| http://purl.uniprot.org/unirules/MF_01968#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:690825 up:source unirule:MF_01968 .
_:690826 up:source unirule:MF_01968 .
_:690827 up:source unirule:MF_01968 .
_:690828 up:source unirule:MF_01968 .
_:690829 up:source unirule:MF_01968 .
_:690830 up:source unirule:MF_01968 .
_:690831 up:source unirule:MF_01968 .
_:690832 up:source unirule:MF_01968 .
_:690833 up:source unirule:MF_01968 .
_:690834 up:source unirule:MF_01968 .
_:690835 up:source unirule:MF_01968 .
_:690836 up:source unirule:MF_01968 .
_:690837 up:source unirule:MF_01968 .
_:690838 up:source unirule:MF_01968 .
_:690839 up:source unirule:MF_01968 .
_:690840 up:source unirule:MF_01968 .
_:690841 up:source unirule:MF_01968 .
_:690842 up:source unirule:MF_01968 .
_:690843 up:source unirule:MF_01968 .
_:690844 up:source unirule:MF_01968 .
_:690845 up:source unirule:MF_01968 .
_:690846 up:source unirule:MF_01968 .
_:690847 up:source unirule:MF_01968 .
_:690848 up:source unirule:MF_01968 .
_:690849 up:source unirule:MF_01968 .
_:690850 up:source unirule:MF_01968 .
_:690851 up:source unirule:MF_01968 .
_:690852 up:source unirule:MF_01968 .
_:690853 up:source unirule:MF_01968 .
_:690854 up:source unirule:MF_01968 .
_:690855 up:source unirule:MF_01968 .
_:690856 up:source unirule:MF_01968 .
_:690857 up:source unirule:MF_01968 .
_:690858 up:source unirule:MF_01968 .
_:690859 up:source unirule:MF_01968 .
_:690860 up:source unirule:MF_01968 .
_:690861 up:source unirule:MF_01968 .
_:690862 up:source unirule:MF_01968 .
_:690863 up:source unirule:MF_01968 .
_:690864 up:source unirule:MF_01968 .
_:690865 up:source unirule:MF_01968 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation5 ,
?annotation7 ;
up:classifiedWith GO:0005737 ,
GO:0006476 ,
GO:0034979 ,
GO:0070403 ,
keyword:520 ,
keyword:808 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '2.3.1.286' ;
up:fullName 'NAD-dependent protein deacetylase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Regulatory protein SIR2 homolog' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'cobB' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 a up:Subcellular_Location_Annotation .
?annotation5li6 up:cellularComponent .
?annotation7 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the sirtuin family. Class U subfamily.' .
?case8 up:classifiedWith GO:0008270 ,
keyword:479 ,
keyword:862 .
?case9 up:classifiedWith keyword:804 ,
keyword:805 .
?pfs11 up:annotation ?annotation12 ,
?annotation18 ,
?annotation24 ,
?annotation30 .
?annotation12 faldo:begin ?pfsb13 ;
faldo:end ?pfse14 ;
up:ligand ?ligand15 ;
rdf:type up:Binding_Site_Annotation .
?pfsb13 faldo:position ?thisPositionOn16 ;
rdf:type faldo:ExactPosition .
?pfse14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?ligand15 rdfs:subClassOf chebi:29105 .
?annotation18 faldo:begin ?pfsb19 ;
faldo:end ?pfse20 ;
up:ligand ?ligand21 ;
rdf:type up:Binding_Site_Annotation .
?pfsb19 faldo:position ?thisPositionOn22 ;
rdf:type faldo:ExactPosition .
?pfse20 faldo:position ?thisPositionOn23 ;
rdf:type faldo:ExactPosition .
?ligand21 rdfs:subClassOf chebi:29105 .
?annotation24 faldo:begin ?pfsb25 ;
faldo:end ?pfse26 ;
up:ligand ?ligand27 ;
rdf:type up:Binding_Site_Annotation .
?pfsb25 faldo:position ?thisPositionOn28 ;
rdf:type faldo:ExactPosition .
?pfse26 faldo:position ?thisPositionOn29 ;
rdf:type faldo:ExactPosition .
?ligand27 rdfs:subClassOf chebi:29105 .
?annotation30 faldo:begin ?pfsb31 ;
faldo:end ?pfse32 ;
up:ligand ?ligand33 ;
rdf:type up:Binding_Site_Annotation .
?pfsb31 faldo:position ?thisPositionOn34 ;
rdf:type faldo:ExactPosition .
?pfse32 faldo:position ?thisPositionOn35 ;
rdf:type faldo:ExactPosition .
?ligand33 rdfs:subClassOf chebi:29105 .
?pfs36 up:annotation ?annotation37 .
?annotation37 faldo:begin ?pfsb38 ;
faldo:end ?pfse39 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton acceptor' .
?pfsb38 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?pfse39 faldo:position ?thisPositionOn41 ;
rdf:type faldo:ExactPosition .
?pfs42 up:annotation ?annotation43 .
?annotation43 faldo:begin ?pfsb44 ;
faldo:end ?pfse45 ;
up:ligand ?ligand46 ;
rdf:type up:Binding_Site_Annotation .
?pfsb44 faldo:position ?thisPositionOn47 ;
rdf:type faldo:ExactPosition .
?pfse45 faldo:position ?thisPositionOn48 ;
rdf:type faldo:ExactPosition .
?ligand46 rdfs:subClassOf chebi:57540 .
?pfs49 up:annotation ?annotation50 .
?annotation50 faldo:begin ?pfsb51 ;
faldo:end ?pfse52 ;
up:ligand ?ligand53 ;
rdf:type up:Binding_Site_Annotation .
?pfsb51 faldo:position ?thisPositionOn54 ;
rdf:type faldo:ExactPosition .
?pfse52 faldo:position ?thisPositionOn55 ;
rdf:type faldo:ExactPosition .
?ligand53 rdfs:subClassOf chebi:57540 .
?pfs56 up:annotation ?annotation57 .
?annotation57 faldo:begin ?pfsb58 ;
faldo:end ?pfse59 ;
up:ligand ?ligand60 ;
rdf:type up:Binding_Site_Annotation .
?pfsb58 faldo:position ?thisPositionOn61 ;
rdf:type faldo:ExactPosition .
?pfse59 faldo:position ?thisPositionOn62 ;
rdf:type faldo:ExactPosition .
?ligand60 rdfs:subClassOf chebi:57540 .
?pfs63 up:annotation ?annotation64 .
?annotation64 faldo:begin ?pfsb65 ;
faldo:end ?pfse66 ;
up:ligand ?ligand67 ;
rdf:type up:Binding_Site_Annotation .
?pfsb65 faldo:position ?thisPositionOn68 ;
rdf:type faldo:ExactPosition .
?pfse66 faldo:position ?thisPositionOn69 ;
rdf:type faldo:ExactPosition .
?ligand67 rdfs:subClassOf chebi:17154 .
?pfs70 up:annotation ?annotation71 .
?annotation71 faldo:begin ?pfsb72 ;
faldo:end ?pfse73 ;
up:ligand ?ligand74 ;
rdf:type up:Binding_Site_Annotation .
?pfsb72 faldo:position ?thisPositionOn75 ;
rdf:type faldo:ExactPosition .
?pfse73 faldo:position ?thisPositionOn76 ;
rdf:type faldo:ExactPosition .
?ligand74 rdfs:subClassOf chebi:57540 .
?pfs77 up:annotation ?annotation78 .
?annotation78 faldo:begin ?pfsb79 ;
faldo:end ?pfse80 ;
up:ligand ?ligand81 ;
rdf:type up:Binding_Site_Annotation .
?pfsb79 faldo:position ?thisPositionOn82 ;
rdf:type faldo:ExactPosition .
?pfse80 faldo:position ?thisPositionOn83 ;
rdf:type faldo:ExactPosition .
?ligand81 rdfs:subClassOf chebi:57540 .
?pfs84 up:annotation ?annotation85 .
?annotation85 faldo:begin ?pfsb86 ;
faldo:end ?pfse87 ;
up:ligand ?ligand88 ;
rdf:type up:Binding_Site_Annotation .
?pfsb86 faldo:position ?thisPositionOn89 ;
rdf:type faldo:ExactPosition .
?pfse87 faldo:position ?thisPositionOn90 ;
rdf:type faldo:ExactPosition .
?ligand88 rdfs:subClassOf chebi:57540 .
?pfs91 up:annotation ?annotation92 .
?annotation92 faldo:begin ?pfsb93 ;
faldo:end ?pfse94 ;
up:ligand ?ligand95 ;
rdf:type up:Binding_Site_Annotation .
?pfsb93 faldo:position ?thisPositionOn96 ;
rdf:type faldo:ExactPosition .
?pfse94 faldo:position ?thisPositionOn97 ;
rdf:type faldo:ExactPosition .
?ligand95 rdfs:subClassOf chebi:17154 .
?pfs98 up:annotation ?annotation99 .
?annotation99 faldo:begin ?pfsb100 ;
faldo:end ?pfse101 ;
up:ligand ?ligand102 ;
rdf:type up:Binding_Site_Annotation .
?pfsb100 faldo:position ?thisPositionOn103 ;
rdf:type faldo:ExactPosition .
?pfse101 faldo:position ?thisPositionOn104 ;
rdf:type faldo:ExactPosition .
?ligand102 rdfs:subClassOf chebi:57540 .
?pfs105 up:annotation ?annotation106 .
?annotation106 faldo:begin ?pfsb107 ;
faldo:end ?pfse108 ;
up:ligand ?ligand109 ;
rdf:type up:Binding_Site_Annotation .
?pfsb107 faldo:position ?thisPositionOn110 ;
rdf:type faldo:ExactPosition .
?pfse108 faldo:position ?thisPositionOn111 ;
rdf:type faldo:ExactPosition .
?ligand109 rdfs:subClassOf chebi:17154 .
?pfs112 up:annotation ?annotation113 .
?annotation113 faldo:begin ?pfsb114 ;
faldo:end ?pfse115 ;
up:ligand ?ligand116 ;
rdf:type up:Binding_Site_Annotation .
?pfsb114 faldo:position ?thisPositionOn117 ;
rdf:type faldo:ExactPosition .
?pfse115 faldo:position ?thisPositionOn118 ;
rdf:type faldo:ExactPosition .
?ligand116 rdfs:subClassOf chebi:57540 .
?pfs119 up:annotation ?annotation120 .
?annotation120 faldo:begin ?pfsb121 ;
faldo:end ?pfse122 ;
up:ligand ?ligand123 ;
rdf:type up:Binding_Site_Annotation .
?pfsb121 faldo:position ?thisPositionOn124 ;
rdf:type faldo:ExactPosition .
?pfse122 faldo:position ?thisPositionOn125 ;
rdf:type faldo:ExactPosition .
?ligand123 rdfs:subClassOf chebi:57540 .
?pfs126 up:annotation ?annotation127 .
?annotation127 faldo:begin ?pfsb128 ;
faldo:end ?pfse129 ;
up:ligand ?ligand130 ;
rdf:type up:Binding_Site_Annotation .
?pfsb128 faldo:position ?thisPositionOn131 ;
rdf:type faldo:ExactPosition .
?pfse129 faldo:position ?thisPositionOn132 ;
rdf:type faldo:ExactPosition .
?ligand130 rdfs:subClassOf chebi:57540 .
?pfs133 up:annotation ?annotation134 .
?annotation134 faldo:begin ?pfsb135 ;
faldo:end ?pfse136 ;
up:ligand ?ligand137 ;
rdf:type up:Binding_Site_Annotation .
?pfsb135 faldo:position ?thisPositionOn138 ;
rdf:type faldo:ExactPosition .
?pfse136 faldo:position ?thisPositionOn139 ;
rdf:type faldo:ExactPosition .
?ligand137 rdfs:subClassOf chebi:57540 .
?pfs140 up:annotation ?annotation141 .
?annotation141 faldo:begin ?pfsb142 ;
faldo:end ?pfse143 ;
up:ligand ?ligand144 ;
rdf:type up:Binding_Site_Annotation .
?pfsb142 faldo:position ?thisPositionOn145 ;
rdf:type faldo:ExactPosition .
?pfse143 faldo:position ?thisPositionOn146 ;
rdf:type faldo:ExactPosition .
?ligand144 rdfs:subClassOf chebi:57540 .
?pfs147 up:annotation ?annotation148 .
?annotation148 faldo:begin ?pfsb149 ;
faldo:end ?pfse150 ;
up:ligand ?ligand151 ;
rdf:type up:Binding_Site_Annotation .
?pfsb149 faldo:position ?thisPositionOn152 ;
rdf:type faldo:ExactPosition .
?pfse150 faldo:position ?thisPositionOn153 ;
rdf:type faldo:ExactPosition .
?ligand151 rdfs:subClassOf chebi:57540 .
?pfs154 up:annotation ?annotation155 .
?annotation155 faldo:begin ?pfsb156 ;
faldo:end ?pfse157 ;
up:ligand ?ligand158 ;
rdf:type up:Binding_Site_Annotation .
?pfsb156 faldo:position ?thisPositionOn159 ;
rdf:type faldo:ExactPosition .
?pfse157 faldo:position ?thisPositionOn160 ;
rdf:type faldo:ExactPosition .
?ligand158 rdfs:subClassOf chebi:57540 .
?pfs161 up:annotation ?annotation162 .
?annotation162 faldo:begin ?pfsb163 ;
faldo:end ?pfse164 ;
up:ligand ?ligand165 ;
rdf:type up:Binding_Site_Annotation .
?pfsb163 faldo:position ?thisPositionOn166 ;
rdf:type faldo:ExactPosition .
?pfse164 faldo:position ?thisPositionOn167 ;
rdf:type faldo:ExactPosition .
?ligand165 rdfs:subClassOf chebi:57540 .
_:690866 a rdf:Statement ;
up:attribution _:690825 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:690867 a rdf:Statement ;
up:attribution _:690826 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:690868 a rdf:Statement ;
up:attribution _:690827 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:690869 a rdf:Statement ;
up:attribution _:690828 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:690870 a rdf:Statement ;
up:attribution _:690829 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:690871 a rdf:Statement ;
up:attribution _:690830 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:690872 a rdf:Statement ;
up:attribution _:690831 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:690873 a rdf:Statement ;
up:attribution _:690832 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:520 .
_:690874 a rdf:Statement ;
up:attribution _:690833 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:808 .
_:690875 a rdf:Statement ;
up:attribution _:690834 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:690876 a rdf:Statement ;
up:attribution _:690835 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0034979 .
_:690877 a rdf:Statement ;
up:attribution _:690836 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0070403 .
_:690878 a rdf:Statement ;
up:attribution _:690837 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006476 .
_:690879 a rdf:Statement ;
up:attribution _:690838 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:690880 a rdf:Statement ;
up:attribution _:690839 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:862 .
_:690881 a rdf:Statement ;
up:attribution _:690840 ;
rdf:subject ?case8 ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008270 .
_:690882 a rdf:Statement ;
up:attribution _:690841 ;
rdf:subject ?case9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:804 .
_:690883 a rdf:Statement ;
up:attribution _:690842 ;
rdf:subject ?case9 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:805 .
_:690884 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:690885 a rdf:Statement ;
up:attribution _:690843 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:690886 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:690887 a rdf:Statement ;
up:attribution _:690844 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation18 .
_:690888 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:690889 a rdf:Statement ;
up:attribution _:690845 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation24 .
_:690890 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation30 .
_:690891 a rdf:Statement ;
up:attribution _:690846 ;
rdf:subject ?pfs11 ;
rdf:predicate up:annotation ;
rdf:object ?annotation30 .
_:690892 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs36 ;
rdf:predicate up:annotation ;
rdf:object ?annotation37 .
_:690893 a rdf:Statement ;
up:attribution _:690847 ;
rdf:subject ?pfs36 ;
rdf:predicate up:annotation ;
rdf:object ?annotation37 .
_:690894 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs42 ;
rdf:predicate up:annotation ;
rdf:object ?annotation43 .
_:690895 a rdf:Statement ;
up:attribution _:690848 ;
rdf:subject ?pfs42 ;
rdf:predicate up:annotation ;
rdf:object ?annotation43 .
_:690896 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs49 ;
rdf:predicate up:annotation ;
rdf:object ?annotation50 .
_:690897 a rdf:Statement ;
up:attribution _:690849 ;
rdf:subject ?pfs49 ;
rdf:predicate up:annotation ;
rdf:object ?annotation50 .
_:690898 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs56 ;
rdf:predicate up:annotation ;
rdf:object ?annotation57 .
_:690899 a rdf:Statement ;
up:attribution _:690850 ;
rdf:subject ?pfs56 ;
rdf:predicate up:annotation ;
rdf:object ?annotation57 .
_:690900 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs63 ;
rdf:predicate up:annotation ;
rdf:object ?annotation64 .
_:690901 a rdf:Statement ;
up:attribution _:690851 ;
rdf:subject ?pfs63 ;
rdf:predicate up:annotation ;
rdf:object ?annotation64 .
_:690902 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:690903 a rdf:Statement ;
up:attribution _:690852 ;
rdf:subject ?pfs70 ;
rdf:predicate up:annotation ;
rdf:object ?annotation71 .
_:690904 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs77 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
_:690905 a rdf:Statement ;
up:attribution _:690853 ;
rdf:subject ?pfs77 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
_:690906 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs84 ;
rdf:predicate up:annotation ;
rdf:object ?annotation85 .
_:690907 a rdf:Statement ;
up:attribution _:690854 ;
rdf:subject ?pfs84 ;
rdf:predicate up:annotation ;
rdf:object ?annotation85 .
_:690908 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs91 ;
rdf:predicate up:annotation ;
rdf:object ?annotation92 .
_:690909 a rdf:Statement ;
up:attribution _:690855 ;
rdf:subject ?pfs91 ;
rdf:predicate up:annotation ;
rdf:object ?annotation92 .
_:690910 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs98 ;
rdf:predicate up:annotation ;
rdf:object ?annotation99 .
_:690911 a rdf:Statement ;
up:attribution _:690856 ;
rdf:subject ?pfs98 ;
rdf:predicate up:annotation ;
rdf:object ?annotation99 .
_:690912 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs105 ;
rdf:predicate up:annotation ;
rdf:object ?annotation106 .
_:690913 a rdf:Statement ;
up:attribution _:690857 ;
rdf:subject ?pfs105 ;
rdf:predicate up:annotation ;
rdf:object ?annotation106 .
_:690914 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs112 ;
rdf:predicate up:annotation ;
rdf:object ?annotation113 .
_:690915 a rdf:Statement ;
up:attribution _:690858 ;
rdf:subject ?pfs112 ;
rdf:predicate up:annotation ;
rdf:object ?annotation113 .
_:690916 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs119 ;
rdf:predicate up:annotation ;
rdf:object ?annotation120 .
_:690917 a rdf:Statement ;
up:attribution _:690859 ;
rdf:subject ?pfs119 ;
rdf:predicate up:annotation ;
rdf:object ?annotation120 .
_:690918 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs126 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:690919 a rdf:Statement ;
up:attribution _:690860 ;
rdf:subject ?pfs126 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:690920 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs133 ;
rdf:predicate up:annotation ;
rdf:object ?annotation134 .
_:690921 a rdf:Statement ;
up:attribution _:690861 ;
rdf:subject ?pfs133 ;
rdf:predicate up:annotation ;
rdf:object ?annotation134 .
_:690922 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs140 ;
rdf:predicate up:annotation ;
rdf:object ?annotation141 .
_:690923 a rdf:Statement ;
up:attribution _:690862 ;
rdf:subject ?pfs140 ;
rdf:predicate up:annotation ;
rdf:object ?annotation141 .
_:690924 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs147 ;
rdf:predicate up:annotation ;
rdf:object ?annotation148 .
_:690925 a rdf:Statement ;
up:attribution _:690863 ;
rdf:subject ?pfs147 ;
rdf:predicate up:annotation ;
rdf:object ?annotation148 .
_:690926 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs154 ;
rdf:predicate up:annotation ;
rdf:object ?annotation155 .
_:690927 a rdf:Statement ;
up:attribution _:690864 ;
rdf:subject ?pfs154 ;
rdf:predicate up:annotation ;
rdf:object ?annotation155 .
_:690928 a rdf:Statement ;
up:source unirule:MF_01968 ;
rdf:subject ?pfs161 ;
rdf:predicate up:annotation ;
rdf:object ?annotation162 .
_:690929 a rdf:Statement ;
up:attribution _:690865 ;
rdf:subject ?pfs161 ;
rdf:predicate up:annotation ;
rdf:object ?annotation162 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_01968
#Rule MF_01968 Created by:? on:2012-04-02 Modified by:Edouard de Castro on:2024-09-03
{
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01968 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
FILTER (! (EXISTS {
?this rdfs:seeAlso signature:MF_01121 .
})) .
} UNION {
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_01968 .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
FILTER (! (EXISTS {
?this rdfs:seeAlso signature:MF_01121 .
})) .
}
BIND(URI(CONCAT(STR(?this), '#MF_01968a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a7')) AS ?annotation7) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch172 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0173 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0175 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968168 .
?templateMotifSequenceMatchRegionQ9WYW0173 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0174 .
?templateMotifSequenceMatchBeginQ9WYW0174 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0169 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0175 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch176 faldo:location ?targetMotifMatchRegionMatch177 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968179 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968170 .
?targetMotifMatchRegionMatch177 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968178 .
?targetMotifMatchRegionMatchBeginMF_01968178 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968171 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968179 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(?this AS ?tagFTGRP_1) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968168, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968168) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968168, CONCAT('^(?:-*[^-]){', STR(((124 - ?templateMotifSequenceMatchBeginPositionQ9WYW0169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1180) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1180), '}'), '')))), '[^-]', ''))) AS ?step2181) .
BIND(((?step2181 + ?targetMotifMatchRegionMatchBeginPositionMF_01968171) - 1) AS ?thisPositionOn16) .
BIND(?thisPositionOn16 AS ?thisPositionOn17) .
BIND(?this AS ?pfs1t182) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn16))) AS ?pfsb13) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfse14) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn16, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968168, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968168) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968168, CONCAT('^(?:-*[^-]){', STR(((127 - ?templateMotifSequenceMatchBeginPositionQ9WYW0169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1183) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1183), '}'), '')))), '[^-]', ''))) AS ?step2184) .
BIND(((?step2184 + ?targetMotifMatchRegionMatchBeginPositionMF_01968171) - 1) AS ?thisPositionOn22) .
BIND(?thisPositionOn22 AS ?thisPositionOn23) .
BIND(?this AS ?pfs1t185) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn22))) AS ?pfsb19) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn23))) AS ?pfse20) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn22, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968168, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968168) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968168, CONCAT('^(?:-*[^-]){', STR(((148 - ?templateMotifSequenceMatchBeginPositionQ9WYW0169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1186) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1186), '}'), '')))), '[^-]', ''))) AS ?step2187) .
BIND(((?step2187 + ?targetMotifMatchRegionMatchBeginPositionMF_01968171) - 1) AS ?thisPositionOn28) .
BIND(?thisPositionOn28 AS ?thisPositionOn29) .
BIND(?this AS ?pfs1t188) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn28))) AS ?pfsb25) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn29))) AS ?pfse26) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn28, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968168, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968168) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968168, CONCAT('^(?:-*[^-]){', STR(((151 - ?templateMotifSequenceMatchBeginPositionQ9WYW0169) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1189) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968170, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968170) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968170, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1189), '}'), '')))), '[^-]', ''))) AS ?step2190) .
BIND(((?step2190 + ?targetMotifMatchRegionMatchBeginPositionMF_01968171) - 1) AS ?thisPositionOn34) .
BIND(?thisPositionOn34 AS ?thisPositionOn35) .
BIND(?this AS ?pfs1t191) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn34))) AS ?pfsb31) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn35))) AS ?pfse32) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn34, 1) = 'C')) .
BIND(?this AS ?pfs11) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch196 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0197 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0199 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968192 .
?templateMotifSequenceMatchRegionQ9WYW0197 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0198 .
?templateMotifSequenceMatchBeginQ9WYW0198 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0193 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0199 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch200 faldo:location ?targetMotifMatchRegionMatch201 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968203 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968194 .
?targetMotifMatchRegionMatch201 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968202 .
?targetMotifMatchRegionMatchBeginMF_01968202 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968195 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968203 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968192, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968192) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968192, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionQ9WYW0193) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1204) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968194, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968194) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968194, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968194) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968194, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1204), '}'), '')))), '[^-]', ''))) AS ?step2205) .
BIND(((?step2205 + ?targetMotifMatchRegionMatchBeginPositionMF_01968195) - 1) AS ?thisPositionOn40) .
BIND(?thisPositionOn40 AS ?thisPositionOn41) .
BIND(?this AS ?pfs2t206) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfsb38) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn41))) AS ?pfse39) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn40, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a37')) AS ?annotation37) .
BIND(?this AS ?pfs36) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch211 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0212 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0214 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968207 .
?templateMotifSequenceMatchRegionQ9WYW0212 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0213 .
?templateMotifSequenceMatchBeginQ9WYW0213 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0208 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0214 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch215 faldo:location ?targetMotifMatchRegionMatch216 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968218 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968209 .
?targetMotifMatchRegionMatch216 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968217 .
?targetMotifMatchRegionMatchBeginMF_01968217 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968210 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968218 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968207, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968207) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968207, CONCAT('^(?:-*[^-]){', STR(((22 - ?templateMotifSequenceMatchBeginPositionQ9WYW0208) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1219) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968209, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968209) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968209, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968209, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968209) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968209, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1219), '}'), '')))), '[^-]', ''))) AS ?step2220) .
BIND(((?step2220 + ?targetMotifMatchRegionMatchBeginPositionMF_01968210) - 1) AS ?thisPositionOn47) .
BIND(?thisPositionOn47 AS ?thisPositionOn48) .
BIND(?this AS ?pfs2t221) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn47))) AS ?pfsb44) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn48))) AS ?pfse45) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn47, 1) = 'A')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a43')) AS ?annotation43) .
BIND(?this AS ?pfs42) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch226 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0227 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0229 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968222 .
?templateMotifSequenceMatchRegionQ9WYW0227 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0228 .
?templateMotifSequenceMatchBeginQ9WYW0228 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0223 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0229 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch230 faldo:location ?targetMotifMatchRegionMatch231 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968233 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968224 .
?targetMotifMatchRegionMatch231 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968232 .
?targetMotifMatchRegionMatchBeginMF_01968232 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968225 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968233 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968222, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968222) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968222, CONCAT('^(?:-*[^-]){', STR(((26 - ?templateMotifSequenceMatchBeginPositionQ9WYW0223) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1234) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968224, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968224) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968224, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968224) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968224, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1234), '}'), '')))), '[^-]', ''))) AS ?step2235) .
BIND(((?step2235 + ?targetMotifMatchRegionMatchBeginPositionMF_01968225) - 1) AS ?thisPositionOn54) .
BIND(?thisPositionOn54 AS ?thisPositionOn55) .
BIND(?this AS ?pfs2t236) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn54))) AS ?pfsb51) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn55))) AS ?pfse52) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn54, 1) = 'T')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a50')) AS ?annotation50) .
BIND(?this AS ?pfs49) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch241 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0242 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0244 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968237 .
?templateMotifSequenceMatchRegionQ9WYW0242 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0243 .
?templateMotifSequenceMatchBeginQ9WYW0243 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0238 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0244 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch245 faldo:location ?targetMotifMatchRegionMatch246 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968248 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968239 .
?targetMotifMatchRegionMatch246 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968247 .
?targetMotifMatchRegionMatchBeginMF_01968247 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968240 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968248 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968237, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968237) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968237, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionQ9WYW0238) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1249) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968239, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968239) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968239, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1249), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968239, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968239) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968239, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1249), '}'), '')))), '[^-]', ''))) AS ?step2250) .
BIND(((?step2250 + ?targetMotifMatchRegionMatchBeginPositionMF_01968240) - 1) AS ?thisPositionOn61) .
BIND(?thisPositionOn61 AS ?thisPositionOn62) .
BIND(?this AS ?pfs2t251) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn61))) AS ?pfsb58) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn62))) AS ?pfse59) .
FILTER (REGEX('[FY]', SUBSTR(?thisSequenceValue, ?thisPositionOn61, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a57')) AS ?annotation57) .
BIND(?this AS ?pfs56) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch256 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0257 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0259 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968252 .
?templateMotifSequenceMatchRegionQ9WYW0257 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0258 .
?templateMotifSequenceMatchBeginQ9WYW0258 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0253 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0259 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch260 faldo:location ?targetMotifMatchRegionMatch261 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968263 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968254 .
?targetMotifMatchRegionMatch261 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968262 .
?targetMotifMatchRegionMatchBeginMF_01968262 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968255 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968263 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968252, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968252) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968252, CONCAT('^(?:-*[^-]){', STR(((33 - ?templateMotifSequenceMatchBeginPositionQ9WYW0253) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1264) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968254, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968254) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968254, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968254) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968254, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1264), '}'), '')))), '[^-]', ''))) AS ?step2265) .
BIND(((?step2265 + ?targetMotifMatchRegionMatchBeginPositionMF_01968255) - 1) AS ?thisPositionOn68) .
BIND(?thisPositionOn68 AS ?thisPositionOn69) .
BIND(?this AS ?pfs2t266) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn68))) AS ?pfsb65) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn69))) AS ?pfse66) .
FILTER (REGEX('[FY]', SUBSTR(?thisSequenceValue, ?thisPositionOn68, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a64')) AS ?annotation64) .
BIND(?this AS ?pfs63) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch271 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0272 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0274 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968267 .
?templateMotifSequenceMatchRegionQ9WYW0272 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0273 .
?templateMotifSequenceMatchBeginQ9WYW0273 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0268 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0274 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch275 faldo:location ?targetMotifMatchRegionMatch276 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968278 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968269 .
?targetMotifMatchRegionMatch276 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968277 .
?targetMotifMatchRegionMatchBeginMF_01968277 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968270 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968278 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968267, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968267) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968267, CONCAT('^(?:-*[^-]){', STR(((34 - ?templateMotifSequenceMatchBeginPositionQ9WYW0268) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1279) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968269, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968269) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1279), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968269, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968269) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968269, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1279), '}'), '')))), '[^-]', ''))) AS ?step2280) .
BIND(((?step2280 + ?targetMotifMatchRegionMatchBeginPositionMF_01968270) - 1) AS ?thisPositionOn75) .
BIND(?thisPositionOn75 AS ?thisPositionOn76) .
BIND(?this AS ?pfs2t281) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn75))) AS ?pfsb72) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfse73) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn75, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a71')) AS ?annotation71) .
BIND(?this AS ?pfs70) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch286 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0287 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0289 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968282 .
?templateMotifSequenceMatchRegionQ9WYW0287 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0288 .
?templateMotifSequenceMatchBeginQ9WYW0288 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0283 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0289 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch290 faldo:location ?targetMotifMatchRegionMatch291 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968293 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968284 .
?targetMotifMatchRegionMatch291 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968292 .
?targetMotifMatchRegionMatchBeginMF_01968292 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968285 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968293 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968282, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968282) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968282, CONCAT('^(?:-*[^-]){', STR(((98 - ?templateMotifSequenceMatchBeginPositionQ9WYW0283) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1294) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968284, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968284) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968284, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1294), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968284, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968284) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968284, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1294), '}'), '')))), '[^-]', ''))) AS ?step2295) .
BIND(((?step2295 + ?targetMotifMatchRegionMatchBeginPositionMF_01968285) - 1) AS ?thisPositionOn82) .
BIND(?thisPositionOn82 AS ?thisPositionOn83) .
BIND(?this AS ?pfs2t296) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'Q')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a78')) AS ?annotation78) .
BIND(?this AS ?pfs77) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch301 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0302 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0304 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968297 .
?templateMotifSequenceMatchRegionQ9WYW0302 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0303 .
?templateMotifSequenceMatchBeginQ9WYW0303 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0298 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0304 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch305 faldo:location ?targetMotifMatchRegionMatch306 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968308 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968299 .
?targetMotifMatchRegionMatch306 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968307 .
?targetMotifMatchRegionMatchBeginMF_01968307 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968300 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968308 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968297, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968297) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968297, CONCAT('^(?:-*[^-]){', STR(((100 - ?templateMotifSequenceMatchBeginPositionQ9WYW0298) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1309) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968299, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968299) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968299, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968299, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968299) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968299, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1309), '}'), '')))), '[^-]', ''))) AS ?step2310) .
BIND(((?step2310 + ?targetMotifMatchRegionMatchBeginPositionMF_01968300) - 1) AS ?thisPositionOn89) .
BIND(?thisPositionOn89 AS ?thisPositionOn90) .
BIND(?this AS ?pfs2t311) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfsb86) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn90))) AS ?pfse87) .
FILTER (REGEX('[IVT]', SUBSTR(?thisSequenceValue, ?thisPositionOn89, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a85')) AS ?annotation85) .
BIND(?this AS ?pfs84) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch316 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0317 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0319 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968312 .
?templateMotifSequenceMatchRegionQ9WYW0317 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0318 .
?templateMotifSequenceMatchBeginQ9WYW0318 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0313 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0319 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch320 faldo:location ?targetMotifMatchRegionMatch321 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968323 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968314 .
?targetMotifMatchRegionMatch321 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968322 .
?targetMotifMatchRegionMatchBeginMF_01968322 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968315 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968323 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968312, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968312) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968312, CONCAT('^(?:-*[^-]){', STR(((100 - ?templateMotifSequenceMatchBeginPositionQ9WYW0313) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1324) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968314, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968314) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968314, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1324), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968314, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968314) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968314, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1324), '}'), '')))), '[^-]', ''))) AS ?step2325) .
BIND(((?step2325 + ?targetMotifMatchRegionMatchBeginPositionMF_01968315) - 1) AS ?thisPositionOn96) .
BIND(?thisPositionOn96 AS ?thisPositionOn97) .
BIND(?this AS ?pfs2t326) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn96))) AS ?pfsb93) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn97))) AS ?pfse94) .
FILTER (REGEX('[IVT]', SUBSTR(?thisSequenceValue, ?thisPositionOn96, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a92')) AS ?annotation92) .
BIND(?this AS ?pfs91) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch331 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0332 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0334 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968327 .
?templateMotifSequenceMatchRegionQ9WYW0332 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0333 .
?templateMotifSequenceMatchBeginQ9WYW0333 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0328 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0334 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch335 faldo:location ?targetMotifMatchRegionMatch336 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968338 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968329 .
?targetMotifMatchRegionMatch336 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968337 .
?targetMotifMatchRegionMatchBeginMF_01968337 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968330 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968338 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968327, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968327) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968327, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionQ9WYW0328) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1339) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968329, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968329) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968329, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968329, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968329) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968329, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1339), '}'), '')))), '[^-]', ''))) AS ?step2340) .
BIND(((?step2340 + ?targetMotifMatchRegionMatchBeginPositionMF_01968330) - 1) AS ?thisPositionOn103) .
BIND(?thisPositionOn103 AS ?thisPositionOn104) .
BIND(?this AS ?pfs2t341) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn103))) AS ?pfsb100) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn104))) AS ?pfse101) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn103, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a99')) AS ?annotation99) .
BIND(?this AS ?pfs98) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch346 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0347 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0349 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968342 .
?templateMotifSequenceMatchRegionQ9WYW0347 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0348 .
?templateMotifSequenceMatchBeginQ9WYW0348 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0343 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0349 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch350 faldo:location ?targetMotifMatchRegionMatch351 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968353 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968344 .
?targetMotifMatchRegionMatch351 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968352 .
?targetMotifMatchRegionMatchBeginMF_01968352 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968345 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968353 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968342, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968342) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968342, CONCAT('^(?:-*[^-]){', STR(((101 - ?templateMotifSequenceMatchBeginPositionQ9WYW0343) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1354) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968344, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968344) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968344, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968344) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968344, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1354), '}'), '')))), '[^-]', ''))) AS ?step2355) .
BIND(((?step2355 + ?targetMotifMatchRegionMatchBeginPositionMF_01968345) - 1) AS ?thisPositionOn110) .
BIND(?thisPositionOn110 AS ?thisPositionOn111) .
BIND(?this AS ?pfs2t356) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn110))) AS ?pfsb107) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn111))) AS ?pfse108) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn110, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a106')) AS ?annotation106) .
BIND(?this AS ?pfs105) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch361 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0362 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0364 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968357 .
?templateMotifSequenceMatchRegionQ9WYW0362 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0363 .
?templateMotifSequenceMatchBeginQ9WYW0363 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0358 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0364 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch365 faldo:location ?targetMotifMatchRegionMatch366 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968368 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968359 .
?targetMotifMatchRegionMatch366 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968367 .
?targetMotifMatchRegionMatchBeginMF_01968367 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968360 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968368 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968357, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968357) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968357, CONCAT('^(?:-*[^-]){', STR(((116 - ?templateMotifSequenceMatchBeginPositionQ9WYW0358) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1369) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968359, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968359) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968359, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968359) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968359, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1369), '}'), '')))), '[^-]', ''))) AS ?step2370) .
BIND(((?step2370 + ?targetMotifMatchRegionMatchBeginPositionMF_01968360) - 1) AS ?thisPositionOn117) .
BIND(?thisPositionOn117 AS ?thisPositionOn118) .
BIND(?this AS ?pfs2t371) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn117))) AS ?pfsb114) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn118))) AS ?pfse115) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn117, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a113')) AS ?annotation113) .
BIND(?this AS ?pfs112) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch376 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0377 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0379 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968372 .
?templateMotifSequenceMatchRegionQ9WYW0377 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0378 .
?templateMotifSequenceMatchBeginQ9WYW0378 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0373 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0379 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch380 faldo:location ?targetMotifMatchRegionMatch381 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968383 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968374 .
?targetMotifMatchRegionMatch381 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968382 .
?targetMotifMatchRegionMatchBeginMF_01968382 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968375 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968383 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968372, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968372) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968372, CONCAT('^(?:-*[^-]){', STR(((189 - ?templateMotifSequenceMatchBeginPositionQ9WYW0373) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1384) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968374, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968374) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968374, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968374) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968374, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1384), '}'), '')))), '[^-]', ''))) AS ?step2385) .
BIND(((?step2385 + ?targetMotifMatchRegionMatchBeginPositionMF_01968375) - 1) AS ?thisPositionOn124) .
BIND(?thisPositionOn124 AS ?thisPositionOn125) .
BIND(?this AS ?pfs2t386) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn124))) AS ?pfsb121) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfse122) .
FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn124, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a120')) AS ?annotation120) .
BIND(?this AS ?pfs119) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch391 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0392 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0394 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968387 .
?templateMotifSequenceMatchRegionQ9WYW0392 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0393 .
?templateMotifSequenceMatchBeginQ9WYW0393 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0388 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0394 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch395 faldo:location ?targetMotifMatchRegionMatch396 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968398 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968389 .
?targetMotifMatchRegionMatch396 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968397 .
?targetMotifMatchRegionMatchBeginMF_01968397 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968390 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968398 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968387, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968387) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968387, CONCAT('^(?:-*[^-]){', STR(((190 - ?templateMotifSequenceMatchBeginPositionQ9WYW0388) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1399) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968389, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968389) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968389, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1399), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968389, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968389) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968389, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1399), '}'), '')))), '[^-]', ''))) AS ?step2400) .
BIND(((?step2400 + ?targetMotifMatchRegionMatchBeginPositionMF_01968390) - 1) AS ?thisPositionOn131) .
BIND(?thisPositionOn131 AS ?thisPositionOn132) .
BIND(?this AS ?pfs2t401) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb128) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse129) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a127')) AS ?annotation127) .
BIND(?this AS ?pfs126) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch406 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0407 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0409 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968402 .
?templateMotifSequenceMatchRegionQ9WYW0407 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0408 .
?templateMotifSequenceMatchBeginQ9WYW0408 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0403 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0409 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch410 faldo:location ?targetMotifMatchRegionMatch411 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968413 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968404 .
?targetMotifMatchRegionMatch411 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968412 .
?targetMotifMatchRegionMatchBeginMF_01968412 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968405 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968413 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968402, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968402) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968402, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionQ9WYW0403) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1414) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968404, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968404) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968404, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1414), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968404, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968404) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968404, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1414), '}'), '')))), '[^-]', ''))) AS ?step2415) .
BIND(((?step2415 + ?targetMotifMatchRegionMatchBeginPositionMF_01968405) - 1) AS ?thisPositionOn138) .
BIND(?thisPositionOn138 AS ?thisPositionOn139) .
BIND(?this AS ?pfs2t416) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfsb135) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn139))) AS ?pfse136) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn138, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a134')) AS ?annotation134) .
BIND(?this AS ?pfs133) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch421 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0422 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0424 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968417 .
?templateMotifSequenceMatchRegionQ9WYW0422 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0423 .
?templateMotifSequenceMatchBeginQ9WYW0423 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0418 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0424 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch425 faldo:location ?targetMotifMatchRegionMatch426 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968428 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968419 .
?targetMotifMatchRegionMatch426 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968427 .
?targetMotifMatchRegionMatchBeginMF_01968427 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968420 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968428 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968417, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968417) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968417, CONCAT('^(?:-*[^-]){', STR(((215 - ?templateMotifSequenceMatchBeginPositionQ9WYW0418) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1429) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968419, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968419) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968419, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968419, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968419) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968419, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1429), '}'), '')))), '[^-]', ''))) AS ?step2430) .
BIND(((?step2430 + ?targetMotifMatchRegionMatchBeginPositionMF_01968420) - 1) AS ?thisPositionOn145) .
BIND(?thisPositionOn145 AS ?thisPositionOn146) .
BIND(?this AS ?pfs2t431) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn145))) AS ?pfsb142) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn146))) AS ?pfse143) .
FILTER (REGEX('[LAV]', SUBSTR(?thisSequenceValue, ?thisPositionOn145, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a141')) AS ?annotation141) .
BIND(?this AS ?pfs140) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch436 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0437 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0439 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968432 .
?templateMotifSequenceMatchRegionQ9WYW0437 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0438 .
?templateMotifSequenceMatchBeginQ9WYW0438 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0433 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0439 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch440 faldo:location ?targetMotifMatchRegionMatch441 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968443 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968434 .
?targetMotifMatchRegionMatch441 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968442 .
?targetMotifMatchRegionMatchBeginMF_01968442 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968435 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968443 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968432, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968432) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968432, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionQ9WYW0433) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1444) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968434, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968434) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968434, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968434) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968434, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1444), '}'), '')))), '[^-]', ''))) AS ?step2445) .
BIND(((?step2445 + ?targetMotifMatchRegionMatchBeginPositionMF_01968435) - 1) AS ?thisPositionOn152) .
BIND(?thisPositionOn152 AS ?thisPositionOn153) .
BIND(?this AS ?pfs2t446) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn152))) AS ?pfsb149) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn153))) AS ?pfse150) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn152, 1) = 'G')) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a148')) AS ?annotation148) .
BIND(?this AS ?pfs147) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch451 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0452 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0454 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968447 .
?templateMotifSequenceMatchRegionQ9WYW0452 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0453 .
?templateMotifSequenceMatchBeginQ9WYW0453 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0448 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0454 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch455 faldo:location ?targetMotifMatchRegionMatch456 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968458 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968449 .
?targetMotifMatchRegionMatch456 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968457 .
?targetMotifMatchRegionMatchBeginMF_01968457 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968450 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968458 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968447, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968447) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968447, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionQ9WYW0448) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1459) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968449, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968449) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968449, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968449) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968449, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1459), '}'), '')))), '[^-]', ''))) AS ?step2460) .
BIND(((?step2460 + ?targetMotifMatchRegionMatchBeginPositionMF_01968450) - 1) AS ?thisPositionOn159) .
BIND(?thisPositionOn159 AS ?thisPositionOn160) .
BIND(?this AS ?pfs2t461) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfsb156) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn160))) AS ?pfse157) .
FILTER (REGEX('[DE]', SUBSTR(?thisSequenceValue, ?thisPositionOn159, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a155')) AS ?annotation155) .
BIND(?this AS ?pfs154) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch466 faldo:location ?templateMotifSequenceMatchRegionQ9WYW0467 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ9WYW0469 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ9WYW0MF_01968462 .
?templateMotifSequenceMatchRegionQ9WYW0467 faldo:begin ?templateMotifSequenceMatchBeginQ9WYW0468 .
?templateMotifSequenceMatchBeginQ9WYW0468 faldo:position ?templateMotifSequenceMatchBeginPositionQ9WYW0463 ;
faldo:reference isoform:Q9WYW0-1 .
?templateMotifSequenceProfileAlignmentOperationQ9WYW0469 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
?targetMotifMatch470 faldo:location ?targetMotifMatchRegionMatch471 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_01968473 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ9WYW0MF_01968464 .
?targetMotifMatchRegionMatch471 faldo:begin ?targetMotifMatchRegionMatchBeginMF_01968472 .
?targetMotifMatchRegionMatchBeginMF_01968472 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_01968465 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_01968473 edam:has_input signature:MF_01968 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ9WYW0MF_01968462, 1, (STRLEN(?templateMotifCigarQ9WYW0MF_01968462) - STRLEN(REPLACE(?templateMotifCigarQ9WYW0MF_01968462, CONCAT('^(?:-*[^-]){', STR(((232 - ?templateMotifSequenceMatchBeginPositionQ9WYW0463) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1474) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968464, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968464) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ9WYW0MF_01968464, 1, (STRLEN(?targetMotifMatchCigarQ9WYW0MF_01968464) - STRLEN(REPLACE(?targetMotifMatchCigarQ9WYW0MF_01968464, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1474), '}'), '')))), '[^-]', ''))) AS ?step2475) .
BIND(((?step2475 + ?targetMotifMatchRegionMatchBeginPositionMF_01968465) - 1) AS ?thisPositionOn166) .
BIND(?thisPositionOn166 AS ?thisPositionOn167) .
BIND(?this AS ?pfs2t476) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn166))) AS ?pfsb163) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn167))) AS ?pfse164) .
FILTER (REGEX('[VGIA]', SUBSTR(?thisSequenceValue, ?thisPositionOn166, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_01968a162')) AS ?annotation162) .
BIND(?this AS ?pfs161) .
}
OPTIONAL {
?this a up:Protein .
BIND(?this AS ?caseWithTag477) .
}
BIND(IF(BOUND(?tagFTGRP_1), ?caseWithTag477, ?UNBOUND_VARIABLE) AS ?case8) .
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
?thisOrganism rdfs:subClassOf+ taxon:2157 .
BIND(?this AS ?case9) .
}
OPTIONAL {
?this a up:Protein .
?this up:organism ?thisOrganism .
FILTER (! (EXISTS {
?thisOrganism rdfs:subClassOf+ taxon:2157 .
})) .
BIND(?this AS ?case10) .
}
}
"xsd:string |
