| http://purl.uniprot.org/unirules/MF_01189#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:416113 up:source unirule:MF_01189 .
_:416114 up:source unirule:MF_01189 .
_:416115 up:source unirule:MF_01189 .
_:416116 up:source unirule:MF_01189 .
_:416117 up:source unirule:MF_01189 .
_:416118 up:source unirule:MF_01189 .
_:416119 up:source unirule:MF_01189 .
_:416120 up:source unirule:MF_01189 .
_:416121 up:source unirule:MF_01189 .
_:416122 up:source unirule:MF_01189 .
_:416123 up:source unirule:MF_01189 .
_:416124 up:source unirule:MF_01189 .
_:416125 up:source unirule:MF_01189 .
_:416126 up:source unirule:MF_01189 .
_:416127 up:source unirule:MF_01189 .
_:416128 up:source unirule:MF_01189 .
_:416129 up:source unirule:MF_01189 .
_:416130 up:source unirule:MF_01189 .
_:416131 up:source unirule:MF_01189 .
_:416132 up:source unirule:MF_01189 .
_:416133 up:source unirule:MF_01189 .
_:416134 up:source unirule:MF_01189 .
_:416135 up:source unirule:MF_01189 .
_:416136 up:source unirule:MF_01189 .
_:416137 up:source unirule:MF_01189 .
_:416138 up:source unirule:MF_01189 .
_:416139 up:source unirule:MF_01189 .
_:416140 up:source unirule:MF_01189 .
_:416141 up:source unirule:MF_01189 .
_:416142 up:source unirule:MF_01189 .
_:416143 up:source unirule:MF_01189 .
_:416144 up:source unirule:MF_01189 .
_:416145 up:source unirule:MF_01189 .
_:416146 up:source unirule:MF_01189 .
_:416147 up:source unirule:MF_01189 .
_:416148 up:source unirule:MF_01189 .
_:416149 up:source unirule:MF_01189 .
_:416150 up:source unirule:MF_01189 .
_:416151 up:source unirule:MF_01189 .
_:416152 up:source unirule:MF_01189 .
_:416153 up:source unirule:MF_01189 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation7 ,
?annotation9 ;
up:classifiedWith GO:0005886 ,
GO:0015211 ,
keyword:1003 ,
keyword:1133 ,
keyword:472 ,
keyword:50 ,
keyword:812 ,
keyword:813 ,
keyword:997 ;
up:recommendedName ?name0 .
?name0 up:fullName 'Purine ribonucleoside efflux pump NepI' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'nepI' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Involved in the efflux of purine ribonucleosides, such as inosine and guanosine.' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity .
?annotation7 a up:Subcellular_Location_Annotation .
?annotation7li8 up:cellularComponent .
?annotation9 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the major facilitator superfamily. DHA1 family. NepI (TC 2.A.1.2.26) subfamily.' .
?pfs10 up:annotation ?annotation11 .
?annotation11 faldo:begin ?pfsb12 ;
faldo:end ?pfse13 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb12 faldo:position ?thisPositionOn14 ;
rdf:type faldo:ExactPosition .
?pfse13 faldo:position ?thisPositionOn15 ;
rdf:type faldo:ExactPosition .
?pfs16 up:annotation ?annotation17 .
?annotation17 faldo:begin ?pfsb18 ;
faldo:end ?pfse19 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfse19 faldo:position ?thisPositionOn21 ;
rdf:type faldo:ExactPosition .
?pfs22 up:annotation ?annotation23 .
?annotation23 faldo:begin ?pfsb24 ;
faldo:end ?pfse25 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb24 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse25 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?pfs28 up:annotation ?annotation29 .
?annotation29 faldo:begin ?pfsb30 ;
faldo:end ?pfse31 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb30 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse31 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?pfs34 up:annotation ?annotation35 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb36 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?pfs40 up:annotation ?annotation41 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb42 faldo:position ?thisPositionOn44 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfs46 up:annotation ?annotation47 .
?annotation47 faldo:begin ?pfsb48 ;
faldo:end ?pfse49 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb48 faldo:position ?thisPositionOn50 ;
rdf:type faldo:ExactPosition .
?pfse49 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?pfs52 up:annotation ?annotation53 .
?annotation53 faldo:begin ?pfsb54 ;
faldo:end ?pfse55 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb54 faldo:position ?thisPositionOn56 ;
rdf:type faldo:ExactPosition .
?pfse55 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?pfs58 up:annotation ?annotation59 .
?annotation59 faldo:begin ?pfsb60 ;
faldo:end ?pfse61 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb60 faldo:position ?thisPositionOn62 ;
rdf:type faldo:ExactPosition .
?pfse61 faldo:position ?thisPositionOn63 ;
rdf:type faldo:ExactPosition .
?pfs64 up:annotation ?annotation65 .
?annotation65 faldo:begin ?pfsb66 ;
faldo:end ?pfse67 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb66 faldo:position ?thisPositionOn68 ;
rdf:type faldo:ExactPosition .
?pfse67 faldo:position ?thisPositionOn69 ;
rdf:type faldo:ExactPosition .
?pfs70 up:annotation ?annotation71 .
?annotation71 faldo:begin ?pfsb72 ;
faldo:end ?pfse73 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb72 faldo:position ?thisPositionOn74 ;
rdf:type faldo:ExactPosition .
?pfse73 faldo:position ?thisPositionOn75 ;
rdf:type faldo:ExactPosition .
?pfs76 up:annotation ?annotation77 .
?annotation77 faldo:begin ?pfsb78 ;
faldo:end ?pfse79 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb78 faldo:position ?thisPositionOn80 ;
rdf:type faldo:ExactPosition .
?pfse79 faldo:position ?thisPositionOn81 ;
rdf:type faldo:ExactPosition .
?pfs82 up:annotation ?annotation83 .
?annotation83 faldo:begin ?pfsb84 ;
faldo:end ?pfse85 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb84 faldo:position ?thisPositionOn86 ;
rdf:type faldo:ExactPosition .
?pfse85 faldo:position ?thisPositionOn87 ;
rdf:type faldo:ExactPosition .
?pfs88 up:annotation ?annotation89 .
?annotation89 faldo:begin ?pfsb90 ;
faldo:end ?pfse91 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb90 faldo:position ?thisPositionOn92 ;
rdf:type faldo:ExactPosition .
?pfse91 faldo:position ?thisPositionOn93 ;
rdf:type faldo:ExactPosition .
?pfs94 up:annotation ?annotation95 .
?annotation95 faldo:begin ?pfsb96 ;
faldo:end ?pfse97 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb96 faldo:position ?thisPositionOn98 ;
rdf:type faldo:ExactPosition .
?pfse97 faldo:position ?thisPositionOn99 ;
rdf:type faldo:ExactPosition .
?pfs100 up:annotation ?annotation101 .
?annotation101 faldo:begin ?pfsb102 ;
faldo:end ?pfse103 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb102 faldo:position ?thisPositionOn104 ;
rdf:type faldo:ExactPosition .
?pfse103 faldo:position ?thisPositionOn105 ;
rdf:type faldo:ExactPosition .
?pfs106 up:annotation ?annotation107 .
?annotation107 faldo:begin ?pfsb108 ;
faldo:end ?pfse109 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb108 faldo:position ?thisPositionOn110 ;
rdf:type faldo:ExactPosition .
?pfse109 faldo:position ?thisPositionOn111 ;
rdf:type faldo:ExactPosition .
?pfs112 up:annotation ?annotation113 .
?annotation113 faldo:begin ?pfsb114 ;
faldo:end ?pfse115 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb114 faldo:position ?thisPositionOn116 ;
rdf:type faldo:ExactPosition .
?pfse115 faldo:position ?thisPositionOn117 ;
rdf:type faldo:ExactPosition .
?pfs118 up:annotation ?annotation119 .
?annotation119 faldo:begin ?pfsb120 ;
faldo:end ?pfse121 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb120 faldo:position ?thisPositionOn122 ;
rdf:type faldo:ExactPosition .
?pfse121 faldo:position ?thisPositionOn123 ;
rdf:type faldo:ExactPosition .
?pfs124 up:annotation ?annotation125 .
?annotation125 faldo:begin ?pfsb126 ;
faldo:end ?pfse127 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb126 faldo:position ?thisPositionOn128 ;
rdf:type faldo:ExactPosition .
?pfse127 faldo:position ?thisPositionOn129 ;
rdf:type faldo:ExactPosition .
?pfs130 up:annotation ?annotation131 .
?annotation131 faldo:begin ?pfsb132 ;
faldo:end ?pfse133 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb132 faldo:position ?thisPositionOn134 ;
rdf:type faldo:ExactPosition .
?pfse133 faldo:position ?thisPositionOn135 ;
rdf:type faldo:ExactPosition .
?pfs136 up:annotation ?annotation137 .
?annotation137 faldo:begin ?pfsb138 ;
faldo:end ?pfse139 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb138 faldo:position ?thisPositionOn140 ;
rdf:type faldo:ExactPosition .
?pfse139 faldo:position ?thisPositionOn141 ;
rdf:type faldo:ExactPosition .
?pfs142 up:annotation ?annotation143 .
?annotation143 faldo:begin ?pfsb144 ;
faldo:end ?pfse145 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Periplasmic' .
?pfsb144 faldo:position ?thisPositionOn146 ;
rdf:type faldo:ExactPosition .
?pfse145 faldo:position ?thisPositionOn147 ;
rdf:type faldo:ExactPosition .
?pfs148 up:annotation ?annotation149 .
?annotation149 faldo:begin ?pfsb150 ;
faldo:end ?pfse151 ;
rdf:type up:Transmembrane_Annotation ;
rdfs:comment 'Helical' .
?pfsb150 faldo:position ?thisPositionOn152 ;
rdf:type faldo:ExactPosition .
?pfse151 faldo:position ?thisPositionOn153 ;
rdf:type faldo:ExactPosition .
?pfs154 up:annotation ?annotation155 .
?annotation155 faldo:begin ?pfsb156 ;
faldo:end ?pfse157 ;
rdf:type up:Topological_Domain_Annotation ;
rdfs:comment 'Cytoplasmic' .
?pfsb156 faldo:position ?thisPositionOn158 ;
rdf:type faldo:ExactPosition .
?pfse157 faldo:position ?thisPositionOn159 ;
rdf:type faldo:ExactPosition .
_:416154 a rdf:Statement ;
up:attribution _:416113 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:416155 a rdf:Statement ;
up:attribution _:416114 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:416156 a rdf:Statement ;
up:attribution _:416115 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
_:416157 a rdf:Statement ;
up:attribution _:416116 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:416158 a rdf:Statement ;
up:attribution _:416117 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:416159 a rdf:Statement ;
up:attribution _:416118 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:416160 a rdf:Statement ;
up:attribution _:416119 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:416161 a rdf:Statement ;
up:attribution _:416120 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:50 .
_:416162 a rdf:Statement ;
up:attribution _:416121 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1003 .
_:416163 a rdf:Statement ;
up:attribution _:416122 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:997 .
_:416164 a rdf:Statement ;
up:attribution _:416123 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:472 .
_:416165 a rdf:Statement ;
up:attribution _:416124 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:812 .
_:416166 a rdf:Statement ;
up:attribution _:416125 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:813 .
_:416167 a rdf:Statement ;
up:attribution _:416126 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:1133 .
_:416168 a rdf:Statement ;
up:attribution _:416127 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0015211 .
_:416169 a rdf:Statement ;
up:attribution _:416128 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005886 .
_:416170 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:416171 a rdf:Statement ;
up:attribution _:416129 ;
rdf:subject ?pfs10 ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:416172 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:416173 a rdf:Statement ;
up:attribution _:416130 ;
rdf:subject ?pfs16 ;
rdf:predicate up:annotation ;
rdf:object ?annotation17 .
_:416174 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:416175 a rdf:Statement ;
up:attribution _:416131 ;
rdf:subject ?pfs22 ;
rdf:predicate up:annotation ;
rdf:object ?annotation23 .
_:416176 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:416177 a rdf:Statement ;
up:attribution _:416132 ;
rdf:subject ?pfs28 ;
rdf:predicate up:annotation ;
rdf:object ?annotation29 .
_:416178 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
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rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:416180 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
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rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:416182 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs46 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:416183 a rdf:Statement ;
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rdf:subject ?pfs46 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:416184 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:416185 a rdf:Statement ;
up:attribution _:416136 ;
rdf:subject ?pfs52 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:416186 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs58 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
_:416187 a rdf:Statement ;
up:attribution _:416137 ;
rdf:subject ?pfs58 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
_:416188 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs64 ;
rdf:predicate up:annotation ;
rdf:object ?annotation65 .
_:416189 a rdf:Statement ;
up:attribution _:416138 ;
rdf:subject ?pfs64 ;
rdf:predicate up:annotation ;
rdf:object ?annotation65 .
_:416190 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:416191 a rdf:Statement ;
up:attribution _:416139 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:416192 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs76 ;
rdf:predicate up:annotation ;
rdf:object ?annotation77 .
_:416193 a rdf:Statement ;
up:attribution _:416140 ;
rdf:subject ?pfs76 ;
rdf:predicate up:annotation ;
rdf:object ?annotation77 .
_:416194 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs82 ;
rdf:predicate up:annotation ;
rdf:object ?annotation83 .
_:416195 a rdf:Statement ;
up:attribution _:416141 ;
rdf:subject ?pfs82 ;
rdf:predicate up:annotation ;
rdf:object ?annotation83 .
_:416196 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs88 ;
rdf:predicate up:annotation ;
rdf:object ?annotation89 .
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up:attribution _:416142 ;
rdf:subject ?pfs88 ;
rdf:predicate up:annotation ;
rdf:object ?annotation89 .
_:416198 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs94 ;
rdf:predicate up:annotation ;
rdf:object ?annotation95 .
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up:attribution _:416143 ;
rdf:subject ?pfs94 ;
rdf:predicate up:annotation ;
rdf:object ?annotation95 .
_:416200 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs100 ;
rdf:predicate up:annotation ;
rdf:object ?annotation101 .
_:416201 a rdf:Statement ;
up:attribution _:416144 ;
rdf:subject ?pfs100 ;
rdf:predicate up:annotation ;
rdf:object ?annotation101 .
_:416202 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs106 ;
rdf:predicate up:annotation ;
rdf:object ?annotation107 .
_:416203 a rdf:Statement ;
up:attribution _:416145 ;
rdf:subject ?pfs106 ;
rdf:predicate up:annotation ;
rdf:object ?annotation107 .
_:416204 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs112 ;
rdf:predicate up:annotation ;
rdf:object ?annotation113 .
_:416205 a rdf:Statement ;
up:attribution _:416146 ;
rdf:subject ?pfs112 ;
rdf:predicate up:annotation ;
rdf:object ?annotation113 .
_:416206 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs118 ;
rdf:predicate up:annotation ;
rdf:object ?annotation119 .
_:416207 a rdf:Statement ;
up:attribution _:416147 ;
rdf:subject ?pfs118 ;
rdf:predicate up:annotation ;
rdf:object ?annotation119 .
_:416208 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs124 ;
rdf:predicate up:annotation ;
rdf:object ?annotation125 .
_:416209 a rdf:Statement ;
up:attribution _:416148 ;
rdf:subject ?pfs124 ;
rdf:predicate up:annotation ;
rdf:object ?annotation125 .
_:416210 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs130 ;
rdf:predicate up:annotation ;
rdf:object ?annotation131 .
_:416211 a rdf:Statement ;
up:attribution _:416149 ;
rdf:subject ?pfs130 ;
rdf:predicate up:annotation ;
rdf:object ?annotation131 .
_:416212 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs136 ;
rdf:predicate up:annotation ;
rdf:object ?annotation137 .
_:416213 a rdf:Statement ;
up:attribution _:416150 ;
rdf:subject ?pfs136 ;
rdf:predicate up:annotation ;
rdf:object ?annotation137 .
_:416214 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs142 ;
rdf:predicate up:annotation ;
rdf:object ?annotation143 .
_:416215 a rdf:Statement ;
up:attribution _:416151 ;
rdf:subject ?pfs142 ;
rdf:predicate up:annotation ;
rdf:object ?annotation143 .
_:416216 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs148 ;
rdf:predicate up:annotation ;
rdf:object ?annotation149 .
_:416217 a rdf:Statement ;
up:attribution _:416152 ;
rdf:subject ?pfs148 ;
rdf:predicate up:annotation ;
rdf:object ?annotation149 .
_:416218 a rdf:Statement ;
up:source unirule:MF_01189 ;
rdf:subject ?pfs154 ;
rdf:predicate up:annotation ;
rdf:object ?annotation155 .
_:416219 a rdf:Statement ;
up:attribution _:416153 ;
rdf:subject ?pfs154 ;
rdf:predicate up:annotation ;
rdf:object ?annotation155 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01189
#Rule MF_01189 Created by:? on:2007-06-08 Modified by:Edouard de Castro on:2024-09-03
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01189 .
?thisOrganism rdfs:subClassOf+ taxon:543 .
BIND(URI(CONCAT(STR(?this), '#MF_01189a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a9')) AS ?annotation9) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch164 faldo:location ?templateMotifSequenceMatchRegionP0ADL1165 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1167 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189160 .
?templateMotifSequenceMatchRegionP0ADL1165 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1166 .
?templateMotifSequenceMatchBeginP0ADL1166 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1161 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1167 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch168 faldo:location ?targetMotifMatchRegionMatch169 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189171 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189162 .
?targetMotifMatchRegionMatch169 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189170 .
?targetMotifMatchRegionMatchBeginMF_01189170 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189163 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189171 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(1 AS ?thisPositionOn14) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189160, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189160) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189160, CONCAT('^(?:-*[^-]){', STR(((21 - ?templateMotifSequenceMatchBeginPositionP0ADL1161) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1172) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189162, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189162) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189162, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189162) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189162, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1172), '}'), '')))), '[^-]', ''))) AS ?step2173) .
BIND(((?step2173 + ?targetMotifMatchRegionMatchBeginPositionMF_01189163) - 1) AS ?thisPositionOn15) .
BIND(?this AS ?pfs1t174) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn14))) AS ?pfsb12) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn15))) AS ?pfse13) .
FILTER ((BOUND(?thisPositionOn14) && BOUND(?thisPositionOn15))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a11')) AS ?annotation11) .
BIND(?this AS ?pfs10) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch179 faldo:location ?templateMotifSequenceMatchRegionP0ADL1180 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1182 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189175 .
?templateMotifSequenceMatchRegionP0ADL1180 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1181 .
?templateMotifSequenceMatchBeginP0ADL1181 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1176 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1182 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch183 faldo:location ?targetMotifMatchRegionMatch184 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189186 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189177 .
?targetMotifMatchRegionMatch184 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189185 .
?targetMotifMatchRegionMatchBeginMF_01189185 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189178 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189186 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189175, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189175) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189175, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionP0ADL1176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1187) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189177, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189177) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189177, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189177) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1187), '}'), '')))), '[^-]', ''))) AS ?step2188) .
BIND(((?step2188 + ?targetMotifMatchRegionMatchBeginPositionMF_01189178) - 1) AS ?thisPositionOn20) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189175, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189175) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189175, CONCAT('^(?:-*[^-]){', STR(((42 - ?templateMotifSequenceMatchBeginPositionP0ADL1176) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1189) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189177, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189177) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189177, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189177) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189177, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), '')))), '[^-]', ''))) AS ?step2190) .
BIND(((?step2190 + ?targetMotifMatchRegionMatchBeginPositionMF_01189178) - 1) AS ?thisPositionOn21) .
BIND(?this AS ?pfs1t191) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfsb18) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn21))) AS ?pfse19) .
FILTER ((BOUND(?thisPositionOn20) && BOUND(?thisPositionOn21))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a17')) AS ?annotation17) .
BIND(?this AS ?pfs16) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch196 faldo:location ?templateMotifSequenceMatchRegionP0ADL1197 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1199 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189192 .
?templateMotifSequenceMatchRegionP0ADL1197 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1198 .
?templateMotifSequenceMatchBeginP0ADL1198 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1193 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1199 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch200 faldo:location ?targetMotifMatchRegionMatch201 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189203 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189194 .
?targetMotifMatchRegionMatch201 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189202 .
?targetMotifMatchRegionMatchBeginMF_01189202 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189195 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189203 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189192, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189192) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189192, CONCAT('^(?:-*[^-]){', STR(((43 - ?templateMotifSequenceMatchBeginPositionP0ADL1193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1204) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189194, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189194) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189194, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189194) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), '')))), '[^-]', ''))) AS ?step2205) .
BIND(((?step2205 + ?targetMotifMatchRegionMatchBeginPositionMF_01189195) - 1) AS ?thisPositionOn26) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189192, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189192) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189192, CONCAT('^(?:-*[^-]){', STR(((54 - ?templateMotifSequenceMatchBeginPositionP0ADL1193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1206) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189194, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189194) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189194, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189194) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), '')))), '[^-]', ''))) AS ?step2207) .
BIND(((?step2207 + ?targetMotifMatchRegionMatchBeginPositionMF_01189195) - 1) AS ?thisPositionOn27) .
BIND(?this AS ?pfs1t208) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb24) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse25) .
FILTER ((BOUND(?thisPositionOn26) && BOUND(?thisPositionOn27))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a23')) AS ?annotation23) .
BIND(?this AS ?pfs22) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch213 faldo:location ?templateMotifSequenceMatchRegionP0ADL1214 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1216 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189209 .
?templateMotifSequenceMatchRegionP0ADL1214 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1215 .
?templateMotifSequenceMatchBeginP0ADL1215 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1210 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1216 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch217 faldo:location ?targetMotifMatchRegionMatch218 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189220 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189211 .
?targetMotifMatchRegionMatch218 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189219 .
?targetMotifMatchRegionMatchBeginMF_01189219 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189212 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189220 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189209, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189209) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189209, CONCAT('^(?:-*[^-]){', STR(((55 - ?templateMotifSequenceMatchBeginPositionP0ADL1210) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1221) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189211, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189211) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189211, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189211) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1221), '}'), '')))), '[^-]', ''))) AS ?step2222) .
BIND(((?step2222 + ?targetMotifMatchRegionMatchBeginPositionMF_01189212) - 1) AS ?thisPositionOn32) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189209, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189209) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189209, CONCAT('^(?:-*[^-]){', STR(((75 - ?templateMotifSequenceMatchBeginPositionP0ADL1210) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1223) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189211, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189211) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1223), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189211, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189211) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189211, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1223), '}'), '')))), '[^-]', ''))) AS ?step2224) .
BIND(((?step2224 + ?targetMotifMatchRegionMatchBeginPositionMF_01189212) - 1) AS ?thisPositionOn33) .
BIND(?this AS ?pfs1t225) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb30) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse31) .
FILTER ((BOUND(?thisPositionOn32) && BOUND(?thisPositionOn33))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a29')) AS ?annotation29) .
BIND(?this AS ?pfs28) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch230 faldo:location ?templateMotifSequenceMatchRegionP0ADL1231 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1233 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189226 .
?templateMotifSequenceMatchRegionP0ADL1231 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1232 .
?templateMotifSequenceMatchBeginP0ADL1232 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1227 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1233 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch234 faldo:location ?targetMotifMatchRegionMatch235 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189237 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189228 .
?targetMotifMatchRegionMatch235 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189236 .
?targetMotifMatchRegionMatchBeginMF_01189236 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189229 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189237 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189226, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189226) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189226, CONCAT('^(?:-*[^-]){', STR(((76 - ?templateMotifSequenceMatchBeginPositionP0ADL1227) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1238) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189228, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189228) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1238), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189228, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189228) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1238), '}'), '')))), '[^-]', ''))) AS ?step2239) .
BIND(((?step2239 + ?targetMotifMatchRegionMatchBeginPositionMF_01189229) - 1) AS ?thisPositionOn38) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189226, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189226) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189226, CONCAT('^(?:-*[^-]){', STR(((85 - ?templateMotifSequenceMatchBeginPositionP0ADL1227) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1240) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189228, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189228) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189228, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189228) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189228, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1240), '}'), '')))), '[^-]', ''))) AS ?step2241) .
BIND(((?step2241 + ?targetMotifMatchRegionMatchBeginPositionMF_01189229) - 1) AS ?thisPositionOn39) .
BIND(?this AS ?pfs1t242) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse37) .
FILTER ((BOUND(?thisPositionOn38) && BOUND(?thisPositionOn39))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a35')) AS ?annotation35) .
BIND(?this AS ?pfs34) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch247 faldo:location ?templateMotifSequenceMatchRegionP0ADL1248 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1250 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189243 .
?templateMotifSequenceMatchRegionP0ADL1248 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1249 .
?templateMotifSequenceMatchBeginP0ADL1249 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1244 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1250 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch251 faldo:location ?targetMotifMatchRegionMatch252 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189254 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189245 .
?targetMotifMatchRegionMatch252 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189253 .
?targetMotifMatchRegionMatchBeginMF_01189253 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189246 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189254 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189243, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189243) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189243, CONCAT('^(?:-*[^-]){', STR(((86 - ?templateMotifSequenceMatchBeginPositionP0ADL1244) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1255) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189245, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189245) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1255), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189245, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189245) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1255), '}'), '')))), '[^-]', ''))) AS ?step2256) .
BIND(((?step2256 + ?targetMotifMatchRegionMatchBeginPositionMF_01189246) - 1) AS ?thisPositionOn44) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189243, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189243) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189243, CONCAT('^(?:-*[^-]){', STR(((106 - ?templateMotifSequenceMatchBeginPositionP0ADL1244) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1257) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189245, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189245) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1257), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189245, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189245) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189245, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1257), '}'), '')))), '[^-]', ''))) AS ?step2258) .
BIND(((?step2258 + ?targetMotifMatchRegionMatchBeginPositionMF_01189246) - 1) AS ?thisPositionOn45) .
BIND(?this AS ?pfs1t259) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn44))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfse43) .
FILTER ((BOUND(?thisPositionOn44) && BOUND(?thisPositionOn45))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a41')) AS ?annotation41) .
BIND(?this AS ?pfs40) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch264 faldo:location ?templateMotifSequenceMatchRegionP0ADL1265 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1267 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189260 .
?templateMotifSequenceMatchRegionP0ADL1265 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1266 .
?templateMotifSequenceMatchBeginP0ADL1266 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1261 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1267 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch268 faldo:location ?targetMotifMatchRegionMatch269 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189271 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189262 .
?targetMotifMatchRegionMatch269 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189270 .
?targetMotifMatchRegionMatchBeginMF_01189270 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189263 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189271 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189260, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189260) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189260, CONCAT('^(?:-*[^-]){', STR(((107 - ?templateMotifSequenceMatchBeginPositionP0ADL1261) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1272) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189262, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189262) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189262, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189262) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189262, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), '')))), '[^-]', ''))) AS ?step2273) .
BIND(((?step2273 + ?targetMotifMatchRegionMatchBeginPositionMF_01189263) - 1) AS ?thisPositionOn50) .
BIND(?thisPositionOn50 AS ?thisPositionOn51) .
BIND(?this AS ?pfs1t274) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfsb48) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfse49) .
FILTER (BOUND(?thisPositionOn50)) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a47')) AS ?annotation47) .
BIND(?this AS ?pfs46) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch279 faldo:location ?templateMotifSequenceMatchRegionP0ADL1280 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1282 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189275 .
?templateMotifSequenceMatchRegionP0ADL1280 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1281 .
?templateMotifSequenceMatchBeginP0ADL1281 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1276 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1282 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch283 faldo:location ?targetMotifMatchRegionMatch284 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189286 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189277 .
?targetMotifMatchRegionMatch284 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189285 .
?targetMotifMatchRegionMatchBeginMF_01189285 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189278 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189286 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189275, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189275) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189275, CONCAT('^(?:-*[^-]){', STR(((108 - ?templateMotifSequenceMatchBeginPositionP0ADL1276) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1287) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189277, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189277, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1287), '}'), '')))), '[^-]', ''))) AS ?step2288) .
BIND(((?step2288 + ?targetMotifMatchRegionMatchBeginPositionMF_01189278) - 1) AS ?thisPositionOn56) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189275, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189275) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189275, CONCAT('^(?:-*[^-]){', STR(((128 - ?templateMotifSequenceMatchBeginPositionP0ADL1276) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1289) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189277, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1289), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189277, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189277) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189277, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1289), '}'), '')))), '[^-]', ''))) AS ?step2290) .
BIND(((?step2290 + ?targetMotifMatchRegionMatchBeginPositionMF_01189278) - 1) AS ?thisPositionOn57) .
BIND(?this AS ?pfs1t291) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse55) .
FILTER ((BOUND(?thisPositionOn56) && BOUND(?thisPositionOn57))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a53')) AS ?annotation53) .
BIND(?this AS ?pfs52) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch296 faldo:location ?templateMotifSequenceMatchRegionP0ADL1297 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1299 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189292 .
?templateMotifSequenceMatchRegionP0ADL1297 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1298 .
?templateMotifSequenceMatchBeginP0ADL1298 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1293 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1299 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch300 faldo:location ?targetMotifMatchRegionMatch301 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189303 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189294 .
?targetMotifMatchRegionMatch301 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189302 .
?targetMotifMatchRegionMatchBeginMF_01189302 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189295 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189303 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189292, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189292) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189292, CONCAT('^(?:-*[^-]){', STR(((129 - ?templateMotifSequenceMatchBeginPositionP0ADL1293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1304) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189294, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189294) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189294, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189294) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1304), '}'), '')))), '[^-]', ''))) AS ?step2305) .
BIND(((?step2305 + ?targetMotifMatchRegionMatchBeginPositionMF_01189295) - 1) AS ?thisPositionOn62) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189292, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189292) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189292, CONCAT('^(?:-*[^-]){', STR(((147 - ?templateMotifSequenceMatchBeginPositionP0ADL1293) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1306) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189294, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189294) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1306), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189294, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189294) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189294, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1306), '}'), '')))), '[^-]', ''))) AS ?step2307) .
BIND(((?step2307 + ?targetMotifMatchRegionMatchBeginPositionMF_01189295) - 1) AS ?thisPositionOn63) .
BIND(?this AS ?pfs1t308) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfsb60) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfse61) .
FILTER ((BOUND(?thisPositionOn62) && BOUND(?thisPositionOn63))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a59')) AS ?annotation59) .
BIND(?this AS ?pfs58) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch313 faldo:location ?templateMotifSequenceMatchRegionP0ADL1314 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1316 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189309 .
?templateMotifSequenceMatchRegionP0ADL1314 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1315 .
?templateMotifSequenceMatchBeginP0ADL1315 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1310 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1316 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch317 faldo:location ?targetMotifMatchRegionMatch318 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189320 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189311 .
?targetMotifMatchRegionMatch318 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189319 .
?targetMotifMatchRegionMatchBeginMF_01189319 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189312 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189320 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189309, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189309) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189309, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionP0ADL1310) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1321) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189311, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189311) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189311, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1321), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189311, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189311) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189311, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1321), '}'), '')))), '[^-]', ''))) AS ?step2322) .
BIND(((?step2322 + ?targetMotifMatchRegionMatchBeginPositionMF_01189312) - 1) AS ?thisPositionOn68) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189309, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189309) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189309, CONCAT('^(?:-*[^-]){', STR(((168 - ?templateMotifSequenceMatchBeginPositionP0ADL1310) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1323) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189311, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189311) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189311, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1323), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189311, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189311) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189311, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1323), '}'), '')))), '[^-]', ''))) AS ?step2324) .
BIND(((?step2324 + ?targetMotifMatchRegionMatchBeginPositionMF_01189312) - 1) AS ?thisPositionOn69) .
BIND(?this AS ?pfs1t325) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb66) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse67) .
FILTER ((BOUND(?thisPositionOn68) && BOUND(?thisPositionOn69))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a65')) AS ?annotation65) .
BIND(?this AS ?pfs64) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch330 faldo:location ?templateMotifSequenceMatchRegionP0ADL1331 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1333 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189326 .
?templateMotifSequenceMatchRegionP0ADL1331 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1332 .
?templateMotifSequenceMatchBeginP0ADL1332 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1327 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1333 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch334 faldo:location ?targetMotifMatchRegionMatch335 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189337 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189328 .
?targetMotifMatchRegionMatch335 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189336 .
?targetMotifMatchRegionMatchBeginMF_01189336 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189329 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189337 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189326, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189326) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189326, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionP0ADL1327) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1338) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189328, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189328) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189328, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1338), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189328, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189328) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189328, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1338), '}'), '')))), '[^-]', ''))) AS ?step2339) .
BIND(((?step2339 + ?targetMotifMatchRegionMatchBeginPositionMF_01189329) - 1) AS ?thisPositionOn74) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189326, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189326) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189326, CONCAT('^(?:-*[^-]){', STR(((175 - ?templateMotifSequenceMatchBeginPositionP0ADL1327) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1340) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189328, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189328) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189328, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1340), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189328, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189328) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189328, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1340), '}'), '')))), '[^-]', ''))) AS ?step2341) .
BIND(((?step2341 + ?targetMotifMatchRegionMatchBeginPositionMF_01189329) - 1) AS ?thisPositionOn75) .
BIND(?this AS ?pfs1t342) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfsb72) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfse73) .
FILTER ((BOUND(?thisPositionOn74) && BOUND(?thisPositionOn75))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a71')) AS ?annotation71) .
BIND(?this AS ?pfs70) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch347 faldo:location ?templateMotifSequenceMatchRegionP0ADL1348 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1350 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189343 .
?templateMotifSequenceMatchRegionP0ADL1348 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1349 .
?templateMotifSequenceMatchBeginP0ADL1349 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1344 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1350 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch351 faldo:location ?targetMotifMatchRegionMatch352 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189354 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189345 .
?targetMotifMatchRegionMatch352 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189353 .
?targetMotifMatchRegionMatchBeginMF_01189353 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189346 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189354 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189343, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189343) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189343, CONCAT('^(?:-*[^-]){', STR(((176 - ?templateMotifSequenceMatchBeginPositionP0ADL1344) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1355) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189345, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189345) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189345, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1355), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189345, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189345) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189345, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1355), '}'), '')))), '[^-]', ''))) AS ?step2356) .
BIND(((?step2356 + ?targetMotifMatchRegionMatchBeginPositionMF_01189346) - 1) AS ?thisPositionOn80) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189343, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189343) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189343, CONCAT('^(?:-*[^-]){', STR(((196 - ?templateMotifSequenceMatchBeginPositionP0ADL1344) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1357) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189345, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189345) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189345, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1357), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189345, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189345) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189345, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1357), '}'), '')))), '[^-]', ''))) AS ?step2358) .
BIND(((?step2358 + ?targetMotifMatchRegionMatchBeginPositionMF_01189346) - 1) AS ?thisPositionOn81) .
BIND(?this AS ?pfs1t359) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb78) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse79) .
FILTER ((BOUND(?thisPositionOn80) && BOUND(?thisPositionOn81))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a77')) AS ?annotation77) .
BIND(?this AS ?pfs76) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch364 faldo:location ?templateMotifSequenceMatchRegionP0ADL1365 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1367 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189360 .
?templateMotifSequenceMatchRegionP0ADL1365 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1366 .
?templateMotifSequenceMatchBeginP0ADL1366 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1361 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1367 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch368 faldo:location ?targetMotifMatchRegionMatch369 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189371 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189362 .
?targetMotifMatchRegionMatch369 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189370 .
?targetMotifMatchRegionMatchBeginMF_01189370 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189363 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189371 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189360, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189360) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189360, CONCAT('^(?:-*[^-]){', STR(((197 - ?templateMotifSequenceMatchBeginPositionP0ADL1361) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1372) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189362, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189362) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189362, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1372), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189362, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189362) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189362, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1372), '}'), '')))), '[^-]', ''))) AS ?step2373) .
BIND(((?step2373 + ?targetMotifMatchRegionMatchBeginPositionMF_01189363) - 1) AS ?thisPositionOn86) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189360, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189360) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189360, CONCAT('^(?:-*[^-]){', STR(((215 - ?templateMotifSequenceMatchBeginPositionP0ADL1361) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1374) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189362, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189362) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189362, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1374), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189362, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189362) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189362, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1374), '}'), '')))), '[^-]', ''))) AS ?step2375) .
BIND(((?step2375 + ?targetMotifMatchRegionMatchBeginPositionMF_01189363) - 1) AS ?thisPositionOn87) .
BIND(?this AS ?pfs1t376) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn86))) AS ?pfsb84) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfse85) .
FILTER ((BOUND(?thisPositionOn86) && BOUND(?thisPositionOn87))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a83')) AS ?annotation83) .
BIND(?this AS ?pfs82) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch381 faldo:location ?templateMotifSequenceMatchRegionP0ADL1382 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1384 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189377 .
?templateMotifSequenceMatchRegionP0ADL1382 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1383 .
?templateMotifSequenceMatchBeginP0ADL1383 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1378 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1384 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch385 faldo:location ?targetMotifMatchRegionMatch386 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189388 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189379 .
?targetMotifMatchRegionMatch386 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189387 .
?targetMotifMatchRegionMatchBeginMF_01189387 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189380 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189388 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189377, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189377) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189377, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionP0ADL1378) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1389) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189379, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189379) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189379, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1389), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189379, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189379) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189379, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1389), '}'), '')))), '[^-]', ''))) AS ?step2390) .
BIND(((?step2390 + ?targetMotifMatchRegionMatchBeginPositionMF_01189380) - 1) AS ?thisPositionOn92) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189377, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189377) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189377, CONCAT('^(?:-*[^-]){', STR(((236 - ?templateMotifSequenceMatchBeginPositionP0ADL1378) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1391) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189379, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189379) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189379, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1391), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189379, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189379) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189379, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1391), '}'), '')))), '[^-]', ''))) AS ?step2392) .
BIND(((?step2392 + ?targetMotifMatchRegionMatchBeginPositionMF_01189380) - 1) AS ?thisPositionOn93) .
BIND(?this AS ?pfs1t393) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfsb90) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn93))) AS ?pfse91) .
FILTER ((BOUND(?thisPositionOn92) && BOUND(?thisPositionOn93))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a89')) AS ?annotation89) .
BIND(?this AS ?pfs88) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch398 faldo:location ?templateMotifSequenceMatchRegionP0ADL1399 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1401 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189394 .
?templateMotifSequenceMatchRegionP0ADL1399 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1400 .
?templateMotifSequenceMatchBeginP0ADL1400 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1395 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1401 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch402 faldo:location ?targetMotifMatchRegionMatch403 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189405 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189396 .
?targetMotifMatchRegionMatch403 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189404 .
?targetMotifMatchRegionMatchBeginMF_01189404 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189397 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189405 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189394, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189394) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189394, CONCAT('^(?:-*[^-]){', STR(((237 - ?templateMotifSequenceMatchBeginPositionP0ADL1395) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1406) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189396, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189396) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1406), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189396, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189396) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1406), '}'), '')))), '[^-]', ''))) AS ?step2407) .
BIND(((?step2407 + ?targetMotifMatchRegionMatchBeginPositionMF_01189397) - 1) AS ?thisPositionOn98) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189394, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189394) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189394, CONCAT('^(?:-*[^-]){', STR(((255 - ?templateMotifSequenceMatchBeginPositionP0ADL1395) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1408) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189396, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189396) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1408), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189396, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189396) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189396, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1408), '}'), '')))), '[^-]', ''))) AS ?step2409) .
BIND(((?step2409 + ?targetMotifMatchRegionMatchBeginPositionMF_01189397) - 1) AS ?thisPositionOn99) .
BIND(?this AS ?pfs1t410) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfsb96) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfse97) .
FILTER ((BOUND(?thisPositionOn98) && BOUND(?thisPositionOn99))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a95')) AS ?annotation95) .
BIND(?this AS ?pfs94) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch415 faldo:location ?templateMotifSequenceMatchRegionP0ADL1416 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1418 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189411 .
?templateMotifSequenceMatchRegionP0ADL1416 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1417 .
?templateMotifSequenceMatchBeginP0ADL1417 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1412 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1418 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch419 faldo:location ?targetMotifMatchRegionMatch420 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189422 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189413 .
?targetMotifMatchRegionMatch420 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189421 .
?targetMotifMatchRegionMatchBeginMF_01189421 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189414 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189422 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189411, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189411) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189411, CONCAT('^(?:-*[^-]){', STR(((256 - ?templateMotifSequenceMatchBeginPositionP0ADL1412) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1423) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189413, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189413, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1423), '}'), '')))), '[^-]', ''))) AS ?step2424) .
BIND(((?step2424 + ?targetMotifMatchRegionMatchBeginPositionMF_01189414) - 1) AS ?thisPositionOn104) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189411, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189411) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189411, CONCAT('^(?:-*[^-]){', STR(((276 - ?templateMotifSequenceMatchBeginPositionP0ADL1412) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1425) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189413, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189413, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189413) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189413, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), '')))), '[^-]', ''))) AS ?step2426) .
BIND(((?step2426 + ?targetMotifMatchRegionMatchBeginPositionMF_01189414) - 1) AS ?thisPositionOn105) .
BIND(?this AS ?pfs1t427) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfsb102) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfse103) .
FILTER ((BOUND(?thisPositionOn104) && BOUND(?thisPositionOn105))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a101')) AS ?annotation101) .
BIND(?this AS ?pfs100) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch432 faldo:location ?templateMotifSequenceMatchRegionP0ADL1433 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1435 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189428 .
?templateMotifSequenceMatchRegionP0ADL1433 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1434 .
?templateMotifSequenceMatchBeginP0ADL1434 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1429 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1435 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch436 faldo:location ?targetMotifMatchRegionMatch437 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189439 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189430 .
?targetMotifMatchRegionMatch437 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189438 .
?targetMotifMatchRegionMatchBeginMF_01189438 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189431 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189439 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189428, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189428) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189428, CONCAT('^(?:-*[^-]){', STR(((277 - ?templateMotifSequenceMatchBeginPositionP0ADL1429) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1440) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189430, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189430) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189430, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189430) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), '')))), '[^-]', ''))) AS ?step2441) .
BIND(((?step2441 + ?targetMotifMatchRegionMatchBeginPositionMF_01189431) - 1) AS ?thisPositionOn110) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189428, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189428) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189428, CONCAT('^(?:-*[^-]){', STR(((281 - ?templateMotifSequenceMatchBeginPositionP0ADL1429) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1442) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189430, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189430) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1442), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189430, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189430) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1442), '}'), '')))), '[^-]', ''))) AS ?step2443) .
BIND(((?step2443 + ?targetMotifMatchRegionMatchBeginPositionMF_01189431) - 1) AS ?thisPositionOn111) .
BIND(?this AS ?pfs1t444) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfsb108) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfse109) .
FILTER ((BOUND(?thisPositionOn110) && BOUND(?thisPositionOn111))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a107')) AS ?annotation107) .
BIND(?this AS ?pfs106) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch449 faldo:location ?templateMotifSequenceMatchRegionP0ADL1450 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1452 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189445 .
?templateMotifSequenceMatchRegionP0ADL1450 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1451 .
?templateMotifSequenceMatchBeginP0ADL1451 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1446 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1452 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch453 faldo:location ?targetMotifMatchRegionMatch454 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189456 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189447 .
?targetMotifMatchRegionMatch454 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189455 .
?targetMotifMatchRegionMatchBeginMF_01189455 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189448 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189456 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189445, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189445) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189445, CONCAT('^(?:-*[^-]){', STR(((282 - ?templateMotifSequenceMatchBeginPositionP0ADL1446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1457) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189447, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189447) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189447, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189447) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), '')))), '[^-]', ''))) AS ?step2458) .
BIND(((?step2458 + ?targetMotifMatchRegionMatchBeginPositionMF_01189448) - 1) AS ?thisPositionOn116) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189445, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189445) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189445, CONCAT('^(?:-*[^-]){', STR(((302 - ?templateMotifSequenceMatchBeginPositionP0ADL1446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1459) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189447, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189447) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189447, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189447) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), '')))), '[^-]', ''))) AS ?step2460) .
BIND(((?step2460 + ?targetMotifMatchRegionMatchBeginPositionMF_01189448) - 1) AS ?thisPositionOn117) .
BIND(?this AS ?pfs1t461) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn116))) AS ?pfsb114) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfse115) .
FILTER ((BOUND(?thisPositionOn116) && BOUND(?thisPositionOn117))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a113')) AS ?annotation113) .
BIND(?this AS ?pfs112) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch466 faldo:location ?templateMotifSequenceMatchRegionP0ADL1467 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1469 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189462 .
?templateMotifSequenceMatchRegionP0ADL1467 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1468 .
?templateMotifSequenceMatchBeginP0ADL1468 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1463 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1469 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch470 faldo:location ?targetMotifMatchRegionMatch471 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189473 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189464 .
?targetMotifMatchRegionMatch471 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189472 .
?targetMotifMatchRegionMatchBeginMF_01189472 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189465 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189473 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189462, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189462) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189462, CONCAT('^(?:-*[^-]){', STR(((303 - ?templateMotifSequenceMatchBeginPositionP0ADL1463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1474) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189464, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189464) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189464, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189464) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), '')))), '[^-]', ''))) AS ?step2475) .
BIND(((?step2475 + ?targetMotifMatchRegionMatchBeginPositionMF_01189465) - 1) AS ?thisPositionOn122) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189462, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189462) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189462, CONCAT('^(?:-*[^-]){', STR(((305 - ?templateMotifSequenceMatchBeginPositionP0ADL1463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1476) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189464, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189464) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1476), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189464, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189464) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1476), '}'), '')))), '[^-]', ''))) AS ?step2477) .
BIND(((?step2477 + ?targetMotifMatchRegionMatchBeginPositionMF_01189465) - 1) AS ?thisPositionOn123) .
BIND(?this AS ?pfs1t478) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn122))) AS ?pfsb120) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfse121) .
FILTER ((BOUND(?thisPositionOn122) && BOUND(?thisPositionOn123))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a119')) AS ?annotation119) .
BIND(?this AS ?pfs118) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch483 faldo:location ?templateMotifSequenceMatchRegionP0ADL1484 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1486 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189479 .
?templateMotifSequenceMatchRegionP0ADL1484 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1485 .
?templateMotifSequenceMatchBeginP0ADL1485 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1480 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1486 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch487 faldo:location ?targetMotifMatchRegionMatch488 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189490 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189481 .
?targetMotifMatchRegionMatch488 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189489 .
?targetMotifMatchRegionMatchBeginMF_01189489 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189482 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189490 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189479, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189479) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189479, CONCAT('^(?:-*[^-]){', STR(((306 - ?templateMotifSequenceMatchBeginPositionP0ADL1480) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1491) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189481, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189481) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1491), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189481, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189481) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1491), '}'), '')))), '[^-]', ''))) AS ?step2492) .
BIND(((?step2492 + ?targetMotifMatchRegionMatchBeginPositionMF_01189482) - 1) AS ?thisPositionOn128) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189479, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189479) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189479, CONCAT('^(?:-*[^-]){', STR(((326 - ?templateMotifSequenceMatchBeginPositionP0ADL1480) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1493) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189481, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189481) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189481, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189481) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189481, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1493), '}'), '')))), '[^-]', ''))) AS ?step2494) .
BIND(((?step2494 + ?targetMotifMatchRegionMatchBeginPositionMF_01189482) - 1) AS ?thisPositionOn129) .
BIND(?this AS ?pfs1t495) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn128))) AS ?pfsb126) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn129))) AS ?pfse127) .
FILTER ((BOUND(?thisPositionOn128) && BOUND(?thisPositionOn129))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a125')) AS ?annotation125) .
BIND(?this AS ?pfs124) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch500 faldo:location ?templateMotifSequenceMatchRegionP0ADL1501 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1503 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189496 .
?templateMotifSequenceMatchRegionP0ADL1501 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1502 .
?templateMotifSequenceMatchBeginP0ADL1502 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1497 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1503 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch504 faldo:location ?targetMotifMatchRegionMatch505 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189507 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189498 .
?targetMotifMatchRegionMatch505 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189506 .
?targetMotifMatchRegionMatchBeginMF_01189506 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189499 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189507 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189496, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189496) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189496, CONCAT('^(?:-*[^-]){', STR(((327 - ?templateMotifSequenceMatchBeginPositionP0ADL1497) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1508) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189498, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189498) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189498, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189498) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1508), '}'), '')))), '[^-]', ''))) AS ?step2509) .
BIND(((?step2509 + ?targetMotifMatchRegionMatchBeginPositionMF_01189499) - 1) AS ?thisPositionOn134) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189496, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189496) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189496, CONCAT('^(?:-*[^-]){', STR(((343 - ?templateMotifSequenceMatchBeginPositionP0ADL1497) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1510) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189498, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189498) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1510), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189498, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189498) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189498, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1510), '}'), '')))), '[^-]', ''))) AS ?step2511) .
BIND(((?step2511 + ?targetMotifMatchRegionMatchBeginPositionMF_01189499) - 1) AS ?thisPositionOn135) .
BIND(?this AS ?pfs1t512) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn134))) AS ?pfsb132) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn135))) AS ?pfse133) .
FILTER ((BOUND(?thisPositionOn134) && BOUND(?thisPositionOn135))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a131')) AS ?annotation131) .
BIND(?this AS ?pfs130) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch517 faldo:location ?templateMotifSequenceMatchRegionP0ADL1518 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1520 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189513 .
?templateMotifSequenceMatchRegionP0ADL1518 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1519 .
?templateMotifSequenceMatchBeginP0ADL1519 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1514 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1520 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch521 faldo:location ?targetMotifMatchRegionMatch522 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189524 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189515 .
?targetMotifMatchRegionMatch522 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189523 .
?targetMotifMatchRegionMatchBeginMF_01189523 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189516 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189524 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189513, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189513) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189513, CONCAT('^(?:-*[^-]){', STR(((344 - ?templateMotifSequenceMatchBeginPositionP0ADL1514) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1525) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189515, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189515) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1525), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189515, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189515) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1525), '}'), '')))), '[^-]', ''))) AS ?step2526) .
BIND(((?step2526 + ?targetMotifMatchRegionMatchBeginPositionMF_01189516) - 1) AS ?thisPositionOn140) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189513, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189513) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189513, CONCAT('^(?:-*[^-]){', STR(((364 - ?templateMotifSequenceMatchBeginPositionP0ADL1514) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1527) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189515, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189515) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1527), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189515, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189515) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189515, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1527), '}'), '')))), '[^-]', ''))) AS ?step2528) .
BIND(((?step2528 + ?targetMotifMatchRegionMatchBeginPositionMF_01189516) - 1) AS ?thisPositionOn141) .
BIND(?this AS ?pfs1t529) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn140))) AS ?pfsb138) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn141))) AS ?pfse139) .
FILTER ((BOUND(?thisPositionOn140) && BOUND(?thisPositionOn141))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a137')) AS ?annotation137) .
BIND(?this AS ?pfs136) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch534 faldo:location ?templateMotifSequenceMatchRegionP0ADL1535 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1537 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189530 .
?templateMotifSequenceMatchRegionP0ADL1535 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1536 .
?templateMotifSequenceMatchBeginP0ADL1536 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1531 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1537 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch538 faldo:location ?targetMotifMatchRegionMatch539 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189541 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189532 .
?targetMotifMatchRegionMatch539 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189540 .
?targetMotifMatchRegionMatchBeginMF_01189540 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189533 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189541 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189530, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189530) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189530, CONCAT('^(?:-*[^-]){', STR(((365 - ?templateMotifSequenceMatchBeginPositionP0ADL1531) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1542) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189532, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189532) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1542), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189532, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189532) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1542), '}'), '')))), '[^-]', ''))) AS ?step2543) .
BIND(((?step2543 + ?targetMotifMatchRegionMatchBeginPositionMF_01189533) - 1) AS ?thisPositionOn146) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189530, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189530) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189530, CONCAT('^(?:-*[^-]){', STR(((366 - ?templateMotifSequenceMatchBeginPositionP0ADL1531) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1544) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189532, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189532) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1544), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189532, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189532) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189532, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1544), '}'), '')))), '[^-]', ''))) AS ?step2545) .
BIND(((?step2545 + ?targetMotifMatchRegionMatchBeginPositionMF_01189533) - 1) AS ?thisPositionOn147) .
BIND(?this AS ?pfs1t546) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn146))) AS ?pfsb144) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn147))) AS ?pfse145) .
FILTER ((BOUND(?thisPositionOn146) && BOUND(?thisPositionOn147))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a143')) AS ?annotation143) .
BIND(?this AS ?pfs142) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch551 faldo:location ?templateMotifSequenceMatchRegionP0ADL1552 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1554 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189547 .
?templateMotifSequenceMatchRegionP0ADL1552 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1553 .
?templateMotifSequenceMatchBeginP0ADL1553 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1548 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1554 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch555 faldo:location ?targetMotifMatchRegionMatch556 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189558 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189549 .
?targetMotifMatchRegionMatch556 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189557 .
?targetMotifMatchRegionMatchBeginMF_01189557 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189550 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189558 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189547, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189547) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189547, CONCAT('^(?:-*[^-]){', STR(((367 - ?templateMotifSequenceMatchBeginPositionP0ADL1548) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1559) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189549, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189549) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189549, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1559), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189549, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189549) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189549, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1559), '}'), '')))), '[^-]', ''))) AS ?step2560) .
BIND(((?step2560 + ?targetMotifMatchRegionMatchBeginPositionMF_01189550) - 1) AS ?thisPositionOn152) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189547, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189547) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189547, CONCAT('^(?:-*[^-]){', STR(((387 - ?templateMotifSequenceMatchBeginPositionP0ADL1548) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1561) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189549, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189549) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189549, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1561), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189549, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189549) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189549, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1561), '}'), '')))), '[^-]', ''))) AS ?step2562) .
BIND(((?step2562 + ?targetMotifMatchRegionMatchBeginPositionMF_01189550) - 1) AS ?thisPositionOn153) .
BIND(?this AS ?pfs1t563) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn152))) AS ?pfsb150) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn153))) AS ?pfse151) .
FILTER ((BOUND(?thisPositionOn152) && BOUND(?thisPositionOn153))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a149')) AS ?annotation149) .
BIND(?this AS ?pfs148) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch568 faldo:location ?templateMotifSequenceMatchRegionP0ADL1569 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP0ADL1571 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP0ADL1MF_01189564 .
?templateMotifSequenceMatchRegionP0ADL1569 faldo:begin ?templateMotifSequenceMatchBeginP0ADL1570 .
?templateMotifSequenceMatchBeginP0ADL1570 faldo:position ?templateMotifSequenceMatchBeginPositionP0ADL1565 ;
faldo:reference isoform:P0ADL1-1 .
?templateMotifSequenceProfileAlignmentOperationP0ADL1571 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
?targetMotifMatch572 faldo:location ?targetMotifMatchRegionMatch573 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01189575 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP0ADL1MF_01189566 .
?targetMotifMatchRegionMatch573 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01189574 .
?targetMotifMatchRegionMatchBeginMF_01189574 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01189567 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01189575 edam:has_input signature:MF_01189 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP0ADL1MF_01189564, 1, (STRLEN(?templateMotifCigarP0ADL1MF_01189564) - STRLEN(REPLACE(?templateMotifCigarP0ADL1MF_01189564, CONCAT('^(?:-*[^-]){', STR(((388 - ?templateMotifSequenceMatchBeginPositionP0ADL1565) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1576) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189566, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189566) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189566, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1576), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP0ADL1MF_01189566, 1, (STRLEN(?targetMotifMatchCigarP0ADL1MF_01189566) - STRLEN(REPLACE(?targetMotifMatchCigarP0ADL1MF_01189566, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1576), '}'), '')))), '[^-]', ''))) AS ?step2577) .
BIND(((?step2577 + ?targetMotifMatchRegionMatchBeginPositionMF_01189567) - 1) AS ?thisPositionOn158) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn159) .
BIND(?this AS ?pfs1t578) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn158))) AS ?pfsb156) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfse157) .
FILTER ((BOUND(?thisPositionOn158) && BOUND(?thisPositionOn159))) .
BIND(URI(CONCAT(STR(?this), '#MF_01189a155')) AS ?annotation155) .
BIND(?this AS ?pfs154) .
}
}
"xsd:string |
