMatchRegionMatchBeginPositionMF_00221299) - 1) AS ?thisPositionOn58) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221296, 1, (STRLEN(?templateMotifCigarP0A769MF_00221296) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221296, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionP0A769297) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1310) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221298, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221298) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221298, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221298, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221298) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221298, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1310), '}'), '')))), '[^-]', ''))) AS ?step2311) .
BIND(((?step2311 + ?targetMotifMatchRegionMatchBeginPositionMF_00221299) - 1) AS ?thisPositionOn59) .
BIND(?this AS ?pfs1t312) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfsb56) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfse57) .
FILTER ((BOUND(?thisPositionOn58) && BOUND(?thisPositionOn59))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a55')) AS ?annotation55) .
BIND(?this AS ?pfs54) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch318 faldo:location ?templateMotifSequenceMatchRegionP0A769319 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769321 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221314 .
?templateMotifSequenceMatchRegionP0A769319 faldo:begin ?templateMotifSequenceMatchBeginP0A769320 .
?templateMotifSequenceMatchBeginP0A769320 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769315 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769321 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch322 faldo:location ?targetMotifMatchRegionMatch323 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221325 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221316 .
?targetMotifMatchRegionMatch323 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221324 .
?targetMotifMatchRegionMatchBeginMF_00221324 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221317 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221325 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon313 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon313 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221314, 1, (STRLEN(?templateMotifCigarP0A769MF_00221314) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221314, CONCAT('^(?:-*[^-]){', STR(((156 - ?templateMotifSequenceMatchBeginPositionP0A769315) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1326) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221316, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221316) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1326), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221316, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221316) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1326), '}'), '')))), '[^-]', ''))) AS ?step2327) .
BIND(((?step2327 + ?targetMotifMatchRegionMatchBeginPositionMF_00221317) - 1) AS ?thisPositionOn64) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221314, 1, (STRLEN(?templateMotifCigarP0A769MF_00221314) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221314, CONCAT('^(?:-*[^-]){', STR(((175 - ?templateMotifSequenceMatchBeginPositionP0A769315) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1328) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221316, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221316) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1328), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221316, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221316) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221316, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1328), '}'), '')))), '[^-]', ''))) AS ?step2329) .
BIND(((?step2329 + ?targetMotifMatchRegionMatchBeginPositionMF_00221317) - 1) AS ?thisPositionOn65) .
BIND(?this AS ?pfs1t330) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfsb62) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn65))) AS ?pfse63) .
FILTER ((BOUND(?thisPositionOn64) && BOUND(?thisPositionOn65))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a61')) AS ?annotation61) .
BIND(?this AS ?pfs60) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch336 faldo:location ?templateMotifSequenceMatchRegionP0A769337 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769339 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221332 .
?templateMotifSequenceMatchRegionP0A769337 faldo:begin ?templateMotifSequenceMatchBeginP0A769338 .
?templateMotifSequenceMatchBeginP0A769338 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769333 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769339 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch340 faldo:location ?targetMotifMatchRegionMatch341 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221343 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221334 .
?targetMotifMatchRegionMatch341 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221342 .
?targetMotifMatchRegionMatchBeginMF_00221342 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221335 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221343 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon331 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon331 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221332, 1, (STRLEN(?templateMotifCigarP0A769MF_00221332) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221332, CONCAT('^(?:-*[^-]){', STR(((176 - ?templateMotifSequenceMatchBeginPositionP0A769333) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1344) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221334, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221334) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221334, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1344), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221334, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221334) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221334, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1344), '}'), '')))), '[^-]', ''))) AS ?step2345) .
BIND(((?step2345 + ?targetMotifMatchRegionMatchBeginPositionMF_00221335) - 1) AS ?thisPositionOn70) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221332, 1, (STRLEN(?templateMotifCigarP0A769MF_00221332) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221332, CONCAT('^(?:-*[^-]){', STR(((196 - ?templateMotifSequenceMatchBeginPositionP0A769333) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1346) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221334, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221334) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221334, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1346), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221334, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221334) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221334, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1346), '}'), '')))), '[^-]', ''))) AS ?step2347) .
BIND(((?step2347 + ?targetMotifMatchRegionMatchBeginPositionMF_00221335) - 1) AS ?thisPositionOn71) .
BIND(?this AS ?pfs1t348) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb68) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse69) .
FILTER ((BOUND(?thisPositionOn70) && BOUND(?thisPositionOn71))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a67')) AS ?annotation67) .
BIND(?this AS ?pfs66) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch354 faldo:location ?templateMotifSequenceMatchRegionP0A769355 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769357 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221350 .
?templateMotifSequenceMatchRegionP0A769355 faldo:begin ?templateMotifSequenceMatchBeginP0A769356 .
?templateMotifSequenceMatchBeginP0A769356 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769351 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769357 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch358 faldo:location ?targetMotifMatchRegionMatch359 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221361 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221352 .
?targetMotifMatchRegionMatch359 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221360 .
?targetMotifMatchRegionMatchBeginMF_00221360 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221353 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221361 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon349 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon349 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221350, 1, (STRLEN(?templateMotifCigarP0A769MF_00221350) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221350, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP0A769351) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1362) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221352, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221352) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1362), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221352, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221352) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1362), '}'), '')))), '[^-]', ''))) AS ?step2363) .
BIND(((?step2363 + ?targetMotifMatchRegionMatchBeginPositionMF_00221353) - 1) AS ?thisPositionOn76) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221350, 1, (STRLEN(?templateMotifCigarP0A769MF_00221350) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221350, CONCAT('^(?:-*[^-]){', STR(((220 - ?templateMotifSequenceMatchBeginPositionP0A769351) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1364) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221352, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221352) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1364), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221352, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221352) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221352, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1364), '}'), '')))), '[^-]', ''))) AS ?step2365) .
BIND(((?step2365 + ?targetMotifMatchRegionMatchBeginPositionMF_00221353) - 1) AS ?thisPositionOn77) .
BIND(?this AS ?pfs1t366) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb74) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse75) .
FILTER ((BOUND(?thisPositionOn76) && BOUND(?thisPositionOn77))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a73')) AS ?annotation73) .
BIND(?this AS ?pfs72) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch372 faldo:location ?templateMotifSequenceMatchRegionP0A769373 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769375 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221368 .
?templateMotifSequenceMatchRegionP0A769373 faldo:begin ?templateMotifSequenceMatchBeginP0A769374 .
?templateMotifSequenceMatchBeginP0A769374 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769369 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769375 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch376 faldo:location ?targetMotifMatchRegionMatch377 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221379 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221370 .
?targetMotifMatchRegionMatch377 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221378 .
?targetMotifMatchRegionMatchBeginMF_00221378 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221371 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221379 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon367 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon367 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221368, 1, (STRLEN(?templateMotifCigarP0A769MF_00221368) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221368, CONCAT('^(?:-*[^-]){', STR(((221 - ?templateMotifSequenceMatchBeginPositionP0A769369) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1380) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221370, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221370) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1380), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221370, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221370) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1380), '}'), '')))), '[^-]', ''))) AS ?step2381) .
BIND(((?step2381 + ?targetMotifMatchRegionMatchBeginPositionMF_00221371) - 1) AS ?thisPositionOn82) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221368, 1, (STRLEN(?templateMotifCigarP0A769MF_00221368) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221368, CONCAT('^(?:-*[^-]){', STR(((238 - ?templateMotifSequenceMatchBeginPositionP0A769369) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1382) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221370, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221370) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1382), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221370, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221370) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1382), '}'), '')))), '[^-]', ''))) AS ?step2383) .
BIND(((?step2383 + ?targetMotifMatchRegionMatchBeginPositionMF_00221371) - 1) AS ?thisPositionOn83) .
BIND(?this AS ?pfs1t384) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb80) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse81) .
FILTER ((BOUND(?thisPositionOn82) && BOUND(?thisPositionOn83))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a79')) AS ?annotation79) .
BIND(?this AS ?pfs78) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch390 faldo:location ?templateMotifSequenceMatchRegionP0A769391 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769393 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221386 .
?templateMotifSequenceMatchRegionP0A769391 faldo:begin ?templateMotifSequenceMatchBeginP0A769392 .
?templateMotifSequenceMatchBeginP0A769392 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769387 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769393 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch394 faldo:location ?targetMotifMatchRegionMatch395 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221397 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221388 .
?targetMotifMatchRegionMatch395 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221396 .
?targetMotifMatchRegionMatchBeginMF_00221396 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221389 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221397 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon385 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon385 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221386, 1, (STRLEN(?templateMotifCigarP0A769MF_00221386) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221386, CONCAT('^(?:-*[^-]){', STR(((239 - ?templateMotifSequenceMatchBeginPositionP0A769387) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1398) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221388, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221388) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221388, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1398), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221388, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221388) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221388, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1398), '}'), '')))), '[^-]', ''))) AS ?step2399) .
BIND(((?step2399 + ?targetMotifMatchRegionMatchBeginPositionMF_00221389) - 1) AS ?thisPositionOn88) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221386, 1, (STRLEN(?templateMotifCigarP0A769MF_00221386) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221386, CONCAT('^(?:-*[^-]){', STR(((258 - ?templateMotifSequenceMatchBeginPositionP0A769387) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1400) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221388, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221388) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221388, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1400), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221388, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221388) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221388, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1400), '}'), '')))), '[^-]', ''))) AS ?step2401) .
BIND(((?step2401 + ?targetMotifMatchRegionMatchBeginPositionMF_00221389) - 1) AS ?thisPositionOn89) .
BIND(?this AS ?pfs1t402) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb86) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse87) .
FILTER ((BOUND(?thisPositionOn88) && BOUND(?thisPositionOn89))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a85')) AS ?annotation85) .
BIND(?this AS ?pfs84) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch408 faldo:location ?templateMotifSequenceMatchRegionP0A769409 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769411 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221404 .
?templateMotifSequenceMatchRegionP0A769409 faldo:begin ?templateMotifSequenceMatchBeginP0A769410 .
?templateMotifSequenceMatchBeginP0A769410 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769405 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769411 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch412 faldo:location ?targetMotifMatchRegionMatch413 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221415 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221406 .
?targetMotifMatchRegionMatch413 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221414 .
?targetMotifMatchRegionMatchBeginMF_00221414 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221407 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221415 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon403 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon403 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221404, 1, (STRLEN(?templateMotifCigarP0A769MF_00221404) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221404, CONCAT('^(?:-*[^-]){', STR(((259 - ?templateMotifSequenceMatchBeginPositionP0A769405) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1416) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221406, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221406) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221406, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1416), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221406, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221406) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221406, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1416), '}'), '')))), '[^-]', ''))) AS ?step2417) .
BIND(((?step2417 + ?targetMotifMatchRegionMatchBeginPositionMF_00221407) - 1) AS ?thisPositionOn94) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221404, 1, (STRLEN(?templateMotifCigarP0A769MF_00221404) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221404, CONCAT('^(?:-*[^-]){', STR(((276 - ?templateMotifSequenceMatchBeginPositionP0A769405) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1418) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221406, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221406) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221406, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1418), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221406, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221406) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221406, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1418), '}'), '')))), '[^-]', ''))) AS ?step2419) .
BIND(((?step2419 + ?targetMotifMatchRegionMatchBeginPositionMF_00221407) - 1) AS ?thisPositionOn95) .
BIND(?this AS ?pfs1t420) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb92) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse93) .
FILTER ((BOUND(?thisPositionOn94) && BOUND(?thisPositionOn95))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a91')) AS ?annotation91) .
BIND(?this AS ?pfs90) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch426 faldo:location ?templateMotifSequenceMatchRegionP0A769427 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769429 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221422 .
?templateMotifSequenceMatchRegionP0A769427 faldo:begin ?templateMotifSequenceMatchBeginP0A769428 .
?templateMotifSequenceMatchBeginP0A769428 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769423 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769429 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch430 faldo:location ?targetMotifMatchRegionMatch431 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221433 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221424 .
?targetMotifMatchRegionMatch431 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221432 .
?targetMotifMatchRegionMatchBeginMF_00221432 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221425 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221433 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon421 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon421 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221422, 1, (STRLEN(?templateMotifCigarP0A769MF_00221422) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221422, CONCAT('^(?:-*[^-]){', STR(((277 - ?templateMotifSequenceMatchBeginPositionP0A769423) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1434) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221424, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221424) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221424, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1434), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221424, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221424) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221424, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1434), '}'), '')))), '[^-]', ''))) AS ?step2435) .
BIND(((?step2435 + ?targetMotifMatchRegionMatchBeginPositionMF_00221425) - 1) AS ?thisPositionOn100) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221422, 1, (STRLEN(?templateMotifCigarP0A769MF_00221422) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221422, CONCAT('^(?:-*[^-]){', STR(((297 - ?templateMotifSequenceMatchBeginPositionP0A769423) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1436) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221424, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221424) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221424, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1436), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221424, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221424) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221424, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1436), '}'), '')))), '[^-]', ''))) AS ?step2437) .
BIND(((?step2437 + ?targetMotifMatchRegionMatchBeginPositionMF_00221425) - 1) AS ?thisPositionOn101) .
BIND(?this AS ?pfs1t438) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfsb98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfse99) .
FILTER ((BOUND(?thisPositionOn100) && BOUND(?thisPositionOn101))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a97')) AS ?annotation97) .
BIND(?this AS ?pfs96) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch444 faldo:location ?templateMotifSequenceMatchRegionP0A769445 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769447 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221440 .
?templateMotifSequenceMatchRegionP0A769445 faldo:begin ?templateMotifSequenceMatchBeginP0A769446 .
?templateMotifSequenceMatchBeginP0A769446 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769441 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769447 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch448 faldo:location ?targetMotifMatchRegionMatch449 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221451 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221442 .
?targetMotifMatchRegionMatch449 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221450 .
?targetMotifMatchRegionMatchBeginMF_00221450 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221443 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221451 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon439 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon439 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221440, 1, (STRLEN(?templateMotifCigarP0A769MF_00221440) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221440, CONCAT('^(?:-*[^-]){', STR(((298 - ?templateMotifSequenceMatchBeginPositionP0A769441) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1452) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221442, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221442) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221442, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1452), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221442, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221442) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221442, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1452), '}'), '')))), '[^-]', ''))) AS ?step2453) .
BIND(((?step2453 + ?targetMotifMatchRegionMatchBeginPositionMF_00221443) - 1) AS ?thisPositionOn106) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221440, 1, (STRLEN(?templateMotifCigarP0A769MF_00221440) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221440, CONCAT('^(?:-*[^-]){', STR(((327 - ?templateMotifSequenceMatchBeginPositionP0A769441) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1454) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221442, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221442) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221442, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1454), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221442, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221442) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221442, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1454), '}'), '')))), '[^-]', ''))) AS ?step2455) .
BIND(((?step2455 + ?targetMotifMatchRegionMatchBeginPositionMF_00221443) - 1) AS ?thisPositionOn107) .
BIND(?this AS ?pfs1t456) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfsb104) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfse105) .
FILTER ((BOUND(?thisPositionOn106) && BOUND(?thisPositionOn107))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a103')) AS ?annotation103) .
BIND(?this AS ?pfs102) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch462 faldo:location ?templateMotifSequenceMatchRegionP0A769463 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769465 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221458 .
?templateMotifSequenceMatchRegionP0A769463 faldo:begin ?templateMotifSequenceMatchBeginP0A769464 .
?templateMotifSequenceMatchBeginP0A769464 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769459 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769465 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch466 faldo:location ?targetMotifMatchRegionMatch467 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221469 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221460 .
?targetMotifMatchRegionMatch467 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221468 .
?targetMotifMatchRegionMatchBeginMF_00221468 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221461 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221469 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon457 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon457 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221458, 1, (STRLEN(?templateMotifCigarP0A769MF_00221458) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221458, CONCAT('^(?:-*[^-]){', STR(((328 - ?templateMotifSequenceMatchBeginPositionP0A769459) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1470) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221460, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221460) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221460, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221460) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), '')))), '[^-]', ''))) AS ?step2471) .
BIND(((?step2471 + ?targetMotifMatchRegionMatchBeginPositionMF_00221461) - 1) AS ?thisPositionOn112) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221458, 1, (STRLEN(?templateMotifCigarP0A769MF_00221458) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221458, CONCAT('^(?:-*[^-]){', STR(((344 - ?templateMotifSequenceMatchBeginPositionP0A769459) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1472) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221460, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221460) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1472), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221460, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221460) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1472), '}'), '')))), '[^-]', ''))) AS ?step2473) .
BIND(((?step2473 + ?targetMotifMatchRegionMatchBeginPositionMF_00221461) - 1) AS ?thisPositionOn113) .
BIND(?this AS ?pfs1t474) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb110) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse111) .
FILTER ((BOUND(?thisPositionOn112) && BOUND(?thisPositionOn113))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a109')) AS ?annotation109) .
BIND(?this AS ?pfs108) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch480 faldo:location ?templateMotifSequenceMatchRegionP0A769481 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769483 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221476 .
?templateMotifSequenceMatchRegionP0A769481 faldo:begin ?templateMotifSequenceMatchBeginP0A769482 .
?templateMotifSequenceMatchBeginP0A769482 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769477 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769483 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch484 faldo:location ?targetMotifMatchRegionMatch485 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221487 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221478 .
?targetMotifMatchRegionMatch485 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221486 .
?targetMotifMatchRegionMatchBeginMF_00221486 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221479 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221487 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon475 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon475 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221476, 1, (STRLEN(?templateMotifCigarP0A769MF_00221476) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221476, CONCAT('^(?:-*[^-]){', STR(((345 - ?templateMotifSequenceMatchBeginPositionP0A769477) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1488) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221478, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221478) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221478, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1488), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221478, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221478) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221478, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1488), '}'), '')))), '[^-]', ''))) AS ?step2489) .
BIND(((?step2489 + ?targetMotifMatchRegionMatchBeginPositionMF_00221479) - 1) AS ?thisPositionOn118) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221476, 1, (STRLEN(?templateMotifCigarP0A769MF_00221476) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221476, CONCAT('^(?:-*[^-]){', STR(((350 - ?templateMotifSequenceMatchBeginPositionP0A769477) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1490) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221478, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221478) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221478, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1490), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221478, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221478) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221478, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1490), '}'), '')))), '[^-]', ''))) AS ?step2491) .
BIND(((?step2491 + ?targetMotifMatchRegionMatchBeginPositionMF_00221479) - 1) AS ?thisPositionOn119) .
BIND(?this AS ?pfs1t492) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfsb116) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfse117) .
FILTER ((BOUND(?thisPositionOn118) && BOUND(?thisPositionOn119))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a115')) AS ?annotation115) .
BIND(?this AS ?pfs114) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch498 faldo:location ?templateMotifSequenceMatchRegionP0A769499 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769501 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221494 .
?templateMotifSequenceMatchRegionP0A769499 faldo:begin ?templateMotifSequenceMatchBeginP0A769500 .
?templateMotifSequenceMatchBeginP0A769500 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769495 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769501 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch502 faldo:location ?targetMotifMatchRegionMatch503 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221505 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221496 .
?targetMotifMatchRegionMatch503 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221504 .
?targetMotifMatchRegionMatchBeginMF_00221504 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221497 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221505 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon493 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon493 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221494, 1, (STRLEN(?templateMotifCigarP0A769MF_00221494) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221494, CONCAT('^(?:-*[^-]){', STR(((351 - ?templateMotifSequenceMatchBeginPositionP0A769495) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1506) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221496, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221496) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1506), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221496, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221496) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1506), '}'), '')))), '[^-]', ''))) AS ?step2507) .
BIND(((?step2507 + ?targetMotifMatchRegionMatchBeginPositionMF_00221497) - 1) AS ?thisPositionOn124) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221494, 1, (STRLEN(?templateMotifCigarP0A769MF_00221494) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221494, CONCAT('^(?:-*[^-]){', STR(((370 - ?templateMotifSequenceMatchBeginPositionP0A769495) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1508) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221496, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221496) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221496, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221496) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221496, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), '')))), '[^-]', ''))) AS ?step2509) .
BIND(((?step2509 + ?targetMotifMatchRegionMatchBeginPositionMF_00221497) - 1) AS ?thisPositionOn125) .
BIND(?this AS ?pfs1t510) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb122) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse123) .
FILTER ((BOUND(?thisPositionOn124) && BOUND(?thisPositionOn125))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a121')) AS ?annotation121) .
BIND(?this AS ?pfs120) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch516 faldo:location ?templateMotifSequenceMatchRegionP0A769517 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769519 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221512 .
?templateMotifSequenceMatchRegionP0A769517 faldo:begin ?templateMotifSequenceMatchBeginP0A769518 .
?templateMotifSequenceMatchBeginP0A769518 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769513 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769519 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch520 faldo:location ?targetMotifMatchRegionMatch521 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221523 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221514 .
?targetMotifMatchRegionMatch521 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221522 .
?targetMotifMatchRegionMatchBeginMF_00221522 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221515 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221523 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon511 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon511 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221512, 1, (STRLEN(?templateMotifCigarP0A769MF_00221512) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221512, CONCAT('^(?:-*[^-]){', STR(((371 - ?templateMotifSequenceMatchBeginPositionP0A769513) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1524) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221514, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1524), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221514, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1524), '}'), '')))), '[^-]', ''))) AS ?step2525) .
BIND(((?step2525 + ?targetMotifMatchRegionMatchBeginPositionMF_00221515) - 1) AS ?thisPositionOn130) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221512, 1, (STRLEN(?templateMotifCigarP0A769MF_00221512) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221512, CONCAT('^(?:-*[^-]){', STR(((387 - ?templateMotifSequenceMatchBeginPositionP0A769513) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1526) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221514, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1526), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221514, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221514) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221514, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1526), '}'), '')))), '[^-]', ''))) AS ?step2527) .
BIND(((?step2527 + ?targetMotifMatchRegionMatchBeginPositionMF_00221515) - 1) AS ?thisPositionOn131) .
BIND(?this AS ?pfs1t528) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn130))) AS ?pfsb128) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfse129) .
FILTER ((BOUND(?thisPositionOn130) && BOUND(?thisPositionOn131))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a127')) AS ?annotation127) .
BIND(?this AS ?pfs126) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch534 faldo:location ?templateMotifSequenceMatchRegionP0A769535 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769537 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221530 .
?templateMotifSequenceMatchRegionP0A769535 faldo:begin ?templateMotifSequenceMatchBeginP0A769536 .
?templateMotifSequenceMatchBeginP0A769536 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769531 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769537 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch538 faldo:location ?targetMotifMatchRegionMatch539 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221541 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221532 .
?targetMotifMatchRegionMatch539 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221540 .
?targetMotifMatchRegionMatchBeginMF_00221540 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221533 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221541 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon529 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon529 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221530, 1, (STRLEN(?templateMotifCigarP0A769MF_00221530) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221530, CONCAT('^(?:-*[^-]){', STR(((388 - ?templateMotifSequenceMatchBeginPositionP0A769531) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1542) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221532, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221532) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1542), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221532, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221532) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1542), '}'), '')))), '[^-]', ''))) AS ?step2543) .
BIND(((?step2543 + ?targetMotifMatchRegionMatchBeginPositionMF_00221533) - 1) AS ?thisPositionOn136) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221530, 1, (STRLEN(?templateMotifCigarP0A769MF_00221530) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221530, CONCAT('^(?:-*[^-]){', STR(((406 - ?templateMotifSequenceMatchBeginPositionP0A769531) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1544) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221532, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221532) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1544), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221532, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221532) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1544), '}'), '')))), '[^-]', ''))) AS ?step2545) .
BIND(((?step2545 + ?targetMotifMatchRegionMatchBeginPositionMF_00221533) - 1) AS ?thisPositionOn137) .
BIND(?this AS ?pfs1t546) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfsb134) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfse135) .
FILTER ((BOUND(?thisPositionOn136) && BOUND(?thisPositionOn137))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a133')) AS ?annotation133) .
BIND(?this AS ?pfs132) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch552 faldo:location ?templateMotifSequenceMatchRegionP0A769553 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0A769555 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0A769MF_00221548 .
?templateMotifSequenceMatchRegionP0A769553 faldo:begin ?templateMotifSequenceMatchBeginP0A769554 .
?templateMotifSequenceMatchBeginP0A769554 faldo:position ?templateMotifSequenceMatchBeginPositionP0A769549 ;
faldo:reference isoform:P0A769-1 .
?templateMotifSequenceProfileAlignmentOperationP0A769555 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
?targetMotifMatch556 faldo:location ?targetMotifMatchRegionMatch557 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00221559 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0A769MF_00221550 .
?targetMotifMatchRegionMatch557 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00221558 .
?targetMotifMatchRegionMatchBeginMF_00221558 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00221551 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00221559 edam:has_input signature:MF_00221 ;
rdf:type edam:operation_0300 .
VALUES ?supertaxon547 {taxon:561 taxon:590 taxon:620}
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ ?supertaxon547 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0A769MF_00221548, 1, (STRLEN(?templateMotifCigarP0A769MF_00221548) - STRLEN(REPLACE(?templateMotifCigarP0A769MF_00221548, CONCAT('^(?:-*[^-]){', STR(((407 - ?templateMotifSequenceMatchBeginPositionP0A769549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1560) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0A769MF_00221550, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221550) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221550, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1560), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0A769MF_00221550, 1, (STRLEN(?targetMotifMatchCigarP0A769MF_00221550) - STRLEN(REPLACE(?targetMotifMatchCigarP0A769MF_00221550, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1560), '}'), '')))), '[^-]', ''))) AS ?step2561) .
BIND(((?step2561 + ?targetMotifMatchRegionMatchBeginPositionMF_00221551) - 1) AS ?thisPositionOn142) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn143) .
BIND(?this AS ?pfs1t562) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn142))) AS ?pfsb140) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfse141) .
FILTER ((BOUND(?thisPositionOn142) && BOUND(?thisPositionOn143))) .
BIND(URI(CONCAT(STR(?this), '#MF_00221a139')) AS ?annotation139) .
BIND(?this AS ?pfs138) .
}
OPTIONAL {
?this a up:Protein .
{
?this up:proteome |
| http://purl.uniprot.org/unirules/MF_00221 | http://www.w3.org/ns/shacl#rule | http://purl.uniprot.org/unirules/MF_00221#construct |
