| http://purl.uniprot.org/unirules/MF_00716#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:264539 up:source unirule:MF_00716 .
_:264540 up:source unirule:MF_00716 .
_:264541 up:source unirule:MF_00716 .
_:264542 up:source unirule:MF_00716 .
_:264543 up:source unirule:MF_00716 .
_:264544 up:source unirule:MF_00716 .
_:264545 up:source unirule:MF_00716 .
_:264546 up:source unirule:MF_00716 .
_:264547 up:source unirule:MF_00716 .
_:264548 up:source unirule:MF_00716 .
_:264549 up:source unirule:MF_00716 .
_:264550 up:source unirule:MF_00716 .
_:264551 up:source unirule:MF_00716 .
_:264552 up:source unirule:MF_00716 .
_:264553 up:source unirule:MF_00716 .
_:264554 up:source unirule:MF_00716 .
_:264555 up:source unirule:MF_00716 .
_:264556 up:source unirule:MF_00716 .
_:264557 up:source unirule:MF_00716 .
_:264558 up:source unirule:MF_00716 .
_:264559 up:source unirule:MF_00716 .
_:264560 up:source unirule:MF_00716 .
_:264561 up:source unirule:MF_00716 .
_:264562 up:source unirule:MF_00716 .
_:264563 up:source unirule:MF_00716 .
_:264564 up:source unirule:MF_00716 .
_:264565 up:source unirule:MF_00716 .
_:264566 up:source unirule:MF_00716 .
_:264567 up:source unirule:MF_00716 .
_:264568 up:source unirule:MF_00716 .
_:264569 up:source unirule:MF_00716 .
_:264570 up:source unirule:MF_00716 .
_:264571 up:source unirule:MF_00716 .
_:264572 up:source unirule:MF_00716 .
_:264573 up:source unirule:MF_00716 .
_:264574 up:source unirule:MF_00716 .
_:264575 up:source unirule:MF_00716 .
_:264576 up:source unirule:MF_00716 .
_:264577 up:source unirule:MF_00716 .
_:264578 up:source unirule:MF_00716 .
_:264579 up:source unirule:MF_00716 .
_:264580 up:source unirule:MF_00716 .
_:264581 up:source unirule:MF_00716 .
_:264582 up:source unirule:MF_00716 .
_:264583 up:source unirule:MF_00716 .
?this up:alternativeName ?name1 ,
?name2 ;
up:annotation ?annotation4 ,
?annotation5 ,
?annotation7 ,
?annotation8 ,
?annotation9 ,
?annotation10 ,
?annotation11 ,
?annotation13 ;
up:classifiedWith GO:0005507 ,
GO:0005509 ,
GO:0042597 ,
GO:0050304 ,
keyword:106 ,
keyword:186 ,
keyword:479 ,
keyword:560 ,
keyword:574 ,
keyword:732 ;
up:precursor "true"^^xsd:boolean ;
up:recommendedName ?name0 .
?name0 up:ecName '1.7.2.4' ;
up:fullName 'Nitrous-oxide reductase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'N(2)OR' ;
rdf:type up:Structured_Name .
?name2 up:fullName 'N2O reductase' ;
rdf:type up:Structured_Name .
?gene3 skos:prefLabel 'nosZ' .
?annotation4 a up:Function_Annotation ;
rdfs:comment 'Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide.' .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity ;
up:enzymeClass .
?annotation7 up:cofactor chebi:47357 ;
rdf:type up:Cofactor_Annotation .
?annotation8 up:cofactor chebi:33730 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Each subunit contains 2 copper centers; Cu(A) (binuclear) and Cu(Z) (tetranuclear, a [4Cu-S] cluster). Cu(Z) is thought to be the site of nitrous oxide reduction.' .
?annotation9 up:cofactor chebi:29108 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 2 calcium ions per subunit. The calcium ions appear to have a role in dimer formation.' .
?annotation10 a up:Subunit_Annotation ;
rdfs:comment 'Homodimer.' .
?annotation11 a up:Subcellular_Location_Annotation .
?annotation11li12 up:cellularComponent .
?annotation13 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the NosZ family.' .
?pfs15 up:annotation ?annotation16 .
?annotation16 faldo:begin ?pfsb17 ;
faldo:end ?pfse18 ;
rdf:type up:Region_Annotation ;
rdfs:comment 'COX2-like' .
?pfsb17 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?pfse18 faldo:position ?thisPositionOn20 ;
rdf:type faldo:ExactPosition .
?pfs21 up:annotation ?annotation22 ,
?annotation28 .
?annotation22 faldo:begin ?pfsb23 ;
faldo:end ?pfse24 ;
up:ligand ?ligand25 ;
rdf:type up:Binding_Site_Annotation .
?pfsb23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?pfse24 faldo:position ?thisPositionOn27 ;
rdf:type faldo:ExactPosition .
?ligand25 rdfs:subClassOf chebi:29108 .
?annotation28 faldo:begin ?pfsb29 ;
faldo:end ?pfse30 ;
up:ligand ?ligand31 ;
rdf:type up:Binding_Site_Annotation .
?pfsb29 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfse30 faldo:position ?thisPositionOn33 ;
rdf:type faldo:ExactPosition .
?ligand31 rdfs:subClassOf chebi:29108 .
?pfs34 up:annotation ?annotation35 ,
?annotation41 ,
?annotation47 ,
?annotation53 ,
?annotation59 .
?annotation35 faldo:begin ?pfsb36 ;
faldo:end ?pfse37 ;
up:ligand ?ligand38 ;
rdf:type up:Binding_Site_Annotation .
?pfsb36 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?pfse37 faldo:position ?thisPositionOn40 ;
rdf:type faldo:ExactPosition .
?ligand38 rdfs:subClassOf chebi:29108 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
up:ligand ?ligand44 ;
rdf:type up:Binding_Site_Annotation .
?pfsb42 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?ligand44 rdfs:subClassOf chebi:29108 .
?annotation47 faldo:begin ?pfsb48 ;
faldo:end ?pfse49 ;
up:ligand ?ligand50 ;
rdf:type up:Binding_Site_Annotation .
?pfsb48 faldo:position ?thisPositionOn51 ;
rdf:type faldo:ExactPosition .
?pfse49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?ligand50 rdfs:subClassOf chebi:29108 .
?annotation53 faldo:begin ?pfsb54 ;
faldo:end ?pfse55 ;
up:ligand ?ligand56 ;
rdf:type up:Binding_Site_Annotation .
?pfsb54 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?pfse55 faldo:position ?thisPositionOn58 ;
rdf:type faldo:ExactPosition .
?ligand56 rdfs:subClassOf chebi:29108 .
?annotation59 faldo:begin ?pfsb60 ;
faldo:end ?pfse61 ;
up:ligand ?ligand62 ;
rdf:type up:Binding_Site_Annotation .
?pfsb60 faldo:position ?thisPositionOn63 ;
rdf:type faldo:ExactPosition .
?pfse61 faldo:position ?thisPositionOn64 ;
rdf:type faldo:ExactPosition .
?ligand62 rdfs:subClassOf chebi:29108 .
?pfs65 up:annotation ?annotation66 ,
?annotation72 ,
?annotation78 ,
?annotation84 ,
?annotation90 ,
?annotation96 ,
?annotation102 .
?annotation66 faldo:begin ?pfsb67 ;
faldo:end ?pfse68 ;
up:ligand ?ligand69 ;
rdf:type up:Binding_Site_Annotation .
?pfsb67 faldo:position ?thisPositionOn70 ;
rdf:type faldo:ExactPosition .
?pfse68 faldo:position ?thisPositionOn71 ;
rdf:type faldo:ExactPosition .
?ligand69 rdfs:subClassOf chebi:33730 .
?annotation72 faldo:begin ?pfsb73 ;
faldo:end ?pfse74 ;
up:ligand ?ligand75 ;
rdf:type up:Binding_Site_Annotation .
?pfsb73 faldo:position ?thisPositionOn76 ;
rdf:type faldo:ExactPosition .
?pfse74 faldo:position ?thisPositionOn77 ;
rdf:type faldo:ExactPosition .
?ligand75 rdfs:subClassOf chebi:33730 .
?annotation78 faldo:begin ?pfsb79 ;
faldo:end ?pfse80 ;
up:ligand ?ligand81 ;
rdf:type up:Binding_Site_Annotation .
?pfsb79 faldo:position ?thisPositionOn82 ;
rdf:type faldo:ExactPosition .
?pfse80 faldo:position ?thisPositionOn83 ;
rdf:type faldo:ExactPosition .
?ligand81 rdfs:subClassOf chebi:33730 .
?annotation84 faldo:begin ?pfsb85 ;
faldo:end ?pfse86 ;
up:ligand ?ligand87 ;
rdf:type up:Binding_Site_Annotation .
?pfsb85 faldo:position ?thisPositionOn88 ;
rdf:type faldo:ExactPosition .
?pfse86 faldo:position ?thisPositionOn89 ;
rdf:type faldo:ExactPosition .
?ligand87 rdfs:subClassOf chebi:33730 .
?annotation90 faldo:begin ?pfsb91 ;
faldo:end ?pfse92 ;
up:ligand ?ligand93 ;
rdf:type up:Binding_Site_Annotation .
?pfsb91 faldo:position ?thisPositionOn94 ;
rdf:type faldo:ExactPosition .
?pfse92 faldo:position ?thisPositionOn95 ;
rdf:type faldo:ExactPosition .
?ligand93 rdfs:subClassOf chebi:33730 .
?annotation96 faldo:begin ?pfsb97 ;
faldo:end ?pfse98 ;
up:ligand ?ligand99 ;
rdf:type up:Binding_Site_Annotation .
?pfsb97 faldo:position ?thisPositionOn100 ;
rdf:type faldo:ExactPosition .
?pfse98 faldo:position ?thisPositionOn101 ;
rdf:type faldo:ExactPosition .
?ligand99 rdfs:subClassOf chebi:33730 .
?annotation102 faldo:begin ?pfsb103 ;
faldo:end ?pfse104 ;
up:ligand ?ligand105 ;
rdf:type up:Binding_Site_Annotation .
?pfsb103 faldo:position ?thisPositionOn106 ;
rdf:type faldo:ExactPosition .
?pfse104 faldo:position ?thisPositionOn107 ;
rdf:type faldo:ExactPosition .
?ligand105 rdfs:subClassOf chebi:33730 .
?pfs108 up:annotation ?annotation109 ,
?annotation115 ,
?annotation121 ,
?annotation127 ,
?annotation133 ,
?annotation139 .
?annotation109 faldo:begin ?pfsb110 ;
faldo:end ?pfse111 ;
up:ligand ?ligand112 ;
rdf:type up:Binding_Site_Annotation .
?pfsb110 faldo:position ?thisPositionOn113 ;
rdf:type faldo:ExactPosition .
?pfse111 faldo:position ?thisPositionOn114 ;
rdf:type faldo:ExactPosition .
?ligand112 rdfs:subClassOf chebi:47357 .
?annotation115 faldo:begin ?pfsb116 ;
faldo:end ?pfse117 ;
up:ligand ?ligand118 ;
rdf:type up:Binding_Site_Annotation .
?pfsb116 faldo:position ?thisPositionOn119 ;
rdf:type faldo:ExactPosition .
?pfse117 faldo:position ?thisPositionOn120 ;
rdf:type faldo:ExactPosition .
?ligand118 rdfs:subClassOf chebi:47357 .
?annotation121 faldo:begin ?pfsb122 ;
faldo:end ?pfse123 ;
up:ligand ?ligand124 ;
rdf:type up:Binding_Site_Annotation .
?pfsb122 faldo:position ?thisPositionOn125 ;
rdf:type faldo:ExactPosition .
?pfse123 faldo:position ?thisPositionOn126 ;
rdf:type faldo:ExactPosition .
?ligand124 rdfs:subClassOf chebi:47357 .
?annotation127 faldo:begin ?pfsb128 ;
faldo:end ?pfse129 ;
up:ligand ?ligand130 ;
rdf:type up:Binding_Site_Annotation .
?pfsb128 faldo:position ?thisPositionOn131 ;
rdf:type faldo:ExactPosition .
?pfse129 faldo:position ?thisPositionOn132 ;
rdf:type faldo:ExactPosition .
?ligand130 rdfs:subClassOf chebi:47357 .
?annotation133 faldo:begin ?pfsb134 ;
faldo:end ?pfse135 ;
up:ligand ?ligand136 ;
rdf:type up:Binding_Site_Annotation .
?pfsb134 faldo:position ?thisPositionOn137 ;
rdf:type faldo:ExactPosition .
?pfse135 faldo:position ?thisPositionOn138 ;
rdf:type faldo:ExactPosition .
?ligand136 rdfs:subClassOf chebi:47357 .
?annotation139 faldo:begin ?pfsb140 ;
faldo:end ?pfse141 ;
up:ligand ?ligand142 ;
rdf:type up:Binding_Site_Annotation .
?pfsb140 faldo:position ?thisPositionOn143 ;
rdf:type faldo:ExactPosition .
?pfse141 faldo:position ?thisPositionOn144 ;
rdf:type faldo:ExactPosition .
?ligand142 rdfs:subClassOf chebi:47357 .
?sam145 up:classifiedWith keyword:732 .
?signal146 faldo:begin ?signalb147 ;
faldo:end ?signale148 .
?signalb147 faldo:position ?signalbp149 .
?signale148 faldo:position ?signalep150 .
?keyword151 up:range ?signal146 .
_:264584 a rdf:Statement ;
up:attribution _:264539 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:264585 a rdf:Statement ;
up:attribution _:264540 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:264586 a rdf:Statement ;
up:attribution _:264541 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name2 .
_:264587 a rdf:Statement ;
up:attribution _:264542 ;
rdf:subject ?this ;
rdf:predicate up:precursor ;
rdf:object "true"^^xsd:boolean .
_:264588 a rdf:Statement ;
up:attribution _:264543 ;
rdf:subject ?gene3 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene3 .
_:264589 a rdf:Statement ;
up:attribution _:264544 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:264590 a rdf:Statement ;
up:attribution _:264545 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation5 .
_:264591 a rdf:Statement ;
up:attribution _:264546 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:264592 a rdf:Statement ;
up:attribution _:264547 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:264593 a rdf:Statement ;
up:attribution _:264548 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:264594 a rdf:Statement ;
up:attribution _:264549 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:264595 a rdf:Statement ;
up:attribution _:264550 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation11 .
_:264596 a rdf:Statement ;
up:attribution _:264551 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation13 .
_:264597 a rdf:Statement ;
up:attribution _:264552 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:106 .
_:264598 a rdf:Statement ;
up:attribution _:264553 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:186 .
_:264599 a rdf:Statement ;
up:attribution _:264554 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:264600 a rdf:Statement ;
up:attribution _:264555 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:264601 a rdf:Statement ;
up:attribution _:264556 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:574 .
_:264602 a rdf:Statement ;
up:attribution _:264557 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:732 .
_:264603 a rdf:Statement ;
up:attribution _:264558 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005509 .
_:264604 a rdf:Statement ;
up:attribution _:264559 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005507 .
_:264605 a rdf:Statement ;
up:attribution _:264560 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0050304 .
_:264606 a rdf:Statement ;
up:attribution _:264561 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042597 .
_:264607 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:264608 a rdf:Statement ;
up:attribution _:264562 ;
rdf:subject ?pfs15 ;
rdf:predicate up:annotation ;
rdf:object ?annotation16 .
_:264609 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs21 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
_:264610 a rdf:Statement ;
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rdf:subject ?pfs21 ;
rdf:predicate up:annotation ;
rdf:object ?annotation22 .
_:264611 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs21 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:264612 a rdf:Statement ;
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rdf:subject ?pfs21 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:264613 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:264614 a rdf:Statement ;
up:attribution _:264565 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation35 .
_:264615 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:264616 a rdf:Statement ;
up:attribution _:264566 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:264617 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:264618 a rdf:Statement ;
up:attribution _:264567 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation47 .
_:264619 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:264620 a rdf:Statement ;
up:attribution _:264568 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation53 .
_:264621 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
_:264622 a rdf:Statement ;
up:attribution _:264569 ;
rdf:subject ?pfs34 ;
rdf:predicate up:annotation ;
rdf:object ?annotation59 .
_:264623 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation66 .
_:264624 a rdf:Statement ;
up:attribution _:264570 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation66 .
_:264625 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation72 .
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up:attribution _:264571 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation72 .
_:264627 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
_:264628 a rdf:Statement ;
up:attribution _:264572 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation78 .
_:264629 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation84 .
_:264630 a rdf:Statement ;
up:attribution _:264573 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation84 .
_:264631 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation90 .
_:264632 a rdf:Statement ;
up:attribution _:264574 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation90 .
_:264633 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation96 .
_:264634 a rdf:Statement ;
up:attribution _:264575 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation96 .
_:264635 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation102 .
_:264636 a rdf:Statement ;
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rdf:subject ?pfs65 ;
rdf:predicate up:annotation ;
rdf:object ?annotation102 .
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up:source unirule:MF_00716 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
_:264638 a rdf:Statement ;
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rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation109 .
_:264639 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
_:264640 a rdf:Statement ;
up:attribution _:264578 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
_:264641 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation121 .
_:264642 a rdf:Statement ;
up:attribution _:264579 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation121 .
_:264643 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:264644 a rdf:Statement ;
up:attribution _:264580 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation127 .
_:264645 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation133 .
_:264646 a rdf:Statement ;
up:attribution _:264581 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation133 .
_:264647 a rdf:Statement ;
up:source unirule:MF_00716 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation139 .
_:264648 a rdf:Statement ;
up:attribution _:264582 ;
rdf:subject ?pfs108 ;
rdf:predicate up:annotation ;
rdf:object ?annotation139 .
_:264649 a rdf:Statement ;
up:attribution _:264583 ;
rdf:subject ?sam145 ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:732 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00716
#Rule MF_00716 Created by:? on:2005-02-28 Modified by:Catherine Rivoire on:2025-10-02
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00716 .
?thisOrganism rdfs:subClassOf+ taxon:3379134 .
BIND(URI(CONCAT(STR(?this), '#MF_00716a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a2')) AS ?name2) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a9')) AS ?annotation9) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a11')) AS ?annotation11) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a13')) AS ?annotation13) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch156 faldo:location ?templateMotifSequenceMatchRegionQ51705157 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ51705159 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ51705MF_00716152 .
?templateMotifSequenceMatchRegionQ51705157 faldo:begin ?templateMotifSequenceMatchBeginQ51705158 .
?templateMotifSequenceMatchBeginQ51705158 faldo:position ?templateMotifSequenceMatchBeginPositionQ51705153 ;
faldo:reference isoform:Q51705-1 .
?templateMotifSequenceProfileAlignmentOperationQ51705159 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
?targetMotifMatch160 faldo:location ?targetMotifMatchRegionMatch161 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00716163 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ51705MF_00716154 .
?targetMotifMatchRegionMatch161 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00716162 .
?targetMotifMatchRegionMatchBeginMF_00716162 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00716155 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00716163 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716152, 1, (STRLEN(?templateMotifCigarQ51705MF_00716152) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716152, CONCAT('^(?:-*[^-]){', STR(((554 - ?templateMotifSequenceMatchBeginPositionQ51705153) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1164) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716154, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716154) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716154, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1164), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716154, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716154) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716154, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1164), '}'), '')))), '[^-]', ''))) AS ?step2165) .
BIND(((?step2165 + ?targetMotifMatchRegionMatchBeginPositionMF_00716155) - 1) AS ?thisPositionOn19) .
BIND(STRLEN(?thisSequenceValue) AS ?thisPositionOn20) .
BIND(?this AS ?pfs1t166) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfsb17) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn20))) AS ?pfse18) .
FILTER ((BOUND(?thisPositionOn19) && BOUND(?thisPositionOn20))) .
BIND(URI(CONCAT(STR(?this), '#MF_00716a16')) AS ?annotation16) .
BIND(?this AS ?pfs15) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch171 faldo:location ?templateMotifSequenceMatchRegionQ51705172 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ51705174 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ51705MF_00716167 .
?templateMotifSequenceMatchRegionQ51705172 faldo:begin ?templateMotifSequenceMatchBeginQ51705173 .
?templateMotifSequenceMatchBeginQ51705173 faldo:position ?templateMotifSequenceMatchBeginPositionQ51705168 ;
faldo:reference isoform:Q51705-1 .
?templateMotifSequenceProfileAlignmentOperationQ51705174 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
?targetMotifMatch175 faldo:location ?targetMotifMatchRegionMatch176 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00716178 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ51705MF_00716169 .
?targetMotifMatchRegionMatch176 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00716177 .
?targetMotifMatchRegionMatchBeginMF_00716177 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00716170 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00716178 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716167, 1, (STRLEN(?templateMotifCigarQ51705MF_00716167) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716167, CONCAT('^(?:-*[^-]){', STR(((464 - ?templateMotifSequenceMatchBeginPositionQ51705168) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1179) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716169, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716169) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1179), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716169, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716169) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1179), '}'), '')))), '[^-]', ''))) AS ?step2180) .
BIND(((?step2180 + ?targetMotifMatchRegionMatchBeginPositionMF_00716170) - 1) AS ?thisPositionOn26) .
BIND(?thisPositionOn26 AS ?thisPositionOn27) .
BIND(?this AS ?pfs2t181) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfsb23) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn27))) AS ?pfse24) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn26, 1) = 'K')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716167, 1, (STRLEN(?templateMotifCigarQ51705MF_00716167) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716167, CONCAT('^(?:-*[^-]){', STR(((479 - ?templateMotifSequenceMatchBeginPositionQ51705168) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1182) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716169, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716169) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716169, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716169) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716169, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1182), '}'), '')))), '[^-]', ''))) AS ?step2183) .
BIND(((?step2183 + ?targetMotifMatchRegionMatchBeginPositionMF_00716170) - 1) AS ?thisPositionOn32) .
BIND(?thisPositionOn32 AS ?thisPositionOn33) .
BIND(?this AS ?pfs2t184) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfsb29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn33))) AS ?pfse30) .
FILTER (REGEX('[ED]', SUBSTR(?thisSequenceValue, ?thisPositionOn32, 1))) .
BIND(?this AS ?pfs21) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch189 faldo:location ?templateMotifSequenceMatchRegionQ51705190 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ51705192 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ51705MF_00716185 .
?templateMotifSequenceMatchRegionQ51705190 faldo:begin ?templateMotifSequenceMatchBeginQ51705191 .
?templateMotifSequenceMatchBeginQ51705191 faldo:position ?templateMotifSequenceMatchBeginPositionQ51705186 ;
faldo:reference isoform:Q51705-1 .
?templateMotifSequenceProfileAlignmentOperationQ51705192 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
?targetMotifMatch193 faldo:location ?targetMotifMatchRegionMatch194 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00716196 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ51705MF_00716187 .
?targetMotifMatchRegionMatch194 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00716195 .
?targetMotifMatchRegionMatchBeginMF_00716195 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00716188 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00716196 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716185, 1, (STRLEN(?templateMotifCigarQ51705MF_00716185) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716185, CONCAT('^(?:-*[^-]){', STR(((271 - ?templateMotifSequenceMatchBeginPositionQ51705186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1197) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1197), '}'), '')))), '[^-]', ''))) AS ?step2198) .
BIND(((?step2198 + ?targetMotifMatchRegionMatchBeginPositionMF_00716188) - 1) AS ?thisPositionOn39) .
BIND(?thisPositionOn39 AS ?thisPositionOn40) .
BIND(?this AS ?pfs3t199) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfsb36) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn40))) AS ?pfse37) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn39, 1) = 'Y')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716185, 1, (STRLEN(?templateMotifCigarQ51705MF_00716185) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716185, CONCAT('^(?:-*[^-]){', STR(((274 - ?templateMotifSequenceMatchBeginPositionQ51705186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1200) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1200), '}'), '')))), '[^-]', ''))) AS ?step2201) .
BIND(((?step2201 + ?targetMotifMatchRegionMatchBeginPositionMF_00716188) - 1) AS ?thisPositionOn45) .
BIND(?thisPositionOn45 AS ?thisPositionOn46) .
BIND(?this AS ?pfs3t202) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'E')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716185, 1, (STRLEN(?templateMotifCigarQ51705MF_00716185) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716185, CONCAT('^(?:-*[^-]){', STR(((282 - ?templateMotifSequenceMatchBeginPositionQ51705186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1203) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1203), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1203), '}'), '')))), '[^-]', ''))) AS ?step2204) .
BIND(((?step2204 + ?targetMotifMatchRegionMatchBeginPositionMF_00716188) - 1) AS ?thisPositionOn51) .
BIND(?thisPositionOn51 AS ?thisPositionOn52) .
BIND(?this AS ?pfs3t205) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn51))) AS ?pfsb48) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfse49) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn51, 1) = 'M')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716185, 1, (STRLEN(?templateMotifCigarQ51705MF_00716185) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716185, CONCAT('^(?:-*[^-]){', STR(((288 - ?templateMotifSequenceMatchBeginPositionQ51705186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1206) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1206), '}'), '')))), '[^-]', ''))) AS ?step2207) .
BIND(((?step2207 + ?targetMotifMatchRegionMatchBeginPositionMF_00716188) - 1) AS ?thisPositionOn57) .
BIND(?thisPositionOn57 AS ?thisPositionOn58) .
BIND(?this AS ?pfs3t208) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfsb54) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn58))) AS ?pfse55) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn57, 1) = 'D')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716185, 1, (STRLEN(?templateMotifCigarQ51705MF_00716185) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716185, CONCAT('^(?:-*[^-]){', STR(((335 - ?templateMotifSequenceMatchBeginPositionQ51705186) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1209) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1209), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716187, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716187) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716187, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1209), '}'), '')))), '[^-]', ''))) AS ?step2210) .
BIND(((?step2210 + ?targetMotifMatchRegionMatchBeginPositionMF_00716188) - 1) AS ?thisPositionOn63) .
BIND(?thisPositionOn63 AS ?thisPositionOn64) .
BIND(?this AS ?pfs3t211) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) .
FILTER (REGEX('[NS]', SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1))) .
BIND(?this AS ?pfs34) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch216 faldo:location ?templateMotifSequenceMatchRegionQ51705217 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ51705219 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ51705MF_00716212 .
?templateMotifSequenceMatchRegionQ51705217 faldo:begin ?templateMotifSequenceMatchBeginQ51705218 .
?templateMotifSequenceMatchBeginQ51705218 faldo:position ?templateMotifSequenceMatchBeginPositionQ51705213 ;
faldo:reference isoform:Q51705-1 .
?templateMotifSequenceProfileAlignmentOperationQ51705219 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
?targetMotifMatch220 faldo:location ?targetMotifMatchRegionMatch221 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00716223 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ51705MF_00716214 .
?targetMotifMatchRegionMatch221 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00716222 .
?targetMotifMatchRegionMatchBeginMF_00716222 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00716215 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00716223 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((145 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1224) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1224), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1224), '}'), '')))), '[^-]', ''))) AS ?step2225) .
BIND(((?step2225 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn70) .
BIND(?thisPositionOn70 AS ?thisPositionOn71) .
BIND(?this AS ?pfs4t226) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((146 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1227) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1227), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1227), '}'), '')))), '[^-]', ''))) AS ?step2228) .
BIND(((?step2228 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn76) .
BIND(?thisPositionOn76 AS ?thisPositionOn77) .
BIND(?this AS ?pfs4t229) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn76))) AS ?pfsb73) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfse74) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn76, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) .
BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn82) .
BIND(?thisPositionOn82 AS ?thisPositionOn83) .
BIND(?this AS ?pfs4t232) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn82))) AS ?pfsb79) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn83))) AS ?pfse80) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn82, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((337 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1233) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1233), '}'), '')))), '[^-]', ''))) AS ?step2234) .
BIND(((?step2234 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn88) .
BIND(?thisPositionOn88 AS ?thisPositionOn89) .
BIND(?this AS ?pfs4t235) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfsb85) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn89))) AS ?pfse86) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn88, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((392 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1236) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1236), '}'), '')))), '[^-]', ''))) AS ?step2237) .
BIND(((?step2237 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn94) .
BIND(?thisPositionOn94 AS ?thisPositionOn95) .
BIND(?this AS ?pfs4t238) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb91) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse92) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn94, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((443 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1239) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1239), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1239), '}'), '')))), '[^-]', ''))) AS ?step2240) .
BIND(((?step2240 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn100) .
BIND(?thisPositionOn100 AS ?thisPositionOn101) .
BIND(?this AS ?pfs4t241) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn100))) AS ?pfsb97) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfse98) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn100, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716212, 1, (STRLEN(?templateMotifCigarQ51705MF_00716212) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716212, CONCAT('^(?:-*[^-]){', STR(((504 - ?templateMotifSequenceMatchBeginPositionQ51705213) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1242) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1242), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716214, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716214) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716214, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1242), '}'), '')))), '[^-]', ''))) AS ?step2243) .
BIND(((?step2243 + ?targetMotifMatchRegionMatchBeginPositionMF_00716215) - 1) AS ?thisPositionOn106) .
BIND(?thisPositionOn106 AS ?thisPositionOn107) .
BIND(?this AS ?pfs4t244) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfsb103) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn107))) AS ?pfse104) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn106, 1) = 'H')) .
BIND(?this AS ?pfs65) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch249 faldo:location ?templateMotifSequenceMatchRegionQ51705250 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationQ51705252 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarQ51705MF_00716245 .
?templateMotifSequenceMatchRegionQ51705250 faldo:begin ?templateMotifSequenceMatchBeginQ51705251 .
?templateMotifSequenceMatchBeginQ51705251 faldo:position ?templateMotifSequenceMatchBeginPositionQ51705246 ;
faldo:reference isoform:Q51705-1 .
?templateMotifSequenceProfileAlignmentOperationQ51705252 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
?targetMotifMatch253 faldo:location ?targetMotifMatchRegionMatch254 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00716256 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarQ51705MF_00716247 .
?targetMotifMatchRegionMatch254 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00716255 .
?targetMotifMatchRegionMatchBeginMF_00716255 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00716248 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00716256 edam:has_input signature:MF_00716 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716245, 1, (STRLEN(?templateMotifCigarQ51705MF_00716245) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716245, CONCAT('^(?:-*[^-]){', STR(((595 - ?templateMotifSequenceMatchBeginPositionQ51705246) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1257) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1257), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1257), '}'), '')))), '[^-]', ''))) AS ?step2258) .
BIND(((?step2258 + ?targetMotifMatchRegionMatchBeginPositionMF_00716248) - 1) AS ?thisPositionOn113) .
BIND(?thisPositionOn113 AS ?thisPositionOn114) .
BIND(?this AS ?pfs5t259) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfsb110) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn114))) AS ?pfse111) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn113, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716245, 1, (STRLEN(?templateMotifCigarQ51705MF_00716245) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716245, CONCAT('^(?:-*[^-]){', STR(((630 - ?templateMotifSequenceMatchBeginPositionQ51705246) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1260) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), '')))), '[^-]', ''))) AS ?step2261) .
BIND(((?step2261 + ?targetMotifMatchRegionMatchBeginPositionMF_00716248) - 1) AS ?thisPositionOn119) .
BIND(?thisPositionOn119 AS ?thisPositionOn120) .
BIND(?this AS ?pfs5t262) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716245, 1, (STRLEN(?templateMotifCigarQ51705MF_00716245) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716245, CONCAT('^(?:-*[^-]){', STR(((632 - ?templateMotifSequenceMatchBeginPositionQ51705246) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1263) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1263), '}'), '')))), '[^-]', ''))) AS ?step2264) .
BIND(((?step2264 + ?targetMotifMatchRegionMatchBeginPositionMF_00716248) - 1) AS ?thisPositionOn125) .
BIND(?thisPositionOn125 AS ?thisPositionOn126) .
BIND(?this AS ?pfs5t265) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn125))) AS ?pfsb122) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfse123) .
FILTER (REGEX('[WNH]', SUBSTR(?thisSequenceValue, ?thisPositionOn125, 1))) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716245, 1, (STRLEN(?templateMotifCigarQ51705MF_00716245) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716245, CONCAT('^(?:-*[^-]){', STR(((634 - ?templateMotifSequenceMatchBeginPositionQ51705246) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1266) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1266), '}'), '')))), '[^-]', ''))) AS ?step2267) .
BIND(((?step2267 + ?targetMotifMatchRegionMatchBeginPositionMF_00716248) - 1) AS ?thisPositionOn131) .
BIND(?thisPositionOn131 AS ?thisPositionOn132) .
BIND(?this AS ?pfs5t268) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn131))) AS ?pfsb128) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn132))) AS ?pfse129) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn131, 1) = 'C')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716245, 1, (STRLEN(?templateMotifCigarQ51705MF_00716245) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716245, CONCAT('^(?:-*[^-]){', STR(((638 - ?templateMotifSequenceMatchBeginPositionQ51705246) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1269) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1269), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1269), '}'), '')))), '[^-]', ''))) AS ?step2270) .
BIND(((?step2270 + ?targetMotifMatchRegionMatchBeginPositionMF_00716248) - 1) AS ?thisPositionOn137) .
BIND(?thisPositionOn137 AS ?thisPositionOn138) .
BIND(?this AS ?pfs5t271) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfsb134) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn138))) AS ?pfse135) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn137, 1) = 'H')) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarQ51705MF_00716245, 1, (STRLEN(?templateMotifCigarQ51705MF_00716245) - STRLEN(REPLACE(?templateMotifCigarQ51705MF_00716245, CONCAT('^(?:-*[^-]){', STR(((641 - ?templateMotifSequenceMatchBeginPositionQ51705246) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1272) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarQ51705MF_00716247, 1, (STRLEN(?targetMotifMatchCigarQ51705MF_00716247) - STRLEN(REPLACE(?targetMotifMatchCigarQ51705MF_00716247, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1272), '}'), '')))), '[^-]', ''))) AS ?step2273) .
BIND(((?step2273 + ?targetMotifMatchRegionMatchBeginPositionMF_00716248) - 1) AS ?thisPositionOn143) .
BIND(?thisPositionOn143 AS ?thisPositionOn144) .
BIND(?this AS ?pfs5t274) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfsb140) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfse141) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn143, 1) = 'M')) .
BIND(?this AS ?pfs108) .
}
OPTIONAL {
?this a up:Protein .
?this rdfs:seeAlso .
BIND(?this AS ?case14) .
}
OPTIONAL {
?this up:annotation ?samsignal275 ;
up:sequence ?thisSequence .
?samsignal275 up:range ?samsignalr276 ;
rdf:type up:Signal_Peptide_Annotation .
?samsignalr276 faldo:begin ?samsignalb277 ;
faldo:end ?samsignale278 .
?samsignalb277 faldo:position ?samsignalbp279 ;
faldo:reference ?thisSequence .
?samsignale278 faldo:position ?samsignalep280 ;
faldo:reference ?thisSequence .
BIND(?this AS ?sam145) .
}
BIND(URI(CONCAT(STR(?this), '#MF_00716a151')) AS ?keyword151) .
}
"xsd:string |
