| http://purl.uniprot.org/unirules/MF_01137#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:397097 up:source unirule:MF_01137 .
_:397098 up:source unirule:MF_01137 .
_:397099 up:source unirule:MF_01137 .
_:397100 up:source unirule:MF_01137 .
_:397101 up:source unirule:MF_01137 .
_:397102 up:source unirule:MF_01137 .
_:397103 up:source unirule:MF_01137 .
_:397104 up:source unirule:MF_01137 .
_:397105 up:source unirule:MF_01137 .
_:397106 up:source unirule:MF_01137 .
_:397107 up:source unirule:MF_01137 .
_:397108 up:source unirule:MF_01137 .
_:397109 up:source unirule:MF_01137 .
_:397110 up:source unirule:MF_01137 .
_:397111 up:source unirule:MF_01137 .
_:397112 up:source unirule:MF_01137 .
_:397113 up:source unirule:MF_01137 .
_:397114 up:source unirule:MF_01137 .
_:397115 up:source unirule:MF_01137 .
_:397116 up:source unirule:MF_01137 .
_:397117 up:source unirule:MF_01137 .
_:397118 up:source unirule:MF_01137 .
_:397119 up:source unirule:MF_01137 .
_:397120 up:source unirule:MF_01137 .
_:397121 up:source unirule:MF_01137 .
_:397122 up:source unirule:MF_01137 .
_:397123 up:source unirule:MF_01137 .
_:397124 up:source unirule:MF_01137 .
_:397125 up:source unirule:MF_01137 .
_:397126 up:source unirule:MF_01137 .
_:397127 up:source unirule:MF_01137 .
_:397128 up:source unirule:MF_01137 .
_:397129 up:source unirule:MF_01137 .
_:397130 up:source unirule:MF_01137 .
_:397131 up:source unirule:MF_01137 .
_:397132 up:source unirule:MF_01137 .
_:397133 up:source unirule:MF_01137 .
_:397134 up:source unirule:MF_01137 .
_:397135 up:source unirule:MF_01137 .
_:397136 up:source unirule:MF_01137 .
_:397137 up:source unirule:MF_01137 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation5 ,
?annotation6 ,
?annotation7 ,
?annotation8 ,
?annotation9 ;
up:classifiedWith GO:0043885 ,
keyword:479 ,
keyword:560 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.2.7.4' ;
up:fullName 'Acetyl-CoA decarbonylase/synthase complex subunit alpha' ;
up:shortName 'ACDS complex subunit alpha' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'ACDS complex carbon monoxide dehydrogenase subunit alpha' ;
up:shortName 'ACDS CODH subunit alpha' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'cdhA' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:cofactor chebi:49883 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 7 [4Fe-4S] clusters per heterotetramer.' .
?annotation6 up:cofactor chebi:47739 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 2 [Ni-4Fe-4S] clusters per heterotetramer.' .
?annotation7 a up:Subunit_Annotation ;
rdfs:comment 'Heterotetramer of two alpha and two epsilon subunits. The ACDS complex is made up of alpha, epsilon, beta, gamma and delta subunits with a probable stoichiometry of (alpha(2)epsilon(2))(4)-beta(8)-(gamma(1)delta(1))(8).' .
?annotation8 a up:Domain_Annotation ;
rdfs:comment 'Cluster B is an all-cysteinyl-liganded 4Fe-4S cluster; cluster C is a mixed Ni-Fe-S cluster which is the active site of CO oxidation. Cluster D is also an all-cysteinyl-liganded 4Fe-4S cluster that bridges the two subunits of the CODH dimer. Contains two additional 4Fe-4S clusters, dubbed E and F, that probably transport electrons from ferredoxin to the B cluster.' .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the Ni-containing carbon monoxide dehydrogenase family.' .
?case10 up:classifiedWith GO:0016151 ,
keyword:533 .
?case11 up:classifiedWith GO:0019385 ,
keyword:484 .
?case13 up:classifiedWith keyword:4 .
?case14 up:classifiedWith GO:0005506 ,
keyword:408 ,
keyword:411 .
?pfs15 up:annotation ?annotation16 ,
?annotation22 ,
?annotation28 ,
?annotation34 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
up:ligand ?ligand19 ;
rdf:type up:Binding_Site_Annotation .
?pfsb17 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?ligand19 rdfs:subClassOf chebi:49883 .
?annotation22 faldo:begin ?pfsb23 ;
faldo:end ?pfse24 ;
up:ligand ?ligand25 ;
rdf:type up:Binding_Site_Annotation .
?pfsb23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse24 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?ligand25 rdfs:subClassOf chebi:49883 .
?annotation28 faldo:begin ?pfsb29 ;
faldo:end ?pfse30 ;
up:ligand ?ligand31 ;
rdf:type up:Binding_Site_Annotation .
?pfsb29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse30 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?ligand31 rdfs:subClassOf chebi:49883 .
?annotation34 faldo:begin ?pfsb35 ;
faldo:end ?pfse36 ;
up:ligand ?ligand37 ;
rdf:type up:Binding_Site_Annotation .
?pfsb35 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?pfse36 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?ligand37 rdfs:subClassOf chebi:49883 .
?pfs40 up:annotation ?annotation41 ,
?annotation47 ,
?annotation53 ,
?annotation59 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
up:ligand ?ligand44 ;
rdf:type up:Binding_Site_Annotation .
?pfsb42 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?ligand44 rdfs:subClassOf chebi:49883 .
?annotation47 faldo:begin ?pfsb48 ;
faldo:end ?pfse49 ;
up:ligand ?ligand50 ;
rdf:type up:Binding_Site_Annotation .
?pfsb48 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?pfse49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?ligand50 rdfs:subClassOf chebi:49883 .
?annotation53 faldo:begin ?pfsb54 ;
faldo:end ?pfse55 ;
up:ligand ?ligand56 ;
rdf:type up:Binding_Site_Annotation .
?pfsb54 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?pfse55 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?ligand56 rdfs:subClassOf chebi:49883 .
?annotation59 faldo:begin ?pfsb60 ;
faldo:end ?pfse61 ;
up:ligand ?ligand62 ;
rdf:type up:Binding_Site_Annotation .
?pfsb60 faldo:position ?thisPositionOn63 ;
rdf:type faldo:ExactPosition .
?pfse61 faldo:position ?thisPositionOn64 ;
rdf:type faldo:ExactPosition .
?ligand62 rdfs:subClassOf chebi:49883 .
?pfs65 up:annotation ?annotation66 ,
?annotation72 ,
?annotation78 ,
?annotation84 .
?annotation66 faldo:begin ?pfsb67 ;
faldo:end ?pfse68 ;
up:ligand ?ligand69 ;
rdf:type up:Binding_Site_Annotation .
?pfsb67 faldo:position ?thisPositionOn70 ;
rdf:type faldo:ExactPosition .
?pfse68 faldo:position ?thisPositionOn71 ;
rdf:type faldo:ExactPosition .
?ligand69 rdfs:subClassOf chebi:49883 .
?annotation72 faldo:begin ?pfsb73 ;
faldo:end ?pfse74 ;
up:ligand ?ligand75 ;
rdf:type up:Binding_Site_Annotation .
?pfsb73 faldo:position ?thisPositionOn76 ;
rdf:type faldo:ExactPosition .
?pfse74 faldo:position ?thisPositionOn77 ;
rdf:type faldo:ExactPosition .
?ligand75 rdfs:subClassOf chebi:49883 .
?annotation78 faldo:begin ?pfsb79 ;
faldo:end ?pfse80 ;
up:ligand ?ligand81 ;
rdf:type up:Binding_Site_Annotation .
?pfsb79 faldo:position ?thisPositionOn82 ;
rdf:type faldo:ExactPosition .
?pfse80 faldo:position ?thisPositionOn83 ;
rdf:type faldo:ExactPosition .
?ligand81 rdfs:subClassOf chebi:49883 .
?annotation84 faldo:begin ?pfsb85 ;
faldo:end ?pfse86 ;
up:ligand ?ligand87 ;
rdf:type up:Binding_Site_Annotation .
?pfsb85 faldo:position ?thisPositionOn88 ;
rdf:type faldo:ExactPosition .
?pfse86 faldo:position ?thisPositionOn89 ;
rdf:type faldo:ExactPosition .
?ligand87 rdfs:subClassOf chebi:49883 .
?pfs90 up:annotation ?annotation91 ,
?annotation97 ,
?annotation103 ,
?annotation109 ,
?annotation115 ,
?annotation121 .
?annotation91 faldo:begin ?pfsb92 ;
faldo:end ?pfse93 ;
up:ligand ?ligand94 ;
rdf:type up:Binding_Site_Annotation .
?pfsb92 faldo:position ?thisPositionOn95 ;
rdf:type faldo:ExactPosition .
?pfse93 faldo:position ?thisPositionOn96 ;
rdf:type faldo:ExactPosition .
?ligand94 rdfs:subClassOf chebi:47739 .
?annotation97 faldo:begin ?pfsb98 ;
faldo:end ?pfse99 ;
up:ligand ?ligand100 ;
rdf:type up:Binding_Site_Annotation .
?pfsb98 faldo:position ?thisPositionOn101 ;
rdf:type faldo:ExactPosition .
?pfse99 faldo:position ?thisPositionOn102 ;
rdf:type faldo:ExactPosition .
?ligand100 rdfs:subClassOf chebi:47739 .
?annotation103 faldo:begin ?pfsb104 ;
faldo:end ?pfse105 ;
up:ligand ?ligand106 ;
rdf:type up:Binding_Site_Annotation .
?pfsb104 faldo:position ?thisPositionOn107 ;
rdf:type faldo:ExactPosition .
?pfse105 faldo:position ?thisPositionOn108 ;
rdf:type faldo:ExactPosition .
?ligand106 rdfs:subClassOf chebi:47739 .
?annotation109 faldo:begin ?pfsb110 ;
faldo:end ?pfse111 ;
up:ligand ?ligand112 ;
rdf:type up:Binding_Site_Annotation .
?pfsb110 faldo:position ?thisPositionOn113 ;
rdf:type faldo:ExactPosition .
?pfse111 faldo:position ?thisPositionOn114 ;
rdf:type faldo:ExactPosition .
?ligand112 rdfs:subClassOf chebi:47739 .
?annotation115 faldo:begin ?pfsb116 ;
faldo:end ?pfse117 ;
up:ligand ?ligand118 ;
rdf:type up:Binding_Site_Annotation .
?pfsb116 faldo:position ?thisPositionOn119 ;
rdf:type faldo:ExactPosition .
?pfse117 faldo:position ?thisPositionOn120 ;
rdf:type faldo:ExactPosition .
?ligand118 rdfs:subClassOf chebi:47739 .
?annotation121 faldo:begin ?pfsb122 ;
faldo:end ?pfse123 ;
up:ligand ?ligand124 ;
rdf:type up:Binding_Site_Annotation .
?pfsb122 faldo:position ?thisPositionOn125 ;
rdf:type faldo:ExactPosition .
?pfse123 faldo:position ?thisPositionOn126 ;
rdf:type faldo:ExactPosition .
?ligand124 rdfs:subClassOf chebi:47739 .
?pfs127 up:annotation ?annotation128 ,
?annotation134 .
?annotation128 faldo:begin ?pfsb129 ;
faldo:end ?pfse130 ;
up:ligand ?ligand131 ;
rdf:type up:Binding_Site_Annotation .
?pfsb129 faldo:position ?thisPositionOn132 ;
rdf:type faldo:ExactPosition .
?pfse130 faldo:position ?thisPositionOn133 ;
rdf:type faldo:ExactPosition .
?ligand131 rdfs:subClassOf chebi:49883 .
?annotation134 faldo:begin ?pfsb135 ;
faldo:end ?pfse136 ;
up:ligand ?ligand137 ;
rdf:type up:Binding_Site_Annotation .
?pfsb135 faldo:position ?thisPositionOn138 ;
rdf:type faldo:ExactPosition .
?pfse136 faldo:position ?thisPositionOn139 ;
rdf:type faldo:ExactPosition .
?ligand137 rdfs:subClassOf chebi:49883 .
?pfs140 up:annotation ?annotation141 .
?annotation141 faldo:begin ?pfsb142 ;
faldo:end ?pfse143 ;
up:ligand ?ligand144 ;
rdf:type up:Binding_Site_Annotation .
?pfsb142 faldo:position ?thisPositionOn145 ;
rdf:type faldo:ExactPosition .
?pfse143 faldo:position ?thisPositionOn146 ;
rdf:type faldo:ExactPosition .
?ligand144 rdfs:subClassOf chebi:17245 .
_:397138 a rdf:Statement ;
up:attribution _:397097 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:397139 a rdf:Statement ;
up:attribution _:397098 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:397140 a rdf:Statement ;
up:attribution _:397099 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:397141 a rdf:Statement ;
up:attribution _:397100 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:397142 a rdf:Statement ;
up:attribution _:397101 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:397143 a rdf:Statement ;
up:attribution _:397102 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:397144 a rdf:Statement ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:397145 a rdf:Statement ;
up:attribution _:397104 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:397146 a rdf:Statement ;
up:attribution _:397105 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:397147 a rdf:Statement ;
up:attribution _:397106 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:397148 a rdf:Statement ;
up:attribution _:397107 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:397149 a rdf:Statement ;
up:attribution _:397108 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0043885 .
_:397150 a rdf:Statement ;
up:attribution _:397109 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:533 .
_:397151 a rdf:Statement ;
up:attribution _:397110 ;
rdf:subject ?case10 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0016151 .
_:397152 a rdf:Statement ;
up:attribution _:397111 ;
rdf:subject ?case11 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:484 .
_:397153 a rdf:Statement ;
up:attribution _:397112 ;
rdf:subject ?case11 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0019385 .
_:397154 a rdf:Statement ;
up:attribution _:397113 ;
rdf:subject ?case13 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:4 .
_:397155 a rdf:Statement ;
up:attribution _:397114 ;
rdf:subject ?case14 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:408 .
_:397156 a rdf:Statement ;
up:attribution _:397115 ;
rdf:subject ?case14 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:411 .
_:397157 a rdf:Statement ;
up:attribution _:397116 ;
rdf:subject ?case14 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005506 .
_:397158 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:397159 a rdf:Statement ;
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rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:397160 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
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rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
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up:source unirule:MF_01137 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:397163 a rdf:Statement ;
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rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:397164 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation34 .
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rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation34 .
_:397166 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:397167 a rdf:Statement ;
up:attribution _:397121 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:397168 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:397169 a rdf:Statement ;
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rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:397170 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
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rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
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rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
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rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
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up:source unirule:MF_01137 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation66 .
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rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation66 .
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up:source unirule:MF_01137 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation72 .
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rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation72 .
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rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
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rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
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up:source unirule:MF_01137 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation84 .
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rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation84 .
_:397182 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation91 .
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up:attribution _:397129 ;
rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation91 .
_:397184 a rdf:Statement ;
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:397186 a rdf:Statement ;
up:source unirule:MF_01137 ;
rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation103 .
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation103 .
_:397188 a rdf:Statement ;
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
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up:source unirule:MF_01137 ;
rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation121 .
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rdf:subject ?pfs90 ;
rdf:predicate up:annotation ;
rdf:object ?annotation121 .
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rdf:subject ?pfs127 ;
rdf:predicate up:annotation ;
rdf:object ?annotation128 .
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rdf:subject ?pfs127 ;
rdf:predicate up:annotation ;
rdf:object ?annotation128 .
_:397196 a rdf:Statement ;
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rdf:subject ?pfs127 ;
rdf:predicate up:annotation ;
rdf:object ?annotation134 .
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rdf:subject ?pfs127 ;
rdf:predicate up:annotation ;
rdf:object ?annotation134 .
_:397198 a rdf:Statement ;
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rdf:subject ?pfs140 ;
rdf:predicate up:annotation ;
rdf:object ?annotation141 .
_:397199 a rdf:Statement ;
up:attribution _:397137 ;
rdf:subject ?pfs140 ;
rdf:predicate up:annotation ;
rdf:object ?annotation141 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01137
#Rule MF_01137 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2024-09-04
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01137 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(URI(CONCAT(STR(?this), '#MF_01137a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch151 faldo:location ?templateMotifSequenceMatchRegionQ46G04152 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46G04154 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ46G04MF_01137147 .
?templateMotifSequenceMatchRegionQ46G04152 faldo:begin ?templateMotifSequenceMatchBeginQ46G04153 .
?templateMotifSequenceMatchBeginQ46G04153 faldo:position ?templateMotifSequenceMatchBeginPositionQ46G04148 ;
faldo:reference isoform:Q46G04-1 .
?templateMotifSequenceProfileAlignmentOperationQ46G04154 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
?targetMotifMatch155 faldo:location ?targetMotifMatchRegionMatch156 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01137158 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ46G04MF_01137149 .
?targetMotifMatchRegionMatch156 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01137157 .
?targetMotifMatchRegionMatchBeginMF_01137157 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01137150 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01137158 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_2) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137147, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137147) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137147, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionQ46G04148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1159) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1159), '}'), '')))), '[^-]', ''))) AS ?step2160) .
BIND(((?step2160 + ?targetMotifMatchRegionMatchBeginPositionMF_01137150) - 1) AS ?thisPositionOn20) .
BIND(?thisPositionOn20 AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t161) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse18) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn20, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137147, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137147) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137147, CONCAT('^(?:-*[^-]){', STR(((79 - ?templateMotifSequenceMatchBeginPositionQ46G04148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1162) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1162), '}'), '')))), '[^-]', ''))) AS ?step2163) .
BIND(((?step2163 + ?targetMotifMatchRegionMatchBeginPositionMF_01137150) - 1) AS ?thisPositionOn26) .
BIND(?thisPositionOn26 AS ?thisPositionOn27) .
BIND(?this AS ?pfs1t164) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137147, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137147) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137147, CONCAT('^(?:-*[^-]){', STR(((84 - ?templateMotifSequenceMatchBeginPositionQ46G04148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1165) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1165), '}'), '')))), '[^-]', ''))) AS ?step2166) .
BIND(((?step2166 + ?targetMotifMatchRegionMatchBeginPositionMF_01137150) - 1) AS ?thisPositionOn32) .
BIND(?thisPositionOn32 AS ?thisPositionOn33) .
BIND(?this AS ?pfs1t167) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137147, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137147) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137147, CONCAT('^(?:-*[^-]){', STR(((94 - ?templateMotifSequenceMatchBeginPositionQ46G04148) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1168) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137149, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137149) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137149, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1168), '}'), '')))), '[^-]', ''))) AS ?step2169) .
BIND(((?step2169 + ?targetMotifMatchRegionMatchBeginPositionMF_01137150) - 1) AS ?thisPositionOn38) .
BIND(?thisPositionOn38 AS ?thisPositionOn39) .
BIND(?this AS ?pfs1t170) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1) = 'C')) .
BIND(?this AS ?pfs15) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch175 faldo:location ?templateMotifSequenceMatchRegionQ46G04176 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46G04178 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ46G04MF_01137171 .
?templateMotifSequenceMatchRegionQ46G04176 faldo:begin ?templateMotifSequenceMatchBeginQ46G04177 .
?templateMotifSequenceMatchBeginQ46G04177 faldo:position ?templateMotifSequenceMatchBeginPositionQ46G04172 ;
faldo:reference isoform:Q46G04-1 .
?templateMotifSequenceProfileAlignmentOperationQ46G04178 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
?targetMotifMatch179 faldo:location ?targetMotifMatchRegionMatch180 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01137182 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ46G04MF_01137173 .
?targetMotifMatchRegionMatch180 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01137181 .
?targetMotifMatchRegionMatchBeginMF_01137181 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01137174 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01137182 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_5) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137171, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137171) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137171, CONCAT('^(?:-*[^-]){', STR(((427 - ?templateMotifSequenceMatchBeginPositionQ46G04172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1183) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), '')))), '[^-]', ''))) AS ?step2184) .
BIND(((?step2184 + ?targetMotifMatchRegionMatchBeginPositionMF_01137174) - 1) AS ?thisPositionOn45) .
BIND(?thisPositionOn45 AS ?thisPositionOn46) .
BIND(?this AS ?pfs2t185) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137171, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137171) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137171, CONCAT('^(?:-*[^-]){', STR(((455 - ?templateMotifSequenceMatchBeginPositionQ46G04172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1186) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), '')))), '[^-]', ''))) AS ?step2187) .
BIND(((?step2187 + ?targetMotifMatchRegionMatchBeginPositionMF_01137174) - 1) AS ?thisPositionOn51) .
BIND(?thisPositionOn51 AS ?thisPositionOn52) .
BIND(?this AS ?pfs2t188) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137171, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137171) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137171, CONCAT('^(?:-*[^-]){', STR(((458 - ?templateMotifSequenceMatchBeginPositionQ46G04172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1189) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), '')))), '[^-]', ''))) AS ?step2190) .
BIND(((?step2190 + ?targetMotifMatchRegionMatchBeginPositionMF_01137174) - 1) AS ?thisPositionOn57) .
BIND(?thisPositionOn57 AS ?thisPositionOn58) .
BIND(?this AS ?pfs2t191) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137171, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137171) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137171, CONCAT('^(?:-*[^-]){', STR(((461 - ?templateMotifSequenceMatchBeginPositionQ46G04172) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1192) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137173, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137173) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137173, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1192), '}'), '')))), '[^-]', ''))) AS ?step2193) .
BIND(((?step2193 + ?targetMotifMatchRegionMatchBeginPositionMF_01137174) - 1) AS ?thisPositionOn63) .
BIND(?thisPositionOn63 AS ?thisPositionOn64) .
BIND(?this AS ?pfs2t194) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'C')) .
BIND(?this AS ?pfs40) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch199 faldo:location ?templateMotifSequenceMatchRegionQ46G04200 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46G04202 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ46G04MF_01137195 .
?templateMotifSequenceMatchRegionQ46G04200 faldo:begin ?templateMotifSequenceMatchBeginQ46G04201 .
?templateMotifSequenceMatchBeginQ46G04201 faldo:position ?templateMotifSequenceMatchBeginPositionQ46G04196 ;
faldo:reference isoform:Q46G04-1 .
?templateMotifSequenceProfileAlignmentOperationQ46G04202 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
?targetMotifMatch203 faldo:location ?targetMotifMatchRegionMatch204 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01137206 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ46G04MF_01137197 .
?targetMotifMatchRegionMatch204 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01137205 .
?targetMotifMatchRegionMatchBeginMF_01137205 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01137198 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01137206 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_4) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137195, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137195) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137195, CONCAT('^(?:-*[^-]){', STR(((417 - ?templateMotifSequenceMatchBeginPositionQ46G04196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1207) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1207), '}'), '')))), '[^-]', ''))) AS ?step2208) .
BIND(((?step2208 + ?targetMotifMatchRegionMatchBeginPositionMF_01137198) - 1) AS ?thisPositionOn70) .
BIND(?thisPositionOn70 AS ?thisPositionOn71) .
BIND(?this AS ?pfs3t209) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137195, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137195) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137195, CONCAT('^(?:-*[^-]){', STR(((420 - ?templateMotifSequenceMatchBeginPositionQ46G04196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1210) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1210), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1210), '}'), '')))), '[^-]', ''))) AS ?step2211) .
BIND(((?step2211 + ?targetMotifMatchRegionMatchBeginPositionMF_01137198) - 1) AS ?thisPositionOn76) .
BIND(?thisPositionOn76 AS ?thisPositionOn77) .
BIND(?this AS ?pfs3t212) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb73) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse74) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn76, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137195, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137195) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137195, CONCAT('^(?:-*[^-]){', STR(((423 - ?templateMotifSequenceMatchBeginPositionQ46G04196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1213) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), '')))), '[^-]', ''))) AS ?step2214) .
BIND(((?step2214 + ?targetMotifMatchRegionMatchBeginPositionMF_01137198) - 1) AS ?thisPositionOn82) .
BIND(?thisPositionOn82 AS ?thisPositionOn83) .
BIND(?this AS ?pfs3t215) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137195, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137195) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137195, CONCAT('^(?:-*[^-]){', STR(((465 - ?templateMotifSequenceMatchBeginPositionQ46G04196) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1216) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137197, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137197) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137197, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1216), '}'), '')))), '[^-]', ''))) AS ?step2217) .
BIND(((?step2217 + ?targetMotifMatchRegionMatchBeginPositionMF_01137198) - 1) AS ?thisPositionOn88) .
BIND(?thisPositionOn88 AS ?thisPositionOn89) .
BIND(?this AS ?pfs3t218) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb85) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse86) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn88, 1) = 'C')) .
BIND(?this AS ?pfs65) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch223 faldo:location ?templateMotifSequenceMatchRegionQ46G04224 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46G04226 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ46G04MF_01137219 .
?templateMotifSequenceMatchRegionQ46G04224 faldo:begin ?templateMotifSequenceMatchBeginQ46G04225 .
?templateMotifSequenceMatchBeginQ46G04225 faldo:position ?templateMotifSequenceMatchBeginPositionQ46G04220 ;
faldo:reference isoform:Q46G04-1 .
?templateMotifSequenceProfileAlignmentOperationQ46G04226 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
?targetMotifMatch227 faldo:location ?targetMotifMatchRegionMatch228 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01137230 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ46G04MF_01137221 .
?targetMotifMatchRegionMatch228 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01137229 .
?targetMotifMatchRegionMatchBeginMF_01137229 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01137222 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01137230 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_3) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137219, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137219) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137219, CONCAT('^(?:-*[^-]){', STR(((250 - ?templateMotifSequenceMatchBeginPositionQ46G04220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1231) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1231), '}'), '')))), '[^-]', ''))) AS ?step2232) .
BIND(((?step2232 + ?targetMotifMatchRegionMatchBeginPositionMF_01137222) - 1) AS ?thisPositionOn95) .
BIND(?thisPositionOn95 AS ?thisPositionOn96) .
BIND(?this AS ?pfs4t233) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfsb92) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfse93) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn95, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137219, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137219) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137219, CONCAT('^(?:-*[^-]){', STR(((278 - ?templateMotifSequenceMatchBeginPositionQ46G04220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) .
BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_01137222) - 1) AS ?thisPositionOn101) .
BIND(?thisPositionOn101 AS ?thisPositionOn102) .
BIND(?this AS ?pfs4t236) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfsb98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfse99) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn101, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137219, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137219) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137219, CONCAT('^(?:-*[^-]){', STR(((323 - ?templateMotifSequenceMatchBeginPositionQ46G04220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1237) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1237), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1237), '}'), '')))), '[^-]', ''))) AS ?step2238) .
BIND(((?step2238 + ?targetMotifMatchRegionMatchBeginPositionMF_01137222) - 1) AS ?thisPositionOn107) .
BIND(?thisPositionOn107 AS ?thisPositionOn108) .
BIND(?this AS ?pfs4t239) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfsb104) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfse105) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn107, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137219, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137219) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137219, CONCAT('^(?:-*[^-]){', STR(((523 - ?templateMotifSequenceMatchBeginPositionQ46G04220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1240) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), '')))), '[^-]', ''))) AS ?step2241) .
BIND(((?step2241 + ?targetMotifMatchRegionMatchBeginPositionMF_01137222) - 1) AS ?thisPositionOn113) .
BIND(?thisPositionOn113 AS ?thisPositionOn114) .
BIND(?this AS ?pfs4t242) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfsb110) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfse111) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn113, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137219, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137219) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137219, CONCAT('^(?:-*[^-]){', STR(((552 - ?templateMotifSequenceMatchBeginPositionQ46G04220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1243) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1243), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1243), '}'), '')))), '[^-]', ''))) AS ?step2244) .
BIND(((?step2244 + ?targetMotifMatchRegionMatchBeginPositionMF_01137222) - 1) AS ?thisPositionOn119) .
BIND(?thisPositionOn119 AS ?thisPositionOn120) .
BIND(?this AS ?pfs4t245) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137219, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137219) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137219, CONCAT('^(?:-*[^-]){', STR(((587 - ?templateMotifSequenceMatchBeginPositionQ46G04220) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1246) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137221, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137221) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137221, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1246), '}'), '')))), '[^-]', ''))) AS ?step2247) .
BIND(((?step2247 + ?targetMotifMatchRegionMatchBeginPositionMF_01137222) - 1) AS ?thisPositionOn125) .
BIND(?thisPositionOn125 AS ?thisPositionOn126) .
BIND(?this AS ?pfs4t248) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfsb122) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfse123) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn125, 1) = 'C')) .
BIND(?this AS ?pfs90) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch253 faldo:location ?templateMotifSequenceMatchRegionQ46G04254 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46G04256 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ46G04MF_01137249 .
?templateMotifSequenceMatchRegionQ46G04254 faldo:begin ?templateMotifSequenceMatchBeginQ46G04255 .
?templateMotifSequenceMatchBeginQ46G04255 faldo:position ?templateMotifSequenceMatchBeginPositionQ46G04250 ;
faldo:reference isoform:Q46G04-1 .
?templateMotifSequenceProfileAlignmentOperationQ46G04256 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
?targetMotifMatch257 faldo:location ?targetMotifMatchRegionMatch258 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01137260 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ46G04MF_01137251 .
?targetMotifMatchRegionMatch258 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01137259 .
?targetMotifMatchRegionMatchBeginMF_01137259 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01137252 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01137260 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137249, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137249) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137249, CONCAT('^(?:-*[^-]){', STR(((73 - ?templateMotifSequenceMatchBeginPositionQ46G04250) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1261) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137251, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137251) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137251, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137251) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1261), '}'), '')))), '[^-]', ''))) AS ?step2262) .
BIND(((?step2262 + ?targetMotifMatchRegionMatchBeginPositionMF_01137252) - 1) AS ?thisPositionOn132) .
BIND(?thisPositionOn132 AS ?thisPositionOn133) .
BIND(?this AS ?pfs5t263) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfsb129) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn133))) AS ?pfse130) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn132, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137249, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137249) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137249, CONCAT('^(?:-*[^-]){', STR(((77 - ?templateMotifSequenceMatchBeginPositionQ46G04250) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1264) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137251, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137251) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137251, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137251) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137251, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), '')))), '[^-]', ''))) AS ?step2265) .
BIND(((?step2265 + ?targetMotifMatchRegionMatchBeginPositionMF_01137252) - 1) AS ?thisPositionOn138) .
BIND(?thisPositionOn138 AS ?thisPositionOn139) .
BIND(?this AS ?pfs5t266) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfsb135) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn139))) AS ?pfse136) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn138, 1) = 'C')) .
BIND(?this AS ?pfs127) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch271 faldo:location ?templateMotifSequenceMatchRegionQ46G04272 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ46G04274 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ46G04MF_01137267 .
?templateMotifSequenceMatchRegionQ46G04272 faldo:begin ?templateMotifSequenceMatchBeginQ46G04273 .
?templateMotifSequenceMatchBeginQ46G04273 faldo:position ?templateMotifSequenceMatchBeginPositionQ46G04268 ;
faldo:reference isoform:Q46G04-1 .
?templateMotifSequenceProfileAlignmentOperationQ46G04274 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
?targetMotifMatch275 faldo:location ?targetMotifMatchRegionMatch276 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01137278 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ46G04MF_01137269 .
?targetMotifMatchRegionMatch276 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01137277 .
?targetMotifMatchRegionMatchBeginMF_01137277 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01137270 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01137278 edam:has_input signature:MF_01137 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ46G04MF_01137267, 1, (STRLEN(?templateMotifCigarQ46G04MF_01137267) - STRLEN(REPLACE(?templateMotifCigarQ46G04MF_01137267, CONCAT('^(?:-*[^-]){', STR(((117 - ?templateMotifSequenceMatchBeginPositionQ46G04268) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1279) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137269, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137269) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1279), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ46G04MF_01137269, 1, (STRLEN(?targetMotifMatchCigarQ46G04MF_01137269) - STRLEN(REPLACE(?targetMotifMatchCigarQ46G04MF_01137269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1279), '}'), '')))), '[^-]', ''))) AS ?step2280) .
BIND(((?step2280 + ?targetMotifMatchRegionMatchBeginPositionMF_01137270) - 1) AS ?thisPositionOn145) .
BIND(?thisPositionOn145 AS ?thisPositionOn146) .
BIND(?this AS ?pfs6t281) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn145))) AS ?pfsb142) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn146))) AS ?pfse143) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn145, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01137a141')) AS ?annotation141) .
BIND(?this AS ?pfs140) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag282) .
}
BIND(IF(BOUND(?tagFTGRP_3), ?caseWithTag282, ?UNBOUND_VARIABLE) AS ?case10) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2206 .
BIND(?this AS ?case11) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:2206 .
})) .
BIND(?this AS ?case12) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag283) .
}
BIND(IF((BOUND(?tagFTGRP_1) || BOUND(?tagFTGRP_2) || BOUND(?tagFTGRP_4) || BOUND(?tagFTGRP_5)), ?caseWithTag283, ?UNBOUND_VARIABLE) AS ?case13) .
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag284) .
}
BIND(IF((BOUND(?tagFTGRP_1) || BOUND(?tagFTGRP_2) || BOUND(?tagFTGRP_3) || BOUND(?tagFTGRP_4) || BOUND(?tagFTGRP_5)), ?caseWithTag284, ?UNBOUND_VARIABLE) AS ?case14) .
}
"xsd:string |
