| http://purl.uniprot.org/unirules/MF_02067#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:731526 up:source unirule:MF_02067 .
_:731527 up:source unirule:MF_02067 .
_:731528 up:source unirule:MF_02067 .
_:731529 up:source unirule:MF_02067 .
_:731530 up:source unirule:MF_02067 .
_:731531 up:source unirule:MF_02067 .
_:731532 up:source unirule:MF_02067 .
_:731533 up:source unirule:MF_02067 .
_:731534 up:source unirule:MF_02067 .
_:731535 up:source unirule:MF_02067 .
_:731536 up:source unirule:MF_02067 .
_:731537 up:source unirule:MF_02067 .
_:731538 up:source unirule:MF_02067 .
_:731539 up:source unirule:MF_02067 .
_:731540 up:source unirule:MF_02067 .
_:731541 up:source unirule:MF_02067 .
_:731542 up:source unirule:MF_02067 .
_:731543 up:source unirule:MF_02067 .
_:731544 up:source unirule:MF_02067 .
_:731545 up:source unirule:MF_02067 .
_:731546 up:source unirule:MF_02067 .
_:731547 up:source unirule:MF_02067 .
_:731548 up:source unirule:MF_02067 .
_:731549 up:source unirule:MF_02067 .
_:731550 up:source unirule:MF_02067 .
_:731551 up:source unirule:MF_02067 .
_:731552 up:source unirule:MF_02067 .
_:731553 up:source unirule:MF_02067 .
_:731554 up:source unirule:MF_02067 .
_:731555 up:source unirule:MF_02067 .
_:731556 up:source unirule:MF_02067 .
_:731557 up:source unirule:MF_02067 .
_:731558 up:source unirule:MF_02067 .
_:731559 up:source unirule:MF_02067 .
_:731560 up:source unirule:MF_02067 .
_:731561 up:source unirule:MF_02067 .
_:731562 up:source unirule:MF_02067 .
_:731563 up:source unirule:MF_02067 .
_:731564 up:source unirule:MF_02067 .
_:731565 up:source unirule:MF_02067 .
_:731566 up:source unirule:MF_02067 .
_:731567 up:source unirule:MF_02067 .
_:731568 up:source unirule:MF_02067 .
_:731569 up:source unirule:MF_02067 .
_:731570 up:source unirule:MF_02067 .
_:731571 up:source unirule:MF_02067 .
_:731572 up:source unirule:MF_02067 .
_:731573 up:source unirule:MF_02067 .
?this up:annotation ?annotation2 ,
?annotation3 ,
?annotation5 ,
?annotation7 ,
?annotation8 ,
?annotation9 ,
?annotation10 ,
?annotation11 ;
up:classifiedWith GO:0000287 ,
GO:0004332 ,
GO:0006094 ,
GO:0042132 ,
keyword:119 ,
keyword:312 ,
keyword:378 ,
keyword:456 ,
keyword:460 ,
keyword:479 ,
keyword:704 ;
up:recommendedName ?name0 .
?name0 up:ecName '3.1.3.11' ,
'4.1.2.13' ;
up:fullName 'Fructose-1,6-bisphosphate aldolase/phosphatase' ;
up:shortName 'FBP A/P' ,
'FBP aldolase/phosphatase' ;
rdf:type up:Structured_Name .
?gene1 skos:prefLabel 'fbp' .
?annotation2 a up:Function_Annotation ;
rdfs:comment 'Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).' .
?annotation3 up:activity ?activity4 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity4 up:catalyticActivity ;
up:enzymeClass .
?annotation5 up:activity ?activity6 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity6 up:catalyticActivity ;
up:enzymeClass .
?annotation7 up:cofactor chebi:18420 ;
rdf:type up:Cofactor_Annotation .
?annotation8 a up:Pathway_Annotation ;
rdfs:comment 'Carbohydrate biosynthesis; gluconeogenesis.' .
?annotation9 a up:Subunit_Annotation ;
rdfs:comment 'Homooctamer; dimer of tetramers.' .
?annotation10 a up:Domain_Annotation ;
rdfs:comment 'Consists of a single catalytic domain, but remodels its active-site architecture via a large structural change to exhibit dual activities.' .
?annotation11 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the FBP aldolase/phosphatase family.' .
?pfs12 up:annotation ?annotation13 .
?annotation13 faldo:begin ?pfsb14 ;
faldo:end ?pfse15 ;
up:ligand ?ligand16 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb14 faldo:position ?thisPositionOn17 ;
rdf:type faldo:ExactPosition .
?pfse15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?ligand16 rdfs:subClassOf chebi:32966 .
?pfs19 up:annotation ?annotation20 .
?annotation20 faldo:begin ?pfsb21 ;
faldo:end ?pfse22 ;
up:ligand ?ligand23 ;
rdf:type up:Binding_Site_Annotation .
?pfsb21 faldo:position ?thisPositionOn24 ;
rdf:type faldo:ExactPosition .
?pfse22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?ligand23 rdfs:subClassOf chebi:32966 .
?pfs26 up:annotation ?annotation27 .
?annotation27 faldo:begin ?pfsb28 ;
faldo:end ?pfse29 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton acceptor; for FBP phosphatase activity' .
?pfsb28 faldo:position ?thisPositionOn30 ;
rdf:type faldo:ExactPosition .
?pfse29 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfs32 up:annotation ?annotation33 .
?annotation33 faldo:begin ?pfsb34 ;
faldo:end ?pfse35 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor/acceptor; for FBP aldolase activity' .
?pfsb34 faldo:position ?thisPositionOn36 ;
rdf:type faldo:ExactPosition .
?pfse35 faldo:position ?thisPositionOn37 ;
rdf:type faldo:ExactPosition .
?pfs38 up:annotation ?annotation39 .
?annotation39 faldo:begin ?pfsb40 ;
faldo:end ?pfse41 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Schiff-base intermediate with DHAP; for FBP aldolase activity' .
?pfsb40 faldo:position ?thisPositionOn42 ;
rdf:type faldo:ExactPosition .
?pfse41 faldo:position ?thisPositionOn43 ;
rdf:type faldo:ExactPosition .
?pfs44 up:annotation ?annotation45 .
?annotation45 faldo:begin ?pfsb46 ;
faldo:end ?pfse47 ;
up:ligand ?ligand48 ;
rdf:type up:Binding_Site_Annotation .
?pfsb46 faldo:position ?thisPositionOn49 ;
rdf:type faldo:ExactPosition .
?pfse47 faldo:position ?thisPositionOn50 ;
rdf:type faldo:ExactPosition .
?ligand48 rdfs:subClassOf chebi:18420 .
?pfs51 up:annotation ?annotation52 .
?annotation52 faldo:begin ?pfsb53 ;
faldo:end ?pfse54 ;
up:ligand ?ligand55 ;
rdf:type up:Binding_Site_Annotation .
?pfsb53 faldo:position ?thisPositionOn56 ;
rdf:type faldo:ExactPosition .
?pfse54 faldo:position ?thisPositionOn57 ;
rdf:type faldo:ExactPosition .
?ligand55 rdfs:subClassOf chebi:18420 .
?pfs58 up:annotation ?annotation59 .
?annotation59 faldo:begin ?pfsb60 ;
faldo:end ?pfse61 ;
up:ligand ?ligand62 ;
rdf:type up:Binding_Site_Annotation .
?pfsb60 faldo:position ?thisPositionOn63 ;
rdf:type faldo:ExactPosition .
?pfse61 faldo:position ?thisPositionOn64 ;
rdf:type faldo:ExactPosition .
?ligand62 rdfs:subClassOf chebi:18420 .
?pfs65 up:annotation ?annotation66 .
?annotation66 faldo:begin ?pfsb67 ;
faldo:end ?pfse68 ;
up:ligand ?ligand69 ;
rdf:type up:Binding_Site_Annotation .
?pfsb67 faldo:position ?thisPositionOn70 ;
rdf:type faldo:ExactPosition .
?pfse68 faldo:position ?thisPositionOn71 ;
rdf:type faldo:ExactPosition .
?ligand69 rdfs:subClassOf chebi:18420 .
?pfs72 up:annotation ?annotation73 .
?annotation73 faldo:begin ?pfsb74 ;
faldo:end ?pfse75 ;
up:ligand ?ligand76 ;
rdf:type up:Binding_Site_Annotation .
?pfsb74 faldo:position ?thisPositionOn77 ;
rdf:type faldo:ExactPosition .
?pfse75 faldo:position ?thisPositionOn78 ;
rdf:type faldo:ExactPosition .
?ligand76 rdfs:subClassOf chebi:18420 .
?pfs79 up:annotation ?annotation80 .
?annotation80 faldo:begin ?pfsb81 ;
faldo:end ?pfse82 ;
up:ligand ?ligand83 ;
rdf:type up:Binding_Site_Annotation .
?pfsb81 faldo:position ?thisPositionOn84 ;
rdf:type faldo:ExactPosition .
?pfse82 faldo:position ?thisPositionOn85 ;
rdf:type faldo:ExactPosition .
?ligand83 rdfs:subClassOf chebi:18420 .
?pfs86 up:annotation ?annotation87 .
?annotation87 faldo:begin ?pfsb88 ;
faldo:end ?pfse89 ;
up:ligand ?ligand90 ;
rdf:type up:Binding_Site_Annotation .
?pfsb88 faldo:position ?thisPositionOn91 ;
rdf:type faldo:ExactPosition .
?pfse89 faldo:position ?thisPositionOn92 ;
rdf:type faldo:ExactPosition .
?ligand90 rdfs:subClassOf chebi:18420 .
?pfs93 up:annotation ?annotation94 .
?annotation94 faldo:begin ?pfsb95 ;
faldo:end ?pfse96 ;
up:ligand ?ligand97 ;
rdf:type up:Binding_Site_Annotation .
?pfsb95 faldo:position ?thisPositionOn98 ;
rdf:type faldo:ExactPosition .
?pfse96 faldo:position ?thisPositionOn99 ;
rdf:type faldo:ExactPosition .
?ligand97 rdfs:subClassOf chebi:18420 .
?pfs100 up:annotation ?annotation101 .
?annotation101 faldo:begin ?pfsb102 ;
faldo:end ?pfse103 ;
up:ligand ?ligand104 ;
rdf:type up:Binding_Site_Annotation .
?pfsb102 faldo:position ?thisPositionOn105 ;
rdf:type faldo:ExactPosition .
?pfse103 faldo:position ?thisPositionOn106 ;
rdf:type faldo:ExactPosition .
?ligand104 rdfs:subClassOf chebi:18420 .
?pfs107 up:annotation ?annotation108 .
?annotation108 faldo:begin ?pfsb109 ;
faldo:end ?pfse110 ;
up:ligand ?ligand111 ;
rdf:type up:Binding_Site_Annotation .
?pfsb109 faldo:position ?thisPositionOn112 ;
rdf:type faldo:ExactPosition .
?pfse110 faldo:position ?thisPositionOn113 ;
rdf:type faldo:ExactPosition .
?ligand111 rdfs:subClassOf chebi:18420 .
?pfs114 up:annotation ?annotation115 .
?annotation115 faldo:begin ?pfsb116 ;
faldo:end ?pfse117 ;
up:ligand ?ligand118 ;
rdf:type up:Binding_Site_Annotation .
?pfsb116 faldo:position ?thisPositionOn119 ;
rdf:type faldo:ExactPosition .
?pfse117 faldo:position ?thisPositionOn120 ;
rdf:type faldo:ExactPosition .
?ligand118 rdfs:subClassOf chebi:18420 .
?pfs121 up:annotation ?annotation122 .
?annotation122 faldo:begin ?pfsb123 ;
faldo:end ?pfse124 ;
up:ligand ?ligand125 ;
rdf:type up:Binding_Site_Annotation .
?pfsb123 faldo:position ?thisPositionOn126 ;
rdf:type faldo:ExactPosition .
?pfse124 faldo:position ?thisPositionOn127 ;
rdf:type faldo:ExactPosition .
?ligand125 rdfs:subClassOf chebi:18420 .
?pfs128 up:annotation ?annotation129 .
?annotation129 faldo:begin ?pfsb130 ;
faldo:end ?pfse131 ;
up:ligand ?ligand132 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb130 faldo:position ?thisPositionOn133 ;
rdf:type faldo:ExactPosition .
?pfse131 faldo:position ?thisPositionOn134 ;
rdf:type faldo:ExactPosition .
?ligand132 rdfs:subClassOf chebi:32966 .
?pfs135 up:annotation ?annotation136 .
?annotation136 faldo:begin ?pfsb137 ;
faldo:end ?pfse138 ;
up:ligand ?ligand139 ;
rdf:type up:Binding_Site_Annotation .
?pfsb137 faldo:position ?thisPositionOn140 ;
rdf:type faldo:ExactPosition .
?pfse138 faldo:position ?thisPositionOn141 ;
rdf:type faldo:ExactPosition .
?ligand139 rdfs:subClassOf chebi:57642 .
?pfs142 up:annotation ?annotation143 .
?annotation143 faldo:begin ?pfsb144 ;
faldo:end ?pfse145 ;
up:ligand ?ligand146 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb144 faldo:position ?thisPositionOn147 ;
rdf:type faldo:ExactPosition .
?pfse145 faldo:position ?thisPositionOn148 ;
rdf:type faldo:ExactPosition .
?ligand146 rdfs:subClassOf chebi:32966 .
?pfs149 up:annotation ?annotation150 .
?annotation150 faldo:begin ?pfsb151 ;
faldo:end ?pfse152 ;
up:ligand ?ligand153 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb151 faldo:position ?thisPositionOn154 ;
rdf:type faldo:ExactPosition .
?pfse152 faldo:position ?thisPositionOn155 ;
rdf:type faldo:ExactPosition .
?ligand153 rdfs:subClassOf chebi:32966 .
?pfs156 up:annotation ?annotation157 .
?annotation157 faldo:begin ?pfsb158 ;
faldo:end ?pfse159 ;
up:ligand ?ligand160 ;
rdf:type up:Binding_Site_Annotation .
?pfsb158 faldo:position ?thisPositionOn161 ;
rdf:type faldo:ExactPosition .
?pfse159 faldo:position ?thisPositionOn162 ;
rdf:type faldo:ExactPosition .
?ligand160 rdfs:subClassOf chebi:57642 .
?pfs163 up:annotation ?annotation164 .
?annotation164 faldo:begin ?pfsb165 ;
faldo:end ?pfse166 ;
up:ligand ?ligand167 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb165 faldo:position ?thisPositionOn168 ;
rdf:type faldo:ExactPosition .
?pfse166 faldo:position ?thisPositionOn169 ;
rdf:type faldo:ExactPosition .
?ligand167 rdfs:subClassOf chebi:32966 .
?pfs170 up:annotation ?annotation171 .
?annotation171 faldo:begin ?pfsb172 ;
faldo:end ?pfse173 ;
up:ligand ?ligand174 ;
rdf:type up:Binding_Site_Annotation .
?pfsb172 faldo:position ?thisPositionOn175 ;
rdf:type faldo:ExactPosition .
?pfse173 faldo:position ?thisPositionOn176 ;
rdf:type faldo:ExactPosition .
?ligand174 rdfs:subClassOf chebi:57642 .
?pfs177 up:annotation ?annotation178 .
?annotation178 faldo:begin ?pfsb179 ;
faldo:end ?pfse180 ;
up:ligand ?ligand181 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb179 faldo:position ?thisPositionOn182 ;
rdf:type faldo:ExactPosition .
?pfse180 faldo:position ?thisPositionOn183 ;
rdf:type faldo:ExactPosition .
?ligand181 rdfs:subClassOf chebi:32966 .
?pfs184 up:annotation ?annotation185 .
?annotation185 faldo:begin ?pfsb186 ;
faldo:end ?pfse187 ;
up:ligand ?ligand188 ;
rdf:type up:Binding_Site_Annotation .
?pfsb186 faldo:position ?thisPositionOn189 ;
rdf:type faldo:ExactPosition .
?pfse187 faldo:position ?thisPositionOn190 ;
rdf:type faldo:ExactPosition .
?ligand188 rdfs:subClassOf chebi:57642 .
?pfs191 up:annotation ?annotation192 .
?annotation192 faldo:begin ?pfsb193 ;
faldo:end ?pfse194 ;
up:ligand ?ligand195 ;
rdf:type up:Binding_Site_Annotation ;
rdfs:comment 'in other chain' .
?pfsb193 faldo:position ?thisPositionOn196 ;
rdf:type faldo:ExactPosition .
?pfse194 faldo:position ?thisPositionOn197 ;
rdf:type faldo:ExactPosition .
?ligand195 rdfs:subClassOf chebi:32966 .
_:731574 a rdf:Statement ;
up:attribution _:731526 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:731575 a rdf:Statement ;
up:attribution _:731527 ;
rdf:subject ?gene1 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene1 .
_:731576 a rdf:Statement ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation2 .
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:annotation ;
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:119 .
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
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rdf:subject ?this ;
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:704 .
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up:attribution _:731543 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0042132 .
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0004332 .
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0000287 .
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rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006094 .
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rdf:subject ?pfs12 ;
rdf:predicate up:annotation ;
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up:source unirule:MF_02067 ;
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rdf:predicate up:annotation ;
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up:source unirule:MF_02067 ;
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rdf:subject ?pfs107 ;
rdf:predicate up:annotation ;
rdf:object ?annotation108 .
_:731624 a rdf:Statement ;
up:attribution _:731561 ;
rdf:subject ?pfs107 ;
rdf:predicate up:annotation ;
rdf:object ?annotation108 .
_:731625 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs114 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
_:731626 a rdf:Statement ;
up:attribution _:731562 ;
rdf:subject ?pfs114 ;
rdf:predicate up:annotation ;
rdf:object ?annotation115 .
_:731627 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs121 ;
rdf:predicate up:annotation ;
rdf:object ?annotation122 .
_:731628 a rdf:Statement ;
up:attribution _:731563 ;
rdf:subject ?pfs121 ;
rdf:predicate up:annotation ;
rdf:object ?annotation122 .
_:731629 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs128 ;
rdf:predicate up:annotation ;
rdf:object ?annotation129 .
_:731630 a rdf:Statement ;
up:attribution _:731564 ;
rdf:subject ?pfs128 ;
rdf:predicate up:annotation ;
rdf:object ?annotation129 .
_:731631 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs135 ;
rdf:predicate up:annotation ;
rdf:object ?annotation136 .
_:731632 a rdf:Statement ;
up:attribution _:731565 ;
rdf:subject ?pfs135 ;
rdf:predicate up:annotation ;
rdf:object ?annotation136 .
_:731633 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs142 ;
rdf:predicate up:annotation ;
rdf:object ?annotation143 .
_:731634 a rdf:Statement ;
up:attribution _:731566 ;
rdf:subject ?pfs142 ;
rdf:predicate up:annotation ;
rdf:object ?annotation143 .
_:731635 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs149 ;
rdf:predicate up:annotation ;
rdf:object ?annotation150 .
_:731636 a rdf:Statement ;
up:attribution _:731567 ;
rdf:subject ?pfs149 ;
rdf:predicate up:annotation ;
rdf:object ?annotation150 .
_:731637 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs156 ;
rdf:predicate up:annotation ;
rdf:object ?annotation157 .
_:731638 a rdf:Statement ;
up:attribution _:731568 ;
rdf:subject ?pfs156 ;
rdf:predicate up:annotation ;
rdf:object ?annotation157 .
_:731639 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs163 ;
rdf:predicate up:annotation ;
rdf:object ?annotation164 .
_:731640 a rdf:Statement ;
up:attribution _:731569 ;
rdf:subject ?pfs163 ;
rdf:predicate up:annotation ;
rdf:object ?annotation164 .
_:731641 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs170 ;
rdf:predicate up:annotation ;
rdf:object ?annotation171 .
_:731642 a rdf:Statement ;
up:attribution _:731570 ;
rdf:subject ?pfs170 ;
rdf:predicate up:annotation ;
rdf:object ?annotation171 .
_:731643 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs177 ;
rdf:predicate up:annotation ;
rdf:object ?annotation178 .
_:731644 a rdf:Statement ;
up:attribution _:731571 ;
rdf:subject ?pfs177 ;
rdf:predicate up:annotation ;
rdf:object ?annotation178 .
_:731645 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs184 ;
rdf:predicate up:annotation ;
rdf:object ?annotation185 .
_:731646 a rdf:Statement ;
up:attribution _:731572 ;
rdf:subject ?pfs184 ;
rdf:predicate up:annotation ;
rdf:object ?annotation185 .
_:731647 a rdf:Statement ;
up:source unirule:MF_02067 ;
rdf:subject ?pfs191 ;
rdf:predicate up:annotation ;
rdf:object ?annotation192 .
_:731648 a rdf:Statement ;
up:attribution _:731573 ;
rdf:subject ?pfs191 ;
rdf:predicate up:annotation ;
rdf:object ?annotation192 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_02067
#Rule MF_02067 Created by:? on:2016-06-30 Modified by:Edouard de Castro on:2022-11-19
VALUES ?supertaxon198 {taxon:2 taxon:2157}
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_02067 .
?thisOrganism rdfs:subClassOf+ ?supertaxon198 .
BIND(URI(CONCAT(STR(?this), '#MF_02067a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a2')) AS ?annotation2) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a5')) AS ?annotation5) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a9')) AS ?annotation9) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a11')) AS ?annotation11) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch203 faldo:location ?templateMotifSequenceMatchRegionF9VMT6204 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6206 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067199 .
?templateMotifSequenceMatchRegionF9VMT6204 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6205 .
?templateMotifSequenceMatchBeginF9VMT6205 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6200 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6206 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch207 faldo:location ?targetMotifMatchRegionMatch208 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067210 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067201 .
?targetMotifMatchRegionMatch208 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067209 .
?targetMotifMatchRegionMatchBeginMF_02067209 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067202 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067210 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067199, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067199) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067199, CONCAT('^(?:-*[^-]){', STR(((103 - ?templateMotifSequenceMatchBeginPositionF9VMT6200) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1211) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067201, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067201) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067201, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1211), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067201, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067201) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067201, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1211), '}'), '')))), '[^-]', ''))) AS ?step2212) .
BIND(((?step2212 + ?targetMotifMatchRegionMatchBeginPositionMF_02067202) - 1) AS ?thisPositionOn17) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067199, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067199) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067199, CONCAT('^(?:-*[^-]){', STR(((104 - ?templateMotifSequenceMatchBeginPositionF9VMT6200) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1213) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067201, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067201) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067201, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067201, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067201) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067201, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), '')))), '[^-]', ''))) AS ?step2214) .
BIND(((?step2214 + ?targetMotifMatchRegionMatchBeginPositionMF_02067202) - 1) AS ?thisPositionOn18) .
BIND(?this AS ?pfs1t215) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn17))) AS ?pfsb14) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfse15) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn17, (?thisPositionOn18 - ?thisPositionOn17)) = 'GN')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a13')) AS ?annotation13) .
BIND(?this AS ?pfs12) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch220 faldo:location ?templateMotifSequenceMatchRegionF9VMT6221 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6223 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067216 .
?templateMotifSequenceMatchRegionF9VMT6221 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6222 .
?templateMotifSequenceMatchBeginF9VMT6222 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6217 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6223 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch224 faldo:location ?targetMotifMatchRegionMatch225 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067227 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067218 .
?targetMotifMatchRegionMatch225 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067226 .
?targetMotifMatchRegionMatchBeginMF_02067226 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067219 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067227 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067216, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067216) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067216, CONCAT('^(?:-*[^-]){', STR(((241 - ?templateMotifSequenceMatchBeginPositionF9VMT6217) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1228) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067218, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067218) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067218, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1228), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067218, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067218) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067218, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1228), '}'), '')))), '[^-]', ''))) AS ?step2229) .
BIND(((?step2229 + ?targetMotifMatchRegionMatchBeginPositionMF_02067219) - 1) AS ?thisPositionOn24) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067216, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067216) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067216, CONCAT('^(?:-*[^-]){', STR(((242 - ?templateMotifSequenceMatchBeginPositionF9VMT6217) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067218, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067218) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067218, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067218, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067218) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067218, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) .
BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_02067219) - 1) AS ?thisPositionOn25) .
BIND(?this AS ?pfs1t232) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn24))) AS ?pfsb21) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfse22) .
FILTER (REGEX('Q[HSK]', SUBSTR(?thisSequenceValue, ?thisPositionOn24, (?thisPositionOn25 - ?thisPositionOn24)))) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a20')) AS ?annotation20) .
BIND(?this AS ?pfs19) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch237 faldo:location ?templateMotifSequenceMatchRegionF9VMT6238 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6240 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067233 .
?templateMotifSequenceMatchRegionF9VMT6238 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6239 .
?templateMotifSequenceMatchBeginF9VMT6239 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6234 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6240 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch241 faldo:location ?targetMotifMatchRegionMatch242 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067244 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067235 .
?targetMotifMatchRegionMatch242 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067243 .
?targetMotifMatchRegionMatchBeginMF_02067243 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067236 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067244 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067233, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067233) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067233, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionF9VMT6234) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1245) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067235, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067235) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1245), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067235, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067235) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067235, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1245), '}'), '')))), '[^-]', ''))) AS ?step2246) .
BIND(((?step2246 + ?targetMotifMatchRegionMatchBeginPositionMF_02067236) - 1) AS ?thisPositionOn30) .
BIND(?thisPositionOn30 AS ?thisPositionOn31) .
BIND(?this AS ?pfs1t247) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn30))) AS ?pfsb28) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfse29) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn30, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a27')) AS ?annotation27) .
BIND(?this AS ?pfs26) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch252 faldo:location ?templateMotifSequenceMatchRegionF9VMT6253 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6255 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067248 .
?templateMotifSequenceMatchRegionF9VMT6253 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6254 .
?templateMotifSequenceMatchBeginF9VMT6254 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6249 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6255 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch256 faldo:location ?targetMotifMatchRegionMatch257 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067259 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067250 .
?targetMotifMatchRegionMatch257 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067258 .
?targetMotifMatchRegionMatchBeginMF_02067258 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067251 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067259 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067248, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067248) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067248, CONCAT('^(?:-*[^-]){', STR(((228 - ?templateMotifSequenceMatchBeginPositionF9VMT6249) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1260) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067250, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067250) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067250, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067250, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067250) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067250, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1260), '}'), '')))), '[^-]', ''))) AS ?step2261) .
BIND(((?step2261 + ?targetMotifMatchRegionMatchBeginPositionMF_02067251) - 1) AS ?thisPositionOn36) .
BIND(?thisPositionOn36 AS ?thisPositionOn37) .
BIND(?this AS ?pfs1t262) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn36))) AS ?pfsb34) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn37))) AS ?pfse35) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn36, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a33')) AS ?annotation33) .
BIND(?this AS ?pfs32) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch267 faldo:location ?templateMotifSequenceMatchRegionF9VMT6268 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6270 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067263 .
?templateMotifSequenceMatchRegionF9VMT6268 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6269 .
?templateMotifSequenceMatchBeginF9VMT6269 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6264 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6270 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch271 faldo:location ?targetMotifMatchRegionMatch272 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067274 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067265 .
?targetMotifMatchRegionMatch272 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067273 .
?targetMotifMatchRegionMatchBeginMF_02067273 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067266 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067274 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067263, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067263) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067263, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionF9VMT6264) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1275) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067265, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067265) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067265, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067265) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067265, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1275), '}'), '')))), '[^-]', ''))) AS ?step2276) .
BIND(((?step2276 + ?targetMotifMatchRegionMatchBeginPositionMF_02067266) - 1) AS ?thisPositionOn42) .
BIND(?thisPositionOn42 AS ?thisPositionOn43) .
BIND(?this AS ?pfs1t277) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn42))) AS ?pfsb40) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn43))) AS ?pfse41) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn42, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a39')) AS ?annotation39) .
BIND(?this AS ?pfs38) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch282 faldo:location ?templateMotifSequenceMatchRegionF9VMT6283 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6285 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067278 .
?templateMotifSequenceMatchRegionF9VMT6283 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6284 .
?templateMotifSequenceMatchBeginF9VMT6284 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6279 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6285 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch286 faldo:location ?targetMotifMatchRegionMatch287 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067289 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067280 .
?targetMotifMatchRegionMatch287 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067288 .
?targetMotifMatchRegionMatchBeginMF_02067288 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067281 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067289 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067278, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067278) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067278, CONCAT('^(?:-*[^-]){', STR(((11 - ?templateMotifSequenceMatchBeginPositionF9VMT6279) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1290) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067280, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067280) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067280, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067280) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067280, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1290), '}'), '')))), '[^-]', ''))) AS ?step2291) .
BIND(((?step2291 + ?targetMotifMatchRegionMatchBeginPositionMF_02067281) - 1) AS ?thisPositionOn49) .
BIND(?thisPositionOn49 AS ?thisPositionOn50) .
BIND(?this AS ?pfs1t292) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn49))) AS ?pfsb46) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn50))) AS ?pfse47) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn49, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a45')) AS ?annotation45) .
BIND(?this AS ?pfs44) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch297 faldo:location ?templateMotifSequenceMatchRegionF9VMT6298 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6300 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067293 .
?templateMotifSequenceMatchRegionF9VMT6298 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6299 .
?templateMotifSequenceMatchBeginF9VMT6299 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6294 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6300 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch301 faldo:location ?targetMotifMatchRegionMatch302 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067304 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067295 .
?targetMotifMatchRegionMatch302 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067303 .
?targetMotifMatchRegionMatchBeginMF_02067303 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067296 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067304 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067293, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067293) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067293, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionF9VMT6294) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1305) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067295, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067295) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067295, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067295) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067295, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1305), '}'), '')))), '[^-]', ''))) AS ?step2306) .
BIND(((?step2306 + ?targetMotifMatchRegionMatchBeginPositionMF_02067296) - 1) AS ?thisPositionOn56) .
BIND(?thisPositionOn56 AS ?thisPositionOn57) .
BIND(?this AS ?pfs1t307) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn56))) AS ?pfsb53) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn57))) AS ?pfse54) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn56, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a52')) AS ?annotation52) .
BIND(?this AS ?pfs51) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch312 faldo:location ?templateMotifSequenceMatchRegionF9VMT6313 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6315 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067308 .
?templateMotifSequenceMatchRegionF9VMT6313 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6314 .
?templateMotifSequenceMatchBeginF9VMT6314 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6309 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6315 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch316 faldo:location ?targetMotifMatchRegionMatch317 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067319 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067310 .
?targetMotifMatchRegionMatch317 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067318 .
?targetMotifMatchRegionMatchBeginMF_02067318 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067311 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067319 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067308, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067308) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067308, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionF9VMT6309) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1320) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067310, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067310) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067310, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1320), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067310, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067310) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067310, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1320), '}'), '')))), '[^-]', ''))) AS ?step2321) .
BIND(((?step2321 + ?targetMotifMatchRegionMatchBeginPositionMF_02067311) - 1) AS ?thisPositionOn63) .
BIND(?thisPositionOn63 AS ?thisPositionOn64) .
BIND(?this AS ?pfs1t322) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn63))) AS ?pfsb60) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn64))) AS ?pfse61) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn63, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a59')) AS ?annotation59) .
BIND(?this AS ?pfs58) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch327 faldo:location ?templateMotifSequenceMatchRegionF9VMT6328 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6330 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067323 .
?templateMotifSequenceMatchRegionF9VMT6328 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6329 .
?templateMotifSequenceMatchBeginF9VMT6329 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6324 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6330 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch331 faldo:location ?targetMotifMatchRegionMatch332 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067334 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067325 .
?targetMotifMatchRegionMatch332 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067333 .
?targetMotifMatchRegionMatchBeginMF_02067333 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067326 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067334 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067323, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067323) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067323, CONCAT('^(?:-*[^-]){', STR(((52 - ?templateMotifSequenceMatchBeginPositionF9VMT6324) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1335) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067325, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067325) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067325, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1335), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067325, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067325) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067325, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1335), '}'), '')))), '[^-]', ''))) AS ?step2336) .
BIND(((?step2336 + ?targetMotifMatchRegionMatchBeginPositionMF_02067326) - 1) AS ?thisPositionOn70) .
BIND(?thisPositionOn70 AS ?thisPositionOn71) .
BIND(?this AS ?pfs1t337) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn70))) AS ?pfsb67) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn71))) AS ?pfse68) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn70, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a66')) AS ?annotation66) .
BIND(?this AS ?pfs65) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch342 faldo:location ?templateMotifSequenceMatchRegionF9VMT6343 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6345 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067338 .
?templateMotifSequenceMatchRegionF9VMT6343 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6344 .
?templateMotifSequenceMatchBeginF9VMT6344 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6339 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6345 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch346 faldo:location ?targetMotifMatchRegionMatch347 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067349 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067340 .
?targetMotifMatchRegionMatch347 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067348 .
?targetMotifMatchRegionMatchBeginMF_02067348 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067341 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067349 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067338, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067338) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067338, CONCAT('^(?:-*[^-]){', STR(((53 - ?templateMotifSequenceMatchBeginPositionF9VMT6339) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1350) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067340, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067340) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067340, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1350), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067340, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067340) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067340, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1350), '}'), '')))), '[^-]', ''))) AS ?step2351) .
BIND(((?step2351 + ?targetMotifMatchRegionMatchBeginPositionMF_02067341) - 1) AS ?thisPositionOn77) .
BIND(?thisPositionOn77 AS ?thisPositionOn78) .
BIND(?this AS ?pfs1t352) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn77))) AS ?pfsb74) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn78))) AS ?pfse75) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn77, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a73')) AS ?annotation73) .
BIND(?this AS ?pfs72) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch357 faldo:location ?templateMotifSequenceMatchRegionF9VMT6358 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6360 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067353 .
?templateMotifSequenceMatchRegionF9VMT6358 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6359 .
?templateMotifSequenceMatchBeginF9VMT6359 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6354 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6360 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch361 faldo:location ?targetMotifMatchRegionMatch362 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067364 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067355 .
?targetMotifMatchRegionMatch362 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067363 .
?targetMotifMatchRegionMatchBeginMF_02067363 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067356 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067364 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067353, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067353) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067353, CONCAT('^(?:-*[^-]){', STR(((94 - ?templateMotifSequenceMatchBeginPositionF9VMT6354) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1365) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067355, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067355) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067355, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1365), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067355, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067355) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067355, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1365), '}'), '')))), '[^-]', ''))) AS ?step2366) .
BIND(((?step2366 + ?targetMotifMatchRegionMatchBeginPositionMF_02067356) - 1) AS ?thisPositionOn84) .
BIND(?thisPositionOn84 AS ?thisPositionOn85) .
BIND(?this AS ?pfs1t367) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn84))) AS ?pfsb81) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn85))) AS ?pfse82) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn84, 1) = 'Q')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a80')) AS ?annotation80) .
BIND(?this AS ?pfs79) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch372 faldo:location ?templateMotifSequenceMatchRegionF9VMT6373 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6375 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067368 .
?templateMotifSequenceMatchRegionF9VMT6373 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6374 .
?templateMotifSequenceMatchBeginF9VMT6374 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6369 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6375 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch376 faldo:location ?targetMotifMatchRegionMatch377 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067379 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067370 .
?targetMotifMatchRegionMatch377 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067378 .
?targetMotifMatchRegionMatchBeginMF_02067378 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067371 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067379 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067368, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067368) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067368, CONCAT('^(?:-*[^-]){', STR(((131 - ?templateMotifSequenceMatchBeginPositionF9VMT6369) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1380) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067370, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067370) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1380), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067370, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067370) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067370, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1380), '}'), '')))), '[^-]', ''))) AS ?step2381) .
BIND(((?step2381 + ?targetMotifMatchRegionMatchBeginPositionMF_02067371) - 1) AS ?thisPositionOn91) .
BIND(?thisPositionOn91 AS ?thisPositionOn92) .
BIND(?this AS ?pfs1t382) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn91))) AS ?pfsb88) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn92))) AS ?pfse89) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn91, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a87')) AS ?annotation87) .
BIND(?this AS ?pfs86) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch387 faldo:location ?templateMotifSequenceMatchRegionF9VMT6388 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6390 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067383 .
?templateMotifSequenceMatchRegionF9VMT6388 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6389 .
?templateMotifSequenceMatchBeginF9VMT6389 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6384 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6390 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch391 faldo:location ?targetMotifMatchRegionMatch392 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067394 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067385 .
?targetMotifMatchRegionMatch392 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067393 .
?targetMotifMatchRegionMatchBeginMF_02067393 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067386 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067394 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067383, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067383) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067383, CONCAT('^(?:-*[^-]){', STR(((231 - ?templateMotifSequenceMatchBeginPositionF9VMT6384) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1395) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067385, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067385) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1395), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067385, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067385) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067385, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1395), '}'), '')))), '[^-]', ''))) AS ?step2396) .
BIND(((?step2396 + ?targetMotifMatchRegionMatchBeginPositionMF_02067386) - 1) AS ?thisPositionOn98) .
BIND(?thisPositionOn98 AS ?thisPositionOn99) .
BIND(?this AS ?pfs1t397) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn98))) AS ?pfsb95) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn99))) AS ?pfse96) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn98, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a94')) AS ?annotation94) .
BIND(?this AS ?pfs93) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch402 faldo:location ?templateMotifSequenceMatchRegionF9VMT6403 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6405 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067398 .
?templateMotifSequenceMatchRegionF9VMT6403 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6404 .
?templateMotifSequenceMatchBeginF9VMT6404 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6399 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6405 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch406 faldo:location ?targetMotifMatchRegionMatch407 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067409 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067400 .
?targetMotifMatchRegionMatch407 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067408 .
?targetMotifMatchRegionMatchBeginMF_02067408 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067401 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067409 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067398, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067398) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067398, CONCAT('^(?:-*[^-]){', STR(((232 - ?templateMotifSequenceMatchBeginPositionF9VMT6399) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1410) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067400, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067400) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1410), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067400, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067400) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067400, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1410), '}'), '')))), '[^-]', ''))) AS ?step2411) .
BIND(((?step2411 + ?targetMotifMatchRegionMatchBeginPositionMF_02067401) - 1) AS ?thisPositionOn105) .
BIND(?thisPositionOn105 AS ?thisPositionOn106) .
BIND(?this AS ?pfs1t412) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn105))) AS ?pfsb102) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn106))) AS ?pfse103) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn105, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a101')) AS ?annotation101) .
BIND(?this AS ?pfs100) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch417 faldo:location ?templateMotifSequenceMatchRegionF9VMT6418 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6420 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067413 .
?templateMotifSequenceMatchRegionF9VMT6418 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6419 .
?templateMotifSequenceMatchBeginF9VMT6419 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6414 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6420 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch421 faldo:location ?targetMotifMatchRegionMatch422 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067424 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067415 .
?targetMotifMatchRegionMatch422 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067423 .
?targetMotifMatchRegionMatchBeginMF_02067423 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067416 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067424 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067413, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067413) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067413, CONCAT('^(?:-*[^-]){', STR(((232 - ?templateMotifSequenceMatchBeginPositionF9VMT6414) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1425) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067415, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067415) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067415, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067415, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067415) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067415, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1425), '}'), '')))), '[^-]', ''))) AS ?step2426) .
BIND(((?step2426 + ?targetMotifMatchRegionMatchBeginPositionMF_02067416) - 1) AS ?thisPositionOn112) .
BIND(?thisPositionOn112 AS ?thisPositionOn113) .
BIND(?this AS ?pfs1t427) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn112))) AS ?pfsb109) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn113))) AS ?pfse110) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn112, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a108')) AS ?annotation108) .
BIND(?this AS ?pfs107) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch432 faldo:location ?templateMotifSequenceMatchRegionF9VMT6433 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6435 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067428 .
?templateMotifSequenceMatchRegionF9VMT6433 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6434 .
?templateMotifSequenceMatchBeginF9VMT6434 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6429 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6435 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch436 faldo:location ?targetMotifMatchRegionMatch437 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067439 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067430 .
?targetMotifMatchRegionMatch437 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067438 .
?targetMotifMatchRegionMatchBeginMF_02067438 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067431 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067439 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067428, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067428) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067428, CONCAT('^(?:-*[^-]){', STR(((233 - ?templateMotifSequenceMatchBeginPositionF9VMT6429) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1440) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067430, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067430) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067430, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067430) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067430, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1440), '}'), '')))), '[^-]', ''))) AS ?step2441) .
BIND(((?step2441 + ?targetMotifMatchRegionMatchBeginPositionMF_02067431) - 1) AS ?thisPositionOn119) .
BIND(?thisPositionOn119 AS ?thisPositionOn120) .
BIND(?this AS ?pfs1t442) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn119))) AS ?pfsb116) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn120))) AS ?pfse117) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn119, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a115')) AS ?annotation115) .
BIND(?this AS ?pfs114) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch447 faldo:location ?templateMotifSequenceMatchRegionF9VMT6448 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6450 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067443 .
?templateMotifSequenceMatchRegionF9VMT6448 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6449 .
?templateMotifSequenceMatchBeginF9VMT6449 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6444 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6450 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch451 faldo:location ?targetMotifMatchRegionMatch452 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067454 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067445 .
?targetMotifMatchRegionMatch452 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067453 .
?targetMotifMatchRegionMatchBeginMF_02067453 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067446 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067454 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067443, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067443) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067443, CONCAT('^(?:-*[^-]){', STR(((233 - ?templateMotifSequenceMatchBeginPositionF9VMT6444) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1455) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067445, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067445) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067445, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1455), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067445, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067445) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067445, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1455), '}'), '')))), '[^-]', ''))) AS ?step2456) .
BIND(((?step2456 + ?targetMotifMatchRegionMatchBeginPositionMF_02067446) - 1) AS ?thisPositionOn126) .
BIND(?thisPositionOn126 AS ?thisPositionOn127) .
BIND(?this AS ?pfs1t457) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn126))) AS ?pfsb123) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn127))) AS ?pfse124) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn126, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a122')) AS ?annotation122) .
BIND(?this AS ?pfs121) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch462 faldo:location ?templateMotifSequenceMatchRegionF9VMT6463 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6465 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067458 .
?templateMotifSequenceMatchRegionF9VMT6463 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6464 .
?templateMotifSequenceMatchBeginF9VMT6464 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6459 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6465 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch466 faldo:location ?targetMotifMatchRegionMatch467 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067469 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067460 .
?targetMotifMatchRegionMatch467 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067468 .
?targetMotifMatchRegionMatchBeginMF_02067468 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067461 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067469 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067458, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067458) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067458, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionF9VMT6459) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1470) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067460, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067460) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067460, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067460) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067460, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1470), '}'), '')))), '[^-]', ''))) AS ?step2471) .
BIND(((?step2471 + ?targetMotifMatchRegionMatchBeginPositionMF_02067461) - 1) AS ?thisPositionOn133) .
BIND(?thisPositionOn133 AS ?thisPositionOn134) .
BIND(?this AS ?pfs1t472) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn133))) AS ?pfsb130) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn134))) AS ?pfse131) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn133, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a129')) AS ?annotation129) .
BIND(?this AS ?pfs128) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch477 faldo:location ?templateMotifSequenceMatchRegionF9VMT6478 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6480 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067473 .
?templateMotifSequenceMatchRegionF9VMT6478 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6479 .
?templateMotifSequenceMatchBeginF9VMT6479 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6474 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6480 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch481 faldo:location ?targetMotifMatchRegionMatch482 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067484 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067475 .
?targetMotifMatchRegionMatch482 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067483 .
?targetMotifMatchRegionMatchBeginMF_02067483 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067476 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067484 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067473, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067473) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067473, CONCAT('^(?:-*[^-]){', STR(((18 - ?templateMotifSequenceMatchBeginPositionF9VMT6474) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1485) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067475, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067475) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067475, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1485), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067475, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067475) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067475, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1485), '}'), '')))), '[^-]', ''))) AS ?step2486) .
BIND(((?step2486 + ?targetMotifMatchRegionMatchBeginPositionMF_02067476) - 1) AS ?thisPositionOn140) .
BIND(?thisPositionOn140 AS ?thisPositionOn141) .
BIND(?this AS ?pfs1t487) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn140))) AS ?pfsb137) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn141))) AS ?pfse138) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn140, 1) = 'H')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a136')) AS ?annotation136) .
BIND(?this AS ?pfs135) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch492 faldo:location ?templateMotifSequenceMatchRegionF9VMT6493 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6495 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067488 .
?templateMotifSequenceMatchRegionF9VMT6493 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6494 .
?templateMotifSequenceMatchBeginF9VMT6494 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6489 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6495 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch496 faldo:location ?targetMotifMatchRegionMatch497 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067499 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067490 .
?targetMotifMatchRegionMatch497 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067498 .
?targetMotifMatchRegionMatchBeginMF_02067498 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067491 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067499 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067488, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067488) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067488, CONCAT('^(?:-*[^-]){', STR(((90 - ?templateMotifSequenceMatchBeginPositionF9VMT6489) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1500) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067490, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067490) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067490, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1500), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067490, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067490) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067490, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1500), '}'), '')))), '[^-]', ''))) AS ?step2501) .
BIND(((?step2501 + ?targetMotifMatchRegionMatchBeginPositionMF_02067491) - 1) AS ?thisPositionOn147) .
BIND(?thisPositionOn147 AS ?thisPositionOn148) .
BIND(?this AS ?pfs1t502) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn147))) AS ?pfsb144) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn148))) AS ?pfse145) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn147, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a143')) AS ?annotation143) .
BIND(?this AS ?pfs142) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch507 faldo:location ?templateMotifSequenceMatchRegionF9VMT6508 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6510 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067503 .
?templateMotifSequenceMatchRegionF9VMT6508 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6509 .
?templateMotifSequenceMatchBeginF9VMT6509 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6504 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6510 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch511 faldo:location ?targetMotifMatchRegionMatch512 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067514 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067505 .
?targetMotifMatchRegionMatch512 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067513 .
?targetMotifMatchRegionMatchBeginMF_02067513 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067506 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067514 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067503, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067503) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067503, CONCAT('^(?:-*[^-]){', STR(((132 - ?templateMotifSequenceMatchBeginPositionF9VMT6504) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1515) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067505, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067505) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067505, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1515), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067505, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067505) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067505, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1515), '}'), '')))), '[^-]', ''))) AS ?step2516) .
BIND(((?step2516 + ?targetMotifMatchRegionMatchBeginPositionMF_02067506) - 1) AS ?thisPositionOn154) .
BIND(?thisPositionOn154 AS ?thisPositionOn155) .
BIND(?this AS ?pfs1t517) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn154))) AS ?pfsb151) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn155))) AS ?pfse152) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn154, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a150')) AS ?annotation150) .
BIND(?this AS ?pfs149) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch522 faldo:location ?templateMotifSequenceMatchRegionF9VMT6523 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6525 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067518 .
?templateMotifSequenceMatchRegionF9VMT6523 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6524 .
?templateMotifSequenceMatchBeginF9VMT6524 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6519 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6525 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch526 faldo:location ?targetMotifMatchRegionMatch527 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067529 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067520 .
?targetMotifMatchRegionMatch527 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067528 .
?targetMotifMatchRegionMatchBeginMF_02067528 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067521 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067529 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067518, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067518) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067518, CONCAT('^(?:-*[^-]){', STR(((132 - ?templateMotifSequenceMatchBeginPositionF9VMT6519) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1530) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067520, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067520) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1530), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067520, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067520) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067520, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1530), '}'), '')))), '[^-]', ''))) AS ?step2531) .
BIND(((?step2531 + ?targetMotifMatchRegionMatchBeginPositionMF_02067521) - 1) AS ?thisPositionOn161) .
BIND(?thisPositionOn161 AS ?thisPositionOn162) .
BIND(?this AS ?pfs1t532) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn161))) AS ?pfsb158) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn162))) AS ?pfse159) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn161, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a157')) AS ?annotation157) .
BIND(?this AS ?pfs156) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch537 faldo:location ?templateMotifSequenceMatchRegionF9VMT6538 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6540 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067533 .
?templateMotifSequenceMatchRegionF9VMT6538 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6539 .
?templateMotifSequenceMatchBeginF9VMT6539 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6534 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6540 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch541 faldo:location ?targetMotifMatchRegionMatch542 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067544 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067535 .
?targetMotifMatchRegionMatch542 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067543 .
?targetMotifMatchRegionMatchBeginMF_02067543 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067536 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067544 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067533, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067533) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067533, CONCAT('^(?:-*[^-]){', STR(((265 - ?templateMotifSequenceMatchBeginPositionF9VMT6534) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1545) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067535, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067535) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067535, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1545), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067535, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067535) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067535, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1545), '}'), '')))), '[^-]', ''))) AS ?step2546) .
BIND(((?step2546 + ?targetMotifMatchRegionMatchBeginPositionMF_02067536) - 1) AS ?thisPositionOn168) .
BIND(?thisPositionOn168 AS ?thisPositionOn169) .
BIND(?this AS ?pfs1t547) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn168))) AS ?pfsb165) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn169))) AS ?pfse166) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn168, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a164')) AS ?annotation164) .
BIND(?this AS ?pfs163) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch552 faldo:location ?templateMotifSequenceMatchRegionF9VMT6553 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6555 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067548 .
?templateMotifSequenceMatchRegionF9VMT6553 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6554 .
?templateMotifSequenceMatchBeginF9VMT6554 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6549 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6555 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch556 faldo:location ?targetMotifMatchRegionMatch557 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067559 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067550 .
?targetMotifMatchRegionMatch557 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067558 .
?targetMotifMatchRegionMatchBeginMF_02067558 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067551 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067559 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067548, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067548) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067548, CONCAT('^(?:-*[^-]){', STR(((265 - ?templateMotifSequenceMatchBeginPositionF9VMT6549) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1560) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067550, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067550) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067550, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1560), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067550, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067550) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067550, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1560), '}'), '')))), '[^-]', ''))) AS ?step2561) .
BIND(((?step2561 + ?targetMotifMatchRegionMatchBeginPositionMF_02067551) - 1) AS ?thisPositionOn175) .
BIND(?thisPositionOn175 AS ?thisPositionOn176) .
BIND(?this AS ?pfs1t562) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn175))) AS ?pfsb172) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn176))) AS ?pfse173) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn175, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a171')) AS ?annotation171) .
BIND(?this AS ?pfs170) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch567 faldo:location ?templateMotifSequenceMatchRegionF9VMT6568 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6570 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067563 .
?templateMotifSequenceMatchRegionF9VMT6568 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6569 .
?templateMotifSequenceMatchBeginF9VMT6569 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6564 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6570 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch571 faldo:location ?targetMotifMatchRegionMatch572 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067574 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067565 .
?targetMotifMatchRegionMatch572 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067573 .
?targetMotifMatchRegionMatchBeginMF_02067573 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067566 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067574 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067563, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067563) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067563, CONCAT('^(?:-*[^-]){', STR(((286 - ?templateMotifSequenceMatchBeginPositionF9VMT6564) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1575) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067565, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067565) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067565, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1575), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067565, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067565) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067565, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1575), '}'), '')))), '[^-]', ''))) AS ?step2576) .
BIND(((?step2576 + ?targetMotifMatchRegionMatchBeginPositionMF_02067566) - 1) AS ?thisPositionOn182) .
BIND(?thisPositionOn182 AS ?thisPositionOn183) .
BIND(?this AS ?pfs1t577) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn182))) AS ?pfsb179) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn183))) AS ?pfse180) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn182, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a178')) AS ?annotation178) .
BIND(?this AS ?pfs177) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch582 faldo:location ?templateMotifSequenceMatchRegionF9VMT6583 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6585 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067578 .
?templateMotifSequenceMatchRegionF9VMT6583 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6584 .
?templateMotifSequenceMatchBeginF9VMT6584 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6579 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6585 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch586 faldo:location ?targetMotifMatchRegionMatch587 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067589 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067580 .
?targetMotifMatchRegionMatch587 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067588 .
?targetMotifMatchRegionMatchBeginMF_02067588 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067581 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067589 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067578, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067578) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067578, CONCAT('^(?:-*[^-]){', STR(((286 - ?templateMotifSequenceMatchBeginPositionF9VMT6579) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1590) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067580, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067580) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067580, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1590), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067580, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067580) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067580, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1590), '}'), '')))), '[^-]', ''))) AS ?step2591) .
BIND(((?step2591 + ?targetMotifMatchRegionMatchBeginPositionMF_02067581) - 1) AS ?thisPositionOn189) .
BIND(?thisPositionOn189 AS ?thisPositionOn190) .
BIND(?this AS ?pfs1t592) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn189))) AS ?pfsb186) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn190))) AS ?pfse187) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn189, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a185')) AS ?annotation185) .
BIND(?this AS ?pfs184) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch597 faldo:location ?templateMotifSequenceMatchRegionF9VMT6598 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationF9VMT6600 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarF9VMT6MF_02067593 .
?templateMotifSequenceMatchRegionF9VMT6598 faldo:begin ?templateMotifSequenceMatchBeginF9VMT6599 .
?templateMotifSequenceMatchBeginF9VMT6599 faldo:position ?templateMotifSequenceMatchBeginPositionF9VMT6594 ;
faldo:reference isoform:F9VMT6-1 .
?templateMotifSequenceProfileAlignmentOperationF9VMT6600 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
?targetMotifMatch601 faldo:location ?targetMotifMatchRegionMatch602 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_02067604 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarF9VMT6MF_02067595 .
?targetMotifMatchRegionMatch602 faldo:begin ?targetMotifMatchRegionMatchBeginMF_02067603 .
?targetMotifMatchRegionMatchBeginMF_02067603 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_02067596 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_02067604 edam:has_input signature:MF_02067 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarF9VMT6MF_02067593, 1, (STRLEN(?templateMotifCigarF9VMT6MF_02067593) - STRLEN(REPLACE(?templateMotifCigarF9VMT6MF_02067593, CONCAT('^(?:-*[^-]){', STR(((347 - ?templateMotifSequenceMatchBeginPositionF9VMT6594) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1605) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067595, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067595) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067595, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1605), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarF9VMT6MF_02067595, 1, (STRLEN(?targetMotifMatchCigarF9VMT6MF_02067595) - STRLEN(REPLACE(?targetMotifMatchCigarF9VMT6MF_02067595, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1605), '}'), '')))), '[^-]', ''))) AS ?step2606) .
BIND(((?step2606 + ?targetMotifMatchRegionMatchBeginPositionMF_02067596) - 1) AS ?thisPositionOn196) .
BIND(?thisPositionOn196 AS ?thisPositionOn197) .
BIND(?this AS ?pfs1t607) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn196))) AS ?pfsb193) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn197))) AS ?pfse194) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn196, 1) = 'Y')) .
BIND(URI(CONCAT(STR(?this), '#MF_02067a192')) AS ?annotation192) .
BIND(?this AS ?pfs191) .
}
}
"xsd:string |
