| http://purl.uniprot.org/unirules/MF_00916#construct | http://www.w3.org/ns/shacl#construct | "CONSTRUCT {
_:319258 up:source unirule:MF_00916 .
_:319259 up:source unirule:MF_00916 .
_:319260 up:source unirule:MF_00916 .
_:319261 up:source unirule:MF_00916 .
_:319262 up:source unirule:MF_00916 .
_:319263 up:source unirule:MF_00916 .
_:319264 up:source unirule:MF_00916 .
_:319265 up:source unirule:MF_00916 .
_:319266 up:source unirule:MF_00916 .
_:319267 up:source unirule:MF_00916 .
_:319268 up:source unirule:MF_00916 .
_:319269 up:source unirule:MF_00916 .
_:319270 up:source unirule:MF_00916 .
_:319271 up:source unirule:MF_00916 .
_:319272 up:source unirule:MF_00916 .
_:319273 up:source unirule:MF_00916 .
_:319274 up:source unirule:MF_00916 .
_:319275 up:source unirule:MF_00916 .
_:319276 up:source unirule:MF_00916 .
_:319277 up:source unirule:MF_00916 .
_:319278 up:source unirule:MF_00916 .
_:319279 up:source unirule:MF_00916 .
_:319280 up:source unirule:MF_00916 .
_:319281 up:source unirule:MF_00916 .
_:319282 up:source unirule:MF_00916 .
_:319283 up:source unirule:MF_00916 .
_:319284 up:source unirule:MF_00916 .
_:319285 up:source unirule:MF_00916 .
_:319286 up:source unirule:MF_00916 .
_:319287 up:source unirule:MF_00916 .
_:319288 up:source unirule:MF_00916 .
_:319289 up:source unirule:MF_00916 .
_:319290 up:source unirule:MF_00916 .
_:319291 up:source unirule:MF_00916 .
_:319292 up:source unirule:MF_00916 .
_:319293 up:source unirule:MF_00916 .
_:319294 up:source unirule:MF_00916 .
_:319295 up:source unirule:MF_00916 .
_:319296 up:source unirule:MF_00916 .
_:319297 up:source unirule:MF_00916 .
_:319298 up:source unirule:MF_00916 .
_:319299 up:source unirule:MF_00916 .
_:319300 up:source unirule:MF_00916 .
_:319301 up:source unirule:MF_00916 .
_:319302 up:source unirule:MF_00916 .
_:319303 up:source unirule:MF_00916 .
_:319304 up:source unirule:MF_00916 .
_:319305 up:source unirule:MF_00916 .
_:319306 up:source unirule:MF_00916 .
_:319307 up:source unirule:MF_00916 .
_:319308 up:source unirule:MF_00916 .
?this up:alternativeName ?name1 ;
up:annotation ?annotation3 ,
?annotation4 ,
?annotation6 ,
?annotation7 ,
?annotation8 ,
?annotation9 ,
?annotation10 ,
?annotation12 ;
up:classifiedWith GO:0005737 ,
GO:0006400 ,
GO:0008616 ,
GO:0051536 ,
GO:0052693 ,
keyword:408 ,
keyword:411 ,
keyword:479 ,
keyword:4 ,
keyword:560 ,
keyword:671 ,
keyword:819 ,
keyword:846 ,
keyword:963 ;
up:recommendedName ?name0 .
?name0 up:ecName '1.17.99.6' ;
up:fullName 'Epoxyqueuosine reductase' ;
rdf:type up:Structured_Name .
?name1 up:fullName 'Queuosine biosynthesis protein QueG' ;
rdf:type up:Structured_Name .
?gene2 skos:prefLabel 'queG' .
?annotation3 a up:Function_Annotation ;
rdfs:comment 'Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).' .
?annotation4 up:activity ?activity5 ;
rdf:type up:Catalytic_Activity_Annotation .
?activity5 up:catalyticActivity ;
up:enzymeClass .
?annotation6 up:cofactor chebi:16304 ;
rdf:type up:Cofactor_Annotation .
?annotation7 up:cofactor chebi:49883 ;
rdf:type up:Cofactor_Annotation ;
rdfs:comment 'Binds 2 [4Fe-4S] clusters per monomer.' .
?annotation8 a up:Pathway_Annotation ;
rdfs:comment 'tRNA modification; tRNA-queuosine biosynthesis.' .
?annotation9 a up:Subunit_Annotation ;
rdfs:comment 'Monomer.' .
?annotation10 a up:Subcellular_Location_Annotation .
?annotation10li11 up:cellularComponent .
?annotation12 a up:Similarity_Annotation ;
rdfs:comment 'Belongs to the QueG family.' .
?pfs13 up:annotation ?annotation14 .
?annotation14 faldo:begin ?pfsb15 ;
faldo:end ?pfse16 ;
up:ligand ?ligand17 ;
rdf:type up:Binding_Site_Annotation .
?pfsb15 faldo:position ?thisPositionOn18 ;
rdf:type faldo:ExactPosition .
?pfse16 faldo:position ?thisPositionOn19 ;
rdf:type faldo:ExactPosition .
?ligand17 rdfs:subClassOf chebi:16304 .
?pfs20 up:annotation ?annotation21 .
?annotation21 faldo:begin ?pfsb22 ;
faldo:end ?pfse23 ;
up:ligand ?ligand24 ;
rdf:type up:Binding_Site_Annotation .
?pfsb22 faldo:position ?thisPositionOn25 ;
rdf:type faldo:ExactPosition .
?pfse23 faldo:position ?thisPositionOn26 ;
rdf:type faldo:ExactPosition .
?ligand24 rdfs:subClassOf chebi:16304 .
?pfs27 up:annotation ?annotation28 .
?annotation28 faldo:begin ?pfsb29 ;
faldo:end ?pfse30 ;
rdf:type up:Active_Site_Annotation ;
rdfs:comment 'Proton donor' .
?pfsb29 faldo:position ?thisPositionOn31 ;
rdf:type faldo:ExactPosition .
?pfse30 faldo:position ?thisPositionOn32 ;
rdf:type faldo:ExactPosition .
?pfs33 up:annotation ?annotation34 .
?annotation34 faldo:begin ?pfsb35 ;
faldo:end ?pfse36 ;
up:ligand ?ligand37 ;
rdf:type up:Binding_Site_Annotation .
?pfsb35 faldo:position ?thisPositionOn38 ;
rdf:type faldo:ExactPosition .
?pfse36 faldo:position ?thisPositionOn39 ;
rdf:type faldo:ExactPosition .
?ligand37 rdfs:subClassOf chebi:49883 .
?pfs40 up:annotation ?annotation41 .
?annotation41 faldo:begin ?pfsb42 ;
faldo:end ?pfse43 ;
up:ligand ?ligand44 ;
rdf:type up:Binding_Site_Annotation .
?pfsb42 faldo:position ?thisPositionOn45 ;
rdf:type faldo:ExactPosition .
?pfse43 faldo:position ?thisPositionOn46 ;
rdf:type faldo:ExactPosition .
?ligand44 rdfs:subClassOf chebi:49883 .
?pfs47 up:annotation ?annotation48 .
?annotation48 faldo:begin ?pfsb49 ;
faldo:end ?pfse50 ;
up:ligand ?ligand51 ;
rdf:type up:Binding_Site_Annotation .
?pfsb49 faldo:position ?thisPositionOn52 ;
rdf:type faldo:ExactPosition .
?pfse50 faldo:position ?thisPositionOn53 ;
rdf:type faldo:ExactPosition .
?ligand51 rdfs:subClassOf chebi:49883 .
?pfs54 up:annotation ?annotation55 .
?annotation55 faldo:begin ?pfsb56 ;
faldo:end ?pfse57 ;
up:ligand ?ligand58 ;
rdf:type up:Binding_Site_Annotation .
?pfsb56 faldo:position ?thisPositionOn59 ;
rdf:type faldo:ExactPosition .
?pfse57 faldo:position ?thisPositionOn60 ;
rdf:type faldo:ExactPosition .
?ligand58 rdfs:subClassOf chebi:49883 .
?pfs61 up:annotation ?annotation62 .
?annotation62 faldo:begin ?pfsb63 ;
faldo:end ?pfse64 ;
up:ligand ?ligand65 ;
rdf:type up:Binding_Site_Annotation .
?pfsb63 faldo:position ?thisPositionOn66 ;
rdf:type faldo:ExactPosition .
?pfse64 faldo:position ?thisPositionOn67 ;
rdf:type faldo:ExactPosition .
?ligand65 rdfs:subClassOf chebi:49883 .
?pfs68 up:annotation ?annotation69 .
?annotation69 faldo:begin ?pfsb70 ;
faldo:end ?pfse71 ;
up:ligand ?ligand72 ;
rdf:type up:Binding_Site_Annotation .
?pfsb70 faldo:position ?thisPositionOn73 ;
rdf:type faldo:ExactPosition .
?pfse71 faldo:position ?thisPositionOn74 ;
rdf:type faldo:ExactPosition .
?ligand72 rdfs:subClassOf chebi:49883 .
?pfs75 up:annotation ?annotation76 .
?annotation76 faldo:begin ?pfsb77 ;
faldo:end ?pfse78 ;
up:ligand ?ligand79 ;
rdf:type up:Binding_Site_Annotation .
?pfsb77 faldo:position ?thisPositionOn80 ;
rdf:type faldo:ExactPosition .
?pfse78 faldo:position ?thisPositionOn81 ;
rdf:type faldo:ExactPosition .
?ligand79 rdfs:subClassOf chebi:49883 .
?pfs82 up:annotation ?annotation83 .
?annotation83 faldo:begin ?pfsb84 ;
faldo:end ?pfse85 ;
up:ligand ?ligand86 ;
rdf:type up:Binding_Site_Annotation .
?pfsb84 faldo:position ?thisPositionOn87 ;
rdf:type faldo:ExactPosition .
?pfse85 faldo:position ?thisPositionOn88 ;
rdf:type faldo:ExactPosition .
?ligand86 rdfs:subClassOf chebi:49883 .
?pfs89 up:annotation ?annotation90 .
?annotation90 faldo:begin ?pfsb91 ;
faldo:end ?pfse92 ;
up:ligand ?ligand93 ;
rdf:type up:Binding_Site_Annotation .
?pfsb91 faldo:position ?thisPositionOn94 ;
rdf:type faldo:ExactPosition .
?pfse92 faldo:position ?thisPositionOn95 ;
rdf:type faldo:ExactPosition .
?ligand93 rdfs:subClassOf chebi:16304 .
?pfs96 up:annotation ?annotation97 .
?annotation97 faldo:begin ?pfsb98 ;
faldo:end ?pfse99 ;
up:ligand ?ligand100 ;
rdf:type up:Binding_Site_Annotation .
?pfsb98 faldo:position ?thisPositionOn101 ;
rdf:type faldo:ExactPosition .
?pfse99 faldo:position ?thisPositionOn102 ;
rdf:type faldo:ExactPosition .
?ligand100 rdfs:subClassOf chebi:16304 .
?pfs103 up:annotation ?annotation104 .
?annotation104 faldo:begin ?pfsb105 ;
faldo:end ?pfse106 ;
up:ligand ?ligand107 ;
rdf:type up:Binding_Site_Annotation .
?pfsb105 faldo:position ?thisPositionOn108 ;
rdf:type faldo:ExactPosition .
?pfse106 faldo:position ?thisPositionOn109 ;
rdf:type faldo:ExactPosition .
?ligand107 rdfs:subClassOf chebi:16304 .
?pfs110 up:annotation ?annotation111 .
?annotation111 faldo:begin ?pfsb112 ;
faldo:end ?pfse113 ;
up:ligand ?ligand114 ;
rdf:type up:Binding_Site_Annotation .
?pfsb112 faldo:position ?thisPositionOn115 ;
rdf:type faldo:ExactPosition .
?pfse113 faldo:position ?thisPositionOn116 ;
rdf:type faldo:ExactPosition .
?ligand114 rdfs:subClassOf chebi:16304 .
?pfs117 up:annotation ?annotation118 .
?annotation118 faldo:begin ?pfsb119 ;
faldo:end ?pfse120 ;
up:ligand ?ligand121 ;
rdf:type up:Binding_Site_Annotation .
?pfsb119 faldo:position ?thisPositionOn122 ;
rdf:type faldo:ExactPosition .
?pfse120 faldo:position ?thisPositionOn123 ;
rdf:type faldo:ExactPosition .
?ligand121 rdfs:subClassOf chebi:16304 .
?pfs124 up:annotation ?annotation125 .
?annotation125 faldo:begin ?pfsb126 ;
faldo:end ?pfse127 ;
up:ligand ?ligand128 ;
rdf:type up:Binding_Site_Annotation .
?pfsb126 faldo:position ?thisPositionOn129 ;
rdf:type faldo:ExactPosition .
?pfse127 faldo:position ?thisPositionOn130 ;
rdf:type faldo:ExactPosition .
?ligand128 rdfs:subClassOf chebi:16304 .
?pfs131 up:annotation ?annotation132 .
?annotation132 faldo:begin ?pfsb133 ;
faldo:end ?pfse134 ;
up:ligand ?ligand135 ;
rdf:type up:Binding_Site_Annotation .
?pfsb133 faldo:position ?thisPositionOn136 ;
rdf:type faldo:ExactPosition .
?pfse134 faldo:position ?thisPositionOn137 ;
rdf:type faldo:ExactPosition .
?ligand135 rdfs:subClassOf chebi:16304 .
?pfs138 up:annotation ?annotation139 .
?annotation139 faldo:begin ?pfsb140 ;
faldo:end ?pfse141 ;
up:ligand ?ligand142 ;
rdf:type up:Binding_Site_Annotation .
?pfsb140 faldo:position ?thisPositionOn143 ;
rdf:type faldo:ExactPosition .
?pfse141 faldo:position ?thisPositionOn144 ;
rdf:type faldo:ExactPosition .
?ligand142 rdfs:subClassOf chebi:16304 .
?pfs145 up:annotation ?annotation146 .
?annotation146 faldo:begin ?pfsb147 ;
faldo:end ?pfse148 ;
up:ligand ?ligand149 ;
rdf:type up:Binding_Site_Annotation .
?pfsb147 faldo:position ?thisPositionOn151 ;
rdf:type faldo:ExactPosition .
?pfse148 faldo:position ?thisPositionOn152 ;
rdf:type faldo:ExactPosition .
?ligand149 up:ligandPart ?ligand149 ;
rdfs:subClassOf chebi:17843 ,
?molecule150 .
?molecule150 rdfs:label 'tRNA anticodon stem loop' .
?pfs153 up:annotation ?annotation154 .
?annotation154 faldo:begin ?pfsb155 ;
faldo:end ?pfse156 ;
up:ligand ?ligand157 ;
rdf:type up:Binding_Site_Annotation .
?pfsb155 faldo:position ?thisPositionOn159 ;
rdf:type faldo:ExactPosition .
?pfse156 faldo:position ?thisPositionOn160 ;
rdf:type faldo:ExactPosition .
?ligand157 up:ligandPart ?ligand157 ;
rdfs:subClassOf chebi:17843 ,
?molecule158 .
?molecule158 rdfs:label 'tRNA anticodon stem loop' .
?pfs161 up:annotation ?annotation162 .
?annotation162 faldo:begin ?pfsb163 ;
faldo:end ?pfse164 ;
up:ligand ?ligand165 ;
rdf:type up:Binding_Site_Annotation .
?pfsb163 faldo:position ?thisPositionOn167 ;
rdf:type faldo:ExactPosition .
?pfse164 faldo:position ?thisPositionOn168 ;
rdf:type faldo:ExactPosition .
?ligand165 up:ligandPart ?ligand165 ;
rdfs:subClassOf chebi:17843 ,
?molecule166 .
?molecule166 rdfs:label 'tRNA anticodon stem loop' .
?pfs169 up:annotation ?annotation170 .
?annotation170 faldo:begin ?pfsb171 ;
faldo:end ?pfse172 ;
up:ligand ?ligand173 ;
rdf:type up:Binding_Site_Annotation .
?pfsb171 faldo:position ?thisPositionOn175 ;
rdf:type faldo:ExactPosition .
?pfse172 faldo:position ?thisPositionOn176 ;
rdf:type faldo:ExactPosition .
?ligand173 up:ligandPart ?ligand173 ;
rdfs:subClassOf chebi:17843 ,
?molecule174 .
?molecule174 rdfs:label 'tRNA anticodon stem loop' .
?pfs177 up:annotation ?annotation178 .
?annotation178 faldo:begin ?pfsb179 ;
faldo:end ?pfse180 ;
up:ligand ?ligand181 ;
rdf:type up:Binding_Site_Annotation .
?pfsb179 faldo:position ?thisPositionOn183 ;
rdf:type faldo:ExactPosition .
?pfse180 faldo:position ?thisPositionOn184 ;
rdf:type faldo:ExactPosition .
?ligand181 up:ligandPart ?ligand181 ;
rdfs:subClassOf chebi:17843 ,
?molecule182 .
?molecule182 rdfs:label 'tRNA anticodon stem loop' .
?pfs185 up:annotation ?annotation186 .
?annotation186 faldo:begin ?pfsb187 ;
faldo:end ?pfse188 ;
up:ligand ?ligand189 ;
rdf:type up:Binding_Site_Annotation .
?pfsb187 faldo:position ?thisPositionOn191 ;
rdf:type faldo:ExactPosition .
?pfse188 faldo:position ?thisPositionOn192 ;
rdf:type faldo:ExactPosition .
?ligand189 up:ligandPart ?ligand189 ;
rdfs:subClassOf chebi:17843 ,
?molecule190 .
?molecule190 rdfs:label 'tRNA anticodon stem loop' .
?pfs193 up:annotation ?annotation194 .
?annotation194 faldo:begin ?pfsb195 ;
faldo:end ?pfse196 ;
up:ligand ?ligand197 ;
rdf:type up:Binding_Site_Annotation .
?pfsb195 faldo:position ?thisPositionOn199 ;
rdf:type faldo:ExactPosition .
?pfse196 faldo:position ?thisPositionOn200 ;
rdf:type faldo:ExactPosition .
?ligand197 up:ligandPart ?ligand197 ;
rdfs:subClassOf chebi:17843 ,
?molecule198 .
?molecule198 rdfs:label 'tRNA anticodon stem loop' .
_:319309 a rdf:Statement ;
up:attribution _:319258 ;
rdf:subject ?this ;
rdf:predicate up:recommendedName ;
rdf:object ?name0 .
_:319310 a rdf:Statement ;
up:attribution _:319259 ;
rdf:subject ?this ;
rdf:predicate up:alternativeName ;
rdf:object ?name1 .
_:319311 a rdf:Statement ;
up:attribution _:319260 ;
rdf:subject ?gene2 ;
rdf:predicate up:encodedBy ;
rdf:object ?gene2 .
_:319312 a rdf:Statement ;
up:attribution _:319261 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation3 .
_:319313 a rdf:Statement ;
up:attribution _:319262 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation4 .
_:319314 a rdf:Statement ;
up:attribution _:319263 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation6 .
_:319315 a rdf:Statement ;
up:attribution _:319264 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation7 .
_:319316 a rdf:Statement ;
up:attribution _:319265 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation8 .
_:319317 a rdf:Statement ;
up:attribution _:319266 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation9 .
_:319318 a rdf:Statement ;
up:attribution _:319267 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation10 .
_:319319 a rdf:Statement ;
up:attribution _:319268 ;
rdf:subject ?this ;
rdf:predicate up:annotation ;
rdf:object ?annotation12 .
_:319320 a rdf:Statement ;
up:attribution _:319269 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:4 .
_:319321 a rdf:Statement ;
up:attribution _:319270 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:846 .
_:319322 a rdf:Statement ;
up:attribution _:319271 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:963 .
_:319323 a rdf:Statement ;
up:attribution _:319272 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:408 .
_:319324 a rdf:Statement ;
up:attribution _:319273 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:411 .
_:319325 a rdf:Statement ;
up:attribution _:319274 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:479 .
_:319326 a rdf:Statement ;
up:attribution _:319275 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:560 .
_:319327 a rdf:Statement ;
up:attribution _:319276 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:671 .
_:319328 a rdf:Statement ;
up:attribution _:319277 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object keyword:819 .
_:319329 a rdf:Statement ;
up:attribution _:319278 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0052693 .
_:319330 a rdf:Statement ;
up:attribution _:319279 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0051536 .
_:319331 a rdf:Statement ;
up:attribution _:319280 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0008616 .
_:319332 a rdf:Statement ;
up:attribution _:319281 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0006400 .
_:319333 a rdf:Statement ;
up:attribution _:319282 ;
rdf:subject ?this ;
rdf:predicate up:classifiedWith ;
rdf:object GO:0005737 .
_:319334 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:319335 a rdf:Statement ;
up:attribution _:319283 ;
rdf:subject ?pfs13 ;
rdf:predicate up:annotation ;
rdf:object ?annotation14 .
_:319336 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:319337 a rdf:Statement ;
up:attribution _:319284 ;
rdf:subject ?pfs20 ;
rdf:predicate up:annotation ;
rdf:object ?annotation21 .
_:319338 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:319339 a rdf:Statement ;
up:attribution _:319285 ;
rdf:subject ?pfs27 ;
rdf:predicate up:annotation ;
rdf:object ?annotation28 .
_:319340 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs33 ;
rdf:predicate up:annotation ;
rdf:object ?annotation34 .
_:319341 a rdf:Statement ;
up:attribution _:319286 ;
rdf:subject ?pfs33 ;
rdf:predicate up:annotation ;
rdf:object ?annotation34 .
_:319342 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:319343 a rdf:Statement ;
up:attribution _:319287 ;
rdf:subject ?pfs40 ;
rdf:predicate up:annotation ;
rdf:object ?annotation41 .
_:319344 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs47 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:319345 a rdf:Statement ;
up:attribution _:319288 ;
rdf:subject ?pfs47 ;
rdf:predicate up:annotation ;
rdf:object ?annotation48 .
_:319346 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:319347 a rdf:Statement ;
up:attribution _:319289 ;
rdf:subject ?pfs54 ;
rdf:predicate up:annotation ;
rdf:object ?annotation55 .
_:319348 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs61 ;
rdf:predicate up:annotation ;
rdf:object ?annotation62 .
_:319349 a rdf:Statement ;
up:attribution _:319290 ;
rdf:subject ?pfs61 ;
rdf:predicate up:annotation ;
rdf:object ?annotation62 .
_:319350 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs68 ;
rdf:predicate up:annotation ;
rdf:object ?annotation69 .
_:319351 a rdf:Statement ;
up:attribution _:319291 ;
rdf:subject ?pfs68 ;
rdf:predicate up:annotation ;
rdf:object ?annotation69 .
_:319352 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs75 ;
rdf:predicate up:annotation ;
rdf:object ?annotation76 .
_:319353 a rdf:Statement ;
up:attribution _:319292 ;
rdf:subject ?pfs75 ;
rdf:predicate up:annotation ;
rdf:object ?annotation76 .
_:319354 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs82 ;
rdf:predicate up:annotation ;
rdf:object ?annotation83 .
_:319355 a rdf:Statement ;
up:attribution _:319293 ;
rdf:subject ?pfs82 ;
rdf:predicate up:annotation ;
rdf:object ?annotation83 .
_:319356 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs89 ;
rdf:predicate up:annotation ;
rdf:object ?annotation90 .
_:319357 a rdf:Statement ;
up:attribution _:319294 ;
rdf:subject ?pfs89 ;
rdf:predicate up:annotation ;
rdf:object ?annotation90 .
_:319358 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs96 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:319359 a rdf:Statement ;
up:attribution _:319295 ;
rdf:subject ?pfs96 ;
rdf:predicate up:annotation ;
rdf:object ?annotation97 .
_:319360 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs103 ;
rdf:predicate up:annotation ;
rdf:object ?annotation104 .
_:319361 a rdf:Statement ;
up:attribution _:319296 ;
rdf:subject ?pfs103 ;
rdf:predicate up:annotation ;
rdf:object ?annotation104 .
_:319362 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs110 ;
rdf:predicate up:annotation ;
rdf:object ?annotation111 .
_:319363 a rdf:Statement ;
up:attribution _:319297 ;
rdf:subject ?pfs110 ;
rdf:predicate up:annotation ;
rdf:object ?annotation111 .
_:319364 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs117 ;
rdf:predicate up:annotation ;
rdf:object ?annotation118 .
_:319365 a rdf:Statement ;
up:attribution _:319298 ;
rdf:subject ?pfs117 ;
rdf:predicate up:annotation ;
rdf:object ?annotation118 .
_:319366 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs124 ;
rdf:predicate up:annotation ;
rdf:object ?annotation125 .
_:319367 a rdf:Statement ;
up:attribution _:319299 ;
rdf:subject ?pfs124 ;
rdf:predicate up:annotation ;
rdf:object ?annotation125 .
_:319368 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs131 ;
rdf:predicate up:annotation ;
rdf:object ?annotation132 .
_:319369 a rdf:Statement ;
up:attribution _:319300 ;
rdf:subject ?pfs131 ;
rdf:predicate up:annotation ;
rdf:object ?annotation132 .
_:319370 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs138 ;
rdf:predicate up:annotation ;
rdf:object ?annotation139 .
_:319371 a rdf:Statement ;
up:attribution _:319301 ;
rdf:subject ?pfs138 ;
rdf:predicate up:annotation ;
rdf:object ?annotation139 .
_:319372 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs145 ;
rdf:predicate up:annotation ;
rdf:object ?annotation146 .
_:319373 a rdf:Statement ;
up:attribution _:319302 ;
rdf:subject ?pfs145 ;
rdf:predicate up:annotation ;
rdf:object ?annotation146 .
_:319374 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs153 ;
rdf:predicate up:annotation ;
rdf:object ?annotation154 .
_:319375 a rdf:Statement ;
up:attribution _:319303 ;
rdf:subject ?pfs153 ;
rdf:predicate up:annotation ;
rdf:object ?annotation154 .
_:319376 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs161 ;
rdf:predicate up:annotation ;
rdf:object ?annotation162 .
_:319377 a rdf:Statement ;
up:attribution _:319304 ;
rdf:subject ?pfs161 ;
rdf:predicate up:annotation ;
rdf:object ?annotation162 .
_:319378 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs169 ;
rdf:predicate up:annotation ;
rdf:object ?annotation170 .
_:319379 a rdf:Statement ;
up:attribution _:319305 ;
rdf:subject ?pfs169 ;
rdf:predicate up:annotation ;
rdf:object ?annotation170 .
_:319380 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs177 ;
rdf:predicate up:annotation ;
rdf:object ?annotation178 .
_:319381 a rdf:Statement ;
up:attribution _:319306 ;
rdf:subject ?pfs177 ;
rdf:predicate up:annotation ;
rdf:object ?annotation178 .
_:319382 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs185 ;
rdf:predicate up:annotation ;
rdf:object ?annotation186 .
_:319383 a rdf:Statement ;
up:attribution _:319307 ;
rdf:subject ?pfs185 ;
rdf:predicate up:annotation ;
rdf:object ?annotation186 .
_:319384 a rdf:Statement ;
up:source unirule:MF_00916 ;
rdf:subject ?pfs193 ;
rdf:predicate up:annotation ;
rdf:object ?annotation194 .
_:319385 a rdf:Statement ;
up:attribution _:319308 ;
rdf:subject ?pfs193 ;
rdf:predicate up:annotation ;
rdf:object ?annotation194 .
}
WHERE {
#baseURI: http://purl.uniprot.org/unirule/MF_00916
#Rule MF_00916 Created by:? on:2012-02-06 Modified by:Catherine Rivoire on:2025-06-12
?this up:organism ?thisOrganism ;
rdfs:seeAlso signature:MF_00916 .
?thisOrganism rdfs:subClassOf+ taxon:2 .
BIND(URI(CONCAT(STR(?this), '#MF_00916a0')) AS ?name0) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a1')) AS ?name1) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a3')) AS ?annotation3) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a4')) AS ?annotation4) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a6')) AS ?annotation6) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a7')) AS ?annotation7) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a8')) AS ?annotation8) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a9')) AS ?annotation9) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a10')) AS ?annotation10) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a12')) AS ?annotation12) .
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch205 faldo:location ?templateMotifSequenceMatchRegionP97030206 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030208 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916201 .
?templateMotifSequenceMatchRegionP97030206 faldo:begin ?templateMotifSequenceMatchBeginP97030207 .
?templateMotifSequenceMatchBeginP97030207 faldo:position ?templateMotifSequenceMatchBeginPositionP97030202 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030208 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch209 faldo:location ?targetMotifMatchRegionMatch210 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916212 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916203 .
?targetMotifMatchRegionMatch210 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916211 .
?targetMotifMatchRegionMatchBeginMF_00916211 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916204 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916212 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916201, 1, (STRLEN(?templateMotifCigarP97030MF_00916201) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916201, CONCAT('^(?:-*[^-]){', STR(((139 - ?templateMotifSequenceMatchBeginPositionP97030202) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1213) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916203, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916203) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916203, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916203) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1213), '}'), '')))), '[^-]', ''))) AS ?step2214) .
BIND(((?step2214 + ?targetMotifMatchRegionMatchBeginPositionMF_00916204) - 1) AS ?thisPositionOn18) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916201, 1, (STRLEN(?templateMotifCigarP97030MF_00916201) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916201, CONCAT('^(?:-*[^-]){', STR(((141 - ?templateMotifSequenceMatchBeginPositionP97030202) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1215) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916203, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916203) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916203, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916203) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916203, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1215), '}'), '')))), '[^-]', ''))) AS ?step2216) .
BIND(((?step2216 + ?targetMotifMatchRegionMatchBeginPositionMF_00916204) - 1) AS ?thisPositionOn19) .
BIND(?this AS ?pfs1t217) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn18))) AS ?pfsb15) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn19))) AS ?pfse16) .
FILTER (REGEX('S[DE][RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn18, (?thisPositionOn19 - ?thisPositionOn18)))) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a14')) AS ?annotation14) .
BIND(?this AS ?pfs13) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch222 faldo:location ?templateMotifSequenceMatchRegionP97030223 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030225 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916218 .
?templateMotifSequenceMatchRegionP97030223 faldo:begin ?templateMotifSequenceMatchBeginP97030224 .
?templateMotifSequenceMatchBeginP97030224 faldo:position ?templateMotifSequenceMatchBeginPositionP97030219 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030225 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch226 faldo:location ?targetMotifMatchRegionMatch227 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916229 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916220 .
?targetMotifMatchRegionMatch227 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916228 .
?targetMotifMatchRegionMatchBeginMF_00916228 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916221 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916229 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916218, 1, (STRLEN(?templateMotifCigarP97030MF_00916218) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916218, CONCAT('^(?:-*[^-]){', STR(((240 - ?templateMotifSequenceMatchBeginPositionP97030219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1230) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916220, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916220) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916220, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916220) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1230), '}'), '')))), '[^-]', ''))) AS ?step2231) .
BIND(((?step2231 + ?targetMotifMatchRegionMatchBeginPositionMF_00916221) - 1) AS ?thisPositionOn25) .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916218, 1, (STRLEN(?templateMotifCigarP97030MF_00916218) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916218, CONCAT('^(?:-*[^-]){', STR(((241 - ?templateMotifSequenceMatchBeginPositionP97030219) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1232) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916220, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916220) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916220, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916220) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916220, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1232), '}'), '')))), '[^-]', ''))) AS ?step2233) .
BIND(((?step2233 + ?targetMotifMatchRegionMatchBeginPositionMF_00916221) - 1) AS ?thisPositionOn26) .
BIND(?this AS ?pfs1t234) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn25))) AS ?pfsb22) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn26))) AS ?pfse23) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn25, (?thisPositionOn26 - ?thisPositionOn25)) = 'CD')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a21')) AS ?annotation21) .
BIND(?this AS ?pfs20) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch239 faldo:location ?templateMotifSequenceMatchRegionP97030240 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030242 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916235 .
?templateMotifSequenceMatchRegionP97030240 faldo:begin ?templateMotifSequenceMatchBeginP97030241 .
?templateMotifSequenceMatchBeginP97030241 faldo:position ?templateMotifSequenceMatchBeginPositionP97030236 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030242 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch243 faldo:location ?targetMotifMatchRegionMatch244 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916246 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916237 .
?targetMotifMatchRegionMatch244 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916245 .
?targetMotifMatchRegionMatchBeginMF_00916245 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916238 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916246 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916235, 1, (STRLEN(?templateMotifCigarP97030MF_00916235) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916235, CONCAT('^(?:-*[^-]){', STR(((134 - ?templateMotifSequenceMatchBeginPositionP97030236) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1247) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916237, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916237) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916237, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916237) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916237, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1247), '}'), '')))), '[^-]', ''))) AS ?step2248) .
BIND(((?step2248 + ?targetMotifMatchRegionMatchBeginPositionMF_00916238) - 1) AS ?thisPositionOn31) .
BIND(?thisPositionOn31 AS ?thisPositionOn32) .
BIND(?this AS ?pfs1t249) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn31))) AS ?pfsb29) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn32))) AS ?pfse30) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn31, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a28')) AS ?annotation28) .
BIND(?this AS ?pfs27) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch254 faldo:location ?templateMotifSequenceMatchRegionP97030255 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030257 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916250 .
?templateMotifSequenceMatchRegionP97030255 faldo:begin ?templateMotifSequenceMatchBeginP97030256 .
?templateMotifSequenceMatchBeginP97030256 faldo:position ?templateMotifSequenceMatchBeginPositionP97030251 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030257 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch258 faldo:location ?targetMotifMatchRegionMatch259 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916261 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916252 .
?targetMotifMatchRegionMatch259 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916260 .
?targetMotifMatchRegionMatchBeginMF_00916260 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916253 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916261 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916250, 1, (STRLEN(?templateMotifCigarP97030MF_00916250) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916250, CONCAT('^(?:-*[^-]){', STR(((188 - ?templateMotifSequenceMatchBeginPositionP97030251) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1262) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916252, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916252) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916252, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916252) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916252, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1262), '}'), '')))), '[^-]', ''))) AS ?step2263) .
BIND(((?step2263 + ?targetMotifMatchRegionMatchBeginPositionMF_00916253) - 1) AS ?thisPositionOn38) .
BIND(?thisPositionOn38 AS ?thisPositionOn39) .
BIND(?this AS ?pfs1t264) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn38))) AS ?pfsb35) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn39))) AS ?pfse36) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn38, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a34')) AS ?annotation34) .
BIND(?this AS ?pfs33) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch269 faldo:location ?templateMotifSequenceMatchRegionP97030270 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030272 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916265 .
?templateMotifSequenceMatchRegionP97030270 faldo:begin ?templateMotifSequenceMatchBeginP97030271 .
?templateMotifSequenceMatchBeginP97030271 faldo:position ?templateMotifSequenceMatchBeginPositionP97030266 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030272 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch273 faldo:location ?targetMotifMatchRegionMatch274 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916276 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916267 .
?targetMotifMatchRegionMatch274 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916275 .
?targetMotifMatchRegionMatchBeginMF_00916275 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916268 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916276 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916265, 1, (STRLEN(?templateMotifCigarP97030MF_00916265) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916265, CONCAT('^(?:-*[^-]){', STR(((191 - ?templateMotifSequenceMatchBeginPositionP97030266) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1277) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916267, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916267) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916267, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916267) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916267, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1277), '}'), '')))), '[^-]', ''))) AS ?step2278) .
BIND(((?step2278 + ?targetMotifMatchRegionMatchBeginPositionMF_00916268) - 1) AS ?thisPositionOn45) .
BIND(?thisPositionOn45 AS ?thisPositionOn46) .
BIND(?this AS ?pfs1t279) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn45))) AS ?pfsb42) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn46))) AS ?pfse43) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn45, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a41')) AS ?annotation41) .
BIND(?this AS ?pfs40) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch284 faldo:location ?templateMotifSequenceMatchRegionP97030285 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030287 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916280 .
?templateMotifSequenceMatchRegionP97030285 faldo:begin ?templateMotifSequenceMatchBeginP97030286 .
?templateMotifSequenceMatchBeginP97030286 faldo:position ?templateMotifSequenceMatchBeginPositionP97030281 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030287 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch288 faldo:location ?targetMotifMatchRegionMatch289 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916291 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916282 .
?targetMotifMatchRegionMatch289 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916290 .
?targetMotifMatchRegionMatchBeginMF_00916290 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916283 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916291 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916280, 1, (STRLEN(?templateMotifCigarP97030MF_00916280) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916280, CONCAT('^(?:-*[^-]){', STR(((194 - ?templateMotifSequenceMatchBeginPositionP97030281) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1292) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916282, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916282) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916282, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916282) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916282, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1292), '}'), '')))), '[^-]', ''))) AS ?step2293) .
BIND(((?step2293 + ?targetMotifMatchRegionMatchBeginPositionMF_00916283) - 1) AS ?thisPositionOn52) .
BIND(?thisPositionOn52 AS ?thisPositionOn53) .
BIND(?this AS ?pfs1t294) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn52))) AS ?pfsb49) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn53))) AS ?pfse50) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn52, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a48')) AS ?annotation48) .
BIND(?this AS ?pfs47) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch299 faldo:location ?templateMotifSequenceMatchRegionP97030300 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030302 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916295 .
?templateMotifSequenceMatchRegionP97030300 faldo:begin ?templateMotifSequenceMatchBeginP97030301 .
?templateMotifSequenceMatchBeginP97030301 faldo:position ?templateMotifSequenceMatchBeginPositionP97030296 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030302 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch303 faldo:location ?targetMotifMatchRegionMatch304 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916306 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916297 .
?targetMotifMatchRegionMatch304 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916305 .
?targetMotifMatchRegionMatchBeginMF_00916305 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916298 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916306 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916295, 1, (STRLEN(?templateMotifCigarP97030MF_00916295) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916295, CONCAT('^(?:-*[^-]){', STR(((198 - ?templateMotifSequenceMatchBeginPositionP97030296) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1307) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916297, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916297) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1307), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916297, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916297) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916297, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1307), '}'), '')))), '[^-]', ''))) AS ?step2308) .
BIND(((?step2308 + ?targetMotifMatchRegionMatchBeginPositionMF_00916298) - 1) AS ?thisPositionOn59) .
BIND(?thisPositionOn59 AS ?thisPositionOn60) .
BIND(?this AS ?pfs1t309) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn59))) AS ?pfsb56) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn60))) AS ?pfse57) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn59, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a55')) AS ?annotation55) .
BIND(?this AS ?pfs54) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch314 faldo:location ?templateMotifSequenceMatchRegionP97030315 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030317 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916310 .
?templateMotifSequenceMatchRegionP97030315 faldo:begin ?templateMotifSequenceMatchBeginP97030316 .
?templateMotifSequenceMatchBeginP97030316 faldo:position ?templateMotifSequenceMatchBeginPositionP97030311 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030317 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch318 faldo:location ?targetMotifMatchRegionMatch319 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916321 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916312 .
?targetMotifMatchRegionMatch319 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916320 .
?targetMotifMatchRegionMatchBeginMF_00916320 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916313 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916321 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916310, 1, (STRLEN(?templateMotifCigarP97030MF_00916310) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916310, CONCAT('^(?:-*[^-]){', STR(((214 - ?templateMotifSequenceMatchBeginPositionP97030311) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1322) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916312, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916312) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916312, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1322), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916312, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916312) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916312, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1322), '}'), '')))), '[^-]', ''))) AS ?step2323) .
BIND(((?step2323 + ?targetMotifMatchRegionMatchBeginPositionMF_00916313) - 1) AS ?thisPositionOn66) .
BIND(?thisPositionOn66 AS ?thisPositionOn67) .
BIND(?this AS ?pfs1t324) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn66))) AS ?pfsb63) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn67))) AS ?pfse64) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn66, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a62')) AS ?annotation62) .
BIND(?this AS ?pfs61) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch329 faldo:location ?templateMotifSequenceMatchRegionP97030330 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030332 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916325 .
?templateMotifSequenceMatchRegionP97030330 faldo:begin ?templateMotifSequenceMatchBeginP97030331 .
?templateMotifSequenceMatchBeginP97030331 faldo:position ?templateMotifSequenceMatchBeginPositionP97030326 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030332 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch333 faldo:location ?targetMotifMatchRegionMatch334 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916336 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916327 .
?targetMotifMatchRegionMatch334 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916335 .
?targetMotifMatchRegionMatchBeginMF_00916335 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916328 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916336 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916325, 1, (STRLEN(?templateMotifCigarP97030MF_00916325) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916325, CONCAT('^(?:-*[^-]){', STR(((240 - ?templateMotifSequenceMatchBeginPositionP97030326) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1337) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916327, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916327) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916327, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1337), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916327, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916327) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916327, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1337), '}'), '')))), '[^-]', ''))) AS ?step2338) .
BIND(((?step2338 + ?targetMotifMatchRegionMatchBeginPositionMF_00916328) - 1) AS ?thisPositionOn73) .
BIND(?thisPositionOn73 AS ?thisPositionOn74) .
BIND(?this AS ?pfs1t339) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn73))) AS ?pfsb70) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn74))) AS ?pfse71) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn73, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a69')) AS ?annotation69) .
BIND(?this AS ?pfs68) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch344 faldo:location ?templateMotifSequenceMatchRegionP97030345 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030347 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916340 .
?templateMotifSequenceMatchRegionP97030345 faldo:begin ?templateMotifSequenceMatchBeginP97030346 .
?templateMotifSequenceMatchBeginP97030346 faldo:position ?templateMotifSequenceMatchBeginPositionP97030341 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030347 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch348 faldo:location ?targetMotifMatchRegionMatch349 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916351 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916342 .
?targetMotifMatchRegionMatch349 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916350 .
?targetMotifMatchRegionMatchBeginMF_00916350 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916343 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916351 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916340, 1, (STRLEN(?templateMotifCigarP97030MF_00916340) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916340, CONCAT('^(?:-*[^-]){', STR(((243 - ?templateMotifSequenceMatchBeginPositionP97030341) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1352) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916342, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916342) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916342, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1352), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916342, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916342) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916342, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1352), '}'), '')))), '[^-]', ''))) AS ?step2353) .
BIND(((?step2353 + ?targetMotifMatchRegionMatchBeginPositionMF_00916343) - 1) AS ?thisPositionOn80) .
BIND(?thisPositionOn80 AS ?thisPositionOn81) .
BIND(?this AS ?pfs1t354) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn80))) AS ?pfsb77) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn81))) AS ?pfse78) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn80, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a76')) AS ?annotation76) .
BIND(?this AS ?pfs75) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch359 faldo:location ?templateMotifSequenceMatchRegionP97030360 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030362 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916355 .
?templateMotifSequenceMatchRegionP97030360 faldo:begin ?templateMotifSequenceMatchBeginP97030361 .
?templateMotifSequenceMatchBeginP97030361 faldo:position ?templateMotifSequenceMatchBeginPositionP97030356 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030362 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch363 faldo:location ?targetMotifMatchRegionMatch364 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916366 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916357 .
?targetMotifMatchRegionMatch364 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916365 .
?targetMotifMatchRegionMatchBeginMF_00916365 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916358 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916366 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916355, 1, (STRLEN(?templateMotifCigarP97030MF_00916355) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916355, CONCAT('^(?:-*[^-]){', STR(((247 - ?templateMotifSequenceMatchBeginPositionP97030356) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1367) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916357, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916357) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916357, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1367), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916357, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916357) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916357, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1367), '}'), '')))), '[^-]', ''))) AS ?step2368) .
BIND(((?step2368 + ?targetMotifMatchRegionMatchBeginPositionMF_00916358) - 1) AS ?thisPositionOn87) .
BIND(?thisPositionOn87 AS ?thisPositionOn88) .
BIND(?this AS ?pfs1t369) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn87))) AS ?pfsb84) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn88))) AS ?pfse85) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn87, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a83')) AS ?annotation83) .
BIND(?this AS ?pfs82) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch374 faldo:location ?templateMotifSequenceMatchRegionP97030375 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030377 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916370 .
?templateMotifSequenceMatchRegionP97030375 faldo:begin ?templateMotifSequenceMatchBeginP97030376 .
?templateMotifSequenceMatchBeginP97030376 faldo:position ?templateMotifSequenceMatchBeginPositionP97030371 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030377 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch378 faldo:location ?targetMotifMatchRegionMatch379 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916381 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916372 .
?targetMotifMatchRegionMatch379 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916380 .
?targetMotifMatchRegionMatchBeginMF_00916380 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916373 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916381 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916370, 1, (STRLEN(?templateMotifCigarP97030MF_00916370) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916370, CONCAT('^(?:-*[^-]){', STR(((57 - ?templateMotifSequenceMatchBeginPositionP97030371) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1382) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916372, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916372) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916372, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1382), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916372, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916372) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916372, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1382), '}'), '')))), '[^-]', ''))) AS ?step2383) .
BIND(((?step2383 + ?targetMotifMatchRegionMatchBeginPositionMF_00916373) - 1) AS ?thisPositionOn94) .
BIND(?thisPositionOn94 AS ?thisPositionOn95) .
BIND(?this AS ?pfs1t384) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn94))) AS ?pfsb91) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn95))) AS ?pfse92) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn94, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a90')) AS ?annotation90) .
BIND(?this AS ?pfs89) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch389 faldo:location ?templateMotifSequenceMatchRegionP97030390 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030392 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916385 .
?templateMotifSequenceMatchRegionP97030390 faldo:begin ?templateMotifSequenceMatchBeginP97030391 .
?templateMotifSequenceMatchBeginP97030391 faldo:position ?templateMotifSequenceMatchBeginPositionP97030386 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030392 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch393 faldo:location ?targetMotifMatchRegionMatch394 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916396 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916387 .
?targetMotifMatchRegionMatch394 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916395 .
?targetMotifMatchRegionMatchBeginMF_00916395 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916388 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916396 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916385, 1, (STRLEN(?templateMotifCigarP97030MF_00916385) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916385, CONCAT('^(?:-*[^-]){', STR(((97 - ?templateMotifSequenceMatchBeginPositionP97030386) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1397) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916387, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916387) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916387, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1397), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916387, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916387) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916387, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1397), '}'), '')))), '[^-]', ''))) AS ?step2398) .
BIND(((?step2398 + ?targetMotifMatchRegionMatchBeginPositionMF_00916388) - 1) AS ?thisPositionOn101) .
BIND(?thisPositionOn101 AS ?thisPositionOn102) .
BIND(?this AS ?pfs1t399) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn101))) AS ?pfsb98) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn102))) AS ?pfse99) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn101, 1) = 'C')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a97')) AS ?annotation97) .
BIND(?this AS ?pfs96) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch404 faldo:location ?templateMotifSequenceMatchRegionP97030405 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030407 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916400 .
?templateMotifSequenceMatchRegionP97030405 faldo:begin ?templateMotifSequenceMatchBeginP97030406 .
?templateMotifSequenceMatchBeginP97030406 faldo:position ?templateMotifSequenceMatchBeginPositionP97030401 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030407 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch408 faldo:location ?targetMotifMatchRegionMatch409 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916411 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916402 .
?targetMotifMatchRegionMatch409 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916410 .
?targetMotifMatchRegionMatchBeginMF_00916410 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916403 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916411 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916400, 1, (STRLEN(?templateMotifCigarP97030MF_00916400) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916400, CONCAT('^(?:-*[^-]){', STR(((134 - ?templateMotifSequenceMatchBeginPositionP97030401) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1412) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916402, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916402) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916402, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1412), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916402, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916402) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916402, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1412), '}'), '')))), '[^-]', ''))) AS ?step2413) .
BIND(((?step2413 + ?targetMotifMatchRegionMatchBeginPositionMF_00916403) - 1) AS ?thisPositionOn108) .
BIND(?thisPositionOn108 AS ?thisPositionOn109) .
BIND(?this AS ?pfs1t414) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn108))) AS ?pfsb105) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn109))) AS ?pfse106) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn108, 1) = 'D')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a104')) AS ?annotation104) .
BIND(?this AS ?pfs103) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch419 faldo:location ?templateMotifSequenceMatchRegionP97030420 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030422 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916415 .
?templateMotifSequenceMatchRegionP97030420 faldo:begin ?templateMotifSequenceMatchBeginP97030421 .
?templateMotifSequenceMatchBeginP97030421 faldo:position ?templateMotifSequenceMatchBeginPositionP97030416 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030422 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch423 faldo:location ?targetMotifMatchRegionMatch424 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916426 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916417 .
?targetMotifMatchRegionMatch424 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916425 .
?targetMotifMatchRegionMatchBeginMF_00916425 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916418 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916426 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916415, 1, (STRLEN(?templateMotifCigarP97030MF_00916415) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916415, CONCAT('^(?:-*[^-]){', STR(((152 - ?templateMotifSequenceMatchBeginPositionP97030416) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1427) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916417, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916417) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916417, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1427), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916417, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916417) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916417, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1427), '}'), '')))), '[^-]', ''))) AS ?step2428) .
BIND(((?step2428 + ?targetMotifMatchRegionMatchBeginPositionMF_00916418) - 1) AS ?thisPositionOn115) .
BIND(?thisPositionOn115 AS ?thisPositionOn116) .
BIND(?this AS ?pfs1t429) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn115))) AS ?pfsb112) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn116))) AS ?pfse113) .
FILTER (REGEX('[ST]', SUBSTR(?thisSequenceValue, ?thisPositionOn115, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a111')) AS ?annotation111) .
BIND(?this AS ?pfs110) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch434 faldo:location ?templateMotifSequenceMatchRegionP97030435 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030437 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916430 .
?templateMotifSequenceMatchRegionP97030435 faldo:begin ?templateMotifSequenceMatchBeginP97030436 .
?templateMotifSequenceMatchBeginP97030436 faldo:position ?templateMotifSequenceMatchBeginPositionP97030431 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030437 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch438 faldo:location ?targetMotifMatchRegionMatch439 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916441 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916432 .
?targetMotifMatchRegionMatch439 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916440 .
?targetMotifMatchRegionMatchBeginMF_00916440 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916433 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916441 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916430, 1, (STRLEN(?templateMotifCigarP97030MF_00916430) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916430, CONCAT('^(?:-*[^-]){', STR(((155 - ?templateMotifSequenceMatchBeginPositionP97030431) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1442) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916432, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916432) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916432, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1442), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916432, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916432) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916432, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1442), '}'), '')))), '[^-]', ''))) AS ?step2443) .
BIND(((?step2443 + ?targetMotifMatchRegionMatchBeginPositionMF_00916433) - 1) AS ?thisPositionOn122) .
BIND(?thisPositionOn122 AS ?thisPositionOn123) .
BIND(?this AS ?pfs1t444) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn122))) AS ?pfsb119) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn123))) AS ?pfse120) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn122, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a118')) AS ?annotation118) .
BIND(?this AS ?pfs117) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch449 faldo:location ?templateMotifSequenceMatchRegionP97030450 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030452 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916445 .
?templateMotifSequenceMatchRegionP97030450 faldo:begin ?templateMotifSequenceMatchBeginP97030451 .
?templateMotifSequenceMatchBeginP97030451 faldo:position ?templateMotifSequenceMatchBeginPositionP97030446 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030452 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch453 faldo:location ?targetMotifMatchRegionMatch454 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916456 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916447 .
?targetMotifMatchRegionMatch454 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916455 .
?targetMotifMatchRegionMatchBeginMF_00916455 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916448 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916456 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916445, 1, (STRLEN(?templateMotifCigarP97030MF_00916445) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916445, CONCAT('^(?:-*[^-]){', STR(((158 - ?templateMotifSequenceMatchBeginPositionP97030446) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1457) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916447, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916447) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916447, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916447) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916447, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1457), '}'), '')))), '[^-]', ''))) AS ?step2458) .
BIND(((?step2458 + ?targetMotifMatchRegionMatchBeginPositionMF_00916448) - 1) AS ?thisPositionOn129) .
BIND(?thisPositionOn129 AS ?thisPositionOn130) .
BIND(?this AS ?pfs1t459) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn129))) AS ?pfsb126) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn130))) AS ?pfse127) .
FILTER (REGEX('[ILV]', SUBSTR(?thisSequenceValue, ?thisPositionOn129, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a125')) AS ?annotation125) .
BIND(?this AS ?pfs124) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch464 faldo:location ?templateMotifSequenceMatchRegionP97030465 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030467 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916460 .
?templateMotifSequenceMatchRegionP97030465 faldo:begin ?templateMotifSequenceMatchBeginP97030466 .
?templateMotifSequenceMatchBeginP97030466 faldo:position ?templateMotifSequenceMatchBeginPositionP97030461 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030467 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch468 faldo:location ?targetMotifMatchRegionMatch469 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916471 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916462 .
?targetMotifMatchRegionMatch469 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916470 .
?targetMotifMatchRegionMatchBeginMF_00916470 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916463 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916471 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916460, 1, (STRLEN(?templateMotifCigarP97030MF_00916460) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916460, CONCAT('^(?:-*[^-]){', STR(((169 - ?templateMotifSequenceMatchBeginPositionP97030461) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1472) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916462, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916462) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1472), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916462, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916462) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916462, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1472), '}'), '')))), '[^-]', ''))) AS ?step2473) .
BIND(((?step2473 + ?targetMotifMatchRegionMatchBeginPositionMF_00916463) - 1) AS ?thisPositionOn136) .
BIND(?thisPositionOn136 AS ?thisPositionOn137) .
BIND(?this AS ?pfs1t474) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn136))) AS ?pfsb133) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn137))) AS ?pfse134) .
FILTER (REGEX('[LI]', SUBSTR(?thisSequenceValue, ?thisPositionOn136, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a132')) AS ?annotation132) .
BIND(?this AS ?pfs131) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch479 faldo:location ?templateMotifSequenceMatchRegionP97030480 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030482 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916475 .
?templateMotifSequenceMatchRegionP97030480 faldo:begin ?templateMotifSequenceMatchBeginP97030481 .
?templateMotifSequenceMatchBeginP97030481 faldo:position ?templateMotifSequenceMatchBeginPositionP97030476 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030482 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch483 faldo:location ?targetMotifMatchRegionMatch484 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916486 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916477 .
?targetMotifMatchRegionMatch484 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916485 .
?targetMotifMatchRegionMatchBeginMF_00916485 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916478 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916486 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916475, 1, (STRLEN(?templateMotifCigarP97030MF_00916475) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916475, CONCAT('^(?:-*[^-]){', STR(((216 - ?templateMotifSequenceMatchBeginPositionP97030476) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1487) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916477, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916477) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916477, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1487), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916477, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916477) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916477, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1487), '}'), '')))), '[^-]', ''))) AS ?step2488) .
BIND(((?step2488 + ?targetMotifMatchRegionMatchBeginPositionMF_00916478) - 1) AS ?thisPositionOn143) .
BIND(?thisPositionOn143 AS ?thisPositionOn144) .
BIND(?this AS ?pfs1t489) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn143))) AS ?pfsb140) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn144))) AS ?pfse141) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn143, 1) = 'S')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a139')) AS ?annotation139) .
BIND(?this AS ?pfs138) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch494 faldo:location ?templateMotifSequenceMatchRegionP97030495 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030497 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916490 .
?templateMotifSequenceMatchRegionP97030495 faldo:begin ?templateMotifSequenceMatchBeginP97030496 .
?templateMotifSequenceMatchBeginP97030496 faldo:position ?templateMotifSequenceMatchBeginPositionP97030491 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030497 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch498 faldo:location ?targetMotifMatchRegionMatch499 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916501 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916492 .
?targetMotifMatchRegionMatch499 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916500 .
?targetMotifMatchRegionMatchBeginMF_00916500 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916493 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916501 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916490, 1, (STRLEN(?templateMotifCigarP97030MF_00916490) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916490, CONCAT('^(?:-*[^-]){', STR(((220 - ?templateMotifSequenceMatchBeginPositionP97030491) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1502) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916492, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916492) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916492, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1502), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916492, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916492) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916492, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1502), '}'), '')))), '[^-]', ''))) AS ?step2503) .
BIND(((?step2503 + ?targetMotifMatchRegionMatchBeginPositionMF_00916493) - 1) AS ?thisPositionOn151) .
BIND(?thisPositionOn151 AS ?thisPositionOn152) .
BIND(?this AS ?pfs1t504) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn151))) AS ?pfsb147) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn152))) AS ?pfse148) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn151, 1) = 'Q')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a146')) AS ?annotation146) .
BIND(?this AS ?pfs145) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch509 faldo:location ?templateMotifSequenceMatchRegionP97030510 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030512 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916505 .
?templateMotifSequenceMatchRegionP97030510 faldo:begin ?templateMotifSequenceMatchBeginP97030511 .
?templateMotifSequenceMatchBeginP97030511 faldo:position ?templateMotifSequenceMatchBeginPositionP97030506 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030512 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch513 faldo:location ?targetMotifMatchRegionMatch514 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916516 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916507 .
?targetMotifMatchRegionMatch514 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916515 .
?targetMotifMatchRegionMatchBeginMF_00916515 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916508 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916516 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916505, 1, (STRLEN(?templateMotifCigarP97030MF_00916505) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916505, CONCAT('^(?:-*[^-]){', STR(((222 - ?templateMotifSequenceMatchBeginPositionP97030506) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1517) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916507, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916507) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916507, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1517), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916507, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916507) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916507, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1517), '}'), '')))), '[^-]', ''))) AS ?step2518) .
BIND(((?step2518 + ?targetMotifMatchRegionMatchBeginPositionMF_00916508) - 1) AS ?thisPositionOn159) .
BIND(?thisPositionOn159 AS ?thisPositionOn160) .
BIND(?this AS ?pfs1t519) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn159))) AS ?pfsb155) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn160))) AS ?pfse156) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn159, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a154')) AS ?annotation154) .
BIND(?this AS ?pfs153) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch524 faldo:location ?templateMotifSequenceMatchRegionP97030525 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030527 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916520 .
?templateMotifSequenceMatchRegionP97030525 faldo:begin ?templateMotifSequenceMatchBeginP97030526 .
?templateMotifSequenceMatchBeginP97030526 faldo:position ?templateMotifSequenceMatchBeginPositionP97030521 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030527 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch528 faldo:location ?targetMotifMatchRegionMatch529 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916531 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916522 .
?targetMotifMatchRegionMatch529 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916530 .
?targetMotifMatchRegionMatchBeginMF_00916530 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916523 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916531 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916520, 1, (STRLEN(?templateMotifCigarP97030MF_00916520) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916520, CONCAT('^(?:-*[^-]){', STR(((280 - ?templateMotifSequenceMatchBeginPositionP97030521) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1532) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916522, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916522) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916522, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1532), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916522, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916522) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916522, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1532), '}'), '')))), '[^-]', ''))) AS ?step2533) .
BIND(((?step2533 + ?targetMotifMatchRegionMatchBeginPositionMF_00916523) - 1) AS ?thisPositionOn167) .
BIND(?thisPositionOn167 AS ?thisPositionOn168) .
BIND(?this AS ?pfs1t534) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn167))) AS ?pfsb163) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn168))) AS ?pfse164) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn167, 1) = 'N')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a162')) AS ?annotation162) .
BIND(?this AS ?pfs161) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch539 faldo:location ?templateMotifSequenceMatchRegionP97030540 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030542 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916535 .
?templateMotifSequenceMatchRegionP97030540 faldo:begin ?templateMotifSequenceMatchBeginP97030541 .
?templateMotifSequenceMatchBeginP97030541 faldo:position ?templateMotifSequenceMatchBeginPositionP97030536 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030542 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch543 faldo:location ?targetMotifMatchRegionMatch544 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916546 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916537 .
?targetMotifMatchRegionMatch544 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916545 .
?targetMotifMatchRegionMatchBeginMF_00916545 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916538 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916546 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916535, 1, (STRLEN(?templateMotifCigarP97030MF_00916535) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916535, CONCAT('^(?:-*[^-]){', STR(((281 - ?templateMotifSequenceMatchBeginPositionP97030536) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1547) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916537, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916537) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1547), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916537, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916537) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916537, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1547), '}'), '')))), '[^-]', ''))) AS ?step2548) .
BIND(((?step2548 + ?targetMotifMatchRegionMatchBeginPositionMF_00916538) - 1) AS ?thisPositionOn175) .
BIND(?thisPositionOn175 AS ?thisPositionOn176) .
BIND(?this AS ?pfs1t549) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn175))) AS ?pfsb171) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn176))) AS ?pfse172) .
FILTER (REGEX('[RK]', SUBSTR(?thisSequenceValue, ?thisPositionOn175, 1))) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a170')) AS ?annotation170) .
BIND(?this AS ?pfs169) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch554 faldo:location ?templateMotifSequenceMatchRegionP97030555 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030557 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916550 .
?templateMotifSequenceMatchRegionP97030555 faldo:begin ?templateMotifSequenceMatchBeginP97030556 .
?templateMotifSequenceMatchBeginP97030556 faldo:position ?templateMotifSequenceMatchBeginPositionP97030551 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030557 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch558 faldo:location ?targetMotifMatchRegionMatch559 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916561 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916552 .
?targetMotifMatchRegionMatch559 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916560 .
?targetMotifMatchRegionMatchBeginMF_00916560 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916553 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916561 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916550, 1, (STRLEN(?templateMotifCigarP97030MF_00916550) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916550, CONCAT('^(?:-*[^-]){', STR(((295 - ?templateMotifSequenceMatchBeginPositionP97030551) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1562) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916552, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916552) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916552, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1562), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916552, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916552) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916552, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1562), '}'), '')))), '[^-]', ''))) AS ?step2563) .
BIND(((?step2563 + ?targetMotifMatchRegionMatchBeginPositionMF_00916553) - 1) AS ?thisPositionOn183) .
BIND(?thisPositionOn183 AS ?thisPositionOn184) .
BIND(?this AS ?pfs1t564) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn183))) AS ?pfsb179) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn184))) AS ?pfse180) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn183, 1) = 'R')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a178')) AS ?annotation178) .
BIND(?this AS ?pfs177) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch569 faldo:location ?templateMotifSequenceMatchRegionP97030570 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030572 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916565 .
?templateMotifSequenceMatchRegionP97030570 faldo:begin ?templateMotifSequenceMatchBeginP97030571 .
?templateMotifSequenceMatchBeginP97030571 faldo:position ?templateMotifSequenceMatchBeginPositionP97030566 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030572 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch573 faldo:location ?targetMotifMatchRegionMatch574 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916576 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916567 .
?targetMotifMatchRegionMatch574 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916575 .
?targetMotifMatchRegionMatchBeginMF_00916575 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916568 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916576 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916565, 1, (STRLEN(?templateMotifCigarP97030MF_00916565) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916565, CONCAT('^(?:-*[^-]){', STR(((297 - ?templateMotifSequenceMatchBeginPositionP97030566) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1577) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916567, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916567) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916567, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1577), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916567, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916567) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916567, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1577), '}'), '')))), '[^-]', ''))) AS ?step2578) .
BIND(((?step2578 + ?targetMotifMatchRegionMatchBeginPositionMF_00916568) - 1) AS ?thisPositionOn191) .
BIND(?thisPositionOn191 AS ?thisPositionOn192) .
BIND(?this AS ?pfs1t579) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn191))) AS ?pfsb187) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn192))) AS ?pfse188) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn191, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a186')) AS ?annotation186) .
BIND(?this AS ?pfs185) .
}
OPTIONAL {
?this up:sequence ?thisSequence .
?thisSequence rdf:value ?thisSequenceValue .
?templateMotifMatch584 faldo:location ?templateMotifSequenceMatchRegionP97030585 ;
edam:is_output_of ?templateMotifSequenceProfileAlignmentOperationP97030587 ;
rdf:type edam:data_0869 ;
rdf:value ?templateMotifCigarP97030MF_00916580 .
?templateMotifSequenceMatchRegionP97030585 faldo:begin ?templateMotifSequenceMatchBeginP97030586 .
?templateMotifSequenceMatchBeginP97030586 faldo:position ?templateMotifSequenceMatchBeginPositionP97030581 ;
faldo:reference isoform:P97030-1 .
?templateMotifSequenceProfileAlignmentOperationP97030587 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
?targetMotifMatch588 faldo:location ?targetMotifMatchRegionMatch589 ;
edam:is_output_of ?targetMotifSequenceAlignmentOperationMF_00916591 ;
rdf:type edam:data_0869 ;
rdf:value ?targetMotifMatchCigarP97030MF_00916582 .
?targetMotifMatchRegionMatch589 faldo:begin ?targetMotifMatchRegionMatchBeginMF_00916590 .
?targetMotifMatchRegionMatchBeginMF_00916590 faldo:position ?targetMotifMatchRegionMatchBeginPositionMF_00916583 ;
faldo:reference ?thisSequence .
?targetMotifSequenceAlignmentOperationMF_00916591 edam:has_input signature:MF_00916 ;
rdf:type edam:operation_0300 .
BIND(STRLEN(REPLACE(SUBSTR(?templateMotifCigarP97030MF_00916580, 1, (STRLEN(?templateMotifCigarP97030MF_00916580) - STRLEN(REPLACE(?templateMotifCigarP97030MF_00916580, CONCAT('^(?:-*[^-]){', STR(((298 - ?templateMotifSequenceMatchBeginPositionP97030581) + 1)), '}'), '')))), '[a-z]', '')) AS ?step1592) .
BIND((STRLEN(SUBSTR(?targetMotifMatchCigarP97030MF_00916582, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916582) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916582, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1592), '}'), ''))))) - STRLEN(REPLACE(SUBSTR(?targetMotifMatchCigarP97030MF_00916582, 1, (STRLEN(?targetMotifMatchCigarP97030MF_00916582) - STRLEN(REPLACE(?targetMotifMatchCigarP97030MF_00916582, CONCAT('^(?:[a-z]*(?:[A-Z]|-)){', STR(?step1592), '}'), '')))), '[^-]', ''))) AS ?step2593) .
BIND(((?step2593 + ?targetMotifMatchRegionMatchBeginPositionMF_00916583) - 1) AS ?thisPositionOn199) .
BIND(?thisPositionOn199 AS ?thisPositionOn200) .
BIND(?this AS ?pfs1t594) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn199))) AS ?pfsb195) .
BIND(URI(CONCAT(STR(?thisSequence), '#position', STR(?thisPositionOn200))) AS ?pfse196) .
FILTER ((SUBSTR(?thisSequenceValue, ?thisPositionOn199, 1) = 'K')) .
BIND(URI(CONCAT(STR(?this), '#MF_00916a194')) AS ?annotation194) .
BIND(?this AS ?pfs193) .
}
}
"xsd:string |
